Ecosyste.ms: Papers

10.1016/j.biopsycho.2010.06.007

Dynamic causal modelling of anticipatory skin conductance responses
Cited by: 77
Author(s): Dominik R. Bach, Jean Daunizeau, Karl J. Friston, Raymond J. Dolan
Software Mentions: 1
Published: about 14 years ago

10.1523/ENEURO.0013-17.2017

Neurochemical Heterogeneity Among Lateral Hypothalamic Hypocretin/Orexin and Melanin-Concentrating Hormone Neurons Identified Through Single-Cell Gene Expression Analysis
Cited by: 83
Author(s): Laura E Mickelsen, Fredrick W. Kolling, Brock Chimileski, Akie Fujita, Carol R. Norris, Kun Chen, Craig E. Nelson, Alexander C. Jackson
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.53229

Cerebellar Purkinje cell activity modulates aggressive behavior
Cited by: 27
Author(s): Skyler L. Jackman, Christopher H. Chen, Heather L Offermann, Iain R Drew, Bailey M Harrison, Anna M Bowman, Katelyn M Flick, Isabella Flaquer, Wade G. Regehr
Software Mentions: 1
Published: over 4 years ago

10.1016/j.biopsych.2019.12.013

Cholinergic Modulation of Disorder-Relevant Neural Circuits in Generalized Anxiety Disorder
Cited by: 15
Author(s): Toby Wise, Fiona Patrick, Nicholas Meyer, Ndaba Mazibuko, Alice Oates, Anne H.M. van der Bijl, Philippe Danjou, Susan O’Connor, Elizabeth Doolin, Caroline Wooldridge, Deborah Rathjen, Christine Macare, Steven Williams, Adam Perkins, Allan H. Young
Software Mentions: 1
Published: over 4 years ago

10.1242/bio.015750

<i>Prickle1</i>mutation causes planar cell polarity and directional cell migration defects associated with cardiac outflow tract anomalies and other structural birth defects
Cited by: 42
Author(s): Brian Gibbs, Rama Rao Damerla, Eszter K. Vladar, Bishwanath Chatterjee, Yong Wan, Xiaoqin Liu, Cheng Cui, George C. Gabriel, Maliha Zahid, Hisato Yagi, Heather L. Szabo-Rogers, Kaye Suyama, Jeffrey Axelrod, Cecilia W. Lo
Software Mentions: 1
Published: almost 9 years ago

10.1186/2046-1682-6-3

Wavelet-based protocols for ion channel electrophysiology
Cited by: 10
Author(s): Armin Kargol
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-018-33417-8

Raman spectroscopic detection of high-grade cervical cytology: Using morphologically normal appearing cells
Cited by: 26
Author(s): Shiyamala Duraipandian, Damien Traynor, Padraig Kearney, Cara Martin, John O’Leary, Fiona M. Lyng
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-34459-8

Comparative analysis of the Pocillopora damicornis genome highlights role of immune system in coral evolution
Cited by: 93
Author(s): Ross Cunning, Rachael A. Bay, Phillip Gillette, Andrew C. Baker, Nikki Traylor-Knowles
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-34966-8

The Virtual-Environment-Foraging Task enables rapid training and single-trial metrics of attention in head-fixed mice
Cited by: 10
Author(s): Martha N. Havenith, Peter M. Zijderveld, Sabrina van Heukelum, Shaghayegh Abghari, Jeffrey Glennon, Paul Tiesinga
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-35603-0

Genome-wide DNA methylation changes in CD19+ B cells from relapsing-remitting multiple sclerosis patients
Cited by: 40
Author(s): Vicki E. Maltby, Rodney Arthur Lea, Moira C. Graves, Katherine A. Sanders, Miles C. Benton, Lotti Tajouri, Rodney J. Scott, Jeannette Lechner‐Scott
Software Mentions: 1
Published: almost 6 years ago

10.1523/ENEURO.0376-19.2020

Differential Modulation of Ventral Tegmental Area Circuits by the Nociceptin/Orphanin FQ System
Cited by: 11
Author(s): Joseph R. Driscoll, Tanya L. Wallace, Kasra Mansourian, William J. Martin, Elyssa B. Margolis
Software Mentions: 1
Published: over 4 years ago

10.1186/1745-6150-8-2

Deep transcriptome-sequencing and proteome analysis of the hydrothermal vent annelid Alvinella pompejana identifies the CvP-bias as a robust measure of eukaryotic thermostability
Cited by: 47
Author(s): Thomas Holder, Claire Basquin, J. Ebert, Nadine Randel, Didier Jollivet, Elena Conti, Gáspár Jékely, Fulvia Bono
Software Mentions: 1
Published: almost 12 years ago

