Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: cutadapt
https://packages.ecosyste.ms/registries/pypi.org/packages/cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
63 versions
Latest release: 8 months ago
14 dependent packages
40,808 downloads last month
Papers Mentioning cutadapt 1,562
10.1093/gbe/evy192
Pan-Parastagonospora Comparative Genome Analysis—Effector Prediction and Genome EvolutionCited by: 29
Author(s): Robert A. Syme, Kar‐Chun Tan, Kasia Rybak, Timothy L. Friesen, Bruce A. McDonald, Richard P. Oliver, James K. Hane
Software Mentions: 1
Published: over 5 years ago
10.1093/gbe/evy220
Rapid Expansion of a Highly Germline-Expressed<i>Mariner</i>Element Acquired by Horizontal Transfer in the Fire Ant GenomeCited by: 6
Author(s): Chih-Chi Lee, John Wang
Software Mentions: 1
Published: over 5 years ago
10.18632/oncotarget.24138
Analysis of a gene panel for targeted sequencing of colorectal cancer samplesCited by: 8
Author(s): Klaus H. Jensen, José M. G. Izarzugaza, Agnieszka Sierakowska Juncker, Rasmus Borup Hansen, Torben Frøstrup Hansen, Pascal Timshel, Thórarinn Blöndal, Thomas Skøt Jensen, Eske Rygaard-Hjalsted, Peter Marynen, Michael Thorsen, Rasmus Wernersson, Henrik Bjørn Nielsen, Anders Jakobsen, Søren Brunak, Flemming Brandt Sørensen
Software Mentions: 1
Published: over 6 years ago
10.1093/gbe/evz164
Multilocus Analysis Resolves the European Finch Epidemic Strain of Trichomonas gallinae and Suggests Introgression from Divergent TrichomonadsCited by: 13
Author(s): Abdulwahed Fahad Alrefaei, Ross Low, Neil Hall, Rodrigo Jardim, Alberto M. R. Dávila, Richard W. Gerhold, Shinto K. John, Sascha Steinbiss, Andrew A. Cunningham, Becki Lawson, Diana Bell, Kevin M. Tyler
Software Mentions: 1
Published: almost 5 years ago
10.3389/fphys.2017.00935
Alternative Splicing of NOX4 in the Failing Human HeartCited by: 28
Author(s): Zoltán V. Varga, Márton Pipicz, Júlia Aliz Baán, Tamás Baranyai, Gábor Koncsos, Przemysław Leszek, Mariusz Kuśmierczyk, Fátima Sánchez-Cabo, Pablo García‐Pavía, Gábor J. Brenner, Zoltán Giricz, Tamás Csont, Luca Mendler, Enrique Lara‐Pezzi, Pál Pacher, Péter Ferdinándy
Software Mentions: 1
Published: over 6 years ago
10.1155/2016/5381871
Genomic Analysis of a Serotype 5<i>Streptococcus pneumoniae</i>Outbreak in British Columbia, Canada, 2005–2009Cited by: 6
Author(s): Ruth R. Miller, Morgan G. I. Langille, Vincent Montoya, Anamaria Crisan, Aleksandra Stefanovic, Irene Martín, Linda Hoang, David M. Patrick, Marc G. Romney, Gregory J. Tyrrell, Steven J.M. Jones, Fiona S. L. Brinkman, Patrick Tang
Software Mentions: 1
Published: over 8 years ago
10.3389/fnmol.2017.00435
Delayed Degradation and Impaired Dendritic Delivery of Intron-Lacking EGFP-Arc/Arg3.1 mRNA in EGFP-Arc Transgenic MiceCited by: 12
Author(s): Oswald Steward, Kelly Matsudaira Yee, Shannon Farris, Patricia Salgado Pirbhoy, Paul F. Worley, Koji Okamura, Hiroyuki Okuno, Haruhiko Bito
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2021.669910
