Projects: pypi: cogent
https://packages.ecosyste.ms/registries/pypi.org/packages/cogent
COmparative GENomics Toolkit
12 versions
Latest release: almost 2 years ago
217 downloads last month
Enhanced Analysis
Educational Contributors:
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Repository Activity:
Repository Owner:
pycogent (organization)
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+240
Educational commit emails
12 contributors with educational email addresses
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem
Very Likely Science (100)
Papers Mentioning cogent 7
10.3390/ijms21218148
Utilizing PacBio Iso-Seq for Novel Transcript and Gene Discovery of Abiotic Stress Responses in Oryza sativa L.Cited by: 25
Author(s): Stephanie Schaarschmidt, Axel Fischer, Lovely Mae F Lawas, Rejbana Alam, Endang M. Septiningsih, Julia Bailey‐Serres, Krishna Jagadish, Bruno Huettel, Dirk K. Hincha, Ellen Zuther
Software Mentions: 11
Published: over 4 years ago
10.3390/ijms21031067
Full-Length Transcriptome Assembly of Italian Ryegrass Root Integrated with RNA-Seq to Identify Genes in Response to Plant Cadmium StressCited by: 32
Author(s): Zhaoyang Hu, Yufei Zhang, Yue Ping He, Qingqing Cao, Ting Zhang, Laiqing Lou, Qingqing Cai
Software Mentions: 5
Published: over 5 years ago
10.1186/s12864-020-6524-1
Transcriptome sequencing and whole genome expression profiling of hexaploid sweetpotato under salt stressCited by: 17
Author(s): Mohamed Hamed Arisha, Hesham Aboelnasr, Muhammad Qadir Ahmad, Yaju Liu, Wei Tang, Runfei Gao, Hui Yan, Meng Kou, Xin Wang, Yungang Zhang, Qiang Li
Software Mentions: 4
Published: over 5 years ago
10.1186/1471-2180-13-252
Disturbance induced decoupling between host genetics and composition of the associated microbiomeCited by: 104
Author(s): K. Mathias Wegner, Nils Volkenborn, Hannes Peter, Alexander Eiler
Software Mentions: 2
Published: over 12 years ago
10.1111/ejn.12371
Parallelism in the brain's visual form systemCited by: 20
Author(s): Yoshihito Shigihara, Semir Zeki
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0116126
You Turn Me Cold: Evidence for Temperature ContagionCited by: 16
Author(s): E. Cooper, J. P. Garlick, Eric Featherstone, Valerie Voon, Tania Singer, Hugo Critchley, Neil A. Harrison
Software Mentions: 1
Published: over 10 years ago
10.3390/genes12060869
SMRT and Illumina RNA Sequencing and Characterization of a Key NAC Gene LoNAC29 during the Flower Senescence in Lilium oriental ‘Siberia’Cited by: 4
Author(s): Luo Jia, Ruirui Li, Xintong Xu, Hairui Niu, Yujie Zhang, Caiyun Wang
Software Mentions: 1
Published: about 4 years ago