pypi: emma | Projects | Ecosyste.ms: Papers

10.1038/s41598-019-41592-5

A Genome-Wide Analysis of the Penumbral Volume in Inbred Mice following Middle Cerebral Artery Occlusion
Cited by: 1
Author(s): Robert F. Rudy, Nareerat Charoenvimolphan, Baogang Qian, Annerose Berndt, Robert M. Friedlander, Scott T. Weiss, Rose Du
Software Mentions: 12
Published: over 5 years ago

10.1371/journal.pgen.1008748

Polygenic adaptation of rosette growth in Arabidopsis thaliana
Cited by: 19
Author(s): Benedict Wieters, Kim A. Steige, Fei He, Evan Koch, Sebastián E. Ramos-Onsins, Hongya Gu, Ya‐Long Guo, Shamil Sunyaev, Juliette de Meaux
Software Mentions: 11
Published: almost 4 years ago

10.15252/msb.20145123

Natural genetic variation impacts expression levels of coding, non‐coding, and antisense transcripts in fission yeast
Cited by: 61
Author(s): Mathieu Clément-Ziza, Xavi Marsellach, Sandra Codlin, Manos A. Papadakis, Susanne Reinhardt, María Rodríguez-López, Stuart Martin, Samuel Marguerat, Alexander Schmidt, Eun‐Hye Lee, Christopher T. Workman, Jürg Bähler, Andreas Beyer
Software Mentions: 5
Published: about 10 years ago

10.1371/journal.pgen.1008123

Mouse genome-wide association and systems genetics identifies Lhfp as a regulator of bone mass
Cited by: 19
Author(s): Larry D. Mesner, Gina M. Calabrese, Basel M. Al‐Barghouthi, Daniel M. Gatti, John P. Sundberg, Gary A. Churchill, Dana A. Godfrey, Cheryl Ackert‐Bicknell, Charles R. Farber
Software Mentions: 5
Published: over 5 years ago

10.1107/S205979831801570X

Choosing your (Friedel) mates wisely: grouping data sets to improve anomalous signal
Cited by: 6
Author(s): Nicolas Foos, Michele Cianci, Max H. Nanao
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pcbi.1009372

FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution
Cited by: 8
Author(s): Gabriel A. Vignolle, Denise Schaffer, Leopold Zehetner, Robert L. Mach, Astrid R. Mach-Aigner, Christian Derntl
Software Mentions: 4
Published: about 3 years ago

10.1371/journal.pgen.1008805

Genetic analysis of osteoblast activity identifies Zbtb40 as a regulator of osteoblast activity and bone mass
Cited by: 11
Author(s): Madison L. Doolittle, Gina M. Calabrese, Larry D. Mesner, Dana A. Godfrey, Robert Maynard, Cheryl Ackert‐Bicknell, Charles R. Farber
Software Mentions: 4
Published: over 4 years ago

10.7554/eLife.48220

Extensive intraspecies cryptic variation in an ancient embryonic gene regulatory network
Cited by: 19
Author(s): Yamila N. Torres Cleuren, Chee Kiang Ewe, Kyle C. Chipman, Emily Mears, Cricket G. Wood, Coco Emma Alma Al-Alami, Melissa R. Alcorn, Thomas L. Turner, Pradeep M. Joshi, Russell G. Snell, Joel H. Rothman
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pgen.1000796

Genomic Hotspots for Adaptation: The Population Genetics of Müllerian Mimicry in Heliconius erato
Cited by: 103
Author(s): Brian A. Counterman, Félix Araújo-Pérez, Heather M. Hines, Simon W. Baxter, Clay Morrison, Daniel P. Lindstrom, Riccardo Papa, Laura Ferguson, Mathieu Joron, Richard H. ffrench-Constant, Christopher P. Smith, Dahlia M. Nielsen, Rui Chen, Chris D. Jiggins, Robert D. Reed, Georg Halder, James Mallet, W. Owen McMillan
Software Mentions: 3
Published: almost 15 years ago

10.1186/1751-0473-8-17

GEMBASSY: an EMBOSS associated software package for comprehensive genome analyses
Cited by: 13
Author(s): Hidetoshi Itaya, Kazuki Oshita, Kazuharu Arakawa, Masaru Tomita
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.pone.0193499

Genomic and transcriptomic comparison of allergen and silver nanoparticle-induced mast cell degranulation reveals novel non-immunoglobulin E mediated mechanisms
Cited by: 12
Author(s): Micah A. Johnson, Nasser B. Alsaleh, Ryan Mendoza, Indushekhar Persaud, Alison K. Bauer, Laura Saba, Jared M. Brown
Software Mentions: 3
Published: almost 7 years ago

10.1186/1297-9686-44-32

Statistical distributions of test statistics used for quantitative trait association mapping in structured populations
Cited by: 16
Author(s): Simon Teyssèdre, Jean Michel J. M. Elsen, Anne Ricard
Software Mentions: 3
Published: about 12 years ago

10.1186/1471-2164-8-426

e-Fungi: a data resource for comparative analysis of fungal genomes
Cited by: 29
Author(s): Cornelia Hedeler, Han Min Wong, Michael Cornell, Intikhab Álam, Darren M. Soanes, Magnus Rattray, Simon J. Hubbard, Nicholas J. Talbot, Stephen G. Oliver, Norman W. Paton
Software Mentions: 3
Published: almost 18 years ago

