pypi: custom | Projects | Ecosyste.ms: Papers

10.7554/eLife.52289

Medial entorhinal cortex activates in a traveling wave in the rat
Cited by: 16
Author(s): J. Jesús Hernández-Pérez, Keiland W Cooper, Ehren L. Newman
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.ppat.1000459

Comparative Genomic Characterization of Francisella tularensis Strains Belonging to Low and High Virulence Subspecies
Cited by: 115
Author(s): Mia D. Champion, Qiandong Zeng, Eli B. Nix, Francis E. Nano, Paul Keim, Chinnappa D. Kodira, Mark Borowsky, Sarah Young, Michael Koehrsen, Reinhard Engels, Matthew D. Pearson, Clint Howarth, Lisa M. Larson, Jared White, Lucía Alvarado, Mats Forsman, Scott W. Bearden, Anders Sjöstedt, Richard W. Titball, Stephen L. Michell, Bruce W. Birren, James E. Galagan
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2164-15-105

Distinct chromatin features characterize different classes of repeat sequences in Drosophila melanogaster
Cited by: 10
Author(s): Kristina Krassovsky, Steven Henikoff
Software Mentions: 1
Published: almost 11 years ago

10.1186/s13229-020-00375-w

Enhanced social learning of threat in adults with autism
Cited by: 5
Author(s): Lisa Espinosa, Johan Lundin Kleberg, Björn Hofvander, Steve Berggren, Sven Bölte, Andreas Olsson
Software Mentions: 1
Published: about 4 years ago

10.3390/ani11071871

SINE Insertion in the Intron of Pig GHR May Decrease Its Expression by Acting as a Repressor
Cited by: 6
Author(s): Cai Chen, Yao Zheng, Mengli Wang, Eduard Muráni, Enrico D’Alessandro, Ali Shoaib Moawad, Xiaoyan Wang, Klaus Wimmers, Chengyi Song
Software Mentions: 1
Published: over 3 years ago

10.1186/s13229-020-00391-w

Pharmacological intervention to restore connectivity deficits of neuronal networks derived from ASD patient iPSC with a TSC2 mutation
Cited by: 25
Author(s): Mouhamed Alsaqati, Vivi M. Heine, Adrian J. Harwood
Software Mentions: 1
Published: about 4 years ago

10.1186/s13100-017-0095-y

Viral communities of the human gut: metagenomic analysis of composition and dynamics
Cited by: 105
Author(s): Varun Aggarwala, Guanxiang Liang, Frederic D. Bushman
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.ppat.1003175

A Phyletically Rare Gene Promotes the Niche-specific Fitness of an E. coli Pathogen during Bacteremia
Cited by: 19
Author(s): Travis J. Wiles, J. Paul Norton, Sara N. Smith, Adam Lewis, Harry L. T. Mobley, Sherwood Casjens, Matthew Mulvey
Software Mentions: 1
Published: almost 12 years ago

10.1186/1759-8753-4-19

Endonuclease-containing Penelope retrotransposons in the bdelloid rotifer Adineta vaga exhibit unusual structural features and play a role in expansion of host gene families
Cited by: 20
Author(s): Irina R. Arkhipova, Irina A. Yushenova, Fernando Rodríguez
Software Mentions: 1
Published: almost 12 years ago

10.3390/microorganisms8111790

Genetic Adaptation of Coxsackievirus B1 during Persistent Infection in Pancreatic Cells
Cited by: 11
Author(s): Anni Honkimaa, Bryn Kimura, Amir‐Babak Sioofy‐Khojine, Jake Lin, Jutta E. Laiho, Sami Oikarinen, Heikki Hyöty
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.ppat.1007305

Concurrent infection with Mycobacterium tuberculosis confers robust protection against secondary infection in macaques
Cited by: 64
Author(s): Anthony M. Cadena, Forrest Hopkins, Pauline Maiello, Allison F. Carey, Eileen A. Wong, Constance Martin, Hannah P. Gideon, Robert M. DiFazio, Peter Andersen, Philana Ling Lin, Sarah M. Fortune, JoAnne L. Flynn
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.ppat.1008076

Chromatin dynamics and the transcriptional competence of HSV-1 genomes during lytic infections
Cited by: 21
Author(s): Mi Yao Hu, Daniel P. Depledge, Esteban Flores Cortes, Judith Breuer, Luis M. Schang
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009560

Mutational pressure by host APOBEC3s more strongly affects genes expressed early in the lytic phase of herpes simplex virus-1 (HSV-1) and human polyomavirus (HPyV) infection
Cited by: 8
Author(s): Maxwell Shapiro, Laurie T. Krug, Thomas MacCarthy
Software Mentions: 1
Published: over 3 years ago

10.1098/rspb.2018.1681

Control of seminal fluid protein expression via regulatory hubs in Drosophila melanogaster
Cited by: 14
Author(s): Irina Mohorianu, Emily K. Fowler, Tamás Dalmay, Tracey Chapman
Software Mentions: 1
Published: about 6 years ago

