Projects: pypi: cutadapt

https://packages.ecosyste.ms/registries/pypi.org/packages/cutadapt

Adapter trimming and other preprocessing of high-throughput sequencing reads
63 versions
Latest release: almost 3 years ago
14 dependent packages
40,808 downloads last month

Enhanced Analysis
Repository Activity:
Repository Owner: Marcel Martin (user)
README Analysis: DOI Found CITATION.cff
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +4 Science terms in README
    2 scientific terms found in README
  • +40 DOI references
    4 DOI references found in README
  • +15 CITATION.cff file
    Contains citation file for academic attribution
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -25 Non-science indicators
    1 non-scientific terms found

Very Likely Science (100)

Papers Mentioning cutadapt 1,562

10.3389/fimmu.2021.631450
LncRNATUG1 Facilitates Th2 Cell Differentiation by Targeting the miR-29c/B7-H3 Axis on Macrophages
Cited by: 9
Author(s): Hongwei Sun, Ting Wang, Weili Zhang, Husheng Dong, Wenjing Gu, Li Huang, Yan Ya, Canhong Zhu, Zhengrong Chen
Software Mentions: 1
Published: about 5 years ago
10.3389/fimmu.2021.673248
Targeted Next-Generation Sequencing Combined With Circulating-Free DNA Deciphers Spatial Heterogeneity of Resected Multifocal Hepatocellular Carcinoma
Cited by: 4
Author(s): Jianzhen Lin, Shuaiguo Zhao, Dongxu Wang, Song Yang, Yue Che, Yang Xu, Jianshan Mao, Fucun Xie, Junyu Long, Yi Bai, Xiaobo Yang, Lei Zhang, Jin Bian, Xin Lu, Xinting Sang, Jie Pan, Kai Wang, Haitao Zhao
Software Mentions: 1
Published: over 5 years ago
10.3389/fimmu.2017.00547
Killer Immunoglobulin-Like Receptor Allele Determination Using Next-Generation Sequencing Technology
Cited by: 22
Author(s): Bercelin Maniangou, Nolwenn Legrand, Mehdi Alizadeh, Ulysse Guyet, Catherine Willem, Grégoire David, Éric Charpentier, Alexandre Walencik, Christelle Retière, Katia Gagne
Software Mentions: 1
Published: over 9 years ago
10.3389/fmicb.2020.01637
Comparative Genome-Centric Analysis of Freshwater and Marine ANAMMOX Cultures Suggests Functional Redundancy in Nitrogen Removal Processes
Cited by: 32
Author(s): Muhammad Ali, Dario Rangel Shaw, Mads Albertsen, Pascal E. Saikaly
Software Mentions: 1
Published: about 6 years ago
10.3389/fmicb.2017.00936
Analysis of the Genome and Mobilome of a Dissimilatory Arsenate Reducing Aeromonas sp. O23A Reveals Multiple Mechanisms for Heavy Metal Resistance and Metabolism
Cited by: 18
Author(s): Witold Uhrynowski, Przemysław Decewicz, Łukasz Dziewit, Monika Radlińska, Paweł S. Krawczyk, Leszek Lipiński, Dorota Adamska, Łukasz Drewniak
Software Mentions: 1
Published: over 9 years ago
10.3389/fmicb.2020.591619
Rice Stripe Virus Coat Protein-Mediated Virus Resistance Is Associated With RNA Silencing in Arabidopsis
Cited by: 3
Author(s): Feng Sun, Peisong Hu, Wei Wang, Ying Lan, Linlin Du, Yijun Zhou, Tong Zhou
Software Mentions: 1
Published: almost 6 years ago
10.3389/fmicb.2018.01005
A Dispensable Chromosome Is Required for Virulence in the Hemibiotrophic Plant Pathogen Colletotrichum higginsianum
Cited by: 37
