pypi: bowtie | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0087744

The Atlantic Bonito (Sarda sarda, Bloch 1793) Transcriptome and Detection of Differential Expression during Larvae Development
Cited by: 14
Author(s): Elena Sarropoulou, Hooman K. Moghadam, Nikos Papandroulakis, Fernando de la Gándara, Aurelio Ortega García, Pavlos Makridis
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0136798

Allele-Selective Transcriptome Recruitment to Polysomes Primed for Translation: Protein-Coding and Noncoding RNAs, and RNA Isoforms
Cited by: 13
Author(s): Roshan Mascarenhas, Maciej Pietrzak, Ryan M. Smith, Amy Webb, Daqing Wang, Audrey C. Papp, Julia K. Pinsonneault, Michał Seweryn, Grzegorz A. Rempała, Wolfgang Sadée
Software Mentions: 1
Published: about 11 years ago

10.3390/ijms18040723

Dysregulated IER3 Expression is Associated with Enhanced Apoptosis in Titin-Based Dilated Cardiomyopathy
Cited by: 10
Author(s): Qifeng Zhou, Johannes-Martin Hahn, Balram Neupane, Parwez Aidery, Siegfried Labeit, Meinrad Gawaz, Michael Gramlich
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0129190

p53 Represses the Oncogenic Sno-MiR-28 Derived from a SnoRNA
Cited by: 52
Author(s): Yu Feng, Cameron P. Bracken, Katherine A. Pillman, David Lawrence, Gregory J. Goodall, David F. Callen, Paul M. Neilsen
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0012984

Weakly Positioned Nucleosomes Enhance the Transcriptional Competency of Chromatin
Cited by: 8
Author(s): Yaakov Belch, Jingyi Yang, Yang Liu, Sridhar A. Malkaram, Rong Liu, Jean-Jack M. Riethoven, István Ladunga
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0122170

De Novo Characterization of Fall Dormant and Nondormant Alfalfa (Medicago sativa L.) Leaf Transcriptome and Identification of Candidate Genes Related to Fall Dormancy
Cited by: 34
Author(s): Senhao Zhang, Shi Ya, Ningning Cheng, Hao Du, Wenna Fan, Chengzhang Wang
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0044017

Allele-Biased Expression in Differentiating Human Neurons: Implications for Neuropsychiatric Disorders
Cited by: 64
Author(s): Mingyan Lin, Anastasia Hrabovsky, Erika Pedrosa, Tao Wang, Deyou Zheng, Herbert M. Lachman
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0069168

De novo Assembly and Characterization of the Barnyardgrass (Echinochloa crus-galli) Transcriptome Using Next-Generation Pyrosequencing
Cited by: 55
Author(s): Xiaoyan Yang, Xinyan Yu, Yongfeng Li
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0151826

A Bayesian Assignment Method for Ambiguous Bisulfite Short Reads
Cited by: 1
Author(s): Hong T. Tran, Xiaowei Wu, Saima Sultana Tithi, Miao‐Kun Sun, Hehuang Xie, Liqing Zhang
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0024883

A Comprehensive Expression Profile of MicroRNAs in Porcine Pituitary
Cited by: 22
Author(s): Hongyi Li, Qianyun Xi, Yuanyan Xiong, Xiao Cheng, Qien Qi, Lin Yang, Gang Shu, Lina Wang, Ping Gao, Xiaotong Zhu, Qingyan Jiang, Yongliang Zhang, Yuan Li
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0150344

Genome-Wide Search for Host Association Factors during Ovine Progressive Pneumonia Virus Infection
Cited by: 7
Author(s): Jay Thompson, Fangrui Ma, Meghan Quinn, Shi-Hua Xiang
Software Mentions: 1
Published: over 10 years ago

10.1038/srep22687

High throughput sequencing of small RNAs transcriptomes in two Crassostrea oysters identifies microRNAs involved in osmotic stress response
Cited by: 39
Author(s): Xuelin Zhao, Hong Yu, Lingfeng Kong, Shikai Liu, Qi Li
Software Mentions: 1
Published: over 10 years ago