10.1098/rspb.2020.1960

Contrasted histories of organelle and nuclear genomes underlying physiological diversification in a grass species
Cited by: 15
Author(s): Matheus E Bianconi, Luke T. Dunning, Emma V. Curran, Oriane Hidalgo, Robyn F. Powell, Sahr Mian, Ilia J. Leitch, Marjorie R. Lundgren, Sophie Manzi, Maria S. Vorontsova, Guillaume Besnard, Colin P. Osborne, Jill K. Olofsson, Pascal‐Antoine Christin
Software Mentions: 1
Published: about 4 years ago

10.1098/rspb.2021.0148

Ecological dynamics of terrestrial and freshwater ecosystems across three mid-Phanerozoic mass extinctions from northwest China
Cited by: 9
Author(s): Yuangeng Huang, Zhong‐Qiang Chen, Peter D. Roopnarine, Michael J. Benton, Wan Yang, Jun Liu, Laishi Zhao, Zhenhua Li, Zhen Guo
Software Mentions: 1
Published: over 3 years ago

10.1073/pnas.1919888117

Pleiotropy complicates a trade-off between phage resistance and antibiotic resistance
Cited by: 133
Author(s): Alita R. Burmeister, Abigail V. Fortier, Carli Roush, Adam J. Lessing, Rose G Bender, Roxanna Barahman, R Campbell Grant, Benjamin K Chan, Paul Turner
Software Mentions: 1
Published: over 4 years ago

10.1073/pnas.2011656117

Spatial heterogeneity can lead to substantial local variations in COVID-19 timing and severity
Cited by: 84
Author(s): Loring J. Thomas, Peng Huang, Fan Yin, Xiaoshuang Iris Luo, Zack W. Almquist, John R. Hipp, Carter T. Butts
Software Mentions: 1
Published: about 4 years ago

10.1073/pnas.2013432117

Goal-directed and stimulus-driven selection of internal representations
Cited by: 34
Author(s): Freek van Ede, Alexander G. Board, Anna C. Nobre
Software Mentions: 1
Published: about 4 years ago

10.3390/microorganisms9071446

The Role of the Respiratory Microbiome and Viral Presence in Lower Respiratory Tract Infection Severity in the First Five Years of Life
Cited by: 4
Author(s): Ivo Hoefnagels, Josephine van de Maat, Jeroen J. A. van Kampen, Annemarie M. C. van Rossum, Charlie C. Obihara, Gerdien A Tramper-Stranders, Astrid P. Heikema, Willem de Koning, Anne-Marie van Wermerskerken, Deborah Horst-Kreft, Gertjan J. Driessen, Janine Punt, Frank J Smit, Andrew Stubbs, Jeroen G. Noordzij, John P. Hays, Rianne Oostenbrink
Software Mentions: 1
Published: over 3 years ago

10.1128/JVI.02003-18

Interferon-Induced Transmembrane Protein 1 Restricts Replication of Viruses That Enter Cells via the Plasma Membrane
Cited by: 44
Author(s): Sarah E. Smith, David C. Busse, Špela Binter, Stuart Weston, Carmen Lidia Diaz Soria, Brigitta M. Laksono, Simon Clare, Stefan van Nieuwkoop, Bernadette G. van den Hoogen, Mathew Clement, Morgan Marsden, Ian R. Humphreys, Mark Marsh, Rik L. de Swart, R. Wash, John S. Tregoning, Paul Kellam
Software Mentions: 1
Published: over 5 years ago

10.1007/s13238-019-0641-0

Inhibition of Rac1-dependent forgetting alleviates memory deficits in animal models of Alzheimer’s disease
Cited by: 34
Author(s): Wenjuan Wu, Shuwen Du, Wei Shi, Yunlong Liu, Ying Hu, Zuolei Xie, Xin‐Sheng Yao, Zhenyu Liu, Weiwei Ma, Lin Xu, Chao Ma, Yi Zhong
Software Mentions: 1
Published: over 5 years ago

10.3758/s13423-016-1205-4

Adverse orienting effects on visual working memory encoding and maintenance
Cited by: 6
Author(s): Benchi Wang, Chuyao Yan, Zhiguo Wang, Christian N. L. Olivers, Jan Theeuwes
Software Mentions: 1
Published: almost 8 years ago

10.1098/rsos.150088

MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species
Cited by: 669
Author(s): Masaki Miya, Yukuto Sato, Tsukasa Fukunaga, Tetsuya Sadõ, Jan Yde Poulsen, Keiichi Sato, Toshifumi Minamoto, Satoshi Yamamoto, Hiroki Yamanaka, Hideki Araki, Michio Kondo, Wataru Iwasaki
Software Mentions: 1
Published: over 9 years ago

10.1098/rsos.160299

Adaptive phenotypic response to climate enabled by epigenetics in a K-strategy species, the fish Leucoraja ocellata (Rajidae)
Cited by: 41
Author(s): Jackie Lighten, Danny Incarnato, Ben J. Ward, Cock van Oosterhout, Ian Bradbury, Mark A. Hanson, Paul Bentzen
Software Mentions: 1
Published: about 8 years ago

