pypi: blast | Projects | Ecosyste.ms: Papers

10.1111/1751-7915.12179

Biogas production using anaerobic groundwater containing a subterranean microbial community associated with the accretionary prism
Cited by: 8
Author(s): Kyohei Baito, Satomi Imai, Masayuki Matsushita, Miku Otani, Yu Sato, Hiroyuki Kimura
Software Mentions: 1
Published: almost 12 years ago

10.3390/ma14061372

Impact of the Diet on the Formation of Oxidative Stress and Inflammation Induced by Bacterial Biofilm in the Oral Cavity
Cited by: 7
Author(s): Ilona Rowińska, Adrianna Szyperska-Ślaska, Piotr Zariczny, Robert Pasławski, Karol Kramkowski, Paweł Kowalczyk
Software Mentions: 1
Published: over 5 years ago

10.1111/1751-7915.12295

Efflux pump‐deficient mutants as a platform to search for microbes that produce antibiotics
Cited by: 9
Author(s): Carlos Molina-Santiago, Zulema Udaondo, Abdelali Daddaoua, Amalia Roca, Jesús Martín, Ignacio Pérez‐Victoria, Fernando Reyes, Juan L. Ramos
Software Mentions: 1
Published: over 11 years ago

10.1186/1475-2859-11-134

Re-annotation of the CAZy genes of Trichoderma reesei and transcription in the presence of lignocellulosic substrates
Cited by: 140
Author(s): Mari Häkkinen, Mikko Arvas, Merja Oja, Nina Aro, Merja Penttilä, Markku Saloheimo, Tiina Pakula
Software Mentions: 1
Published: over 14 years ago

10.3390/md10102280

Assessment of the Bacteriocinogenic Potential of Marine Bacteria Reveals Lichenicidin Production by Seaweed-Derived Bacillus spp.
Cited by: 38
Author(s): Maria Luz Prieto, L. O’Sullivan, Shiau Pin Tan, Peter McLoughlin, Helen Hughes, Paula M. O’Connor, Paul D. Cotter, Peadar G. Lawlor, Gillian E. Gardiner
Software Mentions: 1
Published: almost 14 years ago

10.1264/jsme2.ME16179

Predominant but Previously-overlooked Prokaryotic Drivers of Reductive Nitrogen Transformation in Paddy Soils, Revealed by Metatranscriptomics
Cited by: 59
Author(s): Yoko Masuda, Hideomi Itoh, Yutaka Shiratori, Kazuo Isobe, Shigeto Otsuka, Keishi Senoo
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-35983-3

SOX2 participates in spermatogenesis of Zhikong scallop Chlamys farreri
Cited by: 15
Author(s): Suzhe Liang, Danwen Liu, Xixi Li, Maokai Wei, Xiaobin Yu, Li Qi, Huixin Ma, Zhifeng Zhang, Zhenkui Qin
Software Mentions: 1
Published: over 7 years ago

10.1264/jsme2.ME14156

Phylogenetic Diversity of Peltigera Cyanolichens and Their Photobionts in Southern Chile and Antarctica
Cited by: 23
Author(s): Catalina Zúñiga, Diego Leiva, Lía Ramírez-Fernández, Margarita Carú, Rebecca Yahr, Julieta Orlando
Software Mentions: 1
Published: over 11 years ago

10.3390/md13020879

New Insights on the Terpenome of the Red Seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta)
Cited by: 31
Author(s): Louisi Souza de Oliveira, Diogo A. Tschoeke, Aline Lourenço de Oliveira, Lilian Jorge Hill, Wladimir Costa Paradas, Leonardo T. Salgado, Cristiane C. Thompson, Renato Crespo Pereira, Fabiano L. Thompson
Software Mentions: 1
Published: over 11 years ago

10.1099/mgen.0.000065

Transcriptomic analysis of staphylococcal sRNAs: insights into species-specific adaption and the evolution of pathogenesis
Cited by: 8
Author(s): William H. Broach, Amy L. Weiss, Lindsey N. Shaw
Software Mentions: 1
Published: about 10 years ago

10.3390/md16010030

Characterization of a Novel Alginate Lyase from Marine Bacterium Vibrio furnissii H1
Cited by: 28
Author(s): Xiaoyan Zhu, Xiangqian Li, Hao Shi, Jia Zhou, Zhiyong Tan, Mengdi Yuan, Ping Yao, Xiaoyan Liu
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-019-38733-1

Plasmid DNA contaminant in molecular reagents
Cited by: 20
Author(s): N. Wally, Martina Schneider, Jakob Thannesberger, Marie-Theres Kastner, Tamás Bakonyi, Stanislav Indik, Thomas Rattei, Janis R. Bedarf, Falk Hildebrand, John Lok Man Law, Juan Jovel, Christoph Steininger
Software Mentions: 1
Published: over 7 years ago

