Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: blast

https://packages.ecosyste.ms/registries/pypi.org/packages/blast

a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
3 versions
Latest release: over 12 years ago
120 downloads last month

Papers Mentioning blast 1,819

10.1093/jxb/erw500

A novel inversion in the chloroplast genome of marama (Tylosema esculentum)
Cited by: 25
Author(s): Yunsoo Kim, Christopher A. Cullis
Software Mentions: 1
Published: almost 8 years ago

Analysis of Virion Structural Components Reveals Vestiges of the Ancestral Ichnovirus Genome
Cited by: 118
Author(s): Anne Nathalie Volkoff, Véronique Jouan, Serge Urbach, Sylvie Samain, Max Bergoin, Patrick Wincker, Edith Demettre, Clément François, Bertille Provost, F. Coulibaly, Fabrice Legeai, Catherine Béliveau, Michel Cusson, Gábor Gyapay, Jean‐Michel Drezen
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.ppat.1001129

Crystal Structure of Legionella DotD: Insights into the Relationship between Type IVB and Type II/III Secretion Systems
Cited by: 47
Author(s): Nobuaki Nakano, Tomoko Kubori, Miki Kinoshita, Katsumi Imada, Hiroki Nagai
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.ppat.1004209

Fructose-Asparagine Is a Primary Nutrient during Growth of Salmonella in the Inflamed Intestine
Cited by: 59
Author(s): Mohamed M. Ali, David L. Newsom, Juan F. González, Anice Sabag-Daigle, Christopher C. Stahl, Brandi L. Steidley, Judith Dubena, Jessica L. Dyszel, Jenée N. Smith, Yakhya Dieye, Razvan Arsenescu, Prosper N. Boyaka, Steven Krakowka, Tony Romeo, E. J. Behrman, Peter White, Brian M. M. Ahmer
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.ppat.1008003

Shiga toxin sub-type 2a increases the efficiency of Escherichia coli O157 transmission between animals and restricts epithelial regeneration in bovine enteroids
Cited by: 32
Author(s): Stephen Fitzgerald, Amy Elizabeth Beckett, Javier Palarea‐Albaladejo, Sean P. McAteer, Sharif Shaaban, Jason K. Morgan, Nur Indah Ahmad, Rachel Young, Neil A. Mabbott, Liam J. Morrison, James L. Bono, David L. Gally, Tom N. McNeilly
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009545

Origin and evolution of the zinc finger antiviral protein
Cited by: 24
Author(s): Daniel Gonçalves-Carneiro, Matthew A Takata, Heley Ong, Amanda Shilton, Paul D. Bieniasz
Software Mentions: 1
Published: over 3 years ago

10.1186/1477-5956-11-7

Proteins from Tuber magnatum Pico fruiting bodies naturally grown in different areas of Italy
Cited by: 11
Author(s): Federico Vita, Valentina Lucarotti, Emanuele Alpi, Raffaella Balestrini, Antonietta Mello, Ángela Bachi, Massimo Alessio, Amedeo Alpi
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12953-015-0077-2

Proteome analysis of shell matrix proteins in the brachiopod Laqueus rubellus
Cited by: 24
Author(s): Yukinobu Isowa, Isao Sarashina, Koichiro Oshima, Keiji Kito, Masahira Hattori, Kazuhiko Endo
Software Mentions: 1
Published: over 9 years ago

10.1098/rsos.171415

The muscle development transcriptome landscape of ovariectomized goat
Cited by: 12
Author(s): Sihuan Zhang, Han Xu, Xinfeng Liu, Qing Yang, Chuanying Pan, Chuzhao Lei, Ruihua Dang, Hong Chen, Xianyong Lan
Software Mentions: 1
Published: almost 7 years ago

10.1186/1477-7827-10-25

Involvement of Src family of kinases and cAMP phosphodiesterase in the luteinizing hormone/chorionic gonadotropin receptor-mediated signaling in the corpus luteum of monkey
Cited by: 15
Author(s): Shah B Kunal, Killivalavan Asaithambi, R. Medhamurthy
Software Mentions: 1
Published: over 12 years ago

10.1186/s12284-019-0326-6

Identification and characterization of a spotted-leaf mutant spl40 with enhanced bacterial blight resistance in rice
Cited by: 25
Author(s): Atul Prakash Sathe, Xin Su, Zheng Chen, Ting Chen, Xiangjin Wei, Shaoqing Tang, Xiaobo Zhang, Jianli Wu
Software Mentions: 1
Published: about 5 years ago

10.1038/sdata.2016.115

Transcriptome characterisation and simple sequence repeat marker discovery in the seagrass Posidonia oceanica
Cited by: 11
Author(s): Daniela D’Esposito, Luigi Orrù, Emanuela Dattolo, Letizia Bernardo, Antonella Lamontanara, Luisa Orsini, Ilia Anna Serra, Silvia Mazzuca, Gabriele Procaccini
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41597-020-0408-8

Transcriptomic resources for evolutionary studies in flat periwinkles and related species
Cited by: 0
Author(s): João Pedro Marques, Graciela Sotelo, Juan Galindo, Pragya Chaube, Diana Costa, Sandra Afonso, Marina Panova, Katja Nowick, Roger K. Butlin, Johan Hollander, Rui Faria
Software Mentions: 1
Published: over 4 years ago

10.1038/s41597-020-00666-0

Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root-knot nematode
Cited by: 28
Author(s): Georgios Koutsovoulos, Marine Poullet, Abdelnaser Elashry, Djampa Kozlowski, Erika Sallet, Martine Da Rocha, Laetitia Perfus‐Barbeoch, Cristina Martín-Jimenez, Juerg E. Frey, Christian H. Ahrens, Sebastian Kiewnick, Étienne Danchin
Software Mentions: 1
Published: about 4 years ago

10.1038/srep09780

Local adaptation of Gymnocypris przewalskii (Cyprinidae) on the Tibetan Plateau
Cited by: 44
Author(s): Renyi Zhang, Arne Ludwig, Cunfang Zhang, Chao Tong, Guogang Li, Yongtao Tang, Zuogang Peng, Kai Zhao
Software Mentions: 1
Published: over 9 years ago

10.1038/srep11571

Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts
Cited by: 49
Author(s): Guillaume Morel, Lieven Sterck, Dominique Swennen, Marina Marcet‐Houben, Djamila Onésime, Anthony Levasseur, Noémie Jacques, Sandrine Mallet, Arnaud Couloux, Karine Labadie, Joëlle Amselem, Jean-Marie Beckerich, Bernard Henrissat, Yves Van de Peer, Patrick Wincker, Jean-Luc Souciet, Toni Gabaldón, Colin R. Tinsley, Serge Casarégola
Software Mentions: 1
Published: over 9 years ago

10.1038/srep12940

Splenic red pulp macrophages are intrinsically superparamagnetic and contaminate magnetic cell isolates
Cited by: 40
Author(s): Lars Franken, Marika Klein, Marina Spasova, Anna Elsukova, Ulf Wiedwald, Meike Welz, Percy A. Knolle, Michael Farle, Andreas Limmer, Christian Kurts
Software Mentions: 1
Published: over 9 years ago

10.1038/srep14835

Phylum-wide analysis of genes/proteins related to the last steps of assembly and export of extracellular polymeric substances (EPS) in cyanobacteria
Cited by: 67
Author(s): Sara B. Pereira, Rita Mota, Cristina Vieira, Jorge Vieira, Paula Tamagnini
Software Mentions: 1
Published: about 9 years ago