10.1186/2049-2618-1-3

Stool substitute transplant therapy for the eradication of Clostridium difficile infection: ‘RePOOPulating’ the gut
Cited by: 606
Author(s): Elaine O. Petrof, Gregory B. Gloor, Stephen Vanner, Scott Weese, David Carter, Michelle Daigneault, Eric Brown, Kathleen Schroeter, Emma Allen‐Vercoe
Software Mentions: 1
Published: almost 12 years ago

10.1098/rsos.191642

Individual differences in human voice pitch are preserved from speech to screams, roars and pain cries
Cited by: 20
Author(s): Katarzyna Pisanski, Jordan Raine, David Reby
Software Mentions: 1
Published: almost 5 years ago

10.1523/ENEURO.0235-21.2021

The Impact of SST and PV Interneurons on Nonlinear Synaptic Integration in the Neocortex
Cited by: 2
Author(s): Christopher R. Dorsett, Benjamin D. Philpot, Spencer L. Smith, Ikuko T. Smith
Software Mentions: 1
Published: over 3 years ago

10.1098/rsos.201768

Re-identification of individuals from images using spot constellations: a case study in Arctic charr (Salvelinus alpinus)
Cited by: 2
Author(s): Ignacy T. DeÂ ̧bicki, Elizabeth A. Mittell, Bjarni K. Kristjánsson, Constance LeBlanc, Michael B. Morrissey, Kasim Terzic
Software Mentions: 1
Published: over 3 years ago

10.1186/s40168-016-0179-9

Nasopharyngeal microbiota composition of children is related to the frequency of upper respiratory infection and acute sinusitis
Cited by: 63
Author(s): Clark A. Santee, Nabeetha A. Nagalingam, Ali A. Faruqi, Gregory P. DeMuri, James E. Gern, Ellen R. Wald, Susan V. Lynch
Software Mentions: 1
Published: over 8 years ago

10.1128/MRA.01353-18

Draft Genome Sequence of Picocystis sp. Strain ML, Cultivated from Mono Lake, California
Cited by: 2
Author(s): Emily N. Junkins, Blake W. Stamps, Frank A. Corsetti, Ronald S. Oremland, John R. Spear, Bradley S. Stevenson
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.11349

Nanobodies: site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation
Cited by: 168
Author(s): Tino Pleiner, Mark Bates, S. Trakhanov, Chung-Tien Lee, Jan Erik Schliep, Hema Chug, Marc Böhning, Holger Stark, Henning Urlaub, Dirk Görlich
Software Mentions: 1
Published: almost 9 years ago

10.1523/ENEURO.0222-18.2019

Activation of Distinct Channelrhodopsin Variants Engages Different Patterns of Network Activity
Cited by: 12
Author(s): Na Young Jun, Jessica A. Cardin
Software Mentions: 1
Published: almost 5 years ago

10.1128/MRA.01467-18

Complete Genome Sequence of Microbacterium foliorum NRRL B-24224, a Host for Bacteriophage Discovery
Cited by: 7
Author(s): Daniel A. Russell, Rebecca A. Garlena, Graham F. Hatfull
Software Mentions: 1
Published: almost 6 years ago

10.3390/metabo4020184

Rationales and Approaches for Studying Metabolism in Eukaryotic Microalgae
Cited by: 16
Author(s): Daniel Veyel, Alexander Erban, Ines Fehrle, Joachim Kopka, Michael Schroda
Software Mentions: 1
Published: over 10 years ago

10.3390/medicina56060291

Dropped Head Syndrome Attenuation by Hybrid Assistive Limb: A Preliminary Study of Three Cases on Cervical Alignment during Walking
Cited by: 8
Author(s): Hideki Kadone, Kenji Suzuki, Shigeki Kuzuhara, Tetsuya Abe, Yukiyo Shimizu, Yasushi Hada, Kenji Suzuki, Yoshiyuki Sankai, Yukiyo Shimizu, Masashi Yamazaki
Software Mentions: 1
Published: over 4 years ago

10.1523/ENEURO.0268-18.2018

Independent Neural Activity Patterns for Sensory- and Confidence-Based Information Maintenance during Category-Selective Visual Processing
Cited by: 11
Author(s): Matthew D. Weaver, Johannes J. Fahrenfort, Artem V. Belopolsky, Simon van Gaal
Software Mentions: 1
Published: almost 6 years ago

10.1038/srep09528

Emergence of reconfigurable wires and spinners via dynamic self-assembly
Cited by: 52
Author(s): Gašper Kokot, David Piet, George M. Whitesides, Igor S. Aranson, Alexey Snezhko
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2164-12-67

Genomic sequencing and analysis of a Chinese hamster ovary cell line using Illumina sequencing technology
Cited by: 38
Author(s): Stephanie Hammond, Jeffrey C. Swanberg, Mihailo Kaplarevic, Kelvin H. Lee
Software Mentions: 1
Published: almost 14 years ago