10.1038/srep28637

DDX3 Represses Stemness by Epigenetically Modulating Tumor-suppressive miRNAs in Hepatocellular Carcinoma
Cited by: 27
Author(s): Hao Kang Li, Ru-Tsun Mai, Hsien Da Huang, Chih‐Hung Chou, Yi-Chun Chang, Yao-Wen Chang, Li Ru You, Chun Ming Chen, Yan-Hwa Wu Lee
Software Mentions: 1
Published: over 10 years ago

10.1038/srep32479

Effects of early feeding on the host rumen transcriptome and bacterial diversity in lambs
Cited by: 74
Author(s): Weimin Wang, Chong Li, Fadi Li, Xiaojuan Wang, Xiaoxue Zhang, Ting Liu, Fang Nian, Xiangpeng Yue, Fĕi Li, Xiangyu Pan, Yongfu La, Futao Mo, Fangbin Wang, Baosheng Li
Software Mentions: 1
Published: about 10 years ago

10.1038/srep33510

Global analysis of transcription in castration-resistant prostate cancer cells uncovers active enhancers and direct androgen receptor targets
Cited by: 30
Author(s): Sari Toropainen, Einari A. Niskanen, Marjo Malinen, Päivi Sutinen, Minna U. Kaikkonen, Jorma J. Palvimo
Software Mentions: 1
Published: about 10 years ago

10.1038/srep35873

Comparative venomics of Psyttalia lounsburyi and P. concolor, two olive fruit fly parasitoids: a hypothetical role for a GH1 β-glucosidase
Cited by: 25
Author(s): Hugo Mathé-Hubert, Dominique Colinet, Emeline Deleury, Maya Belghazi, Marc Ravallec, Julie Poulain, Carole Dossat, Marylène Poirié, Jean‐Luc Gatti
Software Mentions: 1
Published: about 10 years ago

10.1038/srep38228

MicroRNAs modulate adaption to multiple abiotic stresses in Chlamydomonas reinhardtii
Cited by: 22
Author(s): Xiang Gao, Fengge Zhang, Jinlu Hu, Wenkai Cai, Shengfang Ge, Dongsheng Dai, Kaiyao Huang, Gaohong Wang
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijms20071754

The miRNA-Mediated Post-Transcriptional Regulation of Maize in Response to High Temperature
Cited by: 35
Author(s): Moubiao Zhang, Panpan An, Hongping Li, Xiuling Wang, Jinlong Zhou, Pengfei Dong, Yali Zhao, Qun Wang, LI Chao-hai
Software Mentions: 1
Published: over 7 years ago

10.1038/srep21602

Smad2 and Smad3 have differential sensitivity in relaying TGFβ signaling and inversely regulate early lineage specification
Cited by: 71
Author(s): Ling Liu, Xu Liu, Xudong Ren, Yuan Tian, Zhenyu Chen, Xiangjie Xu, Yanhua Du, Cizhong Jiang, Yujiang Fang, Zhongliang Liu, Beibei Fan, Quanbin Zhang, Guohua Jin, Xiao Yang, Xiaoqing Zhang
Software Mentions: 1
Published: over 10 years ago

10.1038/sdata.2019.13

MicroRNA expression profiles across blood and different tissues in cattle
Cited by: 26
Author(s): Hui-Zeng Sun, Yanhong Chen, Le Luo Guan
Software Mentions: 1
Published: over 7 years ago

10.1038/srep39742

Identification of small RNAs in extracellular vesicles from the commensal yeast Malassezia sympodialis
Cited by: 65
Author(s): Simon Rayner, Sören Bruhn, Helen Vallhov, Ann‐Catrin Andersson, R. Blake Billmyre, Annika Scheynius
Software Mentions: 1
Published: almost 10 years ago

10.1038/srep40503

Genome-wide DNA methylation profile in mungbean
Cited by: 10
Author(s): Yang Jae Kang, Ahra Bae, Sangrea Shim, Taeyoung Lee, Jayern Lee, Dani Satyawan, Moon Young Kim, Suk-Ha Lee
Software Mentions: 1
Published: almost 10 years ago

