Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: dropSeqPipe
https://packages.ecosyste.ms/registries/pypi.org/packages/dropSeqPipe
A drop-seq pipeline
2 versions
Latest release: over 7 years ago
15 downloads last month
Papers Mentioning dropSeqPipe 4
10.1371/journal.pcbi.1006361
scPipe: A flexible R/Bioconductor preprocessing pipeline for single-cell RNA-sequencing dataCited by: 92
Author(s): Tian Li, Shian Su, Xueyi Dong, Daniela Amann‐Zalcenstein, Christine Biben, Azadeh Seidi, Douglas J. Hilton, Shalin H. Naik, Matthew E. Ritchie
Software Mentions: 21
Published: over 6 years ago
10.7554/eLife.68603
Ferroptotic stress promotes the accumulation of pro-inflammatory proximal tubular cells in maladaptive renal repairCited by: 49
Author(s): Shintaro Ide, Yoshihiko Kobayashi, Kana Ide, Sarah A. Strausser, Koki Abe, Savannah Herbek, Lori L. O’Brien, Steven D. Crowley, Laura Barisoni, Aleksandra Tata, Purushothama Rao Tata, Tomokazu Souma
Software Mentions: 5
Published: over 3 years ago
10.1186/s12915-021-01122-0
Single-cell analysis of cell fate bifurcation in the chordate CionaCited by: 4
Author(s): Konner Winkley, Wendy Reeves, Michael Veeman
Software Mentions: 4
Published: over 3 years ago
10.1186/s12864-018-5249-x
ddSeeker: a tool for processing Bio-Rad ddSEQ single cell RNA-seq dataCited by: 20
Author(s): Dario Romagnoli, Giulia Boccalini, Martina Bonechi, Chiara Biagioni, Paola Fassan, Roberto Bertorelli, Veronica De Sanctis, Angelo Di Leo, Ilenia Migliaccio, Luca Malorni, Matteo Benelli
Software Mentions: 2
Published: about 6 years ago