Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: cogent

https://packages.ecosyste.ms/registries/pypi.org/packages/cogent

COmparative GENomics Toolkit
12 versions
Latest release: about 1 year ago
217 downloads last month

Papers Mentioning cogent 7

Utilizing PacBio Iso-Seq for Novel Transcript and Gene Discovery of Abiotic Stress Responses in Oryza sativa L.
Cited by: 25
Author(s): Stephanie Schaarschmidt, Axel Fischer, Lovely Mae F Lawas, Rejbana Alam, Endang M. Septiningsih, Julia Bailey‐Serres, Krishna Jagadish, Bruno Huettel, Dirk K. Hincha, Ellen Zuther
Software Mentions: 11
Published: about 4 years ago

10.3390/ijms21031067

Full-Length Transcriptome Assembly of Italian Ryegrass Root Integrated with RNA-Seq to Identify Genes in Response to Plant Cadmium Stress
Cited by: 32
Author(s): Zhaoyang Hu, Yufei Zhang, Yue Ping He, Qingqing Cao, Ting Zhang, Laiqing Lou, Qingqing Cai
Software Mentions: 5
Published: almost 5 years ago

10.1186/s12864-020-6524-1

Transcriptome sequencing and whole genome expression profiling of hexaploid sweetpotato under salt stress
Cited by: 17
Author(s): Mohamed Hamed Arisha, Hesham Aboelnasr, Muhammad Qadir Ahmad, Yaju Liu, Wei Tang, Runfei Gao, Hui Yan, Meng Kou, Xin Wang, Yungang Zhang, Qiang Li
Software Mentions: 4
Published: over 4 years ago

10.1186/1471-2180-13-252

Disturbance induced decoupling between host genetics and composition of the associated microbiome
Cited by: 104
Author(s): K. Mathias Wegner, Nils Volkenborn, Hannes Peter, Alexander Eiler
Software Mentions: 2
Published: almost 12 years ago

10.1111/ejn.12371

Parallelism in the brain's visual form system
Cited by: 20
Author(s): Yoshihito Shigihara, Semir Zeki
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0116126

You Turn Me Cold: Evidence for Temperature Contagion
Cited by: 16
Author(s): E. Cooper, J. P. Garlick, Eric Featherstone, Valerie Voon, Tania Singer, Hugo Critchley, Neil A. Harrison
Software Mentions: 1
Published: almost 10 years ago

10.3390/genes12060869

SMRT and Illumina RNA Sequencing and Characterization of a Key NAC Gene LoNAC29 during the Flower Senescence in Lilium oriental ‘Siberia’
Cited by: 4
Author(s): Luo Jia, Ruirui Li, Xintong Xu, Hairui Niu, Yujie Zhang, Caiyun Wang
Software Mentions: 1
Published: over 3 years ago