Comparing Quantitative Methods for Analyzing Sediment DNA Records of Cyanobacteria in Experimental and Reference LakesCited by: 7
Author(s): Hebah Mejbel, William Dodsworth, Alexandre Baud, Irene Gregory‐Eaves, Frances R. Pick
Software Mentions: 1
Published: almost 3 years ago
10.1007/s10549-020-05836-7
Identification of candidate mediators of chemoresponse in breast cancer through therapy-driven selection of somatic variantsCited by: 11
Author(s): Waleed S. Al Amri, Diana E. Baxter, Andrew M. Hanby, Lucy F. Stead, Eldo T. Verghese, James L. Thorne, Tom Hughes
Software Mentions: 1
Published: almost 4 years ago
10.3389/fmicb.2017.02084
Genome Replication in Thermococcus kodakarensis Independent of Cdc6 and an Origin of ReplicationCited by: 21
Author(s): Alexandra M. Gehring, David P. Astling, Rie Matsumi, Brett W. Burkhart, Zvi Kelman, John N. Reeve, Kenneth L. Jones, Thomas J. Santangelo
Software Mentions: 1
Published: over 6 years ago
10.1186/s13058-017-0929-z
Evaluating the breast cancer predisposition role of rare variants in genes associated with low-penetrance breast cancer risk SNPsCited by: 21
Author(s): Na Li, Simone M. Rowley, Ella R. Thompson, Simone McInerny, Lisa Devereux, Kaushalya Amarasinghe, Magnus Zethoven, Richard Lupat, David Goode, Jason Li, Alison H. Trainer, Kylie L. Gorringe, Paul James, Ian Campbell
Software Mentions: 1
Published: over 6 years ago
10.1186/s40529-017-0191-9
A termite symbiotic mushroom maximizing sexual activity at growing tips of vegetative hyphaeCited by: 5
Author(s): Huei Mei Hsieh, Mei Chu Chung, Pao Yang Chen, Fei Man Hsu, Wen‐Wei Liao, Ai Ning Sung, Chun-Ru Lin, Rachel Wang, Yu Hsin Kao, Mei Jane Fang, Chi Yung Lai, Chieh-Chen Huang, Jyh Ching Chou, Wen Neng Chou, Bill C.H. Chang, Yu Ming Ju
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2019.02848
The Response of Microbiota Community to Streptococcus agalactiae Infection in Zebrafish IntestineCited by: 23
Author(s): Qilin Zhang, Hongwei Li, Wei Wu, Man Zhang, Jun Guo, Xian-Yu Deng, Rui Wang, Lin Lü
Software Mentions: 1
Published: over 4 years ago
10.3389/fmicb.2021.635506
Printing Microbial Dark Matter: Using Single Cell Dispensing and Genomics to Investigate the Patescibacteria/Candidate Phyla RadiationCited by: 12
Author(s): Sandra Wiegand, Hang T. Dam, Julian Riba, John Vollmers, Anne‐Kristin Kaster
Software Mentions: 1
Published: almost 3 years ago
10.3389/fmicb.2021.637811
Global Trends of Benthic Bacterial Diversity and Community Composition Along Organic Enrichment Gradients of Salmon FarmsCited by: 10
Author(s): Larissa Frühe, Verena Dully, Dominik Forster, Nigel Keeley, Olivier Laroche, Xavier Pochon, S. Robinson, Thomas A. Wilding, Thorsten Stoeck
Software Mentions: 1
Published: about 3 years ago
10.3389/fmicb.2021.692975
Bifidobacteria Strain Typing by Fourier Transform Infrared SpectroscopyCited by: 8
Author(s): Francesca Deidda, Nicole Bozzi Cionci, Miriam Cordovana, Ilenia Campedelli, Fabio Fracchetti, Diana Di Gioia, Simone Ambretti, Marco Pane
Software Mentions: 1
Published: over 2 years ago
10.1038/ejhg.2015.281
