Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: edition
https://packages.ecosyste.ms/registries/pypi.org/packages/edition
Creates beautiful HTML and Markdown editions of your documentation
14 versions
Latest release: almost 3 years ago
57 downloads last month
Papers Mentioning edition 30
10.1186/s12859-020-3520-z
miRTissue ce: extending miRTissue web service with the analysis of ceRNA-ceRNA interactionsCited by: 13
Author(s): Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
Software Mentions: 4
Published: about 4 years ago
10.1097/MD.0000000000025756
Uracil-tegafur vs fluorouracil as postoperative adjuvant chemotherapy in Stage II and III colon cancerCited by: 1
Author(s): Po-Huang Chen, Yi‐Ying Wu, Chien-Hsing Lee, Chi‐Hsiang Chung, Yuguang Chen, Tseng Huang, Ren-Hua Yeh, Ping‐Ying Chang, Ming–Shen Dai, Shiue‐Wei Lai, Ching–Liang Ho, Jiahong Chen, Yeu‐Chin Chen, Je-Ming Hu, Sung-Sen Yang, Wu-Chien Chien
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0251911
Constitutive activation of CTNNB1 results in a loss of spermatogonial stem cell activity in miceCited by: 11
Author(s): Alexandre Boyer, Xiangfan Zhang, Adrien Levasseur, Nour Abou Nader, G St-Jean, Makoto Nagano, Derek Boerboom
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pntd.0004626
Reproductive Incompatibility Involving Senegalese Aedes aegypti (L) Is Associated with Chromosome RearrangementsCited by: 21
Author(s): Laura B. Dickson, Maria V. Sharakhova, Vladimir A. Timoshevskiy, Karen Fleming, Alex Caspary, Massamba Sylla, William C. Black
Software Mentions: 4
Published: over 8 years ago
10.3389/fcell.2020.00386
1Q12 Loci Movement in the Interphase Nucleus Under the Action of ROS Is an Important Component of the Mechanism That Determines Copy Number Variation of Satellite III (1q12) in Health and SchizophreniaCited by: 9
Author(s): Marina S. Konkova, Elizaveta S. Ershova, Ekaterina A. Savinova, Elena M. Malinovskaya, Galina Shmarina, А. В. Мартынов, Roman V. Veiko, Natalia V. Zakharova, Pavel E. Umriukhin, G. P. Kostyuk, В. Л. Ижевская, Sergey I. Kutsev, Natalia N. Veiko, Svetlana V. Kostyuk
Software Mentions: 3
Published: over 4 years ago
10.1038/srep09207
miRNA in situ hybridization in circulating tumor cells - MishCTCCited by: 36
Author(s): Francisco G. Ortega, José A. Lorente, José Luis García Puche, Maria P. Ruiz, Rosario M. Sánchez‐Martín, Diego Pérez, Juan José Díaz‐Mochón, María José Serrano
Software Mentions: 3
Published: over 9 years ago
10.3390/cells9040889
Proton Irradiation Increases the Necessity for Homologous Recombination Repair Along with the Indispensability of Non-Homologous End JoiningCited by: 30
Author(s): Klaudia Szymonowicz, A. Krysztofiak, Jansje van der Linden, A. Kern, Simon Deycmar, Sebastian Oeck, Anthony Squire, Benjamin Koska, Julian Hlouschek, Melanie Vüllings, Christian Neander, Jens T. Siveke, Johann Matschke, Martin Pruschy, Beate Timmermann, Verena Jendrossek
Software Mentions: 3
Published: over 4 years ago
10.1038/s42003-019-0336-3
Mesenchymal actomyosin contractility is required for androgen-driven urethral masculinization in miceCited by: 12
Author(s): Alvin R. Acebedo, Kentaro Suzuki, Shinjiro Hino, Mellissa C. Alcantara, Yuki Sato, Hisashi Haga, Ken Matsumoto, Mitsuyoshi Nakao, Kenji Shimamura, Takeo Tanaka, Naomi Nakagata, Shinichi Miyagawa, Ryuichi Nishinakamura, Robert S. Adelstein, Gen Yamada
Software Mentions: 3
Published: over 5 years ago
