Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: clasp

https://packages.ecosyste.ms/registries/pypi.org/packages/clasp

clasp is tools for command line and subprocess script development
38 versions
Latest release: over 1 year ago
2 dependent packages
94 downloads last month

Papers Mentioning clasp 8

Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks
Cited by: 68
Author(s): Sylvain Prigent, Clémence Frioux, Simon M. Dittami, Sven Thiele, Abdelhalim Larhlimi, Guillaume Collet, Fabien Gutknecht, Jeanne Got, Damien Eveillard, Jérémie Bourdon, Frédéric Plewniak, Thierry Tonon, Anne Siegel
Software Mentions: 3
Published: over 7 years ago

10.1186/s12859-015-0733-7

Extended notions of sign consistency to relate experimental data to signaling and regulatory network topologies
Cited by: 13
Author(s): Sven Thiele, Luca Cerone, Julio Sáez-Rodríguez, Anne Siegel, Carito Guziołowski, Steffen Klamt
Software Mentions: 3
Published: almost 9 years ago

10.1016/j.artint.2014.11.008

Methods for solving reasoning problems in abstract argumentation – A survey
Cited by: 111
Author(s): Günther Charwat, Wolfgang Dvořák, Sarah Alice Gaggl, Johannes Wallner, Stefan Woltran
Software Mentions: 2
Published: over 9 years ago

10.1186/1748-7188-6-4

Fast local fragment chaining using sum-of-pair gap costs
Cited by: 14
Author(s): Christian Otto, Steve Hoffmann, Jan Gorodkin, Peter F. Stadler
Software Mentions: 2
Published: over 13 years ago

10.3389/fbioe.2014.00081

Learning Delayed Influences of Biological Systems
Cited by: 11
Author(s): Tony Ribeiro, Morgan Magnin, Katsumi Inoue, Chiaki Sakama
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2105-9-228

Inferring the role of transcription factors in regulatory networks
Cited by: 13
Author(s): Philippe Veber, Carito Guziołowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel
Software Mentions: 1
Published: over 16 years ago

10.7717/peerj.3860

Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks
Cited by: 9
Author(s): Julie Laniau, Clémence Frioux, Jacques Nicolas, Caroline Baroukh, María Paz Cortés, Jeanne Got, Camille Trottier, Damien Eveillard, Anne Siegel
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0050881

Using Answer Set Programming to Integrate RNA Expression with Signalling Pathway Information to Infer How Mutations Affect Ageing
Cited by: 14
Author(s): Irene Papatheodorou, Matthias Ziehm, Daniela Wieser, Nazif Alic, Linda Partridge, Janet M. Thornton
Software Mentions: 1
Published: almost 12 years ago