Genomic complexity of urothelial bladder cancer revealed in urinary cfDNACited by: 106
Author(s): Fiona S. Togneri, Douglas G. Ward, Joseph Foster, Adam J. Devall, Paula Wojtowicz, Sofia Alyas, Fabiana Ramos Vasques, Assa Oumie, Nicholas D. James, Kar Keung Cheng, Maurice P. Zeegers, Nayneeta Deshmukh, B. O’Sullivan, Philippe Tanière, Karen G. Spink, Dominic McMullan, Mike Griffiths, Richard T. Bryan
Software Mentions: 1
Published: over 8 years ago
10.1186/s13072-018-0209-x
HAM-TBS: high-accuracy methylation measurements via targeted bisulfite sequencingCited by: 16
Author(s): Simone Roeh, Tobias Wiechmann, Susann Sauer, Maik Ködel, Elisabeth B. Binder, Nadine Provençal
Software Mentions: 1
Published: almost 6 years ago
10.1093/gigascience/gix053
An expanded mammal mitogenome dataset from Southeast AsiaCited by: 23
Author(s): Faezah Mohd Salleh, Jazmín Ramos‐Madrigal, Fernando Peñaloza, Shanlin Liu, S Sinding Mikkel-Holger, P Patel Riddhi, Raquel A. Martins, Dorina Lenz, Jörns Fickel, Christian Roos, Mohd Shahir Shamsir, Mohammad Shahfiz Azman, Burton K. Lim, J. Stephen, Andreas Wilting, M. Thomas P. Gilbert
Software Mentions: 1
Published: almost 7 years ago
10.1080/15592294.2019.1656159
Battle of epigenetic proportions: comparing Illumina’s EPIC methylation microarrays and TruSeq targeted bisulfite sequencingCited by: 22
Author(s): Jonathan Heiss, Kasey Brennan, Andrea A. Baccarelli, Martha M. Téllez-Rojo, Guadalupe Estrada-Gutiérrez, Robert O. Wright, Allan C. Just
Software Mentions: 1
Published: over 4 years ago
10.1002/ece3.7805
Southern introgression increases adaptive immune gene variability in northern range margin populations of Fire‐bellied toadCited by: 2
Author(s): Binia De Cahsan, Katrin Kiemel, Michael V. Westbury, Maike Lauritsen, Marijke Autenrieth, Günter Gollmann, Silke Schweiger, Marika Stenberg, Per Nyström, Hauke Drews, Ralph Tiedemann
Software Mentions: 1
Published: almost 3 years ago
10.1002/ece3.5748
Has gene expression neofunctionalization in the fire ant antennae contributed to queen discrimination behavior?Cited by: 7
Author(s): Viet Dai Dang, Amir B. Cohanim, Silvia Fontana, Eyal Privman, John Wang
Software Mentions: 1
Published: over 4 years ago
10.1002/ece3.4246
A subset of chemosensory genes differs between two populations of a specialized leaf beetle after host plant shiftCited by: 8
Author(s): Ding Wang, Stefan Pentzold, Maritta Kunert, Marco Groth, Wolfgang Brandt, Jacques Pasteels, Wilhelm Boland, Antje Burse
Software Mentions: 1
Published: almost 6 years ago
10.1093/gigascience/giaa087
Hi-C chromosome conformation capture sequencing of avian genomes using the BGISEQ-500 platformCited by: 5
Author(s): Marcela Sandoval-Velasco, Juan Antonio Rodríguez, Cynthia Pérez Estrada, Guojie Zhang, E Aiden, Marc A. Martı́-Renom, M. Thomas P. Gilbert, Oliver Smith
Software Mentions: 1
Published: almost 4 years ago
10.1242/dmm.035337
A <i>Drosophila</i> model of combined D-2- and L-2-hydroxyglutaric aciduria reveals a mechanism linking mitochondrial citrate export with oncometabolite accumulationCited by: 21