10.1038/srep13811

Comparison of digital PCR platforms and semi-nested qPCR as a tool to determine the size of the HIV reservoir
Cited by: 48
Author(s): Kobus J. Bosman, Monique Nijhuis, Petra M. van Ham, A. M. J. Wensing, Karen Vervisch, Linos Vandekerckhove, Ward De Spiegelaere
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-2164-14-749

Antennal transcriptome profiles of anopheline mosquitoes reveal human host olfactory specialization in Anopheles gambiae
Cited by: 91
Author(s): David C. Rinker, Xiaofan Zhou, R. Jason Pitts, Antonis Rokas, Laurence J. Zwiebel
Software Mentions: 1
Published: about 11 years ago

10.1038/srep17531

Causal Inference and Explaining Away in a Spiking Network
Cited by: 26
Author(s): Rubén Moreno-Bote, Jan Drugowitsch
Software Mentions: 1
Published: almost 9 years ago

10.1186/1471-2164-10-558

High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera
Cited by: 67
Author(s): Erica Mica, Viviana Piccolo, Massimo Delledonne, Alberto Ferrarini, Mario Pezzotti, Cesare Casati, Cristian Del Fabbro, Giorgio Valle, Alberto Policriti, Michèle Morgante, Graziano Pesole, Mario Enrico Pè, David S. Horner
Software Mentions: 1
Published: almost 15 years ago

10.1038/srep19332

A Signaling Lipid Associated with Alzheimer’s Disease Promotes Mitochondrial Dysfunction
Cited by: 25
Author(s): Michael A. Kennedy, Tia C. Moffat, Kenneth Gable, Suriakarthiga Ganesan, Karolina Niewola-Staszkowska, Anne Johnston, Corey Nislow, Guri Giaever, Linda J. Harris, Robbie Loewith, Vanina Zaremberg, Mary‐Ellen Harper, Teresa M. Dunn, Steffany A. L. Bennett, Kristin Baetz
Software Mentions: 1
Published: almost 9 years ago

10.1016/j.medengphy.2017.01.022

Total ankle replacement design and positioning affect implant-bone micromotion and bone strains
Cited by: 51
Author(s): Ran Sopher, Andrew A. Amis, James D. Calder, Jonathan R.T. Jeffers
Software Mentions: 1
Published: over 7 years ago

10.1038/srep20232

Semantic and emotional content of imagined representations in human occipitotemporal cortex
Cited by: 14
Author(s): D. N. Mitchell, Rhodri Cusack
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep21167

Neuroimaging evidence of deficient axon myelination in Wolfram syndrome
Cited by: 29
Author(s): Heather M. Lugar, Jonathan M. Koller, Jerrel Rutlin, Bess A. Marshall, Kohsuke Kanekura, Fumihiko Urano, A. Bischoff, Joshua S. Shimony, Tamara Hershey, Paul E Austin, B. Beato, Emily C. Bihun, Tasha Doty, Gammon M. Earhart, Sarah A. Eisenstein, James Hoekel, Roanne K. Karzon, Amy Licis, Linda Manwaring, Alexander R. Paciorkowski, Y. Pepino de Gruev, Alan Permutt, Kristen A. Pickett, Samantha Ranck, Angela M. Reiersen, Lawrence Tychsen, Amy Robichaux Viehoever, Jon Wasson, Neil H. White
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep22575

A mix-and-read drop-based in vitro two-hybrid method for screening high-affinity peptide binders
Cited by: 13
Author(s): Naiwen Cui, Huidan Zhang, Nils Schneider, Ye Tao, Haruichi Asahara, Zhiyi Sun, Yamei Cai, Stephan A. Koehler, Tom F. A. de Greef, Alireza Abbaspourrad, David A. Weitz, Shaorong Chong
Software Mentions: 1
Published: over 8 years ago

10.1007/s10334-019-00806-7

Comparison of multi-delay FAIR and pCASL labeling approaches for renal perfusion quantification at 3T MRI
Cited by: 16
Author(s): Anita A. Harteveld, A de Boer, Suzanne L. Franklin, Tim Leiner, Marijn van Stralen, Clemens Bos
Software Mentions: 1
Published: almost 5 years ago

10.1523/ENEURO.0158-16.2016

The Role of Visual and Semantic Properties in the Emergence of Category-Specific Patterns of Neural Response in the Human Brain
Cited by: 21
Author(s): David Coggan, Daniel H. Baker, Timothy J. Andrews
Software Mentions: 1
Published: over 8 years ago

10.1038/srep25007

Virtual Raters for Reproducible and Objective Assessments in Radiology
Cited by: 17
Author(s): Jens Kleesiek, Jens Petersen, Markus Döring, Klaus H. Maier‐Hein, Ullrich Köthe, Wolfgang Wick, Fred A. Hamprecht, Martin Bendszus, Armin Biller
Software Mentions: 1
Published: over 8 years ago