10.1099/mgen.0.000476

Comprehensive genome analyses of Sellimonas intestinalis, a potential biomarker of homeostasis gut recovery
Cited by: 23
Author(s): Marina Muñoz, Enzo Guerrero-Araya, Catalina Cortés-Tapia, Ángela Plaza-Garrido, Trevor D. Lawley, Daniel Paredes-Sabja
Software Mentions: 1
Published: almost 6 years ago

10.1099/mgen.0.000213

MinION nanopore sequencing identifies the position and structure of bacterial antibiotic resistance determinants in a multidrug-resistant strain of enteroaggregative Escherichia coli
Cited by: 32
Author(s): David R. Greig, Timothy J. Dallman, Katie L. Hopkins, Claire Jenkins
Software Mentions: 1
Published: almost 8 years ago

10.3390/md18090460

Marine Fungus Aspergillus chevalieri TM2-S6 Extract Protects Skin Fibroblasts from Oxidative Stress
Cited by: 14
Author(s): Sophia Letsiou, Artemis Bakea, Géraldine Le Goff, Philippe Lopes, Κonstantinos Gardikis, Michal Weis, Yehuda Benayahu, Jamal Ouazzani
Software Mentions: 1
Published: about 6 years ago

10.3390/md18020102

A Truncated Galectin-3 Isolated from Skin Mucus of Atlantic Salmon Salmo salar Binds to and Modulates the Proteome of the Gram-Negative Bacteria Moritella viscosa
Cited by: 9
Author(s): Deepti Manjari Patel, Yoichiro Kitani, Kjetil Korsnes, Martin Haugmo Iversen, Monica F. Brinchmann
Software Mentions: 1
Published: over 6 years ago

10.3390/md17050275

Widespread Existence of Quorum Sensing Inhibitors in Marine Bacteria: Potential Drugs to Combat Pathogens with Novel Strategies
Cited by: 27
Author(s): Jingjing Zhao, Xinyun Li, Xiyan Hou, Chunshan Quan, Ming Chen
Software Mentions: 1
Published: over 7 years ago

10.1007/s10126-021-10042-7

Development and Interrogation of a Transcriptomic Resource for the Giant Triton Snail (Charonia tritonis)
Cited by: 6
Author(s): Anne Klein, Cherie A. Motti, Adam K. Hillberg, Tomer Ventura, Peter Thomas‐Hall, Thomas R. Armstrong, Thomas H. Barker, Paul Whatmore, Scott F. Cummins
Software Mentions: 1
Published: over 5 years ago

10.1099/mgen.0.000353

Origin, maintenance and spread of antibiotic resistance genes within plasmids and chromosomes of bloodstream isolates of Escherichia coli
Cited by: 18
Author(s): Cosmika Goswami, Stephen Fox, Matthew T. G. Holden, Martin Connor, Alistair Leanord, Thomas J. Evans
Software Mentions: 1
Published: over 6 years ago

10.1186/1475-2875-8-69

A systematic classification of Plasmodium falciparum P-loop NTPases: structural and functional correlation
Cited by: 12
Author(s): Deepti Gangwar, Mridul Kalita, Dinesh Gupta, Virander S. Chauhan, Asif Mohmmed
Software Mentions: 1
Published: over 17 years ago

10.1099/mgen.0.000191

Genome analysis of methicillin resistance in Macrococcus caseolyticus from dairy cattle in England and Wales
Cited by: 14
Author(s): Alison Macfadyen, Elizabeth Fisher, Ben Costa, C. Fiona Cullen, Gavin K. Paterson
Software Mentions: 1
Published: about 8 years ago

10.1186/1471-2148-7-43

Tic62: a protein family from metabolism to protein translocation
Cited by: 53
Author(s): Mónica Balsera, Anna Stengel, Jürgen Soll, Bettina Bölter
Software Mentions: 1
Published: over 19 years ago

10.1186/s12936-018-2316-3

Presence of novel triple mutations in the pvdhfr from Plasmodium vivax in Mangaluru city area in the southwestern coastal region of India
Cited by: 9
Author(s): Shiny Joy, Susanta Kumar Ghosh, Rajeshwara N. Achur, D. Channe Gowda, Namita Surolia
Software Mentions: 1
Published: over 8 years ago

10.1099/mgen.0.000090

Putatively novel serotypes and the potential for reduced vaccine effectiveness: capsular locus diversity revealed among 5405 pneumococcal genomes
Cited by: 29
Author(s): Andries J. van Tonder, James E. Bray, Sigríður Júlía Quirk, Gunnsteinn Haraldsson, Keith A. Jolley, Martin C. J. Maiden, Steen Hoffmann, Stephen D. Bentley, Ásgeir Haraldsson, Helga Erlendsdóttir, Karl G. Kristinsson, Angela B. Brueggemann
Software Mentions: 1
Published: almost 10 years ago