10.1186/1745-6150-7-25

Integrative transcriptome analysis suggest processing of a subset of long non-coding RNAs to small RNAs
Cited by: 48
Author(s): Saakshi Jalali, Gopal Gunanathan Jayaraj, Vinod Scaria
Software Mentions: 1
Published: over 12 years ago

10.1523/ENEURO.0407-18.2018

Prefrontal Theta Oscillations Promote Selective Encoding of Behaviorally Relevant Events
Cited by: 16
Author(s): Justin Jarovi, Julien Volle, Xiaotian Yu, Lisa Guan, Kaori Takehara‐Nishiuchi
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-40233-1

Evaluation of detection probabilities at the water-filtering and initial PCR steps in environmental DNA metabarcoding using a multispecies site occupancy model
Cited by: 68
Author(s): Hideyuki Doi, Keiichi Fukaya, Shin-ichiro Oka, Keiichi Sato, Michio Kondo, Masaki Miya
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-40546-1

Signs of biological activities of 28,000-year-old mammoth nuclei in mouse oocytes visualized by live-cell imaging
Cited by: 23
Author(s): Kazuya Yamagata, Koutatsu Nagai, Hiroshi Miyamoto, Masayuki Anzai, Hiromi Kato, Kazuaki Miyamoto, Satoshi Kurosaka, Rika Azuma, И. И. Колодезников, А. В. Протопопов, В. В. Плотников, Hisato Kobayashi, Ryouka Kawahara-Miki, Toru Kono, Masao Uchida, Yasuyuki Shibata, Tetsuya Handa, Hiroshi Kimurâ, Yoshihiko Hosoi, Tomohiko Mitani, Kazuya Matsumoto, Akira Iritani
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-41215-z

Targeted Single Primer Enrichment Sequencing with Single End Duplex-UMI
Cited by: 16
Author(s): Peng Quan, Chang Xu, Daniel Kim, Marcus Lewis, John DiCarlo, Yexun Wang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-41250-w

The Virtual-Environment-Foraging Task enables rapid training and single-trial metrics of rule acquisition and reversal in head-fixed mice
Cited by: 4
Author(s): Martha N. Havenith, Peter M. Zijderveld, Sabrina van Heukelum, Shaghayegh Abghari, Paul Tiesinga, Jeffrey Glennon
Software Mentions: 1
Published: over 5 years ago

10.4269/ajtmh.15-0401

Whole Genome Shotgun Sequencing Shows Selection on Leptospira Regulatory Proteins During in vitro Culture Attenuation
Cited by: 9
Author(s): Jason Lehmann, Victoria C. Corey, Jessica N. Ricaldi, Joseph M. Vinetz, Elizabeth A. Winzeler, Michael Matthias
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-019-42729-2

A library of Neo Open Reading Frame peptides (NOPs) as a sustainable resource of common neoantigens in up to 50% of cancer patients
Cited by: 21
Author(s): Jan Koster, Ronald H.A. Plasterk
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-43088-8

Identification and characterization of pineapple leaf lncRNAs in crassulacean acid metabolism (CAM) photosynthesis pathway
Cited by: 16
Author(s): Youhuang Bai, Xiaozhuan Dai, Yang Li, Lulu Wang, Weimin Liu, Qing Liu, Yan Cheng, Yuan Qin
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-45266-0

Transcriptome analysis provides insights into the stress response crosstalk in apple (Malus × domestica) subjected to drought, cold and high salinity
Cited by: 23
Author(s): Xingliang Li, Minji Li, Beibei Zhou, Yuzhang Yang, Qinping Wei, Junke Zhang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-46609-7

Large-scale viral genome analysis identifies novel clinical associations between hepatitis B virus and chronically infected patients
Cited by: 11
Author(s): Ondřej Podlaha, Edward Gane, M.R. Brunetto, Scott Fung, Wan–Long Chuang, Calvin Q. Pan, Zhaoshi Jiang, Yang Liu, Neeru Bhardwaj, Prasenjit Mukherjee, John F. Flaherty, Anuj Gaggar, Mani Subramanian, Namiki Izumi, S. Shalimar, Young‐Suk Lim, Patrick Marcellin, María Buti, Henry Lik‐Yuen Chan, Kosh Agarwal
Software Mentions: 1
Published: over 5 years ago

10.1186/1745-6150-4-8

A comparative genomics study of genetic products potentially encoding ladderane lipid biosynthesis
Cited by: 30
Author(s): Jayne E. Rattray, Marc Strous, Huub J. M. Op den Camp, Stefan Schouten, Mike S. M. Jetten, Jaap S Sinninghe Damsté
Software Mentions: 1
Published: almost 16 years ago

10.1038/s41598-019-47708-1

Correlation between early dynamics in circulating tumour DNA and outcome from FOLFIRI treatment in metastatic colorectal cancer
Cited by: 22
Author(s): Iben Lyskjær, C. Kronborg, Mads Heilskov Rasmussen, Boe Sandahl Sørensen, Christina Demuth, Mona Rosenkilde, Amanda Frydendahl Boll Johansen, Michael Knudsen, Søren Vang, Susanne Krag, Karen‐Lise Garm Spindler, Claus Lindbjerg Andersen
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-49302-x