10.1186/s12863-018-0670-3

A genome-wide association study for harness racing success in the Norwegian-Swedish coldblooded trotter reveals genes for learning and energy metabolism
Cited by: 15
Author(s): Brandon D. Velie, Kim Jäderkvist Fegraeus, Marina Solé, Maria Rosengren, Knut Røed, Carl-Fredrik Ihler, Eric Strand, Gabriella Lindgren
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.48480

RNA promotes phase separation of glycolysis enzymes into yeast G bodies in hypoxia
Cited by: 67
Author(s): Gregory G. Fuller, Ting Han, Mallory Freeberg, James J. Moresco, Amirhossein Ghanbari Niaki, Nathan Roach, John R. Yates, Sua Myong, John K. Kim
Software Mentions: 1
Published: over 4 years ago

10.1523/ENEURO.0162-17.2017

Developmental Disruption of GABAAR-Meditated Inhibition in Cntnap2 KO Mice
Cited by: 30
Author(s): Morgan S. Bridi, Su Mi Park, Shiyong Huang
Software Mentions: 1
Published: about 7 years ago

10.1002/lno.11374

Seasons of Syn
Cited by: 12
Author(s): Kristen R. Hunter‐Cevera, Michael G. Neubert, Robert J. Olson, Alexi Shalapyonok, Andrew R. Solow, Heidi M. Sosik
Software Mentions: 1
Published: about 5 years ago

10.1007/s00429-019-01859-z

Variability and directionality of inferior olive neuron dendrites revealed by detailed 3D characterization of an extensive morphological library
Cited by: 18
Author(s): Nora Vrieler, Sebastián Loyola, Yasmin Yarden-Rabinowitz, Jesse Hoogendorp, Nikolay Medvedev, Tycho M. Hoogland, Chris I. De Zeeuw, Erik De Schutter, Yosef Yarom, Mario Negrello, Ben Torben-Nielsen, Marylka Yoe Uusisaari
Software Mentions: 1
Published: over 5 years ago

10.1038/srep28893

Neural activity in the medial parietal area V6A while grasping with or without visual feedback
Cited by: 30
Author(s): Rossella Breveglieri, Annalisa Bosco, Claudio Galletti, Lauretta Passarelli, Patrizia Fattori
Software Mentions: 1
Published: over 8 years ago

10.1038/srep29549

The discovery of the Amazonian tree flora with an updated checklist of all known tree taxa
Cited by: 102
Author(s): Hans ter Steege, Rens W. Vaessen, Dairon Cárdenas-López, Daniel Sabatier, Alexandre Antonelli, Sylvia Mota de Oliveira, Nigel C. A. Pitman, Peter M. Jørgensen, Rafael de Paiva Salomão
Software Mentions: 1
Published: over 8 years ago

10.1038/srep33581

Fully Automatic System for Accurate Localisation and Analysis of Cephalometric Landmarks in Lateral Cephalograms
Cited by: 121
Author(s): Claudia Lindner, Ching-Wei Wang, Chung-Ming Huang, Chung Hsing Li, Sheng Wei Chang, Timothy F. Cootes
Software Mentions: 1
Published: about 8 years ago

10.1038/srep35824

Auxotrophy-based High Throughput Screening assay for the identification of Bacillus subtilis stringent response inhibitors
Cited by: 15
Author(s): Liis Andresen, Vallo Varik, Yuzuru Tozawa, Steffi Jimmy, Stina Lindberg, Tanel Tenson, Vasili Hauryliuk
Software Mentions: 1
Published: about 8 years ago

10.1007/s00429-019-01925-6

Loss of serum response factor in mature neurons in the dentate gyrus alters the morphology of dendritic spines and hippocampus-dependent behavioral tasks
Cited by: 8
Author(s): Karolina Nader, Anna Krysiak, Anna Beroun, Martyna Pękała, Magda Szymańska, Bożena Kuźniewska, Kasia Radwańska, Leszek Kaczmarek, Katarzyna Kalita
Software Mentions: 1
Published: over 5 years ago

10.3390/brainsci7050050

A Pilot Study on Brain Plasticity of Functional Connectivity Modulated by Cognitive Training in Mild Alzheimer’s Disease and Mild Cognitive Impairment
Cited by: 35
Author(s): Francesco Barban, Matteo Mancini, Mara Cercignani, Fulvia Adriano, Roberta Perri, Roberta Annicchiarico, Giovanni Augusto Carlesimo, Claudia Ricci, Maria Lombardi, Valeria Teodonno, Laura Serra, Giovanni Giulietti, Lucia Fadda, Alessia Federici, Carlo Caltagirone, Marco Bozzali
Software Mentions: 1
Published: over 7 years ago

10.1038/srep39519

NF-κB signalling and cell fate decisions in response to a short pulse of tumour necrosis factor
Cited by: 42
Author(s): Robin Lee, Mohammad A. Qasaimeh, Xianfang Xia, David Juncker, Suzanne Gaudet
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12876-018-0917-5