10.1099/mgen.0.000567

Harmonization of whole-genome sequencing for outbreak surveillance of Enterobacteriaceae and Enterococci
Cited by: 7
Author(s): Casper Jamin, Sien De Koster, Stefanie van Kleef-van Koeveringe, Dieter De Coninck, Klaas Mensaert, Katrien De Bruyne, Natascha Perales Selva, Christine Lammens, Herman Goossens, Christian J. P. A. Hoebe, Paul H. M. Savelkoul, Lieke B. van Alphen
Software Mentions: 1
Published: about 5 years ago

10.1099/mgen.0.000296

An in silico survey of Clostridioides difficile extrachromosomal elements
Cited by: 4
Author(s): Bastian Hornung, Ed J. Kuijper, Wiep Klaas Smits
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2148-11-356

Pathogen-origin horizontally transferred genes contribute to the evolution of Lepidopteran insects
Cited by: 38
Author(s): Zi-Wen Li, Yi Hong Shen, Zhong Huai Xiang, Ze Zhang
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12936-018-2188-6

Drug resistance genes: pvcrt-o and pvmdr-1 polymorphism in patients from malaria endemic South Western Coastal Region of India
Cited by: 17
Author(s): Shiny Joy, Benudhar Mukhi, Susanta Kumar Ghosh, Rajeshwara N. Achur, D. Channe Gowda, Namita Surolia
Software Mentions: 1
Published: over 8 years ago

10.1099/mgen.0.000228

PhasomeIt: an ‘omics’ approach to cataloguing the potential breadth of phase variation in the genus Campylobacter
Cited by: 16
Author(s): Jack Aidley, Joseph J. Wanford, Luke R. Green, Samuel K. Sheppard, Christopher D. Bayliss
Software Mentions: 1
Published: almost 8 years ago

10.1099/mgen.0.000129

Genomic characterization of a local epidemic Pseudomonas aeruginosa reveals specific features of the widespread clone ST395
Cited by: 17
Author(s): Marie Petitjean, Daniel Martak, Alicia Silvant, Xavier Bertrand, Benoı̂t Valot, Didier Hocquet
Software Mentions: 1
Published: almost 9 years ago

10.1099/mgen.0.000395

Epidemiological and molecular characterization of a novel adenovirus of squirrel monkeys after fatal infection during immunosuppression
Cited by: 1
Author(s): Donna Rogers, Julio C. Ruiz, Wallace B. Baze, Gloria B. McClure, Carolyn L. Smith, Ricky Urbanowski, T. Boston, Joe H. Simmons, Larry E. Williams, Christian R. Abee, John A. Vanchiere
Software Mentions: 1
Published: about 6 years ago

10.1186/s12936-017-1976-8

A new method for sequencing the hypervariable Plasmodium falciparum gene var2csa from clinical samples
Cited by: 13
Author(s): Antoine Dara, Mark A. Travassos, Matthew Adams, Sarah Schaffer DeRoo, Elliott F. Drábek, Sonia Agrawal, Miriam K. Laufer, Christopher V. Plowe, Joana C. Silva
Software Mentions: 1
Published: about 9 years ago

10.3390/life5010905

The Expansion of Animal MicroRNA Families Revisited
Cited by: 40
Author(s): Jana Hertel, Peter F. Stadler
Software Mentions: 1
Published: over 11 years ago

10.1002/cam4.1565

A distinctively expressed long noncoding <scp>RNA</scp> , <scp>RP</scp> 11‐466I1.1, may serve as a prognostic biomarker in hepatocellular carcinoma
Cited by: 9
Author(s): Junyong Zhang, Di Zhang, Qi Zhao, Jianni Qi, Li Xiao, Chengyong Qin
Software Mentions: 1
Published: over 8 years ago

10.1186/1999-3110-54-58

De novo transcriptome assembly and novel microsatellite marker information in Capsicum annuum varieties Saengryeg 211 and Saengryeg 213
Cited by: 9
Author(s): Yul-Kyun Ahn, Swati Tripathi, Young-Il Cho, Jeong-Ho Kim, Hye-Eun Lee, Do-Sun Kim, Jong-Gyu Woo, Myeong-Cheoul Cho
Software Mentions: 1
Published: almost 13 years ago

10.1186/s12862-015-0286-4

Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae
Cited by: 47
Author(s): Heather M. Hunsperger, Tejinder S. Randhawa, Rose Ann Cattolico
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-019-41936-1

Genomic insights into HSFs as candidate genes for high-temperature stress adaptation and gene editing with minimal off-target effects in flax
Cited by: 17
Author(s): Dipnarayan Saha, Pinaki Mukherjee, Sourav Dutta, Kanti Meena, S. K. Sarkar, Asit Baran Mandal, Tapash Dasgupta, Jiban Mitra
Software Mentions: 1
Published: over 7 years ago