Author(s): Hongde Li, Alexander J Hurlburt, Jason M. Tennessen
Software Mentions: 1
Published: over 6 years ago
10.1080/19490976.2020.1801964
A compromised developmental trajectory of the infant gut microbiome and metabolome in atopic eczemaCited by: 47
Author(s): Le Duc Huy Ta, James Chun Yip Chan, Gaik Chin Yap, Rikky W. Purbojati, Daniela I. Drautz–Moses, Yanqing Koh, Carina Jing Xuan Tay, Chiung Hui Huang, Dorinda Yan Qin Kioh, Jia Yun Woon, Elizabeth Huiwen Tham, Evelyn Xiu Ling Loo, Lynette Pei‐Chi Shek, Neerja Karnani, Angela Goh, Hugo P.S. Van Bever, Oon Hoe Teoh, Yiong Huak Chan, Christophe Lay, Jan Knol, Fabian Yap, Kok Hian Tan, Yap Seng Chong, Keith M. Godfrey, Staffan Kjelleberg, Stephan C. Schuster, Eric Chun Yong Chan, Bee Wah Lee
Software Mentions: 1
Published: over 3 years ago
10.1242/dmm.047431
Transient, flexible gene editing in zebrafish neutrophils and macrophages for determination of cell-autonomous functionsCited by: 9
Author(s): Abdulsalam I. Isiaku, Zuobing Zhang, Vahid Pazhakh, Harriet Rose Manley, Ella R. Thompson, Lucy Fox, Satwica Yerneni, Piers Blombery, Graham J. Lieschke
Software Mentions: 1
Published: almost 3 years ago
10.1007/s00125-020-05187-4
Knockout of vascular smooth muscle EGF receptor in a mouse model prevents obesity-induced vascular dysfunction and renal damage in vivoCited by: 9
Author(s): Christian Stern, Barbara Schreier, Alexander Nolze, Sindy Rabe, Sigrid Mildenberger, Michael Gekle
Software Mentions: 1
Published: almost 4 years ago
10.1038/hortres.2017.20
Additive QTLs on three chromosomes control flowering time in woodland strawberry (Fragaria vesca L.)Cited by: 20
Author(s): Samia Samad, Takeshi Kurokura, Essi V. Koskela, Tuomas Toivainen, Vipul Patel, Katriina Mouhu, Daniel J. Sargent, Timo Hytönen
Software Mentions: 1
Published: almost 7 years ago
10.1186/s13068-018-1278-6
Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweedCited by: 24
Author(s): Özgül Calicioglu, Michael J. Shreve, Tom L. Richard, Rachel A. Brennan
Software Mentions: 1
Published: over 5 years ago
10.1042/BSR20170768
MicroRNA sequence analysis identifies microRNAs associated with peri-implantitis in dogsCited by: 20
Author(s): Xiaolin Wu, Xipeng Chen, Wenxiang Mi, Tingting Wu, Qinhua Gu, Hui Huang
Software Mentions: 1
Published: over 6 years ago
10.1242/dev.199589
Gene expression variation in arabidopsis embryos at single-nucleus resolutionCited by: 16
Author(s): Ping Kao, Michael A. Schon, Magdalena Mosiołek, Balaji Enugutti, Michael D. Nodine
Software Mentions: 1
Published: almost 3 years ago
10.1016/j.dib.2017.11.001
Data on RNA-seq analysis of Garcinia mangostana L. seed developmentCited by: 4
Author(s): Mazlan Othman, Azhani Abdul-Rahman, Hoe-Han Goh, Wan Mohd Aizat, Normah Mohd Noor
Software Mentions: 1
Published: over 6 years ago
10.1200/PO.19.00014
Evaluation of Commercial Circulating Tumor DNA Test in Metastatic Prostate CancerCited by: 22
Author(s): Sinja Taavitsainen, Matti Annala, Elisa M. Ledet, Kevin Beja, Patrick J. O. Miller, Marcus W. Moses, Matti Nykter, Kim N., Oliver Sartor, Alexander W. Wyatt