The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1
Cited by: 56
Author(s): Floris Imhann, K. Joeri van der Velde, Ruggero Barbieri, Rudi Alberts, Michiel Voskuil, Arnau Vich Vila, Valerie Collij, Lieke M. Spekhorst, Kimberley W. J. van der Sloot, Vera Peters, Hendrik M. van Dullemen, Marijn C. Visschedijk, Eleonora A. M. Festen, Morris A. Swertz, Gerard Dijkstra, Rinse K. Weersma
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2148-13-106

Developing diagnostic SNP panels for the identification of true fruit flies (Diptera: Tephritidae) within the limits of COI-based species delimitation
Cited by: 53
Author(s): Juerg E. Frey, Larissa Guillén, Beatrice Frey, Joerg Samietz, Juan Rull, Martı́n Aluja
Software Mentions: 1
Published: almost 12 years ago

10.1038/srep41528

The hypothalamic NPVF circuit modulates ventral raphe activity during nociception
Cited by: 16
Author(s): Romain Madelaine, Matthew Lovett-Barron, Caroline Halluin, Aaron S. Andalman, Lina Jin, Gemini Skariah, Louis C. Leung, Vanessa M. Burns, Philippe Mourrain
Software Mentions: 1
Published: almost 8 years ago

10.3390/brainsci9070150

Applying a Sensing-Enabled System for Ensuring Safe Anterior Cingulate Deep Brain Stimulation for Pain
Cited by: 16
Author(s): Yongzhi Huang, Binith Cheeran, Alexander L. Green, Timothy Denison, Tipu Z. Aziz
Software Mentions: 1
Published: over 5 years ago

10.1186/s12862-016-0714-0

Anchored enrichment dataset for true flies (order Diptera) reveals insights into the phylogeny of flower flies (family Syrphidae)
Cited by: 81
Author(s): Andrew D. Young, Alan R. Lemmon, Jeffrey H. Skevington, Ximo Mengual, Gunilla Ståhls, Menno Reemer, Kurt Jordaens, Scott Kelso, Emily Moriarty Lemmon, Martin Hauser, M. De Meyer, Bernhard Misof, Brian M. Wiegmann
Software Mentions: 1
Published: over 8 years ago

10.1038/srep44336

Atrial structure, function and arrhythmogenesis in aged and frail mice
Cited by: 53
Author(s): Hailey J. Jansen, Motahareh Moghtadaei, Martin Mackasey, Sara A. Rafferty, Oleg Bogachev, John L. Sapp, Susan E. Howlett, Robert A. Rose
Software Mentions: 1
Published: over 7 years ago

10.1038/srep44903

Influence of the Ag concentration on the medium-range order in a CuZrAlAg bulk metallic glass
Cited by: 23
Author(s): Christoph Gammer, B. Escher, Christian Ebner, Andrew M. Minor, H. P. Karnthaler, J. Eckert, S. Pauly, Christian Rentenberger
Software Mentions: 1
Published: over 7 years ago

10.1038/srep44987

Pupillary responses in non-proliferative diabetic retinopathy
Cited by: 47
Author(s): Jason C Park, Yi Fan Chen, Norman P. Blair, Felix Y. Chau, Jennifer I. Lim, Yannek I. Leiderman, Mahnaz Shahidi, J. Jason McAnany
Software Mentions: 1
Published: over 7 years ago

10.1038/srep45197

Dissecting miRNA gene repression on single cell level with an advanced fluorescent reporter system
Cited by: 15
Author(s): Nicolás Lemus-Diaz, Kai Oliver Böker, Ignacio Rodríguez-Polo, Michael Mitter, Jasmin Preis, Maximilian Arlt, Jens Gruber
Software Mentions: 1
Published: over 7 years ago

10.1038/srep08132

Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO2
Cited by: 246
Author(s): Jian Yu, Michelle Liberton, Paul Cliften, Richard D. Head, Jon Jacobs, Richard Smith, David W. Koppenaal, Jerry J. Brand, Himadri B. Pakrasi
Software Mentions: 1
Published: almost 10 years ago

10.1523/ENEURO.0371-18.2018

The Effects of Methylphenidate (Ritalin) on the Neurophysiology of the Monkey Caudal Prefrontal Cortex
Cited by: 10
Author(s): Sébastien Tremblay, Florian Pieper, Adam Sachs, Ridha Joober, Julio Martínez-Trujillo
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.16394

Direction-dependent arm kinematics reveal optimal integration of gravity cues
Cited by: 61
Author(s): Jérémie Gaveau, Bastien Berret, Dora E. Angelaki, Charalambos Papaxanthis
Software Mentions: 1
Published: about 8 years ago

10.3390/brainsci10060346

Osteopontin and Integrin Mediated Modulation of Post-Synapses in HIV Envelope Glycoprotein Exposed Hippocampal Neurons
Cited by: 3
Author(s): Farina J. Mahmud, Thomas Boucher, Shijun Liang, Amanda Brown
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-017-06522-3

