Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: dotplot

https://packages.ecosyste.ms/registries/pypi.org/packages/dotplot

Small bioinformatic package for dotplot's generation (in command line and in GUI)
5 versions
Latest release: over 7 years ago
31 downloads last month

Papers Mentioning dotplot 8

Ramf: An Open-Source R Package for Statistical Analysis and Display of Quantitative Root Colonization by Arbuscular Mycorrhiza Fungi
Cited by: 2
Author(s): Marco Chiapello, Debatosh Das, Caroline Gutjahr
Software Mentions: 6
Published: about 5 years ago

10.1186/s12864-019-6087-1

Α de novo 3.8-Mb inversion affecting the EDA and XIST genes in a heterozygous female calf with generalized hypohidrotic ectodermal dysplasia
Cited by: 5
Author(s): Clémentine Escouflaire, Emmanuelle Rebours, Mathieu Charles, Sébastien Orellana, Margarita Cano, Julie Rivière, Cécile Grohs, Hélène Hayes, Aurélien Capitan
Software Mentions: 2
Published: about 5 years ago

10.1111/jcmm.15357

CMap analysis identifies Atractyloside as a potential drug candidate for type 2 diabetes based on integration of metabolomics and transcriptomics
Cited by: 9
Author(s): Hailong Li, Xiaodong Shi, Hua Jiang, Junren Kang, Miao Yu, Qifei Li, Kang Yu, Zhengju Chen, Hui Pan, Wei Chen
Software Mentions: 2
Published: over 4 years ago

10.1186/s41065-019-0081-0

The evolution of transcriptional repressors in the Notch signaling pathway: a computational analysis
Cited by: 15
Author(s): Dieter Maier
Software Mentions: 2
Published: almost 6 years ago

10.1186/1471-2105-7-477

Browsing repeats in genomes: Pygram and an application to non-coding region analysis
Cited by: 19
Author(s): Patrick Durand, Frédéric Mahé, Anne-Sophie Valin, Jacques Nicolas
Software Mentions: 2
Published: about 18 years ago

10.1534/g3.117.040345

FlyExpress 7: An Integrated Discovery Platform To Study Coexpressed Genes Using<i>in Situ</i>Hybridization Images in<i>Drosophila</i>
Cited by: 3
Author(s): Sudhir Kumar, Charlotte E. Konikoff, Maxwell Sanderford, Li Liu, Stuart J. Newfeld, Jieping Ye, Rob J. Kulathinal
Software Mentions: 1
Published: over 7 years ago

10.1186/1743-422X-2-30

Host-derived pathogenicity islands in poxviruses
Cited by: 7
Author(s): Melissa Da Silva, Chris Upton
Software Mentions: 1
Published: over 19 years ago

10.1186/s12864-015-1992-4

A comprehensive mapping of the structure and gene organisation in the sheep MHC class I region
Cited by: 4
Author(s): N. Siva Subramaniam, E. Morgan, J. D. Wetherall, M. J. Stear, D. M. Groth
Software Mentions: 1
Published: about 9 years ago