10.1038/s41413-020-0098-z

A variant in IL6ST with a selective IL-11 signaling defect in human and mouse
Cited by: 16
Author(s): Tobias Schwerd, Freia Krause, Twigg Srf., Dominik Aschenbrenner, Y-H. Chen, Uwe Borgmeyer, Miryam Müller, Santiago Manrique, Neele Schumacher, Steven A. Wall, Jonathan Jung, Timo Damm, Glüer C-C., Jürgen Scheller, Stefan Rose‐John, Elizabeth Jones, Arian Laurence, Wilkie Aom., Dirk Schmidt-Arras, Holm H. Uhlig
Software Mentions: 1
Published: over 6 years ago

10.1016/j.btre.2020.e00551

Purification and characterization of a noble thermostable algal starch liquefying alpha-amylase from Aeribacillus pallidus BTPS-2 isolated from geothermal spring of Nepal
Cited by: 6
Author(s): Parash Mani Timilsina, Gyanu Raj Pandey, Asmita Shrestha, Manish Ojha, Tika Bahadur Karki
Software Mentions: 1
Published: almost 6 years ago

10.1080/13102818.2014.906826

NewPaenibacillus larvaebacterial isolates from honey bee colonies infected with American foulbrood disease in Egypt
Cited by: 11
Author(s): Saad Masry, Sanaa S. A. Kabeil, Elsayed E. Hafez
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2148-7-150

Thyroid hormone receptor orthologues from invertebrate species with emphasis on Schistosoma mansoni
Cited by: 60
Author(s): Wenjie Wu, Edward G. Niles, Philip T. LoVerde
Software Mentions: 1
Published: about 19 years ago

10.1186/s13068-018-1308-4

Draft genome sequence and detailed characterization of biofuel production by oleaginous microalga Scenedesmus quadricauda LWG002611
Cited by: 15
Author(s): Chitralekha Nag Dasgupta, Sanjeeva Nayaka, Kiran Toppo, Atul Kumar Singh, Uday Deshpande, Amitabikram Mohapatra
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12862-015-0301-9

The alveolate translation initiation factor 4E family reveals a custom toolkit for translational control in core dinoflagellates
Cited by: 17
Author(s): Grant D Jones, Ernest Williams, Allen R. Place, Rosemary Jagus, Tsvetan R. Bachvaroff
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-019-43235-1

Thymosin β-4 is a novel regulator for primary cilium formation by nephronophthisis 3 in HeLa human cervical cancer cells
Cited by: 14
Author(s): Jae‐Wook Lee, Hong Sug Kim, Eun‐Yi Moon
Software Mentions: 1
Published: over 7 years ago

10.1186/s13068-019-1355-5

Comparative transcriptome analysis of a long-time span two-step culture process reveals a potential mechanism for astaxanthin and biomass hyper-accumulation in Haematococcus pluvialis JNU35
Cited by: 33
Author(s): Luodong Huang, Baoyan Gao, Minmin Wu, Feifei Wang, Chengwu Zhang
Software Mentions: 1
Published: over 7 years ago

10.1099/mgen.0.000482

Cryptic prophages within a Streptococcus pyogenes genotype emm4 lineage
Cited by: 7
Author(s): Alex Remmington, Samuel Haywood, Julia Edgar, Luke R. Green, Thushan I. de Silva, Claire E. Turner
Software Mentions: 1
Published: over 5 years ago

10.1186/s13068-019-1606-5

Genomic analysis of Burkholderia sp. ISTR5 for biofunneling of lignin-derived compounds
Cited by: 40
Author(s): Raj Morya, Madan Kumar, Sanjai Singh, Indu Shekhar Thakur
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-43396-z

Proteomic and structural differences in lumpfish skin among the dorsal, caudal and ventral regions
Cited by: 7
Author(s): Deepti Manjari Patel, Katarína Bhide, Mangesh Bhide, Martin Haugmo Iversen, Monica F. Brinchmann
Software Mentions: 1
Published: over 7 years ago

10.1186/s13068-018-1148-2

Genomic and proteomic analysis of lignin degrading and polyhydroxyalkanoate accumulating β-proteobacterium Pandoraea sp. ISTKB
Cited by: 78
Author(s): Madan Kumar, Sandhya Verma, Rajesh Kumar Gazara, Manish Kumar, Ashok Pandey, Praveen Kumar Verma, Indu Shekhar Thakur
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2148-8-110

The genome of the brown alga Ectocarpus siliculosus contains a series of viral DNA pieces, suggesting an ancient association with large dsDNA viruses
Cited by: 44
Author(s): Nicolas Delaroque, Wilhelm Boland
Software Mentions: 1
Published: over 18 years ago