Juxta-membrane S-acylation of plant receptor-like kinases is likely fortuitous and does not necessarily impact upon function
Cited by: 15
Author(s): Charlotte H. Hurst, Kathryn M. Wright, Dionne Turnbull, Kerry Leslie, Susan R. Jones, Piers A. Hemsley
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-49936-x

Cold exposure induces dynamic, heterogeneous alterations in human brown adipose tissue lipid content
Cited by: 23
Author(s): Crystal L. Coolbaugh, Bruce M. Damon, Emily Bush, E. Brian Welch, Theodore F. Towse
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-50226-9

L-type voltage-gated calcium channel regulation of in vitro human cortical neuronal networks
Cited by: 21
Author(s): William Plumbly, Nicholas J. Brandon, Tarek Z. Deeb, Jérémy Hall, Adrian J. Harwood
Software Mentions: 1
Published: about 5 years ago

10.1116/1.4943618

Differential surface activation of the A1 domain of von Willebrand factor
Cited by: 10
Author(s): Elaine H. Tronic, Olga Yakovenko, Tobias Weidner, Joe E. Baio, Rebecca Penkala, David G. Castner, Wendy E. Thomas
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-020-57595-6

Ventral striatum supports Methylphenidate therapeutic effects on impulsive choices expressed in temporal discounting task
Cited by: 19
Author(s): Eva Martínez, Benjamin Pasquereau, Guillaume Drui, Yosuke Saga, Élise Météreau, Léon Tremblay
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-57880-4

Adaptive introgression from indicine cattle into white cattle breeds from Central Italy
Cited by: 37
Author(s): Mario Barbato, Frank Hailer, Maulik Upadhyay, Marcello Del Corvo, Licia Colli, Riccardo Negrini, Eui-Soo Kim, R.P.M.A. Crooijmans, Tad S. Sonstegard, Paolo Ajmone‐Marsan
Software Mentions: 1
Published: almost 5 years ago

10.3390/bioengineering8090117

Machine Learning Prediction Models for Mitral Valve Repairability and Mitral Regurgitation Recurrence in Patients Undergoing Surgical Mitral Valve Repair
Cited by: 4
Author(s): Marco Penso, Mauro Pepi, Valentina Mantegazza, C. Claudia, Manuela Muratori, Laura Fusini, Paola Gripari, Sarah Ali, Enrico G. Caiani, Gloria Tamborini
Software Mentions: 1
Published: about 3 years ago

10.1107/S2059798321001935

Cryo-EM of kinesin-binding protein: challenges and opportunities from protein-surface interactions
Cited by: 0
Author(s): Joseph Atherton, Carolyn A. Moores
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms20112635

Multi-Walled Carbon Nanotube-Induced Gene Expression Biomarkers for Medical and Occupational Surveillance
Cited by: 10
Author(s): Brandi N. Snyder-Talkington, Chunlin Dong, Salvi Singh, Rebecca Raese, Yong Qian, Dale W. Porter, Michael G. Wolfarth, Nancy Lan Guo
Software Mentions: 1
Published: over 5 years ago

10.1186/s13040-015-0057-1

Network analysis reveals stage-specific changes in zebrafish embryo development using time course whole transcriptome profiling and prior biological knowledge
Cited by: 1
Author(s): Yuji Zhang
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-60939-x

Theileria parasites subvert E2F signaling to stimulate leukocyte proliferation
Cited by: 10
Author(s): Kyle Tretina, Malak Haidar, Sally A. Madsen‐Bouterse, Takaya Sakura, Sara Mfarrej, Lindsay M. Fry, Marie Chaussepied, Arnab Pain, Donald P. Knowles, Vishvanath Nene, Doron Ginsberg, Claudia Daubenberger, Richard P. Bishop, Gordon Langsley, Joana C. Silva
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-61190-0

Gene-flow from steppe individuals into Cucuteni-Trypillia associated populations indicates long-standing contacts and gradual admixture
Cited by: 15
Author(s): Alexander Immel, Stanislav Țerna, Angela Simalcsik, Julian Susat, Oleg Šarov, Ghenadie Sîrbu, Robert Hofmann, Johannes Müller, Almut Nebel, Ben Krause‐Kyora
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-61269-8

Assessment of the human bone lacuno-canalicular network at the nanoscale and impact of spatial resolution
Cited by: 25
Author(s): Boliang Yu, Alexandra Pacureanu, Cécile Olivier, Peter Cloetens, Françoise Peyrin
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-62555-1