Software Mentions: 1
Published: over 4 years ago
10.1016/j.dib.2018.09.118
Comparing microbial community compositions of biogas and sewage treatment plants by analyzing 16S rRNA gene dataCited by: 1
Author(s): Christian Buettner, Matthias Noll
Software Mentions: 1
Published: over 5 years ago
10.7554/eLife.68110
Functional development of a V3/glycan-specific broadly neutralizing antibody isolated from a case of HIV superinfectionCited by: 4
Author(s): Mackenzie M. Shipley, Vidya Mangala Prasad, Laura Doepker, Adam S. Dingens, D. Ralph, Elias Harkins, Amrit Dhar, Dana Arenz, Vrasha Chohan, Haidyn Weight, Kishor Mandaliya, Jesse D Bloom, F. A. Matsen, Kelly K. Lee
Software Mentions: 1
Published: almost 3 years ago
10.1016/j.dib.2019.104680
De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal watersCited by: 11
Author(s): Kit Yinn Teh, Wan Afifudeen Che Lah, Azimon Abdul Aziz, Li Lian Wong, Saw Hong Loh, Thye San
Software Mentions: 1
Published: over 4 years ago
10.3390/biomedicines6020041
Transcriptome Analysis of Acute Phase Liver Graft Injury in Liver TransplantationCited by: 5
Author(s): Nikki P. Lee, Haiyang Wu, Kevin Tak‐Pan Ng, Ruibang Luo, Tak Wah Lam, Chung‐Mau Lo, Kwan Man
Software Mentions: 1
Published: about 6 years ago
10.1186/s40659-017-0111-1
Alpinia oxyphylla Miq. extract changes miRNA expression profiles in db-/db- mouse kidneyCited by: 14
Author(s): Guankui Du, Mochao Xiao, Xuezi Zhang, Ming Wen, Chao Pang, Shangfei Jiang, Sang Sheng-gang, Yiqiang Xie
Software Mentions: 1
Published: about 7 years ago
10.1016/j.dib.2019.104948
Cultivated Escherichia coli diversity in intestinal microbiota of Crohn's disease patients and healthy individuals: Whole genome dataCited by: 9
Author(s): Maria Siniagina, Maria Markelova, Alexander Laikov, Eugenia A. Boulygina, Dilyara Khusnutdinova, A. M. Kharchenko, Albina Misbakhova, Tatiana V. Grigoryeva
Software Mentions: 1
Published: over 4 years ago
10.1111/jcmm.13940
Analysis of changes to lncRNAs and their target mRNAs in murine jejunum after radiation treatmentCited by: 8
Author(s): Qianying Lu, Wei Gong, Jinhan Wang, Kaihua Ji, Xinwei Sun, Chang Xu, Liqing Du, Yan Wang, Qiang Liu
Software Mentions: 1
Published: over 5 years ago
10.1186/s13062-019-0255-8
Differentially expressed tRFs in CD5 positive relapsed & refractory diffuse large B cell lymphoma and the bioinformatic analysis for their potential clinical useCited by: 12
Author(s): Qingyuan Qu, Ying Li, Xiaosheng Fang, Lingyan Zhang, Chao Xue, Xueling Ge, Xin Wang, Yujie Jiang
Software Mentions: 1
Published: over 4 years ago
10.1111/jcmm.14145
miR‐4732‐5p promotes breast cancer progression by targeting <scp>TSPAN</scp>13Cited by: 17
Author(s): Yawen Wang, Song Zhao, Xunyi Yuan, Yao Liu, Kai Zhang, Jianli Wang, Jiang Zhu, Rong Ma
Software Mentions: 1
Published: over 5 years ago
10.1186/s12859-017-1719-4
Ub-ISAP: a streamlined UNIX pipeline for mining unique viral vector integration sites from next generation sequencing dataCited by: 5