Author(s): Peter-Louis Plaumann, Johannes Schmidpeter, Marlis Dahl, Leila Taher, Christian A. Koch
Software Mentions: 1
Published: over 8 years ago
10.3389/fmicb.2019.00005
Whole-Genome Comparisons Among the Genus Shewanella Reveal the Enrichment of Genes Encoding Ankyrin-Repeats Containing Proteins in Sponge-Associated Bacteria
Cited by: 10
Author(s): Anoop Alex, Agostinho Antunes
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2021.696913
Dynamic Changes in Lung Microbiota of Broilers in Response to Aging and Ammonia Stress
Cited by: 1
Author(s): Jian Chen, Ai Jin, Lei Huang, Yan Zhao, Yuwen Li, Haotian Zhang, Xiaojun Yang, Qingzhu Sun
Software Mentions: 1
Published: about 5 years ago
10.1080/0886022X.2021.1979040
Identification of circular RNA expression profiles in renal fibrosis induced by obstructive injury
Cited by: 5
Author(s): Jiangju Huang, Zhihao Zhang, Benquan Liu, Ying Gao, Jiayi Nie, Sijian Wen, Xiaomin Lai, Hua Liu
Software Mentions: 1
Published: over 5 years ago
10.1007/s43032-020-00175-w
Expression of Stromal Progesterone Receptor and Differential Methylation Patterns in the Endometrium May Correlate with Response to Progesterone Therapy in Endometrial Complex Atypical Hyperplasia
Cited by: 5
Author(s): Adam Neal, M.I. Núñez, Tiffany Lai, Anela Tosevska, Marco Morselli, M. Amneus, Mae Zakhour, Neda A. Moatamed, Matteo Pellegrini, Sanaz Memarzadeh
Software Mentions: 1
Published: over 6 years ago
10.1186/s12977-018-0426-1
Quantitation of the latent HIV-1 reservoir from the sequence diversity in viral outgrowth assays
Cited by: 6
Author(s): Art F. Y. Poon, Jessica L. Prodger, Briana Lynch, Jun Lai, Steven J. Reynolds, Jingo Kasule, Adam A. Capoferri, Susanna L. Lamers, Christopher W. Rodriguez, Daniel Bruno, Stephen F. Porcella, Craig Martens, Thomas C. Quinn, Andrew D. Redd
Software Mentions: 1
Published: about 8 years ago
10.1038/srep09086
Rapid genome resequencing of an atoxigenic strain of Aspergillus carbonarius
Cited by: 14
Author(s): F. Javier Cabañes, Walter Sanseverino, G. Castellá, M.R. Bragulat, Riccardo Aiese Cigliano, Armand Sánchez
Software Mentions: 1
Published: over 11 years ago
10.1038/srep25719
Integrative microbial community analysis reveals full-scale enhanced biological phosphorus removal under tropical conditions
Cited by: 56
Author(s): Yingyu Law, Rasmus Hansen Kirkegaard, Angel Anisa Cokro, Xianghui Liu, Krithika Arumugam, Chao Xie, Mikkel Stokholm-Bjerregaard, Daniela I. Drautz–Moses, Per Halkjær Nielsen, Stefan Wuertz, Rohan B. H. Williams
Software Mentions: 1
Published: over 10 years ago
10.1038/srep31326
The genetics of an early Neolithic pastoralist from the Zagros, Iran
Cited by: 57
Author(s): Marcos Gallego Llorente, Sarah Connell, Eppie R. Jones, DC Merrett, Yeonsu Jeon, Anders Eriksson, Veronika Siska, Cristina Gamba, Christopher Meiklejohn, Robert Beyer, Sungwon Jeon, Yun Sang Cho, Michael Hofreiter, Jihun Bhak, Andrea Manica, Ron Pinhasi
Software Mentions: 1
Published: about 10 years ago
10.1038/srep43552
Genetic architecture of threshold reaction norms for male alternative reproductive tactics in Atlantic salmon (Salmo salar L.)