10.1038/srep40713

Global identification of microRNAs associated with chlorantraniliprole resistance in diamondback moth Plutella xylostella (L.)
Cited by: 26
Author(s): Bin Zhu, Xiuxia Li, Ying Liu, Xiwu Gao, Pei Liang
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12284-019-0287-9

Comparative study of the mycorrhizal root transcriptomes of wild and cultivated rice in response to the pathogen Magnaporthe oryzae
Cited by: 28
Author(s): Lei Tian, Chunguang Chang, Lina Ma, Fahad Nasir, Jianfeng Zhang, Weiqiang Li, Lam-Son Phan Tran, Chunjie Tian
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0171566

Comparison of whole genome amplification techniques for human single cell exome sequencing
Cited by: 59
Author(s): Erik Borgström, Marta Paterlini, Jeff E. Mold, Jonas Frisén, Joakim Lundeberg
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2014.00108

The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments
Cited by: 63
Author(s): Nicole M. Scott, Matthias Hess, N. Bouskill, Olivia U. Mason, Janet Jansson, Jack A. Gilbert
Software Mentions: 1
Published: over 12 years ago

10.3389/fmicb.2016.01905

RNAseq Analysis of Endornavirus-Infected vs. Endornavirus-Free Common Bean (Phaseolus vulgaris) Cultivar Black Turtle Soup
Cited by: 11
Author(s): Surasak Khankhum, Noa Sela, Juan M. Osorno, R. A. Valverde
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2020.01739

Genomic Characteristics and Potential Metabolic Adaptations of Hadal Trench Roseobacter and Alteromonas Bacteria Based on Single-Cell Genomics Analyses
Cited by: 6
Author(s): Mingming Chen, Yu Song, Xiaoyuan Feng, Kai Tang, Nianzhi Jiao, Jie Tian, Yao Zhang
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.01873

The Use of Transposon Insertion Sequencing to Interrogate the Core Functional Genome of the Legume Symbiont Rhizobium leguminosarum
Cited by: 28
Author(s): Benjamin J. Perry, Mir S. Akter, Christopher K. Yost
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2017.00501

Human and Epstein-Barr Virus miRNA Profiling as Predictive Biomarkers for Endemic Burkitt Lymphoma
Cited by: 16
Author(s): Cliff I. Oduor, Mercedeh Movassagh, Yasin Kaymaz, Kiprotich Chelimo, Juliana A. Otieno, John Michael Ong’echa, Ann M. Moormann, Jeffrey A. Bailey
Software Mentions: 1
Published: over 9 years ago

10.1038/srep04853

Characterization of limes (Citrus aurantifolia) grown in Bhutan and Indonesia using high-throughput sequencing
Cited by: 22
Author(s): Tshering Penjor, Takashi Mimura, Ryoji Matsumoto, Masashi Yamamoto, Yukio Nagano
Software Mentions: 1
Published: over 12 years ago

10.1038/srep45490

Thiourea priming enhances salt tolerance through co-ordinated regulation of microRNAs and hormones in Brassica juncea
Cited by: 34
Author(s): Ashish Kumar Srivastava, Gaurav Sablok, Michael Hackenberg, Uday Deshpande, Penna Suprasanna
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms20164058

Comparative Analysis of miRNA Abundance Revealed the Function of Vvi-miR828 in Fruit Coloring in Root Restriction Cultivation Grapevine (Vitis vinifera L.)
Cited by: 16
Author(s): Qiuju Chen, Bohan Deng, Jie Gao, Zhongyang Zhao, Zili Chen, Shiren Song, Lei Wang, Liping Zhao, Wenping Xu, Caixi Zhang, Shiping Wang, Chao Ma
Software Mentions: 1
Published: about 7 years ago

10.18632/oncotarget.15517

Identification and characterization of L1-specific endo-siRNAs essential for early embryonic development in pig
Cited by: 10
Author(s): Heng Zhang, Ji‐Long Liu, Yurong Tai, Xiaolei Zhang, Jiaming Zhang, Shichao Liu, Jiawei Lv, Qingran Kong
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0110808