High-Coverage Whole-Exome Sequencing Identifies Candidate Genes for Suicide in Victims with Major Depressive Disorder
Cited by: 52
Author(s): Dóra Tombácz, Zoltán Maróti, Tibor Kalmár, Zsolt Csabai, Zsolt Balázs, Shinichi Takahashi, M. Palkóvits, M Snyder, Zsolt Boldogkői
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-07382-7

Genomic signatures of adaptive introgression from European mouflon into domestic sheep
Cited by: 69
Author(s): Mario Barbato, Frank Hailer, Pablo Orozco‐terWengel, James W. Kijas, Paolo Mereu, Pierangela Cabras, Raffaele Mazza, Μonica Pirastru, Michael William Bruford
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-08934-7

Transcriptomic analysis of nickel exposure in Sphingobium sp. ba1 cells using RNA-seq
Cited by: 10
Author(s): Mariateresa Volpicella, Claudia Leoni, Caterina Manzari, Matteo Chiara, Ernesto Picardi, Elisabetta Piancone, Francesca Italiano, Anna Maria D’Erchia, Massimo Trotta, David S. Horner, Graziano Pesole, Luigi R. Ceci
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-08662-y

Rapid peat accumulation favours the occurrence of both fen and bog microbial communities within a Mediterranean, free-floating peat island
Cited by: 7
Author(s): Giuseppe Concheri, Piergiorgio Stevanato, Claudio Zaccone, William Shotyk, Valeria D’Orazio, Teodoro Miano, Pietro Piffanelli, Valeria Rizzi, Chiara Ferrandi, Andrea Squartini
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-06079-1

Comparative genomics of Australian and international isolates of Salmonella Typhimurium: correlation of core genome evolution with CRISPR and prophage profiles
Cited by: 23
Author(s): Songzhe Fu, Lester Hiley, Sophie Octavia, Mark M. Tanaka, Vitali Sintchenko, Ruiting Lan
Software Mentions: 1
Published: about 7 years ago

10.1093/braincomms/fcaa237

The preterm social brain: altered functional networks for Theory of Mind in very preterm children
Cited by: 11
Author(s): Sarah I. Mossad, Marlee M. Vandewouw, Mary Lou Smith, Margot J. Taylor
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12862-018-1313-z

Small and genetically highly structured populations in a long-legged bee, Rediviva longimanus, as inferred by pooled RAD-seq
Cited by: 11
Author(s): Belinda Kahnt, Panagiotis Theodorou, Antonella Soro, Hilke Hollens-Kuhr, Michael Kuhlmann, Anton Pauw, Robert J. Paxton
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-12038-7

Validating a therapy-oriented complication grading system in lumbar spine surgery: a prospective population-based study
Cited by: 13
Author(s): David Bellut, Jan‐Karl Burkhardt, Dania Schultze, Howard J. Ginsberg, Luca Regli, Johannes Sarnthein
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-12820-7

Periodically spilled-oil input as a trigger to stimulate the development of hydrocarbon-degrading consortia in a beach ecosystem
Cited by: 3
Author(s): Kai Zhang, Yuting Sun, Zhisong Cui, Di Yu, Li Zheng, Peng Liu, Zhenmei Lv
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-14214-1

Association of muscle lipidomic profile with high-fat diet-induced insulin resistance across five mouse strains
Cited by: 22
Author(s): Magdalene K Montgomery, Simon H. J. Brown, Todd W. Mitchell, Adelle C.F. Coster, Gregory J. Cooney, Nigel Turner
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-14382-0

Live Cell Imaging Reveals pH Oscillations in Saccharomyces cerevisiae During Metabolic Transitions
Cited by: 18
Author(s): Benjamin Dodd, Joel M. Kralj
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-14843-6

PDGFR-modulated miR-23b cluster and miR-125a-5p suppress lung tumorigenesis by targeting multiple components of KRAS and NF-kB pathways
Cited by: 48
Author(s): Srivatsava Naidu, Lei Shi, Peter Magee, Justin Middleton, Alessandro Laganà, Sudhakar Sahoo, Hui Sun Leong, Melanie Galvin, Kristopher K. Frese, Caroline Dive, Vincenza Guzzardo, Matteo Fassan, Michela Garofalo
Software Mentions: 1
Published: about 7 years ago

10.1002/brb3.2135

Sleep deprivation alters task‐related changes in functional connectivity of the frontal cortex: A near‐infrared spectroscopy study
Cited by: 7
Author(s): Péter Mukli, Tamás Csípő, Ágnes Lipécz, Orestis Stylianou, Frigyes Samuel Racz, Cameron D. Owens, Jonathan W. Perry, Stefano Tarantini, Farzaneh A. Sorond, J. Mikhail Kellawan, György Purebl, Yuan Yang, William E. Sonntag, Anna Csiszár, Zoltán Ungvári, Andriy Yabluchanskiy
Software Mentions: 1
Published: over 3 years ago