10.1186/s12991-018-0217-z
Resting-state brain activity in Chinese boys with low functioning autism spectrum disorderCited by: 13
Author(s): Gaizhi Li, Kathryn Rossbach, Wenqing Jiang, Yasong Du
Software Mentions: 2
Published: about 6 years ago
10.1186/s12880-020-00480-5
Evaluation of a novel lower radiation computed tomography protocol for assessment of tunnel position post anterior cruciate ligament reconstructionCited by: 2
Author(s): Varun Vasudeva, Stephen Key, Alfred Phillips, Steve Kahane, Joseph Stevens, Christopher J. Wall, Price Gallie
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0159800
Dearth and Delayed Maturation of Testicular Germ Cells in Fanconi Anemia E Mutant Male MiceCited by: 4
Author(s): Chun Fu, Khurshida Begum, Philip W. Jordan, Yan He, Paul A. Overbeek
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0124836
A Conserved Function in Phosphatidylinositol Metabolism for Mammalian Vps13 Family ProteinsCited by: 24
Author(s): Jae-Sook Park, Simon Halegoua, Shosei Kishida, Aaron M. Neiman
Software Mentions: 2
Published: over 9 years ago
10.12688/f1000research.19161.2
Development of an informatics system for accelerating biomedical research.Cited by: 4
Author(s): Vivek Navale, Michele Ji, Olga Vovk, Leonie Misquitta, Tsega Gebremichael, Alison Garcia, Yang C. Fann, Matthew J. McAuliffe
Software Mentions: 2
Published: over 4 years ago
10.3389/fpsyt.2021.705554
Advancing Autism Research From Mice to Marmosets: Behavioral Development of Offspring Following Prenatal Maternal Immune ActivationCited by: 8
Author(s): Danielle Santana‐Coelho, Donna Layne-Colon, Roslyn Valdespino, Corinna C Ross, Suzette D. Tardif, Jason C. O’Connor
Software Mentions: 2
Published: over 3 years ago
10.1534/g3.116.029462
Genetic Interactions Between the Meiosis-Specific Cohesin Components, STAG3, REC8, and RAD21LCited by: 44
Author(s): Ayobami Ward, Jessica Hopkins, Matthew J. McKay, Stephen A. Murray, Philip W. Jordan
Software Mentions: 2
Published: over 8 years ago
10.1128/mSystems.00866-20
Elucidating the Diversity and Potential Function of Nonribosomal Peptide and Polyketide Biosynthetic Gene Clusters in the Root MicrobiomeCited by: 10
Author(s): Barak Dror, Zongqiang Wang, Sean F. Brady, Édouard Jurkevitch, Eddie Cytryn
Software Mentions: 2
Published: almost 4 years ago
10.1155/2021/5511841
Robust Plasma Cell Response to Skin-Inoculated Dengue Virus in MiceCited by: 0
Author(s): Raúl Antonio Maqueda-Alfaro, Edith Marcial‐Juárez, Juana Calderón‐Amador, Julio García‐Cordero, Mariana C Orozco-Uribe, Felipe Hernández-Cázares, Uziel Medina-Pérez, Luvia Enid Sánchez-Torres, Adriana Flores‐Langarica, Leticia Cedillo‐Barrón, Juan Carlos Yam‐Puc, Leopoldo Flores‐Romo
Software Mentions: 2
Published: over 3 years ago
10.7554/eLife.61171
SMC5/6 is required for replication fork stability and faithful chromosome segregation during neurogenesisCited by: 9
Author(s): Alisa Atkins, Michelle J Xu, Maggie Li, Nathaniel P Rogers, Marina V. Pryzhkova, Philip W. Jordan
Software Mentions: 2
Published: about 4 years ago
10.3390/ijms22105062
MIT-001 Restores Human Placenta-Derived Mesenchymal Stem Cells by Enhancing Mitochondrial Quiescence and Cytoskeletal OrganizationCited by: 4
Author(s): Won Dong Yu, Yu Jin Kim, Min Jeong Cho, Gi Jin Kim, Soon Ha Kim, Myung‐Joo Kim, Jung Jae Ko, Jae Ho Lee
Software Mentions: 2
Published: over 3 years ago
10.1186/s40064-016-2935-5