10.1099/mgen.0.000202

Comparative genomics of Salmonella enterica serovar Montevideo reveals lineage-specific gene differences that may influence ecological niche association
Cited by: 17
Author(s): Scott V. Nguyen, Dayna M. Harhay, James L. Bono, Timothy P. L. Smith, Patricia I. Fields, Blake A. Dinsmore, Monica Santovenia, Rong Wang, Joseph M. Bosilevac, Gregory P. Harhay
Software Mentions: 1
Published: about 8 years ago

10.3390/biom11060772

Pepscan Approach for the Identification of Protein–Protein Interfaces: Lessons from Experiment
Cited by: 2
Author(s): Angelita Rebollo, Eric Savier, Pierre Tufféry
Software Mentions: 1
Published: over 5 years ago

10.1155/2013/298920

Transcriptome Profile Analysis of Sugarcane Responses toSporisorium scitamineaInfection Using Solexa Sequencing Technology
Cited by: 38
Author(s): Qibin Wu, Liping Xu, Jinlong Guo, Yachun Su, Youxiong Que
Software Mentions: 1
Published: over 13 years ago

10.1099/mgen.0.000053

PhagePhisher: a pipeline for the discovery of covert viral sequences in complex genomic datasets
Cited by: 7
Author(s): Thomas Hatzopoulos, Siobhan C. Watkins, Catherine Putonti
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-019-46185-w

Activation of The Phosphatidylcholine to Lysophosphatidylcholine Pathway Is Associated with Osteoarthritis Knee Cartilage Volume Loss Over Time
Cited by: 31
Author(s): Guangju Zhai, Jean‐Pierre Pelletier, Ming Liu, Dawn Aitken, Edward Randell, Proton Rahman, Graeme Jones, Johanne Martel‐Pelletier
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-46321-6

The rpl23 gene and pseudogene are hotspots of illegitimate recombination in barley chloroplast mutator seedlings
Cited by: 5
Author(s): Franco Lencina, Alejandra Landau, M. Petterson, M. Pacheco, Ken Kobayashi, Alberto R. Prina
Software Mentions: 1
Published: about 7 years ago

10.1099/mgen.0.000233

The resistomes of six carbapenem-resistant pathogens – a critical genotype–phenotype analysis
Cited by: 16
Author(s): Anna Johnning, Nahid Karami, Erika Tång Hallbäck, Vilhelm Müller, Lena Nyberg, Mariana Buongermino Pereira, Callum Stewart, Tobias Ambjörnsson, Fredrik Westerlund, Ingegerd Adlerberth, Erik Kristiansson
Software Mentions: 1
Published: almost 8 years ago

10.1099/acmi.0.000044

Microbiome digital signature of MCR genes – an in silico approach to study the diversity of methanogenic population in laboratory-developed and pilot-scale anaerobic digesters
Cited by: 1
Author(s): K. Ponni Keerthana, S. Radhesh Krishnan, S. Ragunath Sengali, R. Srinivasan, N. K. Prabhakaran, G Balaji, M. Gracy, K. Latha
Software Mentions: 1
Published: about 7 years ago

10.1155/2015/817914

Effects of Nogo-A Silencing on TNF-αand IL-6 Secretion and TH Downregulation in Lipopolysaccharide-Stimulated PC12 Cells
Cited by: 11
Author(s): Jianbin Zhong, Shengnuo Fan, Zhenwen Yan, Shifu Xiao, Limei Wan, Chibang Chen, Simin Zhong, Lu Liu, Jun Liu
Software Mentions: 1
Published: over 11 years ago

10.3390/ijms19020443

Indole-3-Acetic Acid Biosynthesis Pathways in the Plant-Beneficial Bacterium Arthrobacter pascens ZZ21
Cited by: 69
Author(s): Mengsha Li, Rui Guo, Fei Yu, Chuncheng Xu, Haiyan Zhao, Huixin Li, Jun Wu
Software Mentions: 1
Published: over 8 years ago

10.1099/mgen.0.000274

Putative novel cps loci in a large global collection of pneumococci
Cited by: 10
Author(s): Andries J. van Tonder, Rebecca A. Gladstone, Stephanie Lo, Moon H. Nahm, Mignon du Plessis, Jennifer Cornick, Brenda Kwambana-Adams, Shabir A. Madhi, Paulina A. Hawkins, Rachel Benisty, Ron Dagan, Dean Everett, Martín Antonio, Keith P. Klugman, Anne von Gottberg, Robert F. Breiman, Lesley McGee, Stephen D. Bentley
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-50194-0