Cited by: 25
Author(s): Olivier Lepais, Aurélie Manicki, Stéphane Glise, Mathieu Buoro, Agnès Bardonnet
Software Mentions: 1
Published: over 9 years ago
10.1038/srep46037
Intestinal microbiota link lymphopenia to murine autoimmunity via PD-1+CXCR5−/dim B-helper T cell induction
Cited by: 16
Author(s): Toshiki Eri, K. Kawahata, Takeyuki Kanzaki, Mitsuru Imamura, Koji Michishita, Lisa Akahira, Ei Bannai, Noritada Yoshikawa, Yoshinobu Kimura, Takeshi Satoh, Satoshi Uematsu, Hirotoshi Tanaka, Kazuhiko Yamamoto
Software Mentions: 1
Published: over 9 years ago
10.1038/s41598-017-02880-0
Gut Dysbiosis and Neurobehavioral Alterations in Rats Exposed to Silver Nanoparticles
Cited by: 87
Author(s): Angela B. Javurek, Dhananjay Suresh, William G. Spollen, Marcia L. Hart, Sarah A. Hansen, Mark R. Ellersieck, Nathan J. Bivens, Scott A. Givan, Anandhi Upendran, Raghuraman Kannan, Cheryl S. Rosenfeld
Software Mentions: 1
Published: over 9 years ago
10.1038/s41598-017-06256-2
Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli
Cited by: 90
Author(s): Nicole Stoesser, Anna E. Sheppard, Gisele Peirano, LW Anson, Louise Pankhurst, Robert Sebra, Hang Phan, Andrew Kasarskis, Amy J Mathers, Timothy E. A. Peto, Patricia A. Bradford, Mary Motyl, A. Sarah Walker, Derrick W. Crook, Johann Pitout
Software Mentions: 1
Published: about 9 years ago
10.1038/s41598-017-09334-7
De novo transcriptome assembly for the spiny mouse (Acomys cahirinus)
Cited by: 33
Author(s): Jared Mamrot, Roxane Legaie, Stacey J. Ellery, Trevor Wilson, Torsten Seemann, David Powell, David K. Gardner, David W. Walker, Peter Temple-Smith, Anthony T. Papenfuss, Hayley Dickinson
Software Mentions: 1
Published: about 9 years ago
10.1038/s41598-017-12715-7
EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica
Cited by: 22
Author(s): Dorota A. Rzechonek, Cécile Neuvéglise, Hugo Devillers, Waldemar Rymowicz, Aleksandra M. Mirończuk
Software Mentions: 1
Published: almost 9 years ago
10.1038/s41598-017-18091-6
Enrichment of megabase-sized DNA molecules for single-molecule optical mapping and next-generation sequencing
Cited by: 5
Author(s): Joanna Lopacinska-Jørgensen, Jonas Nyvold Pedersen, Mads Bak, Mana M. Mehrjouy, Kristian Tølbøl Sørensen, Peter Friis Østergaard, Brian Bilenberg, Anders Kristensen, Rafael J. Taboryski, Henrik Flyvbjerg, Rodolphe Marie, Niels Tommerup, Asli N. Silahtaroglu
Software Mentions: 1
Published: almost 9 years ago
10.1038/s41598-018-19198-0
Mutations in bassoon in individuals with familial and sporadic progressive supranuclear palsy-like syndrome
Cited by: 22
Author(s): Ichiro Yabe, Hiroaki Yaguchi, Yasutaka Kato, Yasuo Miki, Hidehisa Takahashi, Satoshi Tanikawa, Shinichi Shirai, Ikuko Takahashi, Mari Kimura, Yuka Hama, Masaaki Matsushima, Shinsuke Fujioka, Takahiro Kano, Masashi Watanabe, Shin Nakagawa, Y Kunieda, Yoshio Ikeda, Masato Hasegawa, Hiroshi Nishihara, Toshihisa Ohtsuka, Shinya Tanaka, Yoshio Tsuboi, Susumi Hatakeyama, Keiji Wakabayashi, Hidenao Sasaki