Author(s): Atul Kamboj, Claus V. Hallwirth, Ian E. Alexander, Geoffrey McCowage, Belinda Kramer
Software Mentions: 1
Published: almost 7 years ago
10.1016/j.dib.2021.107432
COVID-19 patients and Dementia: Frontal cortex transcriptomic dataCited by: 2
Author(s): Maria Garofalo, Stella Gagliardi, Susanna Zucca, Cecilia Pandini, Francesca Dragoni, Daisy Sproviero, Orietta Pansarasa, Tino Emanuele Poloni, Valentina Medici, Annalisa Davin, Silvia Damiana Visonà, Matteo Moretti, Antonio Guaita, Mauro Ceroni, L Tronconi, Cristina Cereda
Software Mentions: 1
Published: over 2 years ago
10.1016/j.dib.2017.11.024
Transcriptome data of Epinephelus fuscoguttatus infected by Vibrio vulnificusCited by: 6
Author(s): Fahmeeda Mohamad Jazamuddin, Wan Mohd Aizat, Hoe-Han Goh, Chen Fei Low, Syarul Nataqain Baharum
Software Mentions: 1
Published: over 6 years ago
10.1016/j.csbj.2021.03.034
Formation, characterization and modeling of emergent synthetic microbial communitiesCited by: 8
Author(s): Jia Wang, Dana L. Carper, Leah H. Burdick, Him K. Shrestha, Manasa R. Appidi, Paul E. Abraham, Collin M. Timm, Robert L. Hettich, Dale A. Pelletier, Mitchel J. Doktycz
Software Mentions: 1
Published: over 3 years ago
10.1128/AEM.01768-20
Antibacterial and Antivirulence Activity of Manuka Honey against Genetically Diverse Staphylococcus pseudintermedius StrainsCited by: 7
Author(s): Helen Brown, Georgie Metters, Matthew D. Hitchings, Thomas S. Wilkinson, Luís G O de Sousa, Jenna Cooper, Harry Dance, Robert J. Atterbury, Rowena Jenkins
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-020-01425-y
Turnip mosaic virus in oilseed rape activates networks of sRNA-mediated interactions between viral and host genomesCited by: 12
Author(s): Nicolas Pitzalis, Khalid Amari, Stéfanie Graindorge, David Pflieger, Livia Donaire, Michael Wassenegger, César Llave, Manfred Heinlein
Software Mentions: 1
Published: over 3 years ago
10.1186/1745-6150-9-3
The human platelet: strong transcriptome correlations among individuals associate weakly with the platelet proteomeCited by: 76
Author(s): Eric Londin, Eleftheria Hatzimichael, Phillipe Loher, Leonard C. Edelstein, Chad A. Shaw, Kathleen Delgrosso, Paolo Fortina, Paul F. Bray, Steven E. McKenzie, Isidore Rigoutsos
Software Mentions: 1
Published: over 10 years ago
10.1093/bioinformatics/btab016
IsoMiRmap: fast, deterministic and exhaustive mining of isomiRs from short RNA-seq datasetsCited by: 10
Author(s): Phillipe Loher, Nestoras Karathanasis, Eric Londin, Paul F. Bray, Venetia Pliatsika, Aristeidis G. Telonis, Isidore Rigoutsos
Software Mentions: 1
Published: over 3 years ago
10.1080/21655979.2021.1890382
Targeted next-generation sequencing for cancer-associated gene mutation and copy number detection in 206 patients with non–small-cell lung cancerCited by: 14
Author(s): Songbai Zheng, Xiaodan Wang, Ying Fu, Beibei Li, Jianhua Xu, Haifang Wang, Zhen Huang, Hui Xu, Yurong Qiu, Yao-Zhou Shi, Kui Li
Software Mentions: 1
Published: over 3 years ago
10.1186/s13104-017-3061-3
