Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: deconf
https://packages.ecosyste.ms/registries/pypi.org/packages/deconf
An object system for building declarative configurations in Python.
2 versions
Latest release: over 11 years ago
18 downloads last month
Papers Mentioning deconf 7
10.1038/s41392-021-00729-7
Technological advances in cancer immunity: from immunogenomics to single-cell analysis and artificial intelligenceCited by: 34
Author(s): Ying Xu, Guan-Hua Su, Ding Ma, Yi Xiao, Zhi-Ming Shao
Software Mentions: 8
Published: over 3 years ago
10.3389/fgene.2020.00392
DeconPeaker, a Deconvolution Model to Identify Cell Types Based on Chromatin Accessibility in ATAC-Seq Data of Mixture SamplesCited by: 20
Author(s): Huamei Li, Ingo G. H. Schmidt‐Wolf, Kun Luo, Zhaohui S. Qin, Xiao Sun, Hongde Liu
Software Mentions: 5
Published: over 4 years ago
10.1186/s13059-016-1062-5
CellMapper: rapid and accurate inference of gene expression in difficult-to-isolate cell typesCited by: 17
Author(s): Brad Nelms, Levi Waldron, Luis Barrera, Andrew W. Weflen, Jeremy A. Goettel, Guoji Guo, Robert K. Montgomery, Marian R. Neutra, David T. Breault, Scott B. Snapper, Stuart H. Orkin, Martha L. Bulyk, Curtis Huttenhower, Wayne I. Lencer
Software Mentions: 4
Published: about 8 years ago
10.1186/s13059-019-1778-0
TOAST: improving reference-free cell composition estimation by cross-cell type differential analysisCited by: 39
Author(s): Ziyi Li, Hao Wu
Software Mentions: 4
Published: about 5 years ago
10.1371/journal.pcbi.1007510
CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression dataCited by: 39
Author(s): Kai Kang, Qian Meng, Igor Shats, David M. Umbach, Melissa Li, Yuanyuan Li, Xiaoling Li, Leping Li
Software Mentions: 4
Published: almost 5 years ago
10.1371/journal.pone.0193067
Computational de novo discovery of distinguishing genes for biological processes and cell types in complex tissuesCited by: 13
Author(s): Lee A. Newberg, Xiaowei Chen, Chinnappa D. Kodira, Maria I. Zavodszky
Software Mentions: 3
Published: over 6 years ago
10.1007/s00262-018-2150-z
Quantifying tumor-infiltrating immune cells from transcriptomics dataCited by: 258
Author(s): Francesca Finotello, Zlatko Trajanoski
Software Mentions: 3
Published: over 6 years ago