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-22473-9
A simple and robust real-time qPCR method for the detection of PIK3CA mutations
Cited by: 25
Author(s): Virginia Álvarez‐García, Clare Bartos, Ieva Keraite, Urmi Trivedi, Paul M. Brennan, Maïwenn Kersaudy-Kerhoas, Karim Gharbi, Olga Oikonomidou, Nicholas R. Leslie
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-22617-x
A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways
Cited by: 66
Author(s): Siavash Atashgahi, Bastian Hornung, Marcelle J. van der Waals, Ulisses Nunes da Rocha, Floor Hugenholtz, Bart Nijsse, Douwe Molenaar, Rob J.M. van Spanning, Alfons Johannes Maria Stams, Jan Gerritse, Hauke Smidt
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-23478-0
Cellular response to persistent foot-and-mouth disease virus infection is linked to specific types of alterations in the host cell transcriptome
Cited by: 20
Author(s): Lingling Han, Xiu Xin, Hailong Wang, Jiadai Li, Yanling Hao, Mingzhen Wang, Chengchao Zheng, Chao Shen
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-26524-z
Molecular Diagnosis of 34 Japanese Families with Leber Congenital Amaurosis Using Targeted Next Generation Sequencing
Cited by: 32
Author(s): Katsuhiro Hosono, Sachiko Nishina, Tadashi Yamaguchi, Satoshi Katagiri, Hirotomo Saitsu, Kentaro Kurata, Daisuke Miyamichi, Akiko Hikoya, Kei Mizobuchi, Tadashi Nakano, Shinsei Minoshima, Maki Fukami, Hiroyuki Kondo, M. Sato, Takaaki Hayashi, Noriyuki Azuma, Yoshihiro Hotta
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-019-41772-3
Extracellular small non-coding RNA contaminants in fetal bovine serum and serum-free media
Cited by: 23
Author(s): Bettina Mannerström, Riku O. Paananen, Ahmed G. Abu-Shahba, Jukka Moilanen, Riitta Seppänen‐Kaijansinkko, Sippy Kaur
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-019-44708-z
Uncovering of natural allelic variants of key yield contributing genes by targeted resequencing in rice (Oryza sativa L.)
Cited by: 4
Author(s): Lakshminarayana R. Vemireddy, Gopalakrishnamurty Kadambari, Gautam Reddy, Vijaya Sudhakara Rao Kola, Eswarayya Ramireddy, Venkata Ramana Rao Puram, Jyothi Badri, Suresh N. Eslavath, Swarajyalakshmi N. Bollineni, B. Jeevula Naik, Sreelakshmi Chintala, Rameshbabu Pottepalem, A. Srividhya, Ranjithkumar Nagireddy, V. B. Reddy Lachagari, Reddaiah Bodanapu, Sivarama Prasad Lekkala, Navajeet Chakravartty, E. A. Siddiq
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-019-44638-w
Genome-Wide DNA from Degraded Petrous Bones and the Assessment of Sex and Probable Geographic Origins of Forensic Cases
Cited by: 26
Author(s): Daniel Gaudio, Daniel Fernandes, Ryan Schmidt, Olivia Cheronet, Debora Mazzarelli, Mirko Mattia, Tadhg O’Keeffe, Robin N. M. Feeney, Cristina Cattaneo, Ron Pinhasi
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-019-45131-0
Assessment of low-coverage nanopore long read sequencing for SNP genotyping in doubled haploid canola (Brassica napus L.)