Functional metagenomic analysis of dust-associated microbiomes above the Red Sea
Cited by: 22
Author(s): Nojood Aalismail, David Kamanda Ngugi, Rubén Díaz‐Rúa, Intikhab Álam, Michael Cusack, Carlos M. Duarte
Software Mentions: 1
Published: almost 7 years ago

10.3390/ijms19030709

The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
Cited by: 30
Author(s): Soo‐Jin Park, Hyun Park, Yongrok Choi, Byeong-ha Lee, Jung-Eun Lee
Software Mentions: 1
Published: over 8 years ago

10.1155/2016/4575024

Production and Partial Characterization of an Alkaline Xylanase from a Novel FungusCladosporium oxysporum
Cited by: 24
Author(s): Guoqiang Guan, Pengxiang Zhao, Jin Fang Zhao, Meijuan Wang, Shuhao Huo, Fengjie Cui, Jianxin Jiang
Software Mentions: 1
Published: over 10 years ago

10.1155/2015/570568

How to Isolate a Plant’s Hypomethylome in One Shot
Cited by: 4
Author(s): Elisabeth Wischnitzki, Eva Maria Sehr, Karin Hansel-Hohl, Mária Berényi, K. Burg, Silvia Fluch
Software Mentions: 1
Published: over 11 years ago

10.1099/mgen.0.000609

Phylogenomic disentangling of the Bifidobacterium longum subsp. infantis taxon
Cited by: 9
Author(s): Chiara Tarracchini, Christian Milani, Gabriele Andrea Lugli, Leonardo Mancabelli, Federico Fontana, Giulia Alessandri, Giulia Longhi, Rosaria Anzalone, Alice Viappiani, Francesca Turroni, Douwe van Sinderen, Marco Ventura
Software Mentions: 1
Published: about 5 years ago

10.1099/mgen.0.000564

Genomics reveals the novel species placement of industrial contaminant isolates incorrectly identified as Burkholderia lata
Cited by: 2
Author(s): Edward Cunningham-Oakes, Tom Pointon, Barry Murphy, Stuart Campbell-Lee, Gordon Webster, Thomas R. Connor, Eshwar Mahenthiralingam
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-52118-4

Molecular characterization of root-knot nematodes (Meloidogyne spp.) from Arkansas, USA
Cited by: 14
Author(s): Weimin Ye, R. T. Robbins, T. L. Kirkpatrick
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-52421-0

Comparative gene expression profile analysis of ovules provides insights into Jatropha curcas L. ovule development
Cited by: 13
Author(s): Gang Xu, Jian Huang, Shikang Lei, Xueguang Sun, Li Xue
Software Mentions: 1
Published: almost 7 years ago

10.1099/mgen.0.000143

Porcine commensal Escherichia coli: a reservoir for class 1 integrons associated with IS26
Cited by: 51
Author(s): Cameron J. Reid, Ethan R. Wyrsch, Piklu Roy Chowdhury, Tiziana Zingali, Mengmeng Liu, Aaron E. Darling, Toni A. Chapman, Steven P. Djordjevic
Software Mentions: 1
Published: almost 9 years ago

10.1155/2014/246871

Cloning, Expression, Purification, and Characterization of Glutaredoxin from Antarctic Sea-Ice BacteriumPseudoalteromonassp. AN178
Cited by: 7
Author(s): Quanfu Wang, Yanhua Hou, Yonglei Shi, Xiao Han, Qian Chen, HU Zhi-guo, Yuanping Liu, YuJin Li
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-019-53106-4

Frequent occurrence of Mungbean yellow mosaic India virus in tomato leaf curl disease affected tomato in Oman
Cited by: 7
Author(s): Muhammad Shahid, Muhammad Shafiq, Muhammad Ilyas, Amir Raza, M. N. Al-Sadrani, Abdullah M. Al-Sadi, R. W. Briddon
Software Mentions: 1
Published: almost 7 years ago

10.1155/2013/675145

Isolation and Identification of Free-Living Amoebae from Tap Water in Sivas, Turkey
Cited by: 44
Author(s): Kübra Açıkalın Coşkun, Semra Özçelık, Lütfi Tutar, Nazif Elaldı, Yusuf Tutar
Software Mentions: 1
Published: over 13 years ago

10.1155/2015/580240

Identification and Characterization of a Serious Multidrug ResistantStenotrophomonas maltophiliaStrain in China
Cited by: 8
Author(s): Yan Zhao, Wenkai Niu, Yong Sun, Huaijie Hao, Dong Yu, Guangyang Xu, Xueyi Shang, Xueping Tang, LU Si-jing, Junjie Yue, Yan Li
Software Mentions: 1
Published: over 11 years ago

10.1155/2015/527015

MALDI-TOF MS and CD Spectral Analysis for Identification and Structure Prediction of a Purified, Novel, Organic Solvent Stable, Fibrinolytic Metalloprotease fromBacillus cereusB80
Cited by: 13
Author(s): Rajshree Saxena, Rajni Singh
Software Mentions: 1
Published: over 11 years ago