Diverse and Widespread Contamination Evident in the Unmapped Depths of High Throughput Sequencing Data
Cited by: 166
Author(s): Richard W. Lusk
Software Mentions: 1
Published: about 12 years ago

10.1038/srep46578

Influenza C in Lancaster, UK, in the winter of 2014–2015
Cited by: 10
Author(s): Kate V. Atkinson, L.A. Bishop, Glenn Rhodes, Nicolas Salez, Neil R. McEwan, Matthew J. Hegarty, Julie Robey, Nicola Harding, Simon Wetherell, Robert M. Lauder, Roger W. Pickup, Mark Wilkinson, Derek Gatherer
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0049700

Human Induced Pluripotent Stem Cell-Derived Models to Investigate Human Cytomegalovirus Infection in Neural Cells
Cited by: 60
Author(s): Leonardo D’Aiuto, Roberto Di Maio, Brianna Heath, Giorgio Raimondi, Jadranka Milošević, Annie Watson, Mikhil Bamne, W. Tony Parks, Lei Yang, Bo Lin, Toshio Miki, Jocelyn Danielle Mich-Basso, Ravit Arav‐Boger, Etienne Sibille, Sarven Sabunciyan, Robert H. Yolken, Vishwajit L. Nimgaonkar
Software Mentions: 1
Published: almost 14 years ago

10.3389/fimmu.2017.02010

Benzyl-2-Acetamido-2-Deoxy-α-d-Galactopyranoside Increases Human Immunodeficiency Virus Replication and Viral Outgrowth Efficacy In Vitro
Cited by: 5
Author(s): Àlex Olvera, Javier P Martínez, María Casadellà, Anuska Llano, Míriam Rosás, Beatriz Mothe, Marta Ruiz-Riol, Gemma Arsequell, Gregorio Valencia, Marc Noguera‐Julian, Roger Paredes, Andreas Meyerhans, Christian Berthou
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0095091

Identification of Stim1 as a Candidate Gene for Exaggerated Sympathetic Response to Stress in the Stroke-Prone Spontaneously Hypertensive Rat
Cited by: 16
Author(s): Mohammed Z. Ferdaus, Bing Xiao, Hirotaka Ohara, Kiyomitsu Nemoto, Yuji Harada, Kathrin Saar, Norbert Hübner, Minoru Isomura, Toru Nabika
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0154939

Increased Expression of SETD7 Promotes Cell Proliferation by Regulating Cell Cycle and Indicates Poor Prognosis in Hepatocellular Carcinoma
Cited by: 31
Author(s): Yuanyuan Chen, Shengsheng Yang, Jiewei Hu, Chaoqin Yu, Miaoxia He, Cai Zhang
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-017-02752-7

Chronic low-dose exposure to a mixture of environmental endocrine disruptors induces microRNAs/isomiRs deregulation in mouse concomitant with intratesticular estradiol reduction
Cited by: 27
Author(s): Julio Buñay, Eduardo Larriba, Ricardo D. Moreno, Jesús del Mazo
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-06255-3

Dynamic transcriptomic analysis of the early response of female flowers of Populus alba × P. glandulosa to pollination
Cited by: 4
Author(s): Pian Rao, Zhong Chen, Xiaoyu Yang, Kai Gao, Xiong Yang, Tianyun Zhao, Siyan Li, Bo Wu, Xinmin An
Software Mentions: 1
Published: over 9 years ago

10.3389/fgene.2019.00222

Novel and Conserved miRNAs Among Brazilian Pine and Other Gymnosperms
Cited by: 13
Author(s): José Henrique Galdino, María Eguiluz, Frank Guzmán, Rogério Margis
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms21041228

A Post-Processing Algorithm for miRNA Microarray Data
Cited by: 15
Author(s): Stepan Nersisyan, M. Yu. Shkurnikov, А. А. Полозников, Andrey Turchinovich, Barbara Burwinkel, Никита Анисимов, Alexander G. Tonevitsky
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms21072309