Cited by: 21
Author(s): M. Michelle Malmberg, Germán Spangenberg, Hans D. Daetwyler, Noel O. I. Cogan
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-019-45210-2
High-Resolution Copy Number Patterns From Clinically Relevant FFPE Material
Cited by: 5
Author(s): Anastasia Filia, Alastair Droop, Mark Harland, Helene Thygesen, Juliette Randerson-Moor, Helen Snowden, Claire Taylor, Joey Mark S. Diaz, Joanna Poźniak, Jérémie Nsengimana, Jonathan P. Laye, Julia Newton-Bishop, D. Timothy Bishop
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-019-47439-3
High prevalence of the MLH1 V384D germline mutation in patients with HER2-positive luminal B breast cancer
Cited by: 14
Author(s): Seung Eun Lee, Hye Seung Lee, Kyoung-Yeon Kim, Jung Hoon Park, Hanseong Roh, Ha Young Park, Wan-Seop Kim
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-019-49065-5
A new species in the major malaria vector complex sheds light on reticulated species evolution
Cited by: 54
Author(s): Maite G. Barrón, Christophe Paupy, Nil Rahola, Ousman Akone‐Ella, Marc F. Ngangue, Theodel A. Wilson-Bahun, Marco Pombi, Pierre Kengne, Carlo Costantini, Frédéric Simard, Josefa González, Diégo Ayala
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-019-53283-2
Time-coursed transcriptome analysis identifies key expressional regulation in growth cessation and dormancy induced by short days in Paulownia
Cited by: 9
Author(s): Jiayuan Wang, Hongyan Wang, Tao Deng, Zhen Liu, Xuewen Wang
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-019-56662-x
Type-2 Diabetics Reduces Spatial Variation of Microbiome Based on Extracellular Vesicles from Gut Microbes across Human Body
Cited by: 19
Author(s): Geumkyung Nah, Sang-Cheol Park, Kangjin Kim, Sung-Min Kim, Jaehyun Park, Sanghun Lee, Sungho Won
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-020-58324-9
Evaluation of the population structure and phylogeography of the Japanese Genji firefly, Luciola cruciata, at the nuclear DNA level using RAD-Seq analysis
Cited by: 12
Author(s): Dai‐ichiro Kato, Hirobumi Suzuki, Atsuhiro Tsuruta, Juri Maeda, Yoshinobu Hayashi, Kazunari Arima, Yuji Ito, Yukio Nagano
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-59529-8
Colorectal cancer diagnostic model utilizing metagenomic and metabolomic data of stool microbial extracellular vesicles
Cited by: 53
Author(s): Da Jung Kim, Jinho Yang, Ho-Chan Seo, Won Hee Lee, Dong Hoon Lee, Sungmin Kym, Young Soo Park, Jae Gyu Kim, In Jin Jang, Yoon Keun Kim, Joo Youn Cho
Software Mentions: 1
Published: over 6 years ago
10.3390/ijerph110202299
Environmental Arsenic Exposure and Microbiota in Induced Sputum
Cited by: 9
Author(s): Allison G. White, George S. Watts, Zhenqiang Lu, María Mercedes Meza-Montenegro, Eric Lutz, Philip Harber, Jefferey L. Burgess
Software Mentions: 1
Published: over 12 years ago
10.1007/s10295-019-02218-x
Rational development of transformation in <i>Clostridium thermocellum</i> ATCC 27405 via complete methylome analysis and evasion of native restriction–modification systems
Cited by: 20
Author(s): Lauren A. Riley, Lexiang Ji, Robert J. Schmitz, Janet Westpheling, Adam M. Guss
Software Mentions: 1
Published: about 7 years ago
10.7554/eLife.62337
A natural variant of the essential host gene MMS21 restricts the parasitic 2-micron plasmid in Saccharomyces cerevisiae
Cited by: 3
Author(s): Michelle Hays, Janet M. Young, Paula F Levan, Harmit S. Malik
Software Mentions: 1
Published: almost 6 years ago
10.7554/eLife.10565
Genomic DNA transposition induced by human PGBD5
Cited by: 62
