pypi: blast | Projects | Ecosyste.ms: Papers

10.1111/j.1462-2920.2008.01760.x

Reverse dissimilatory sulfite reductase as phylogenetic marker for a subgroup of sulfur‐oxidizing prokaryotes
Cited by: 135
Author(s): Alexander Loy, Stephan Duller, Christian Baranyi, Marc Mußmann, Jörg Ott, Itai Sharon, Oded Béjà, Denis Le Paslier, Christiane Dahl, Michael Wagner
Software Mentions: 1
Published: over 16 years ago

10.1186/s12864-019-6365-y

Mitochondrial genomes of the early land plant lineage liverworts (Marchantiophyta): conserved genome structure, and ongoing low frequency recombination
Cited by: 20
Author(s): Shanshan Dong, Chaoxian Zhao, Shouzhou Zhang, Li Zhang, Hong Wu, Sunil Kumar Sahu, Rui‐Liang Zhu, Yu Jia, Bernard Goffinet, Yang Liu
Software Mentions: 1
Published: over 5 years ago

10.3390/antibiotics10080896

Molecular Cloning and Functional Identification of the Antimicrobial Peptide Gene Ctri9594 from the Venom of the Scorpion Chaerilus tricostatus
Cited by: 2
Author(s): Dangui He, Zhijian Cao, Ruhong Zhang, Wenhua Li
Software Mentions: 1
Published: about 4 years ago

10.1111/j.1462-2920.2008.01650.x

The exopolysaccharide ofRhizobiumsp. YAS34 is not necessary for biofilm formation onArabidopsis thalianaandBrassica napusroots but contributes to root colonization
Cited by: 87
Author(s): Catherine Santaella, Mathieu Schué, Odile Berge, Thierry Heulin, Wafa Achouak
Software Mentions: 1
Published: about 17 years ago

10.5812/ircmj.4024

Sequence Characterization of cDNA Sequence of Encoding of an Antimicrobial Peptide With No Disulfide Bridge from the Iranian Mesobuthus Eupeus Venomous Glands
Cited by: 5
Author(s): Ahmad Farajzadeh Sheikh, Abbas Jolodar, Shamsedin Ghaemmaghami
Software Mentions: 1
Published: over 12 years ago

10.1111/j.1462-2920.2012.02774.x

The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
Cited by: 222
Author(s): Jack van de Vossenberg, Dagmar Woebken, Wouter J. Maalcke, Hans Wessels, Bas E. Dutilh, Boran Kartal, Eva M. Janssen-Megens, Guus Roeselers, Jia Yan, Daan R. Speth, Jolein Gloerich, Wim Geerts, Erwin van der Biezen, Wendy Pluk, Kees−Jan Françoijs, Lina Russ, Phyllis Lam, Stephanie Malfatti, Susannah G. Tringe, Suzanne Caroline Marianne Haaijer, Huub J. M. Op den Camp, Henk Stunnenberg, Rudolf Amann, Marcel M. M. Kuypers, Mike S. M. Jetten
Software Mentions: 1
Published: about 13 years ago

10.1111/1462-2920.14056

Distribution of thermophilic endospores in a temperate estuary indicate that dispersal history structures sediment microbial communities
Cited by: 19
Author(s): Emma Bell, Lynsay I. Blake, Angela Sherry, Ian M. Head, Claude Hubert
Software Mentions: 1
Published: over 7 years ago

10.1111/1462-2920.13895

Transient exposure to oxygen or nitrate reveals ecophysiology of fermentative and sulfate‐reducing benthic microbial populations
Cited by: 26
Author(s): Sainab Saad, Srijak Bhatnagar, Halina E. Tegetmeyer, Jeanine S. Geelhoed, Marc Strous, S. Emil Ruff
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2164-8-86

Phylogenomic analysis of proteins that are distinctive of Archaea and its main subgroups and the origin of methanogenesis
Cited by: 68
Author(s): Beile Gao, Radhey S. Gupta
Software Mentions: 1
Published: over 18 years ago