10.1002/brb3.2324

Finger tapping to different styles of music and changes in cortical oscillations
Cited by: 3
Author(s): Elizabeth L. Stegemöller, Thomas D. Ferguson, Andrew Zaman, Paul R. Hibbing, Patricia Izbicki, Olave E. Krigolson
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-017-18153-9

Electrical stimulation of macaque lateral prefrontal cortex modulates oculomotor behavior indicative of a disruption of top-down attention
Cited by: 13
Author(s): Philipp Schwedhelm, Daniel Baldauf, Stefan Treue
Software Mentions: 1
Published: almost 7 years ago

10.1093/brain/awx014

PRUNE is crucial for normal brain development and mutated in microcephaly with neurodevelopmental impairment
Cited by: 58
Author(s): Massimo Zollo, Mustafa Y Ahmed, Veronica Ferrucci, Vincenzo Salpietro, Fatemeh Asadzadeh, Marianeve Carotenuto, Reza Maroofian, Ahmed Al-Amri, Royana Singh, Iolanda Scognamiglio, Majid Mojarrad, Luca Musella, Angela Duilio, Angela Di Somma, Ender Karaca, Anna Rajab, Aisha Al-Khayat, Tribhuban Mohan Mohapatra, Atieh Eslahi, Farah Ashrafzadeh, Lettie E Rawlins, Rajniti Prasad, Rashmi Gupta, Preeti Kumari, Mona Srivastava, Flora Cozzolino, Sunil Kumar, Maria Monti, Gaurav V. Harlalka, Michael A. Simpson, Philip Rich, Fatema Al-Salmi, Michael A. Patton, Barry A. Chioza, Stéphanie Efthymiou, Francesca Granata, Gabriella Di Rosa, Sarah Wiethoff, Eugenia Borgione, Carmela Scuderi, Kshitij Mankad, Michael G. Hanna, Piero Pucci, Henry Houlden, James R. Lupski, Andrew H. Crosby, Emma L. Baple
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-18905-7

Synaptic localisation of SRF coactivators, MKL1 and MKL2, and their role in dendritic spine morphology
Cited by: 14
Author(s): Marisa Kaneda, Hiroyuki Sakagami, Yamato Hida, Toshihisa Ohtsuka, Natsumi Satou, Yuta Ishibashi, Mamoru Fukuchi, Anna Krysiak, Mitsuru Ishikawa, Daisuke Ihara, Katarzyna Kalita, Akiko Tabuchi
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-20662-0

Superficial Slow Rhythms Integrate Cortical Processing in Humans
Cited by: 54
Author(s): Milan Halgren, Dániel Fabó, István Ulbert, Joseph R. Madsen, Lóránd Erőss, Werner Doyle, Orrin Devinsky, Donald L. Schomer, Sydney S. Cash, Eric Halgren
Software Mentions: 1
Published: almost 7 years ago

10.1523/ENEURO.0081-18.2018

Functional Connectivity of Chronic Cocaine Use Reveals Progressive Neuroadaptations in Neocortical, Striatal, and Limbic Networks
Cited by: 36
Author(s): Caitlin A. Orsini, Luis M. Colon-Perez, Sara C. Heshmati, Barry Setlow, Marcelo Febo
Software Mentions: 1
Published: over 6 years ago

10.1016/j.bone.2014.01.003

Increasing shape modelling accuracy by adjusting for subject positioning: An application to the analysis of radiographic proximal femur symmetry using data from the Osteoarthritis Initiative
Cited by: 8
Author(s): Claudia Lindner, Gillian A. Wallis, Timothy F. Cootes
Software Mentions: 1
Published: over 10 years ago

10.1186/s12885-018-4350-5

The oncogenic effects of HES1 on salivary adenoid cystic carcinoma cell growth and metastasis
Cited by: 12
Author(s): Xiaoyu Huang, Rui‐Huan Gan, Jian Xie, Lin Shen, Yong Zhao, Lin‐Can Ding, Bogong Su, Dali Zheng, Youguang Lu
Software Mentions: 1
Published: over 6 years ago

10.1186/s12938-017-0346-7

Global Kalman filter approaches to estimate absolute angles of lower limb segments
Cited by: 11
Author(s): Samuel L. Nogueira, Stefan Lambrecht, Roberto S. Inoue, Magdo Bôrtole, Arlindo Neto Montagnoli, Juan C. Moreno, Eduardo Rocón, Marco H. Terra, Adriano A. G. Siqueira, José L. Pons
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-25093-5

Effects of meaningfulness on perception: Alpha-band oscillations carry perceptual expectations and influence early visual responses
Cited by: 38
Author(s): Jason Samaha, Bastien Boutonnet, Bradley R. Postle, Gary Lupyan
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-25532-3

Anomalous Scaling of Gene Expression in Confined Cell-Free Reactions
Cited by: 26
Author(s): Ryota Sakamoto, Vincent Noireaux, Yusuke Maeda
Software Mentions: 1
Published: over 6 years ago

Projects: pypi: custom

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