10.1155/2020/4374801

Complete Chloroplast Genome Sequencing and Phylogenetic Analysis of Two Dracocephalum Plants
Cited by: 12
Author(s): Junjun Yao, Fangyu Zhao, Yan Xu, Kaihui Zhao, Quan Hong, Yanjie Su, Peiyu Hao, Jiang Liu, Benxia Yu, Min Yao, Xiaojing Ma, Zhihua Liao, Xiaozhong Lan
Software Mentions: 1
Published: over 5 years ago

10.1155/2016/5683026

Full-Length cDNA, Prokaryotic Expression, and Antimicrobial Activity of UuHb-F-I fromUrechis unicinctus
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Author(s): Niu Rongli, Xiang Chen
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2148-4-36

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Author(s): Jibin Sun, Rolf Daniel, Irene Wagner‐Döbler, An‐Ping Zeng
Software Mentions: 1
Published: over 22 years ago

10.1155/2013/169794

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Software Mentions: 1
Published: over 13 years ago

10.1099/mgen.0.000372

Identification of integrative and conjugative elements in pathogenic and commensal Neisseriaceae species via genomic distributions of DNA uptake sequence dialects
Cited by: 1
Author(s): Alex Hughes-Games, Adam P. Roberts, Sean A. Davis, David J. Hill
Software Mentions: 1
Published: over 6 years ago

10.1099/mgen.0.000411

Comparative genomic insights into Yersinia hibernica – a commonly misidentified Yersinia enterocolitica-like organism
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Author(s): Scott V. Nguyen, Dechamma Mundanda Muthappa, Athmanya K. Eshwar, J. J. C. Buckley, Brenda Murphy, Roger Stephan, Angelika Lehner, Séamus Fanning
Software Mentions: 1
Published: about 6 years ago

10.3390/biology10090848

Targeted RNA-Seq Reveals the M. tuberculosis Transcriptome from an In Vivo Infection Model
Cited by: 9
Author(s): Fernanda Cornejo‐Granados, Gamaliel López-Leal, Dulce Mata-Espinosa, Jorge Barrios-Payán, Brenda Marquina‐Castillo, Edgar Equihua-Medina, Zyanya Lucía Zatarain-Barrón, Camilo Molina-Romero, Rogelio Hernández-Pando, Adrián Ochoa-Leyva
Software Mentions: 1
Published: about 5 years ago

10.1099/mgen.0.000328

DEN-IM: dengue virus genotyping from amplicon and shotgun metagenomic sequencing
Cited by: 0
Author(s): Catarina Mendes, Erley F. Lizarazo, Miguel P. Machado, Diogo N. Silva, Adriana Tami, Mário Ramirez, Natacha Couto, John W. A. Rossen, João André Carriço
Software Mentions: 1
Published: over 6 years ago

10.1242/bio.026336

Architectural delineation and molecular identification of extracellular matrix in ascidian embryos and larvae
Cited by: 11
Author(s): Jiankai Wei, Guilin Wang, Xiang Li, Ping Ren, Haiyan Yu, Bo Dong
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms19040929

The Complete Chloroplast Genome Sequence of Tree of Heaven (Ailanthus altissima (Mill.) (Sapindales: Simaroubaceae), an Important Pantropical Tree
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Author(s): Josphat K. Saina, Zhizhong Li, Andrew W. Gichira, Yi-Ying Liao
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19092518

Biochemical Characterization and Structural Modeling of Fused Glucose-6-Phosphate Dehydrogenase-Phosphogluconolactonase from Giardia lamblia
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Author(s): Laura Morales-Luna, Hugo Serrano‐Posada, Abigail González‐Valdez, Daniel Ortega-Cuéllar, América Vanoye-Carlo, Beatriz Hernández-Ochoa, Edgar Sierra-Palacios, Yadira Rufino-González, Rosa Angélica Castillo-Rodríguez, Verónica Pérez de la Cruz, Liliana M. Moreno‐Vargas, Diego Prada‐Gracia, Jaime Marcial-Quino, Saúl Gómez-Manzo
Software Mentions: 1
Published: about 8 years ago

10.1002/mbo3.175

Algae–bacteria association inferred by 16S <scp>rDNA</scp> similarity in established microalgae cultures
Cited by: 29
Author(s): Dagmar Schwenk, Liisa Nohynek, Heiko Rischer
Software Mentions: 1
Published: over 12 years ago

10.1002/mbo3.742

Selecting lipopeptide‐producing, Fusarium‐ suppressing Bacillus spp.: Metabolomic and genomic probing of Bacillus velezensis NWUMFkBS10.5
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Author(s): Adetomiwa Ayodele Adeniji, Oluwole Samuel Aremu, Olubukola Oluranti Babalola
Software Mentions: 1
Published: almost 8 years ago