Author(s): Anton Henssen, Elizabeth Hénaff, Eileen Jiang, Amy Eisenberg, Julianne Carson, Camila M. Villasante, Mondira Ray, Eric Still, Melissa Burns, Jorge Gandara, Cédric Feschotte, Christopher E. Mason, Alex Kentsis
Software Mentions: 1
Published: about 11 years ago
10.7554/eLife.43022
Random-sequence genetic oligomer pools display an innate potential for ligation and recombination
Cited by: 39
Author(s): Hannes Mutschler, Alexander I. Taylor, Benjamin T. Porebski, Alice Lightowlers, Gillian Houlihan, Mikhail Abramov, Piet Herdewijn, Philipp Holliger
Software Mentions: 1
Published: almost 8 years ago
10.7554/eLife.63444
Development of antibody-dependent cell cytotoxicity function in HIV-1 antibodies
Cited by: 3
Author(s): Laura Doepker, Sonja Danon, Elias Harkins, D. Ralph, Zak A. Yaffe, Meghan Garrett, Amrit Dhar, Cassia Wagner, Megan Stumpf, Dana Arenz, James A. Williams, Walter Jaoko, Kishor Mandaliya, Kelly K. Lee, F. A. Matsen, Julie Overbaugh
Software Mentions: 1
Published: over 5 years ago
10.7554/eLife.16072
CELF RNA binding proteins promote axon regeneration in C. elegans and mammals through alternative splicing of Syntaxins
Cited by: 28
Author(s): Lizhen Chen, Zhijie Liu, Bing Zhou, Chaoliang Wei, Yu Zhou, Michael G. Rosenfeld, Xiang Dong Fu, Andrew Chisholm, Yishi Jin
Software Mentions: 1
Published: over 10 years ago
10.7554/eLife.68110
Functional development of a V3/glycan-specific broadly neutralizing antibody isolated from a case of HIV superinfection
Cited by: 4
Author(s): Mackenzie M. Shipley, Vidya Mangala Prasad, Laura Doepker, Adam S. Dingens, D. Ralph, Elias Harkins, Amrit Dhar, Dana Arenz, Vrasha Chohan, Haidyn Weight, Kishor Mandaliya, Jesse D Bloom, F. A. Matsen, Kelly K. Lee
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.03696
The neural crest is a source of mesenchymal stem cells with specialized hematopoietic stem cell niche function
Cited by: 229
Author(s): Joan Isern, Andrés García‐García, Ana María Díaz Martín, Lorena Arranz, Daniel Martín-Pérez, Carlos Torroja, Fátima Sánchez-Cabo, Simón Méndez-Ferrer
Software Mentions: 1
Published: about 12 years ago
10.3390/ijms19020642
Refining the Results of a Classical SELEX Experiment by Expanding the Sequence Data Set of an Aptamer Pool Selected for Protein A
Cited by: 14
Author(s): Regina Stoltenburg, Beate Strehlitz
Software Mentions: 1
Published: over 8 years ago
10.3390/ijms20020290
RNA Sequencing Reveals Differential Gene Expression of Cerrena Unicolor in Response to Variable Lighting Conditions
Cited by: 8
Author(s): Anna Pawlik, Andrzej Mazur, Jerzy Wielbo, Piotr Koper, Kamil Żebracki, Agnieszka Kubik-Komar, Grzegorz Janusz
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20051018
Genomic Analysis of Shewanella sp. O23S—The Natural Host of the pSheB Plasmid Carrying Genes for Arsenic Resistance and Dissimilatory Reduction
Cited by: 17
Author(s): Witold Uhrynowski, Monika Radlińska, Łukasz Drewniak
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20122968
Integrated Analysis of the Altered lncRNAs and mRNAs Expression in 293T Cells after Ionizing Radiation Exposure
Cited by: 9
Author(s): Mengmeng Yang, Yuxiao Sun, Changyan Xiao, Kaihua Ji, Manman Zhang, Ningning He, Jinhan Wang, Qin Wang, Zhijuan Sun, Yan Wang, Liqing Du, Yang Liu, Chang Xu, Qiang Liu
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms21165753
Alterations of Rice (Oryza sativa L.) DNA Methylation Patterns Associated with Gene Expression in Response to Rice Black Streaked Dwarf Virus
Cited by: 6