10.1111/j.1462-2920.2011.02521.x

Massive dominance of Epsilonproteobacteria in formation waters from a Canadian oil sands reservoir containing severely biodegraded oil
Cited by: 119
Author(s): Claude Hubert, Thomas B. P. Oldenburg, Milovan Fustic, Neil Gray, Stephen R. Larter, Kevin Penn, AD Rowan, Rekha Seshadri, Angela Sherry, Richard Swainsbury, Gerrit Voordouw, Johanna K. Voordouw, Ian M. Head
Software Mentions: 1
Published: almost 14 years ago

10.3389/fmicb.2019.00434

Genomic and Functional Characterization of Enterococcus mundtii QAUEM2808, Isolated From Artisanal Fermented Milk Product Dahi
Cited by: 14
Author(s): Nawaz Farah, Muhammad Nadeem Khan, Aqib Javed, Ibrar Ahmed, Naeem Ali, Muhammad Ishtiaq Ali, Syeda Mariam Bakhtiar, Muhammad Imran
Software Mentions: 1
Published: over 6 years ago

10.3390/ijerph13030318

The Inflammation Response to DEHP through PPARγ in Endometrial Cells
Cited by: 18
Author(s): Qiansheng Huang, Huanteng Zhang, Yajie Chen, Yulang Chi, Shuang Dong
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2017.02530

Glyphosate Shapes a Dinoflagellate-Associated Bacterial Community While Supporting Algal Growth as Sole Phosphorus Source
Cited by: 24
Author(s): Cong Wang, Xin Lin, Ling Li, Lingxiao Lin, Senjie Lin
Software Mentions: 1
Published: over 7 years ago

10.3390/ijerph17020439

Diversity and Antimicrobial Activity of Culturable Fungal Endophytes in Solanum mauritianum
Cited by: 14
Author(s): Sharon Pauline Pelo, Vuyo Mavumengwana, Ezekiel Green
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2016.02048

Responses of Aspergillus flavus to Oxidative Stress Are Related to Fungal Development Regulator, Antioxidant Enzyme, and Secondary Metabolite Biosynthetic Gene Expression
Cited by: 57
Author(s): Jake C. Fountain, Prasad Bajaj, Spurthi N. Nayak, Liming Yang, Manish K. Pandey, Vinay Kumar, Ashwin S. Jayale, Anu Chitikineni, Robert D. Lee, Robert C. Kemerait, Rajeev K. Varshney, Bao‐Zhu Guo
Software Mentions: 1
Published: over 8 years ago

10.3390/ijerph18115515

Characterization of a Lactiplantibacillus plantarum R23 Isolated from Arugula by Whole-Genome Sequencing and Its Bacteriocin Production Ability
Cited by: 16
Author(s): Joana Barbosa, Helena Albano, Beatríz Silva, Maria Helena Almeida, Teresa Nogueira, Paula Teixeira
Software Mentions: 1
Published: about 4 years ago

10.1186/s12864-016-2709-z

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
Cited by: 260
Author(s): Jérémy Pasquier, Cédric Cabau, Thuy Thao Vi Nguyen, Elodie Jouanno, Dany Séverac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-2164-9-238

Simultaneous gene expression profiling in human macrophages infected with Leishmania major parasites using SAGE
Cited by: 53
Author(s): Fatma Z. Guerfali, Dhafer Laouini, Lamia Guizani-Tabbane, Florence Ottonès, Khadija Ben-Aissa, Alia Benkahla, Laurent Manchon, David Piquemal, Sondos Smandi, Ons Mghirbi, Thérèse Commes, Jacques Marti, Koussay Dellagi
Software Mentions: 1
Published: about 17 years ago

10.1186/s12864-016-2915-8

Target-site and non-target-site based resistance to the herbicide tribenuron-methyl in flixweed (Descurainia sophia L.)
Cited by: 67
Author(s): Qian Yang, Wei Deng, Xuefeng Li, Qin Yu, Lianyang Bai, Mingqi Zheng
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2018.01245