10.1371/journal.pone.0110436

Genome-Wide Prediction Methods in Highly Diverse and Heterozygous Species: Proof-of-Concept through Simulation in Grapevine
Cited by: 34
Author(s): Ágota Fodor, Vincent Segura, Marie Denis, Samuel Neuenschwander, Alexandre Fournier‐Level, Philippe Chatelet, Félix Homa, Thierry Lacombe, Patrice This, Loïc Le Cunff
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0075611

Genetic Control of Spontaneous Arthritis in a Four-Way Advanced Intercross Line
Cited by: 3
Author(s): Laura Mellado Ranea, António Marques, Steffen Möller, Yask Gupta, Saleh M. Ibrahim
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pone.0037142

Selective Enrichment and Sequencing of Whole Mitochondrial Genomes in the Presence of Nuclear Encoded Mitochondrial Pseudogenes (Numts)
Cited by: 29
Author(s): Jonci N. Wolff, Deborah Shearman, Robert Brooks, J. William O. Ballard
Software Mentions: 2
Published: over 12 years ago

10.1155/2010/319486

Complete Mitochondrial Genome Sequence of<i>Acrida cinerea</i>(Acrididae: Orthoptera) and Comparative Analysis of Mitochondrial Genomes in Orthoptera
Cited by: 10
Author(s): Nian Liu, Yuan Huang
Software Mentions: 2
Published: almost 15 years ago

10.1186/2041-1480-2-S1-S5

Semantics-based composition of EMBOSS services
Cited by: 53
Author(s): Anna-Lena Lamprecht, Stefan Naujokat, Tiziana Margaria, Bernhard Steffen
Software Mentions: 2
Published: almost 14 years ago

10.1107/S2059798321004538

Likelihood-based estimation of substructure content from single-wavelength anomalous diffraction (SAD) intensity data
Cited by: 1
Author(s): Kaushik Hatti, Airlie J. McCoy, Randy J. Read
Software Mentions: 2
Published: over 3 years ago

10.2196/15741

A Digital Companion, the Emma App, for Ecological Momentary Assessment and Prevention of Suicide: Quantitative Case Series Study
Cited by: 20
Author(s): Margot Morgiève, C. Genty, Jérôme Azé, Jonathan Dubois, Marion Leboyer, Guillaume Vaïva, Sofian Berrouiguet, Philippe Courtet
Software Mentions: 2
Published: about 4 years ago

10.1186/s12870-016-0829-x

Genome-wide association mapping of quantitative traits in a breeding population of sugarcane
Cited by: 59
Author(s): Josefina Racedo, Lucı́a Gutiérrez, María Francisca Perera, Santiago Ostengo, Esteban Mariano Pardo, María Inés Cuenya, Björn Welin, Atilio Pedro Castagnaro
Software Mentions: 2
Published: over 8 years ago

10.1186/s13100-020-00220-0

Evolution of pogo, a separate superfamily of IS630-Tc1-mariner transposons, revealing recurrent domestication events in vertebrates
Cited by: 40
Author(s): Bo Gao, Yali Wang, Mohamed Diaby, Wencheng Zong, Dan Shen, Saisai Wang, Cai Chen, Xiaoyan Wang, Chengyi Song
Software Mentions: 2
Published: over 4 years ago

10.1098/rstb.2015.0404

Heterotaxy in<i>Caenorhabditis</i>: widespread natural variation in left–right arrangement of the major organs
Cited by: 7
Author(s): Melissa R. Alcorn, Davon C. Callander, Agustín López-Santos, Yamila N. Torres Cleuren, Bilge Birsoy, Pradeep M. Joshi, Anna W. Santure, Joel H. Rothman
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pbio.3000597

Selective sweeps on novel and introgressed variation shape mimicry loci in a butterfly adaptive radiation
Cited by: 60
Author(s): Markus Moest, Steven M. Van Belleghem, Jennifer E. James, Camilo Salazar, Simon H. Martin, Sarah L. Barker, Gilson R. P. Moreira, Claire Mérot, Mathieu Joron, Nicola J. Nadeau, Florian M. Steiner, Chris D. Jiggins
Software Mentions: 2
Published: almost 5 years ago

10.7554/eLife.09178

Wild worm embryogenesis harbors ubiquitous polygenic modifier variation
Cited by: 72
Author(s): Annalise B. Paaby, Andrew White, David D. Riccardi, Kristin C. Gunsalus, Fabio Piano, Matthew V. Rockman
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2148-9-298

Phylogenetic analysis and temporal diversification of mosquitoes (Diptera: Culicidae) based on nuclear genes and morphology
Cited by: 168
Author(s): Kyanne R. Reidenbach, Shelley Cook, Matthew A. Bertone, Ralph E. Harbach, Brian M. Wiegmann, Nora J. Besansky
Software Mentions: 2
Published: about 15 years ago

10.1186/1471-2105-10-S10-S8

Bio-jETI: a framework for semantics-based service composition
Cited by: 59
Author(s): Anna-Lena Lamprecht, Tiziana Margaria, Bernhard Steffen
Software Mentions: 2
Published: about 15 years ago

Ecosyste.ms: Papers

Projects: pypi: emma

Papers Mentioning emma 27