Author(s): Linying Li, Yuqing He, Xueying Zhang, Hehong Zhang, Zongtao Sun, Junmin Li, Gaojie Hong
Software Mentions: 1
Published: about 6 years ago
10.3390/ijms22041792
Signatures of Dermal Fibroblasts from RDEB Pediatric Patients
Cited by: 4
Author(s): A. Beilin, Н. А. Евтушенко, Daniil K. Lukyanov, Н. Н. Мурашкин, Э. Т. Амбарчян, Alexander Pushkov, Kirill Savostyanov, А. П. Фисенко, O. S. Rogovaya, A. V. Vasiliev, E. A. Vorotelyak, Nadya G. Gurskaya
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms22084161
Integrated Analysis of the Transcriptome and Metabolome Revealed Candidate Genes Involved in GA3-Induced Dormancy Release in Leymus chinensis Seeds
Cited by: 10
Author(s): Bing Li, Pan Zhang, Fengdan Wang, Ran Li, Jian Liu, Qiannan Wang, Wei Liu, Bo Wang, Guofu Hu
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms22189876
RNA-Sequencing Based microRNA Expression Signature of Colorectal Cancer: The Impact of Oncogenic Targets Regulated by miR-490-3p
Cited by: 6
Author(s): Yuto Hozaka, Yoshiaki Kita, Ryutaro Yasudome, Takako Tanaka, Mitsuru Wada, Tetsuya Idichi, Kan Tanabe, Shunichi Asai, Shogo Moriya, Hiroko Toda, Shinichiro Mori, Hiroshi Kurahara, Takao Ohtsuka, Naohiko Seki
Software Mentions: 1
Published: about 5 years ago
10.18632/oncotarget.9272
Piwi-interacting RNAs and PIWI genes as novel prognostic markers for breast cancer
Cited by: 74
Author(s): Preethi Krishnan, Sunita Ghosh, Kathryn Graham, John R. Mackey, Olga Kovalchuk, Sambasivarao Damaraju
Software Mentions: 1
Published: over 10 years ago
10.18632/oncotarget.13563
VENTX induces expansion of primitive erythroid cells and contributes to the development of acute myeloid leukemia in mice
Cited by: 6
Author(s): Gudumac Eva, Naidu M. Vegi, Medhanie Mulaw, Tamoghna Mandal, Shiva Bamezai, Rainer Claus, Alpaslan Tasdogan, Leticia Quintanilla-Martı́nez, Alexander Grunenberg, Konstanze Döhner, Hartmut Döhner, Lars Bullinger, Torsten Haferlach, Christian Buske, Vijay P.S. Rawat, Michaela Feuring‐Buske
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.13816
MicroRNA-203 predicts human survival after resection of colorectal liver metastasis
Cited by: 16
Author(s): T. Peter Kingham, Hoang Cong Nguyen, Jianbao Zheng, Ioannis T. Konstantinidis, Eran Sadot, Jinru Shia, Deborah Kuk, Steven Zhang, Leonard Saltz, Michael I. D’Angelica, William R. Jarnagin, Hani Goodarzi, Sohail F. Tavazoie
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.17448
Characterization of mouse serum exosomal small RNA content: The origins and their roles in modulating inflammatory response
Cited by: 25
Author(s): Xin Zhou, Zinan Jiao, Juling Ji, Shuyuan Li, Xiaodi Huang, Xiaoshuang Lu, Heng Zhao, Jingwen Peng, Xinya Chen, Qiuhong Ji, Yuhua Ji
Software Mentions: 1
Published: over 9 years ago
10.18632/oncotarget.16788
Next-generation sequencing reveals microRNA markers of adrenocortical tumors malignancy
Cited by: 31
Author(s): Łukasz Koperski, Marta Kotlarek, Michał Świerniak, Monika Kolanowska, Anna Klinke, Barbara Górnicka, Krystian Jażdżewski, Anna Wójcicka
Software Mentions: 1
Published: over 9 years ago
10.18632/oncotarget.24138
Analysis of a gene panel for targeted sequencing of colorectal cancer samples
Cited by: 8
Author(s): Klaus H. Jensen, José M. G. Izarzugaza, Agnieszka Sierakowska Juncker, Rasmus Borup Hansen, Torben Frøstrup Hansen, Pascal Timshel, Thórarinn Blöndal, Thomas Skøt Jensen, Eske Rygaard-Hjalsted, Peter Marynen, Michael Thorsen, Rasmus Wernersson, Henrik Bjørn Nielsen, Anders Jakobsen, Søren Brunak, Flemming Brandt Sørensen
Software Mentions: 1
Published: over 8 years ago