Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: database

https://packages.ecosyste.ms/registries/pypi.org/packages/database

Python database connectivity supporting portable SQL mode
1 version
Latest release: about 1 year ago
1 dependent package

Papers Mentioning database 12

Transcriptional profiling of predator-induced phenotypic plasticity in Daphnia pulex
Cited by: 33
Author(s): Andrey Rozenberg, Mrutyunjaya Parida, Florian Leese, Linda C. Weiss, Ralph Tollrian, J. Robert Manak
Software Mentions: 5
Published: over 9 years ago

10.1186/s13104-019-4210-7

Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
Cited by: 11
Author(s): Joeri Kalter, Maike G. Sweegers, Irma M. Verdonck‐de Leeuw, Johannes Brug, Laurien M. Buffart
Software Mentions: 5
Published: over 5 years ago

10.1128/mSystems.00299-20

Expanded Phylogenetic Diversity and Metabolic Flexibility of Mercury-Methylating Microorganisms
Cited by: 44
Author(s): Elizabeth A. McDaniel, Brittany F. Peterson, Sarah Stevens, Patricia Q. Tran, Karthik Anantharaman, Katherine D. McMahon
Software Mentions: 4
Published: about 4 years ago

10.1186/s12891-015-0745-5

Genome-wide DNA methylation study of hip and knee cartilage reveals embryonic organ and skeletal system morphogenesis as major pathways involved in osteoarthritis
Cited by: 41
Author(s): Erfan Aref‐Eshghi, Yuhua Zhang, Ming Liu, Patricia E. Harper, Glynn Martin, Andrew Furey, Roger Green, Guang Sun, Proton Rahman, Guangju Zhai
Software Mentions: 3
Published: about 9 years ago

10.7717/peerj.1839

Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies
Cited by: 86
Author(s): Tom O. Delmont, A. Murat Eren
Software Mentions: 3
Published: over 8 years ago

10.1140/epjc/s10052-020-8076-6

Reinterpreting the results of the LHC with MadAnalysis 5: uncertainties and higher-luminosity estimates
Cited by: 28
Author(s): Jack Y. Araz, Mariana Frank, Benjamin Fuks
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pbio.2000698

Pharmacogenomic identification of small molecules for lineage specific manipulation of subventricular zone germinal activity
Cited by: 40
Author(s): Kasum Azim, Diane Angonin, Guillaume Marcy, Francesca Pieropan, Andrea Rivera, Vanessa Donega, Claudio Cantù, Gareth Williams, Benedikt Berninger, Arthur M. Butt, Olivier Raineteau
Software Mentions: 1
Published: over 7 years ago

10.1186/s12936-019-3093-3

Identification of Plasmodium falciparum proteoforms from liver stage models
Cited by: 2
Author(s): Benjamin Y. Winer, Kimberly A. Edgel, Xiaoyan Zou, Julie Sellau, Sri Hadiwidjojo, Lindsey S. Garver, Christin E. McDonough, Neil L. Kelleher, Paul M. Thomas, Eileen Villasante, Alexander Ploß, Vincent R. Gerbasi
Software Mentions: 1
Published: almost 5 years ago

10.1089/cmb.2019.0443

Drug-Target Interaction Network Analysis of Gene-Phenotype Connectivity Maintained by Genistein
Cited by: 3
Author(s): Baoshan Li, Yi Jiang, Jingxin Chu, Qian Zhou
Software Mentions: 1
Published: almost 4 years ago

10.1038/srep46137

Genome-wide identification, characterization, and expression profile of aquaporin gene family in flax (Linum usitatissimum)
Cited by: 79
Author(s): S. M. Shivaraj, Rupesh Deshmukh, Rhitu Rai, Richard R. Bélanger, P. K. Agrawal, Prasanta K. Dash
Software Mentions: 1
Published: over 7 years ago

10.1111/vop.12853

Presumed cancer‐associated retinopathy (CAR) mimicking Sudden Acquired Retinal Degeneration Syndrome (SARDS) in canines
Cited by: 2
Author(s): Siniša D. Grozdanić, Tatjana Lazic, Helga Kecova, Kabhilan Mohan, Grażyna Adamus, Markus H. Kuehn
Software Mentions: 1
Published: almost 4 years ago

10.1074/mcp.RA120.001955

Chemical Genetics of AGC-kinases Reveals Shared Targets of Ypk1, Protein Kinase A and Sch9
Cited by: 16
Author(s): Michaël Plank, M. P. Perepelkina, Markus Müller, Stefania Vaga, Xiaoming Zou, Clélia Bourgoint, Marina Berti, Jacques Saarbach, Steven Haesendonckx, Nicolas Winssinger, Ruedi Aebersold, Robbie Loewith
Software Mentions: 1
Published: over 4 years ago