µgreen-db: a reference database for the 23S rRNA gene of eukaryotic plastids and cyanobacteria
Cited by: 12
Author(s): Christophe Djemiel, Damien Plassard, Sébastien Terrat, Olivier Crouzet, Joana Sauze, Samuel Mondy, Virginie Nowak, Lisa Wingate, Jérôme Ogée, Pierre‐Alain Maron
Software Mentions: 1
Published: over 4 years ago

10.1186/1756-0500-7-111

False positives complicate ancient pathogen identifications using high-throughput shotgun sequencing
Cited by: 30
Author(s): Michael G. Campana, Nelly M. Robles García, Frank J Rühli, Noreen Tuross
Software Mentions: 1
Published: over 10 years ago

10.1186/s12915-019-0656-2

Pivoting of microtubules driven by minus-end-directed motors leads to spindle assembly
Cited by: 19
Author(s): Lora Winters, Ivana Ban, Marcel Prelogović, Iana Kalinina, Nenad Pavin, Iva Marija Tolić
Software Mentions: 1
Published: over 5 years ago

10.1186/1756-0500-6-482

Nitrogen starvation-induced transcriptome alterations and influence of transcription regulator mutants in Mycobacterium smegmatis
Cited by: 15
Author(s): Nadja Jeßberger, Yinhua Lü, Johannes Amon, Fritz Titgemeyer, Sophia Sonnewald, Stephen Reid, Andreas Burkovski
Software Mentions: 1
Published: almost 11 years ago

10.1523/ENEURO.0383-20.2020

Neural Selectivity for Visual Motion in Macaque Area V3A
Cited by: 9
Author(s): Nardin Nakhla, Yavar Korkian, Matthew R. Krause, Christopher C. Pack
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-020-66007-8

Faecal DNA to the rescue: Shotgun sequencing of non-invasive samples reveals two subspecies of Southeast Asian primates to be Critically Endangered species
Cited by: 10
Author(s): Andie Ang, Dewi Imelda Roesma, Vincent Nijman, Rudolf Meier, Amrita Srivathsan, Rizaldi
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-67276-z

Input dependent modulation of olfactory bulb activity by HDB GABAergic projections
Cited by: 24
Author(s): Erik Böhm, Daniela Brunert, Markus Rothermel
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-68783-9

The DMCdrive: practical 3D-printable micro-drive system for reliable chronic multi-tetrode recording and optogenetic application in freely behaving rodents
Cited by: 7
Author(s): Hoseok Kim, Hans Sperup Brünner, Marie Carlén
Software Mentions: 1
Published: over 4 years ago

10.1186/s12859-016-1113-7

Assessment of transfer methods for comparative genomics of regulatory networks in bacteria
Cited by: 8
Author(s): Sefa Kılıç, Ivan Erill
Software Mentions: 1
Published: over 8 years ago

10.1186/s12859-019-2876-4

NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline
Cited by: 62
Author(s): Ryan O. Schenck, Eszter Lakatos, Chandler D. Gatenbee, Trevor A. Graham, Alexander R.A. Anderson
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2229-9-125

Sampling nucleotide diversity in cotton
Cited by: 77
Author(s): Allen Van Deynze, Kevin Stoffel, Mike Lee, Thea A. Wilkins, Alexander Kozik, R. G. Cantrell, John Z. Yu, Russel J Kohel, David M. Stelly
Software Mentions: 1
Published: almost 16 years ago

10.1038/s41598-020-72037-z

Direct-write orientation of charge-transfer liquid crystals enables polarization-based coding and encryption
Cited by: 4
Author(s): Madeline Van Winkle, Harper O. W. Wallace, Niquana Smith, Andrew Pomerene, Michael G. Wood, Bryan Kaehr, Joseph J. Reczek
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms21155549

Genome-Wide Analysis Reveals Changes in Long Noncoding RNAs in the Differentiation of Canine BMSCs into Insulin-Producing Cells
Cited by: 4
Author(s): Jinglu Wang, Pengxiu Dai, Dengke Gao, Xia Zhang, Chenmei Ruan, Jiakai Li, Yijing Chen, Luwen Zhang, Yihua Zhang
Software Mentions: 1
Published: over 4 years ago

10.5713/ajas.18.0065

Comparison of reducing sugar content, sensory traits, and fatty acids and volatile compound profiles of the longissimus thoracis among Korean cattle, Holsteins, and Angus steers
Cited by: 28
Author(s): Min Yu Piao, Hyun Jung Lee, Hae In Yong, Seok-Hyeon Beak, Hyun Jin Kim, Cheorun Jo, I Komang Gede Wiryawan, Myunggi Baik
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-74483-1

Large scale, robust, and accurate whole transcriptome profiling from clinical formalin-fixed paraffin-embedded samples
Cited by: 21
Author(s): Yulia Newton, Andrew J. Sedgewick, Luis Cisneros, Justin Golovato, Mark R. Johnson, Christopher Szeto, Shahrooz Rabizadeh, J. Zachary Sanborn, Stephen C. Benz, Charles J. Vaske
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-75890-0

