Ecosyste.ms: Papers

10.1186/s12859-019-3059-z

HPAanalyze: an R package that facilitates the retrieval and analysis of the Human Protein Atlas data
Cited by: 28
Author(s): Anh Tran, Alex M. Dussaq, Timothy Kennell, Christopher D. Willey, Anita B. Hjelmeland
Software Mentions: 18
Published: about 5 years ago

10.7717/peerj.7476

Estimating the phylogeny of geoemydid turtles (Cryptodira) from landmark data: an assessment of different methods
Cited by: 9
Author(s): Eduardo Ascarrunz, Claude Julien, Walter G. Joyce
Software Mentions: 8
Published: about 5 years ago

10.3389/fonc.2019.01569

The Impact of Surgery in IDH 1 Wild Type Glioblastoma in Relation With the MGMT Deregulation
Cited by: 13
Author(s): Francesco Marchi, Nora Sahnane, Roberta Cerutti, Debora Cipriani, Jessica Barizzi, Federico Mattia Stefanini, Samantha Epistolio, Michele Cerati, Sergio Balbi, Luca Mazzucchelli, Fausto Sessa, G. Pesce, Michael Reinert, Milo Frattini
Software Mentions: 6
Published: over 4 years ago

10.1186/s12888-015-0685-5

Distinguishing bipolar and major depressive disorders by brain structural morphometry: a pilot study
Cited by: 66
Author(s): Gabriel Pui Cheong Fung, Yi Deng, Qing Zhao, Zhi Li, Miao Qu, Li Ke, Yonghu Zeng, Jin Zhou, Yantao Ma, Xin Yu, Zhiren Wang, David Shum, Raymond C.K. Chan
Software Mentions: 5
Published: almost 9 years ago

10.1371/journal.pone.0149852

How to Rank Journals
Cited by: 46
Author(s): Corey J. A. Bradshaw, Barry W. Brook
Software Mentions: 5
Published: over 8 years ago

10.7717/peerj.515

Whale shark economics: a valuation of wildlife tourism in South Ari Atoll, Maldives
Cited by: 40
Author(s): E. Fernando Cagua, Neal M Collins, James Hancock, Richard Rees
Software Mentions: 5
Published: about 10 years ago

10.3390/genes12020138

Mitochondrial Genome Evolution, Genetic Diversity, and Population Structure in British Water Voles (Arvicola amphibius)
Cited by: 2
Author(s): Corey Kirkland, Marta Farré
Software Mentions: 4
Published: over 3 years ago

10.1016/j.gpb.2019.11.011

iGMDR: Integrated Pharmacogenetic Resource Guide to Cancer Therapy and Research
Cited by: 5
Author(s): Xiang Chen, Yi Guo, Xin Chen
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0131333

Speeding Up Non-Parametric Bootstrap Computations for Statistics Based on Sample Moments in Small/Moderate Sample Size Applications
Cited by: 2
Author(s): Elias Chaibub Neto
Software Mentions: 4
Published: about 9 years ago

10.1371/journal.pone.0123806

Geographic Mosaic of Plant Evolution: Extrafloral Nectary Variation Mediated by Ant and Herbivore Assemblages
Cited by: 25
Author(s): Anselmo Nogueira, Pedro J. Rey, Julio M. Alcántara, Rodrigo M. Feitosa, Lúcia G. Lohmann
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pone.0195472

Distinct seasonal infectious agent profiles in life-history variants of juvenile Fraser River Chinook salmon: An application of high-throughput genomic screening
Cited by: 33
Author(s): Strahan Tucker, Shaorong Li, Karia H. Kaukinen, David A. Patterson, Kristina M. Miller
Software Mentions: 4
Published: over 6 years ago

10.1186/s12866-015-0351-6

The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies
Cited by: 365
Author(s): J. Paul Brooks, D.J. Edwards, Michael Harwich, Maria C. Rivera, Jennifer M. Fettweis, Myrna G. Serrano, Robert Reris, Nihar U. Sheth, Bernice Huang, Philippe H. Girerd, Jerome F. Strauss, Kimberly K. Jefferson, Gregory A. Buck
Software Mentions: 4
Published: over 9 years ago

10.1093/bioinformatics/btab263

Build a better bootstrap and the RAWR shall beat a random path to your door: phylogenetic support estimation revisited
Cited by: 1
Author(s): Wei Wang, Ahmad Hejasebazzi, Julia Zheng, Kevin J. Liu
Software Mentions: 4
Published: about 3 years ago

10.1093/database/baz089

PICEAdatabase: a web database for Picea omics and phenotypic information
Cited by: 2
Author(s): Nan Lu, Tianqing Zhu, Fangqun Ouyang, Yan Xia, Qingfen Li, Zirui Jia, Hu Jiwen, Juanjuan Ling, Wenjun Ma, Guijuan Yang, Hanguo Zhang, Lisheng Kong, Junhui Wang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0061737

Simultaneous Analysis and Quality Assurance for Diffusion Tensor Imaging
Cited by: 59
Author(s): Carolyn B. Lauzon, Andrew J. Asman, Michael L. Esparza, Scott S. Burns, Qiuyun Fan, Yurui Gao, Adam W. Anderson, Nicole Davis, Laurie E. Cutting, Bennett A. Landman
Software Mentions: 3
Published: over 11 years ago

10.3389/fmicb.2018.03336

iVikodak—A Platform and Standard Workflow for Inferring, Analyzing, Comparing, and Visualizing the Functional Potential of Microbial Communities
Cited by: 45
Author(s): Sunil Nagpal, Mohammed Monzoorul Haque, Rashmi Singh, Sharmila S. Mande
Software Mentions: 3
Published: over 5 years ago

10.1186/1477-7525-8-68

Reliability of 95% confidence interval revealed by expected quality-of-life scores: an example of nasopharyngeal carcinoma patients after radiotherapy using EORTC QLQ-C 30
Cited by: 11
Author(s): Tsair Wei Chien, Shun Jin Lin, Wen Chung Wang, Henry W.C. Leung, Wen Pin Lai, Agnes L. F. Chan
Software Mentions: 3
Published: about 14 years ago

10.1093/database/baaa095

OUP accepted manuscript
Cited by: 1
Author(s): Stéphane Télétchéa, Fabrice Teletchea
Software Mentions: 3
Published: over 4 years ago

10.4172/jpb.1000401

Mechanistic Parameterization of the Kinomic Signal in Peptide Arrays
Cited by: 7
Author(s): Alex M. Dussaq, Joshua C. Anderson, Christopher D. Willey, Jonas S. Almeida
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0216594

coreMRI: A high-performance, publicly available MR simulation platform on the cloud
Cited by: 11
Author(s): Christos G. Xanthis, Anthony H. Aletras
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.2537

Concordance between stabilizing sexual selection, intraspecific variation, and interspecific divergence in<i>Phymata</i>
Cited by: 8
Author(s): David Punzalan, Locke Rowe
Software Mentions: 2
Published: almost 8 years ago

10.1186/s13059-016-0889-0

Genome-wide introgression among distantly related Heliconius butterfly species
Cited by: 108
Author(s): W. Zhang, Kanchon K. Dasmahapatra, James Mallet, Gilson R. P. Moreira, Marcus R. Kronforst
Software Mentions: 2
Published: over 8 years ago