10.1002/mbo3.382

Isolation of Bdellovibrio sp. from soil samples in Mexico and their potential applications in control of pathogens
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Author(s): Omotayo Opemipo Oyedara, Erick de Jesús de Luna-Santillana, Omar Olguín-Rodríguez, Xianwu Guo, Marco Antonio Mendoza-Villa, Jorge Luis Menchaca-Arredondo, Temidayo Oluyomi Elufisan, Javier A. Garza‐Hernández, Israel García-León, Mario A. Rodríguez Pérez
Software Mentions: 1
Published: over 10 years ago

10.1099/mic.0.058206-0

Molecular characterization of a novel mosaic tet(S/M) gene encoding tetracycline resistance in foodborne strains of Streptococcus bovis
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Author(s): Simona N. Barile, Chiara Devirgiliis, Giuditta Perozzi
Software Mentions: 1
Published: about 14 years ago

10.1099/mic.0.046862-0

Interaction of Bacteroides fragilis and Bacteroides thetaiotaomicron with the kallikrein–kinin system
Cited by: 28
Author(s): Elizabeth C. Murphy, Matthias Mörgelin, Jakki C. Cooney, Inga-Maria Frick
Software Mentions: 1
Published: about 15 years ago

10.1186/s13062-016-0136-3

Alpha proteobacterial ancestry of the [Fe-Fe]-hydrogenases in anaerobic eukaryotes
Cited by: 23
Author(s): Mauro Degli Esposti, Diego Cortez, Luis Lozano, Simon Rasmussen, Henrik Bjørn Nielsen, Esperanza Martı́nez-Romero
Software Mentions: 1
Published: about 10 years ago

10.1099/mic.0.001003

Tn1 transposition in the course of natural transformation enables horizontal antibiotic resistance spread in Acinetobacter baylyi
Cited by: 7
Author(s): Julia Maria Kloos, Pål Jarle Johnsen, Klaus Harms
Software Mentions: 1
Published: over 5 years ago

10.1099/mic.0.067280-0

Characterization of genes required for the pathogenicity of Pectobacterium carotovorum subsp. carotovorum Pcc21 in Chinese cabbage
Cited by: 58
Author(s): Dong Hwan Lee, Joong‐Soo Lim, Juneok Lee, Eunjung Roh, Kyu-Suk Jung, Mansoo Choi, Chang‐Sik Oh, Sangryeol Ryu, Jong‐Chul Yun, Sunggi Heu
Software Mentions: 1
Published: about 13 years ago

10.1186/1471-2148-8-44

Slipins: ancient origin, duplication and diversification of the stomatin protein family
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Author(s): Jasper B. Green, J. Peter W. Young
Software Mentions: 1
Published: over 18 years ago

10.1099/mic.0.000963

Activation of a [NiFe]-hydrogenase-4 isoenzyme by maturation proteases
Cited by: 3
Author(s): Alexander J. Finney, Grant Buchanan, Tracy Palmer, Sarah J. Coulthurst, Frank Sargent
Software Mentions: 1
Published: about 6 years ago

10.1099/mic.0.040147-0

The ham-5, rcm-1 and rco-1 genes regulate hyphal fusion in Neurospora crassa
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Author(s): Mash'el Salman Aldabbous, M. Gabriela Roca, Angela Stout, I-Ching Huang, Nick D. Read, Stephen J. Free
Software Mentions: 1
Published: about 16 years ago

10.3390/ijms19092501

Normal and Abortive Buds Transcriptomic Profiling of Broccoli ogu Cytoplasmic Male Sterile Line and Its Maintainer
Cited by: 7
Author(s): Jinshuai Shu, Lili Zhang, Yumei Liu, Zhansheng Li, Zhiyuan Fang, Limei Yang, Mu Zhuang, Yangyong Zhang, Honghao Lv
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms20205127

miR-7 Knockdown by Peptide Nucleic Acids in the Ascidian Ciona intestinalis
Cited by: 6
Author(s): Silvia Mercurio, Silvia Cauteruccio, Raoul Manenti, Simona Candiani, Giorgio Scarı̀, Emanuela Licandro, Roberta Pennati
Software Mentions: 1
Published: almost 7 years ago

10.1099/mic.0.000280

Dissecting the role of histidine kinase and HOG1 mitogen-activated protein kinase signalling in stress tolerance and pathogenicity of Parastagonospora nodorum on wheat
Cited by: 8
Author(s): Evan John, Francisco J. López-Ruiz, Kasia Rybak, Carl J. Mousley, Richard P. Oliver, Kar‐Chun Tan
Software Mentions: 1
Published: over 10 years ago

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