Identification of HMGA2 inhibitors by AlphaScreen-based ultra-high-throughput screening assays
Cited by: 19
Author(s): Linjia Su, Nadezda Bryan, Sabrina Battista, Juliano T. Freitas, Alyssa Garabedian, Federica D’Alessio, M. Romanò, Fabiana Falanga, Alfredo Fusco, Lidia Kos, Jeremy W. Chambers, Francisco Fernandez‐Lima, Prem P. Chapagain, Stefan Vasile, Layton H. Smith, Fenfei Leng
Software Mentions: 1
Published: about 4 years ago

10.1186/s12870-021-03204-1

Phylogenetic analysis and development of molecular markers for five medicinal Alpinia species based on complete plastome sequences
Cited by: 16
Author(s): Hongju Yang, Liqiang Wang, Haimei Chen, Mei Jiang, Wuwei Wu, Shengyu Liu, Jiehua Wang, Chang Liu
Software Mentions: 1
Published: about 3 years ago

10.3390/ijms22105188

A Nano-Emulsion Platform Functionalized with a Fully Human scFv-Fc Antibody for Atheroma Targeting: Towards a Theranostic Approach to Atherosclerosis
Cited by: 10
Author(s): Samuel Bonnet, Geoffrey Prévot, Stéphane Mornet, Marie‐Josée Jacobin‐Valat, Yannick Mousli, Audrey Hémadou, Mathieu Duttine, Aurélien J. Trotier, Sandrine Sanchez, Martine Duonor-Cérutti, Sylvie Crauste–Manciet, Gisèle Clofent‐Sanchez
Software Mentions: 1
Published: over 3 years ago

10.1186/s12870-019-2032-3

Transcriptome profiling and environmental linkage to salinity across Salicornia europaea vegetation
Cited by: 15
Author(s): Bliss Ursula Furtado, István Nagy, Torben Asp, Jarosław Tyburski, Monika Skorupa, Marcin Gołębiewski, Piotr Hulisz, Katarzyna Hrynkiewicz
Software Mentions: 1
Published: about 5 years ago

10.1186/s13075-020-2127-0

High-throughput quantitative histology in systemic sclerosis skin disease using computer vision
Cited by: 7
Author(s): Chase Correia, Seamus Mawe, Shane Lofgren, Roberta Gonçalves Marangoni, Jung Hwa Lee, Rana Saber, Kathleen Aren, Michelle Cheng, Shannon Teaw, Aileen Hoffmann, Isaac Goldberg, Shawn E. Cowper, Purvesh Khatri, Monique Hinchcliff, James Mahoney
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-82340-y

Pupillometry as a reliable metric of auditory detection and discrimination across diverse stimulus paradigms in animal models
Cited by: 9
Author(s): Pilar Montes-Lourido, Manaswini Kar, Isha Kumbam, Srivatsun Sadagopan
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12870-021-03111-5

Genome wide association study of agronomic and seed traits in a world collection of proso millet (Panicum miliaceum L.)
Cited by: 17
Author(s): Sameh Boukail, Mercy Macharia, Mara Miculan, Alberto Masoni, Alessandro Calamai, Enrico Palchetti, Matteo Dell’Acqua
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-85128-2

Noninvasive prenatal testing for β-thalassemia by targeted nanopore sequencing combined with relative haplotype dosage (RHDO): a feasibility study
Cited by: 15
Author(s): Fuman Jiang, Weiqiang Liu, Longmei Zhang, Yaosong Guo, Min Chen, Xiaojing Zeng, Yan Wang, Yufan Li, Jiajia Xian, Bole Du, Yuhuan Xie, Shuming Ouyang, Sheng Li, Yinghong Yang, Chunsheng Zhang, Fei Luo, Xiaofang Sun
Software Mentions: 1
Published: over 3 years ago

10.1186/s12870-019-1792-0

Integrated analysis of mRNA-seq and miRNA-seq in calyx abscission zone of Korla fragrant pear involved in calyx persistence
Cited by: 10
Author(s): Lan Ma, Li Zhou, Shaowen Quan, Hang Xu, Jieping Yang, Jianxin Niu
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-87307-7

Basmisanil, a highly selective GABAA-α5 negative allosteric modulator: preclinical pharmacology and demonstration of functional target engagement in man
Cited by: 9
Author(s): Joerg F. Hipp, Frédéric Knoflach, Robert A. Comley, Theresa M. Ballard, Michael Honer, Gerhard Trube, Rodolfo Gasser, Eric Prinssen, Tanya L. Wallace, Andreas Rothfuß, Henner Knust, Sian Lennon-Chrimes, Michael Derks, Darren Bentley, Lisa Squassante, Stephane Navé, Jana Nöldeke, Christoph Wandel, Andrew W. Thomas, Maria‐Clemencia Hernandez
Software Mentions: 1
Published: over 3 years ago