Reduction of the contaminant fraction of DNA obtained from an ancient giant panda boneCited by: 26
Author(s): Nikolas Basler, Georgios Xenikoudakis, Michael V. Westbury, Liguo Song, Guilian Sheng, Axel Barlow
Software Mentions: 1
Published: over 6 years ago
10.1186/s12870-019-2045-y
Construction of genetic linkage map and identification of a novel major locus for resistance to pine wood nematode in Japanese black pine (Pinus thunbergii)Cited by: 15
Author(s): Tomonori Hirao, Koji Matsunaga, Hideki Hirakawa, Kenta Shirasawa, Keiya Isoda, Kentaro Mishima, Miho Tamura, Atsushi Watanabe
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.ppat.1003013
Revised Phylogeny and Novel Horizontally Acquired Virulence Determinants of the Model Soft Rot Phytopathogen Pectobacterium wasabiae SCC3193Cited by: 98
Author(s): Johanna Nykyri, Outi Niemi, Patrik Koskinen, Jussi Nokso-Koivisto, Miia Pasanen, Martin Broberg, Ilja Plyusnin, Petri Törönen, Liisa Holm, Minna Pirhonen, E. Tapio Palva
Software Mentions: 1
Published: over 11 years ago
10.1186/s12870-015-0516-3
Computational prediction of miRNAs and their targets in Phaseolus vulgaris using simple sequence repeat signaturesCited by: 26
Author(s): Chandran Nithin, Nisha Patwa, Amal Thomas, Ranjit Prasad Bahadur, Jolly Basak
Software Mentions: 1
Published: almost 9 years ago
10.1038/cti.2016.42
Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencingCited by: 39
Author(s): В. И. Вигдорович, Brian G. Oliver, Sara Carbonetti, Nicholas Dambrauskas, Miles D. Lange, Christina Yacoob, W. Leahy, Jonathan Callahan, Leonidas Stamatatos, D. Noah Sather
Software Mentions: 1
Published: almost 8 years ago
10.1186/s13148-019-0640-2
Temple syndrome in a patient with variably methylated CpGs at the primary MEG3/DLK1:IG-DMR and severely hypomethylated CpGs at the secondary MEG3:TSS-DMRCited by: 11
Author(s): Masayo Kagami, Atsuhiro Yanagisawa, Masaho Ota, Katsuyoshi Matsuoka, Akie Nakamura, Kazuo Matsubara, Kazuhiko Nakabayashi, Shuji Takada, Maki Fukami, Tsutomu Ogata
Software Mentions: 1
Published: about 5 years ago
10.1186/s13148-020-00938-x
Identification of fetal unmodified and 5-hydroxymethylated CG sites in maternal cell-free DNA for non-invasive prenatal testingCited by: 7
Author(s): Juozas Gordevičius, Milda Narmontė, Povilas Gibas, Kotryna Kvederavičiūtė, Vita Tomkutė, Priit Paluoja, Kaarel Krjutškov, Andres Salumets, Edita Kriukienė
Software Mentions: 1
Published: over 3 years ago
10.1186/s12870-019-1794-y
Identification of key genes and its chromosome regions linked to drought responses in leaves across different crops through meta-analysis of RNA-Seq dataCited by: 42
Author(s): Jubina Benny, Antonino Pisciotta, Tiziano Caruso, Federico Martinelli
Software Mentions: 1
Published: about 5 years ago
10.3390/ani10071130
Meta-Transcriptomic Analysis of RNAseq Data Reveals Pacu and Loach Fish with Unusually High Levels of Myoglobin Expression in Skeletal MusclesCited by: 1
Author(s): Rui-Yi Chen, Bui Thi Ngoc Hieu, Gilbert Audira, Bao Liu, Ming‐Der Lin, Chung-Der Hsiao
Software Mentions: 1
Published: almost 4 years ago