The Encystment-Related MicroRNAs and Its Regulation Molecular Mechanism in Pseudourostyla cristata Revealed by High Throughput Small RNA Sequencing
Cited by: 3
Author(s): Nan Pan, Muhammad Zeeshan Bhatti, Haiyang Zhang, Bing Ni, Xinpeng Fan, Jiwu Chen
Software Mentions: 1
Published: over 6 years ago

10.3389/fgene.2021.675027

Rapid Evolution of Autosomal Binding Sites of the Dosage Compensation Complex in Drosophila melanogaster and Its Association With Transcription Divergence
Cited by: 1
Author(s): Aimei Dai, Yushuai Wang, Anthony J. Greenberg, Zhongqi Liufu, Tian Tang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-017-11752-6

Generation of a new mouse model of glaucoma characterized by reduced expression of the AP-2β and AP-2δ proteins
Cited by: 7
Author(s): Maria Monica Barzago, Mami Kurosaki, Maddalena Fratelli, Marco Bolis, Chiara Giudice, Laura Nordio, Elisa Cerri, Luciano Domenici, Mineko Terao, Enrico Garattini
Software Mentions: 1
Published: about 9 years ago

10.3389/fgene.2012.00226

Lack of miRNA Misregulation at Early Pathological Stages in Drosophila Neurodegenerative Disease Models
Cited by: 20
Author(s): Anita Reinhardt, Sébastien Feuillette, Marlène Cassar, Céline Callens, Hélène Thomassin, Serge Birman, Magalie Lecourtois, Christophe Antoniewski, Hervé Tricoire
Software Mentions: 1
Published: almost 15 years ago

10.1038/s41598-017-14676-3

Comprehensive single-cell transcriptome analysis reveals heterogeneity in endometrioid adenocarcinoma tissues
Cited by: 20
Author(s): Shinichi Hashimoto, Yuta Tabuchi, Hideaki Yurino, Yoshihiko Hirohashi, Shungo Deshimaru, Takuya Asano, Tasuku Mariya, Kenshiro Oshima, Yuzuru Takamura, Yoshiaki Ukita, Akio Ametani, Naoto Kondo, Norikazu Monma, Tomomi Takeda, Sadahiko Misu, Toshitugu Okayama, Kazuho Ikeo, Tsuyoshi Saito, Shuya Kaneko, Yutaka Suzuki, Masahira Hattori, Kouji Matsushima, Toshihiko Torigoe
Software Mentions: 1
Published: about 9 years ago

10.3389/fgene.2013.00150

The detection of microRNA associated with Alzheimer's disease in biological fluids using next-generation sequencing technologies
Cited by: 104
Author(s): Lesley Cheng, Camelia Quek, Xin Sun, Shayne A. Bellingham, Andrew F. Hill
Software Mentions: 1
Published: almost 14 years ago

10.3389/fgene.2020.00947

MicroRNA Expression Profiling of Bone Marrow–Derived Proangiogenic Cells (PACs) in a Mouse Model of Hindlimb Ischemia: Modulation by Classical Cardiovascular Risk Factors
Cited by: 3
Author(s): Michel Desjarlais, Sylvie Dussault, José Carlos Rivera, Sylvain Chemtob, Alain Rivard
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-017-16546-4

STRT-seq-2i: dual-index 5ʹ single cell and nucleus RNA-seq on an addressable microwell array
Cited by: 73
Author(s): Hannah Hochgerner, Peter Lönnerberg, Rebecca D. Hodge, Jaromír Mikes, Abeer Heskol, Hermann Hubschle, Philip Lin, Simone Picelli, Gioele La Manno, Michael Ratz, Jude Dunne, Syed Akhtar Husain, Ed Lein, Maithreyan Srinivasan, Amit Zeisel, Sten Linnarsson
Software Mentions: 1
Published: almost 9 years ago

10.3389/fendo.2019.00485

Growth Hormone Promotes in vitro Maturation of Human Oocytes
Cited by: 29
Author(s): Yue Li, Hui Liu, Qingqing Yu, Hongbin Liu, Tao Huang, Shigang Zhao, Jinlong Ma, Han Zhao
Software Mentions: 1
Published: over 7 years ago

