Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: deconf

https://packages.ecosyste.ms/registries/pypi.org/packages/deconf

An object system for building declarative configurations in Python.
2 versions
Latest release: over 11 years ago
18 downloads last month

Papers Mentioning deconf 7

Technological advances in cancer immunity: from immunogenomics to single-cell analysis and artificial intelligence
Cited by: 34
Author(s): Ying Xu, Guan-Hua Su, Ding Ma, Yi Xiao, Zhi-Ming Shao
Software Mentions: 8
Published: about 3 years ago

10.3389/fgene.2020.00392

DeconPeaker, a Deconvolution Model to Identify Cell Types Based on Chromatin Accessibility in ATAC-Seq Data of Mixture Samples
Cited by: 20
Author(s): Huamei Li, Ingo G. H. Schmidt‐Wolf, Kun Luo, Zhaohui S. Qin, Xiao Sun, Hongde Liu
Software Mentions: 5
Published: over 4 years ago

10.1186/s13059-016-1062-5

CellMapper: rapid and accurate inference of gene expression in difficult-to-isolate cell types
Cited by: 17
Author(s): Brad Nelms, Levi Waldron, Luis Barrera, Andrew W. Weflen, Jeremy A. Goettel, Guoji Guo, Robert K. Montgomery, Marian R. Neutra, David T. Breault, Scott B. Snapper, Stuart H. Orkin, Martha L. Bulyk, Curtis Huttenhower, Wayne I. Lencer
Software Mentions: 4
Published: about 8 years ago

10.1186/s13059-019-1778-0

TOAST: improving reference-free cell composition estimation by cross-cell type differential analysis
Cited by: 39
Author(s): Ziyi Li, Hao Wu
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pcbi.1007510

CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression data
Cited by: 39
Author(s): Kai Kang, Qian Meng, Igor Shats, David M. Umbach, Melissa Li, Yuanyuan Li, Xiaoling Li, Leping Li
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0193067

Computational de novo discovery of distinguishing genes for biological processes and cell types in complex tissues
Cited by: 13
Author(s): Lee A. Newberg, Xiaowei Chen, Chinnappa D. Kodira, Maria I. Zavodszky
Software Mentions: 3
Published: over 6 years ago

10.1007/s00262-018-2150-z

Quantifying tumor-infiltrating immune cells from transcriptomics data
Cited by: 258
Author(s): Francesca Finotello, Zlatko Trajanoski
Software Mentions: 3
Published: over 6 years ago