10.1002/aps3.11345

A two‐tier bioinformatic pipeline to develop probes for target capture of nuclear loci with applications in Melastomataceae
Cited by: 23
Author(s): Johanna R. Jantzen, Prabha Amarasinghe, Ryan A. Folk, Marcelo Reginato, Fabián A. Michelangeli, Douglas E. Soltis, Nico Cellinese, Pamela S. Soltis
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms221910898

Characterizing Binding Interactions That Are Essential for Selective Transport through the Nuclear Pore Complex
Cited by: 5
Author(s): Kathleen M. Lennon, Mohammad Soheilypour, Mohaddeseh Peyro, Devin L. Wakefield, Grace E. Choo, Mohammad R. K. Mofrad, Tijana Jovanovic-Talisman
Software Mentions: 1
Published: about 3 years ago

10.1038/s41598-021-87478-3

Transcriptional profiles in Strongyloides stercoralis males reveal deviations from the Caenorhabditis sex determination model
Cited by: 5
Author(s): Damia Gonzalez Akimori, Emily J. Dalessandro, Thomas J. Nolan, Christopher R. Stieha, James B. Lok, Jonathan D. C. Stoltzfus
Software Mentions: 1
Published: over 3 years ago

10.2196/jmir.4476

Characterizing Sleep Issues Using Twitter
Cited by: 81
Author(s): David J McIver, Joseph E. Hawkins, Rumi Chunara, Arnaub K. Chatterjee, Aman Bhandari, Timothy P. Fitzgerald, Sachin H. Jain, John S. Brownstein
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2229-11-147

Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum)
Cited by: 30
Author(s): Joanne Russell, Micha Bayer, Clare Booth, Linda Cardle, Christine A. Hackett, Pete E. Hedley, Linzi Jorgensen, Jenny Morris, Rex Brennan
Software Mentions: 1
Published: almost 14 years ago

10.1038/s41598-021-90833-z

A high-throughput microfluidic bilayer co-culture platform to study endothelial-pericyte interactions
Cited by: 19
Author(s): Miles Rogers, Ashley L. Gard, R Gaibler, Thomas J. Mulhern, Rivka Strelnikov, Hesham Azizgolshani, Brian P. Cain, Brett C. Isenberg, Nerses J. Haroutunian, Nicole Raustad, Philip M. Keegan, Matthew P. Lech, Lindsay Tomlinson, Jeffrey T. Borenstein, Joseph L. Charest, Corin Williams
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-96188-9

Bone conducted responses in the neonatal rat auditory cortex
Cited by: 5
Author(s): Roman Makarov, Mikhail Sintsov, Guzel Valeeva, Pavel Starikov, Д. А. Негров, Roustem Khazipov
Software Mentions: 1
Published: over 3 years ago

10.1186/s12870-018-1516-x

MicroRNA profiling analysis of developing berries for ‘Kyoho’ and its early-ripening mutant during berry ripening
Cited by: 19
Author(s): Da‐Long Guo, Qiong Li, Wen-Qing Lv, Guohai Zhang, Yi‐He Yu
Software Mentions: 1
Published: about 6 years ago

10.1186/s12883-021-02345-y

Positive DAT-SCAN in SPG7: a case report mimicking possible MSA-C
Cited by: 5
Author(s): Giuseppe Bellini, Eleonora Del Prete, Elisa Unti, Daniela Frosini, Gabriele Siciliano, Roberto Ceravolo
Software Mentions: 1
Published: about 3 years ago

10.1038/s41598-021-99350-5

Optogenetic stimulation of striatal patches modifies habit formation and inhibits dopamine release
Cited by: 7
Author(s): Jacob A. Nadel, Sean S. Pawelko, J. R. Scott, R. McLaughlin, Megan E. Fox, Marwan M. Ghanem, Ronell van der Merwe, Nick G. Hollon, Eric S. Ramsson, Christopher D. Howard
Software Mentions: 1
Published: about 3 years ago

10.1186/s11689-016-9166-5

Automatic cortical representation of auditory pitch changes in Rett syndrome
Cited by: 26
Author(s): John J. Foxe, Kelly M. Burke, Gizely N. Andrade, Aleksandra Djukic, Hans‐Peter Frey, Sophie Molholm
Software Mentions: 1
Published: about 8 years ago

10.1186/s12891-015-0652-9

Signature of microRNA expression during osteogenic differentiation of bone marrow MSCs reveals a putative role of miR-335-5p in osteoarthritis
Cited by: 34
Author(s): Pilar Tornero-Esteban, Luis Rodríguez‐Rodríguez, Lydia Abásolo, María C. Fernández Tome, Pedro López-Romero, Eva Herranz, Manuel A. González, Fernando Marco, Enrique Moro, Benjamín Fernández‐Gutiérrez, José Ramón Lamas
Software Mentions: 1
Published: over 9 years ago