10.3389/fcell.2021.679325

Meis2 Is Required for Inner Ear Formation and Proper Morphogenesis of the Cochlea
Cited by: 6
Author(s): María Beatriz Durán Alonso, Victor Vendrell, Iris López‐Hernández, Donna M. Martin, Fernando Giráldez, Laura Carramolino, Giovanna Giovinazzo, Enrique Vázquez, Miguel Torres, Thomas Schimmang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-017-17852-7

Inferring evolutionary responses of Anolis carolinensis introduced into the Ogasawara archipelago using whole genome sequence data
Cited by: 6
Author(s): Satoshi Tamate, Watal M. Iwasaki, Kenneth L. Krysko, Brian J. Camposano, Hideaki Mori, Ryo Funayama, Keiko Nakayama, Takashi Makino, Masakado Kawata
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-18672-5

Respiratory Syncytial Virus Infection Changes Cargo Composition of Exosome Released from Airway Epithelial Cells
Cited by: 82
Author(s): Harendra Singh Chahar, Tiziana Corsello, Andrzej Kudlicki, Narayana Komaravelli, Antonella Casola
Software Mentions: 1
Published: almost 9 years ago

10.3389/fcell.2021.670435

PERK Signaling Controls Myoblast Differentiation by Regulating MicroRNA Networks
Cited by: 9
Author(s): Ying Tan, Yin Zhang, Bin Li, Yangwen Ou, Shu‐Juan Xie, Peipei Chen, Shi-Qiang Mei, Qiao-Juan Huang, Ling‐Ling Zheng, Liang‐Hu Qu
Software Mentions: 1
Published: over 5 years ago

10.3389/fbioe.2015.00007

Computational Prediction of miRNA Genes from Small RNA Sequencing Data
Cited by: 33
Author(s): Wenjing Kang, Marc R. Friedländer
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-018-21268-2

Comparative transcriptomics provides novel insights into the mechanisms of selenium tolerance in the hyperaccumulator plant Cardamine hupingshanensis
Cited by: 37
Author(s): Yang Zhou, Tang Qiao-yu, Meiru Wu, Di Mou, Hui Liu, Shouchuang Wang, Chi Zhang, Ding Li, Jie Luo
Software Mentions: 1
Published: over 8 years ago

10.1002/2211-5463.13139

CRISPR‐based knock‐in mutagenesis of the pioneer transcription factor FOXA1: optimization of strategies for multi‐allelic proteins in cancer cells
Cited by: 4
Author(s): Li Shen, Joseph P. Garay, Colby A. Tubbs, Hector L. Franco
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21082666

Transcriptional Profiling of the Probiotic Escherichia coli Nissle 1917 Strain under Simulated Microgravity
Cited by: 19
Author(s): Jaewoo Yim, Sung Won Cho, Beomhee Kim, Sungwoo Park, Yong Han, Sang Woo Seo
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-24515-8

Towards annotating the plant epigenome: the Arabidopsis thaliana small RNA locus map
Cited by: 12
Author(s): Thomas J. Hardcastle, Sebastian Müller, David C. Baulcombe
Software Mentions: 1
Published: over 8 years ago

10.12688/f1000research.15931.2

FastQ Screen: A tool for multi-genome mapping and quality control
Cited by: 682
Author(s): Steven Wingett, Simon Andrews
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0173238

RNA-Seq analysis of salinity stress–responsive transcriptome in the liver of spotted sea bass (Lateolabrax maculatus)
Cited by: 56
Author(s): Xiaoyan Zhang, Haishen Wen, Hailiang Wang, Yuanyuan Ren, Ji Zhao, Yun Li
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-27013-z

Deep Transcriptomic Analysis of Black Rockfish (Sebastes schlegelii) Provides New Insights on Responses to Acute Temperature Stress
Cited by: 31
Author(s): Likang Lyu, Haishen Wen, Yun Li, Jifang Li, Ji Zhao, Simin Zhang, Min Song, Xiaojie Wang
Software Mentions: 1
Published: over 8 years ago

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Papers Mentioning bowtie 1,566