Genome-Wide Analysis Reveals Ancestral Lack of Seventeen Different tRNAs and Clade-Specific Loss of tRNA-CNNs in Archaea
Cited by: 0
Author(s): Yue Wu, Ping Wu, Bin Wang, Zhu‐Qing Shao
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-8-338

The G protein-coupled receptor subset of the rat genome
Cited by: 179
Author(s): David E. Gloriam, Robert Fredriksson, Helgi B. Schiöth
Software Mentions: 1
Published: over 18 years ago

10.3389/fmicb.2018.02384

WebHERV: A Web Server for the Computational Investigation of Gene Expression Associated With Endogenous Retrovirus-Like Sequences
Cited by: 3
Author(s): Konstantin Kruse, Martin Nettling, Nadine Wappler, Alexander Emmer, Malte Kornhuber, Martin S. Staege, Ivo Große
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.00701

Probiotic Consortia: Reshaping the Rhizospheric Microbiome and Its Role in Suppressing Root-Rot Disease of Panax notoginseng
Cited by: 42
Author(s): Jinhao Zhang, Lanfang Wei, Jun Yang, Waqar Ahmed, Yating Wang, FU Li-dong, Guanghai Ji
Software Mentions: 1
Published: about 5 years ago

10.3390/ijerph18126275

Lack of Zika Virus and Other Recognized Flaviviruses among the Mosquito Vectors during and Post the Hajj Mass Gathering
Cited by: 1
Author(s): Saber Yezli, Muhammad Yasir, Yara Yassin, Afnan Almazrua, Tagreed L. Alsubhi, Norah A. Othman, Abdiasiis Omar, Abdelmohsin Mo Abdoon, Yousif Eldirdiry Elamin, Abuzaid Abuzaid, Turki Ghazi Bafaraj, Hassen Alzahrani, Sameer Almahmoodi, Hussam Alzahrani, Kingsley Bieh, B. M. Alotaibi, Anas Khan, Mohammed Alzahrani, Esam I. Azhar
Software Mentions: 1
Published: about 4 years ago

10.3389/fmicb.2021.704802

Digging Up the Roots: Taxonomic and Phylogenetic Disentanglements in Corticiaceae s.s. (Corticiales, Basidiomycota) and Evolution of Nutritional Modes
Cited by: 3
Author(s): Masoomeh Ghobad-Nejhad, Ewald Langer, Karen K. Nakasone, Paul Diederich, R. Henrik Nilsson, Mario Rajchenberg, J. Ginns
Software Mentions: 1
Published: almost 4 years ago

10.3390/antibiotics10040433

The Bacterial Genomic Context of Highly Trimethoprim-Resistant DfrB Dihydrofolate Reductases Highlights an Emerging Threat to Public Health
Cited by: 7
Author(s): Claudèle Lemay-St-Denis, S. Sharma and R. Diwan, Joelle N. Pelletier
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2021.656896

Analysis of Antimicrobial Peptide Metabolome of Bacterial Endophyte Isolated From Traditionally Used Medicinal Plant Millettia pachycarpa Benth
Cited by: 13
Author(s): Ng Ngashangva, Pulok K. Mukherjee, Kusum Sharma, Mohan Chandra Kalita, Indira Sarangthem
Software Mentions: 1
Published: about 4 years ago

10.3389/fmicb.2018.02775

Hydrolytic Capabilities as a Key to Environmental Success: Chitinolytic and Cellulolytic Acidobacteria From Acidic Sub-arctic Soils and Boreal Peatlands
Cited by: 45
Author(s): Svetlana E. Belova, Nikolai V. Ravin, Т. А. Панкратов, Andrey L. Rakitin, Anastasia A. Ivanova, Alexey V. Beletsky, Andrey V. Mardanov, Jaap S. Sinninghe Damsté, Svetlana N. Dedysh
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2019.02586