10.1186/s12866-016-0782-8

Determining Streptococcus suis serotype from short-read whole-genome sequencing data
Cited by: 57
Author(s): Taryn Athey, Sarah Teatero, Sonia Lacouture, Daisuke Takamatsu, Marcelo Gottschalk, Nahuel Fittipaldi
Software Mentions: 1
Published: over 8 years ago

10.3390/s21051806

Development of a Low-Cost, Modular Muscle–Computer Interface for At-Home Telerehabilitation for Chronic Stroke
Cited by: 9
Author(s): Octavio Marin-Pardo, Coralie S. Phanord, Miranda R Donnelly, Christopher M. Laine, Sook‐Lei Liew
Software Mentions: 1
Published: over 3 years ago

10.1186/s12984-020-00721-2

Robotic tests for position sense and movement discrimination in the upper limb reveal that they each are highly reproducible but not correlated in healthy individuals
Cited by: 8
Author(s): Catherine R. Lowrey, Benett Blazevski, Jean-Luc Marnet, Helen Bretzke, Sean P. Dukelow, Stephen H. Scott
Software Mentions: 1
Published: over 4 years ago

10.1186/s12866-017-0958-x

Effectiveness of ITS and sub-regions as DNA barcode markers for the identification of Basidiomycota (Fungi)
Cited by: 112
Author(s): Fernanda Badotti, Francislon Silva de Oliveira, Cleverson Fernando Garcia, Aline B. M. Vaz, Paula Luize Camargos Fonseca, Laila Alves Nahum, Guilherme Oliveira, Aristóteles Góes-Neto
Software Mentions: 1
Published: over 7 years ago

10.1186/s12874-020-01067-y

Recruiting a representative sample of urban South Australian Aboriginal adults for a survey on alcohol consumption
Cited by: 14
Author(s): K. S. Kylie Lee, Michelle S. Fitts, James H. Conigrave, Catherine Zheng, Jimmy Perry, Scott Wilson, Dudley Ah Chee, Shane Bond, Keith Weetra, Tanya Chikritzhs, Tim Slade, Katherine M. Conigrave
Software Mentions: 1
Published: over 4 years ago

10.1186/s12881-017-0388-5

Exome sequencing identifies a novel TTC37 mutation in the first reported case of Trichohepatoenteric syndrome (THE-S) in South Africa
Cited by: 8
Author(s): Craig Kinnear, Brigitte Glanzmann, Eric Banda, Nikola Schlechter, Glenda Durrheim, Annika Neethling, Etienne Nel, Mardelle Schoeman, Glynis Johnson, Paul D. van Helden, Eileen G. Hoal, Monika Esser, Michael Urban, Marlo Möller
Software Mentions: 1
Published: over 7 years ago

10.1186/s12984-020-00684-4

Role of data measurement characteristics in the accurate detection of Parkinson’s disease symptoms using wearable sensors
Cited by: 42
Author(s): Nicholas Shawen, Megan K. O’Brien, Sanjeev Venkatesan, Luca Lonini, Tanya Simuni, Jamie Hamilton, Roozbeh Ghaffari, John A. Rogers, Arun Jayaraman
Software Mentions: 1
Published: over 4 years ago

10.1093/sysbio/syu080

Genomic Repeat Abundances Contain Phylogenetic Signal
Cited by: 105
Author(s): Steven Dodsworth, Mark W. Chase, Laura J. Kelly, Ilia J. Leitch, Jiří Macas, Petr Novák, Mathieu Piednoël, Hanna Weiss‐Schneeweiss, Andrew R. Leitch
Software Mentions: 1
Published: about 10 years ago

10.1007/s00122-018-3101-y

Molecular mapping and inheritance of restoration of fertility (Rf) in A4 hybrid system in pigeonpea (Cajanus cajan (L.) Millsp.)
Cited by: 29
Author(s): Rachit K. Saxena, Kalpesh Patel, C.V. Sameer Kumar, K. K. Tyagi, K B Saxena, Rajeev K. Varshney
Software Mentions: 1
Published: over 6 years ago

10.1186/s12879-020-05253-7

Occurrence of septuple and elevated Pfdhfr-Pfdhps quintuple mutations in a general population threatens the use of sulfadoxine-pyrimethamine for malaria prevention during pregnancy in eastern-coast of Tanzania
Cited by: 5
Author(s): George M. Bwire, Wigilya P. Mikomangwa, Manase Kilonzi
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0154881

Rhythmic Components in Extracranial Brain Signals Reveal Multifaceted Task Modulation of Overlapping Neuronal Activity
Cited by: 20
Author(s): Roemer van der Meij, Freek van Ede, Eric Maris
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0110136