The effects of data-driven learning activities on EFL learners’ writing developmentCited by: 25
Author(s): Qinqin Luo
Software Mentions: 1
Published: over 8 years ago
10.1089/neu.2018.5660
Neutralization of Interleukin-1β following Diffuse Traumatic Brain Injury in the Mouse Attenuates the Loss of Mature OligodendrocytesCited by: 33
Author(s): Johanna Flygt, Karsten Ruscher, Amanda Norberg, Anis K. Mir, Hermann Gram, Fredrik Clausen, Niklas Marklund
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12890-021-01442-5
Recovery of physical function in lung transplant recipients with sarcopeniaCited by: 9
Author(s): Etsuhiro Nikkuni, Takashi Hirama, Kazuki Hayasaka, Sakiko Kumata, Shinichi Kotan, Yui Watanabe, Hisashi Oishi, Hiromichi Niikawa, Masahiro Kohzuki, Yoshinori Okada
Software Mentions: 1
Published: over 3 years ago
10.1038/srep30386
Prostate-specific extracellular vesicles as a novel biomarker in human prostate cancerCited by: 65
Author(s): Yong Hyun Park, Hyun Woo Shin, Ae Ryang Jung, Oh Sung Kwon, Yeong-Jin Choi, Jaesung Park, Ji Youl Lee
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0024616
LEDGF1-326 Decreases P23H and Wild Type Rhodopsin Aggregates and P23H Rhodopsin Mediated Cell Damage in Human Retinal Pigment Epithelial CellsCited by: 7
Author(s): Rinku Baid, Robert I. Scheinman, Toshimichi Shinohara, D. P. Singh, Uday B. Kompella
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0165081
Plasma miRNA Profiles in Pregnant Women Predict Infant Outcomes following Prenatal Alcohol ExposureCited by: 58
Author(s): Sridevi Balaraman, Jordan J. Schafer, Alexander M. Tseng, Wladimir Wertelecki, Lyubov Yevtushok, Natalya Zymak‐Zakutnya, Christina D. Chambers, Rajesh C. Miranda
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pgen.1004413
Meiosis-Specific Cohesin Component, Stag3 Is Essential for Maintaining Centromere Chromatid Cohesion, and Required for DNA Repair and Synapsis between Homologous ChromosomesCited by: 97
Author(s): Jessica Hopkins, Grace H. Hwang, Jovitta Jacob, Nicklas Sapp, Rick Bedigian, Koichiro Oka, Paul A. Overbeek, Stephen A. Murray, Philip W. Jordan
Software Mentions: 1
Published: over 10 years ago
10.1038/s41598-017-17961-3
Misato underlies visceral myopathy in DrosophilaCited by: 5
Author(s): Soohong Min, Woongchang Yoon, Hyunho Cho, Jongkyeong Chung
Software Mentions: 1
Published: almost 7 years ago
10.3389/fnagi.2021.646017
Alterations in Dynamic Functional Connectivity in Individuals With Subjective Cognitive DeclineCited by: 18
Author(s): Qian Chen, Jiaming Lu, Xin Zhang, Yi Sun, Wenqian Chen, Xin Li, Wen Zhang, Zhao Qing, Bing Zhang
Software Mentions: 1
Published: almost 4 years ago
10.3390/biom10050773
Isorhamnetin: A Nematocidal Flavonoid from Prosopis laevigata Leaves Against Haemonchus contortus Eggs and LarvaeCited by: 25
Author(s): Edgar Jesús Delgado-Núñez, Alejandro Zamilpa, Manasés González-Cortazar, Agustín Olmedo-Juárez, Alexandre Cardoso-Taketa, Ernesto Sánchez-Mendoza, Daniel Tapia‐Maruri, David Osvaldo Salinas-Sánchez, Pedro Mendoza de Gives
Software Mentions: 1
Published: over 4 years ago
10.3389/fnins.2018.00544
C. elegans MANF Homolog Is Necessary for the Protection of Dopaminergic Neurons and ER Unfolded Protein ResponseCited by: 29
Author(s): Cory Richman, S. Tamir Rashid, Shreya Prashar, Ram K. Mishra, Selvaganapathy Pr, Bhagwati Gupta
Software Mentions: 1
Published: over 6 years ago