Revealing a Brain Network Endophenotype in Families with Idiopathic Generalised Epilepsy
Cited by: 86
Author(s): Fahmida A Chowdhury, Wessel Woldman, Thomas H. B. FitzGerald, Robert Elwes, Lina Nashef, John R. Terry, Mark P. Richardson
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0025866

Differentiation between Vergence and Saccadic Functional Activity within the Human Frontal Eye Fields and Midbrain Revealed through fMRI
Cited by: 42
Author(s): Yelda Alkan, Bharat B. Biswal, Tara L. Alvarez
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0202833

Dynamic structure and composition of bone investigated by nanoscale infrared spectroscopy
Cited by: 27
Author(s): Laurianne Imbert, Samuel Gourion-Arsiquaud, Eduardo Villarreal-Ramírez, Lyudmila Spevak, Hayat Taleb, Marjolein C. H. van der Meulen, Richard Mendelsohn, Adele L. Boskey
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0109082

Cytoskeletal Dependence of Insulin Granule Movement Dynamics in INS-1 Beta-Cells in Response to Glucose
Cited by: 50
Author(s): Aoife T. Heaslip, Shane R. Nelson, Andrew T. Lombardo, Samantha Beck Previs, Jessica M. Armstrong, David M. Warshaw
Software Mentions: 1
Published: about 10 years ago

10.7150/thno.46911

<i>Salvia miltiorrhiza</i>-derived miRNAs suppress vascular remodeling through regulating OTUD7B/KLF4/NMHC IIA axis
Cited by: 17
Author(s): Gao-Shan Yang, Bin Zheng, Yan Qin, Jing Zhou, Zhan Yang, Xinhua Zhang, Hongyan Zhao, Haojie Yang, Jin‐Kun Wen
Software Mentions: 1
Published: almost 5 years ago

10.3390/cancers12092539

RASAL1 and ROS1 Gene Variants in Hereditary Breast Cancer
Cited by: 1
Author(s): Federica Isidori, Isotta Bozzarelli, Simona Ferrari, Lea Godino, Giovanni Innella, Daniela Turchetti, Elena Bonora
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0097591

Biomechanics of the Cornea Evaluated by Spectral Analysis of Waveforms from Ocular Response Analyzer and Corvis-ST
Cited by: 33
Author(s): Sushma Tejwani, Rohit Shetty, Mathew Kurien, Shoruba Dinakaran, Arkasubhra Ghosh, Abhijit Sinha Roy
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0169774

Examining Sources of Error in PCR by Single-Molecule Sequencing
Cited by: 200
Author(s): Vladimir Potapov, Jennifer L. Ong
Software Mentions: 1
Published: almost 8 years ago

10.1016/j.cell.2009.06.032

Actomyosin Is the Main Driver of Interkinetic Nuclear Migration in the Retina
Cited by: 231
Author(s): Caren Norden, Stephen Young, Brian A. Link, William A. Harris
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0216601

Phenology of Drosophila species across a temperate growing season and implications for behavior
Cited by: 10
Author(s): Jennifer M. Gleason, Paula R. Roy, Elizabeth R. Everman, Terry C. Gleason, Theodore J. Morgan
Software Mentions: 1
Published: over 5 years ago

10.7150/thno.55106

Computed tomography imaging of macrophage phagocytic activity in abdominal aortic aneurysm
Cited by: 6
Author(s): Jakub Toczek, Parnaz Boodagh, Nowshin Sanzida, Mean Ghim, Mani Salarian, Kiran Gona, Gunjan Kukreja, Saranya Rajendran, Limin Wei, Joungho Han, Jiasheng Zhang, Jaejoon Jung, Morven Graham, Xinran Liu, Mehran M. Sadeghi
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pone.0095437

Conserved Noncoding Elements Follow Power-Law-Like Distributions in Several Genomes as a Result of Genome Dynamics
Cited by: 24
Author(s): Dimitris Polychronopoulos, Diamantis Sellis, Yannis Almirantis
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0167752

Sepsis and Hemocyte Loss in Honey Bees (Apis mellifera) Infected with Serratia marcescens Strain Sicaria
Cited by: 57
Author(s): Nancy L. Burritt, Nicole J. Foss, Eric C. Neeno-Eckwall, James O. Church, Anna M. Hilger, Jacob A. Hildebrand, David M. Warshauer, Nicole T. Perna, James B. Burritt
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41419-019-1538-9

Dynamic interplay between H-current and M-current controls motoneuron hyperexcitability in amyotrophic lateral sclerosis
Cited by: 27
Author(s): Yossi Buskila, Orsolya Kékesi, Alba Bellot-Saez, Wei Lin Seah, Tracey Berg, Michael Trpceski, Justin J. Yerbury, Lezanne Ooi
Software Mentions: 1
Published: over 5 years ago