Effect of Varying Nitrate Concentrations on Denitrifying Phosphorus Uptake by DPAOs With a Molecular Insight Into Pho Regulon Gene Expression
Cited by: 2
Author(s): Chandan Mukherjee, Rajojit Chowdhury, Mst. Momtaj Begam, Sayak Ganguli, Ritabrata Basak, Basab Chaudhuri, Krishna Ray
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.01611

Antimicrobial Susceptibility and Virulence of mcr-1-Positive Enterobacteriaceae in China, a Multicenter Longitudinal Epidemiological Study
Cited by: 8
Author(s): Bin Jiang, Pengcheng Du, Peng Jia, Enbo Liu, Timothy Kudinha, Hui Zhang, Dongxue Li, Yingchun Xu, Liangyi Xie, Qiwen Yang
Software Mentions: 1
Published: almost 5 years ago

10.1186/1471-2164-10-435

Assessing the genomic evidence for conserved transcribed pseudogenes under selection
Cited by: 62
Author(s): Amit N. Khachane, Paul M. Harrison
Software Mentions: 1
Published: over 16 years ago

10.3389/fmicb.2017.00325

Functional Characterization of Endophytic Fungal Community Associated with Oryza sativa L. and Zea mays L.
Cited by: 157
Author(s): Momota Potshangbam, Sarangthem Indira Devi, Dinabandhu Sahoo, Gary A. Strobel
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.573679

The Neuromodulator-Encoding sadA Gene Is Widely Distributed in the Human Skin Microbiome
Cited by: 7
Author(s): Arif Luqman, Susanne Zabel, Samane Rahmdel, Britta Merz, Nicole Gruenheit, Johannes Harter, Kay Nieselt, Friedrich Götz
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2164-12-263

Transcriptomic assessment of resistance to effects of an aryl hydrocarbon receptor (AHR) agonist in embryos of Atlantic killifish (Fundulus heteroclitus) from a marine Superfund site
Cited by: 51
Author(s): Marjorie F. Oleksiak, Sibel I. Karchner, Matthew J. Jenny, Diana G. Franks, David B. Mark Welch, Mark E. Hahn
Software Mentions: 1
Published: about 14 years ago

10.3389/fmicb.2021.663768

Staphylococcus saprophyticus From Clinical and Environmental Origins Have Distinct Biofilm Composition
Cited by: 11
Author(s): Opeyemi U Lawal, Martha Macêdo de Lima Barata, Maria João Fraqueza, Peder Worning, Mette Damkjær Bartels, Luísa Gonçalves, Paulo Paixão, Elsa Gonçalves, Cristina Toscano, Joanna Empel, Małgorzata Urbaś, Maria A. Domiìnguez, Henrik Westh, Hermı́nia de Lencastre, Maria Miragaia
Software Mentions: 1
Published: about 4 years ago

10.1186/s12864-015-1373-z

Transcriptomic profiling of the salt-stress response in the halophyte Halogeton glomeratus
Cited by: 55
Author(s): Juncheng Wang, Baochun Li, Yali Meng, Xiao Ma, Yong Lai, Erjing Si, Ke Yang, Ping Ren, Xianwen Shang, Huajun Wang
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2018.00349

Petrophilic, Fe(III) Reducing Exoelectrogen Citrobacter sp. KVM11, Isolated From Hydrocarbon Fed Microbial Electrochemical Remediation Systems
Cited by: 12
Author(s): Krishnaveni Venkidusamy, Ananda Rao Hari, Mallavarapu Megharaj
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2018.01662

Construction of a Shuttle Vector Using an Endogenous Plasmid From the Cyanobacterium Synechocystis sp. PCC6803
Cited by: 30
Author(s): Haojie Jin, Yan Wang, Adam Idoine, Devaki Bhaya
Software Mentions: 1
Published: about 7 years ago

10.1099/jmmcr.0.005137

Ignavigranum ruoffiae, a rare pathogen that caused a skin abscess
Cited by: 2
Author(s): Adriana N. De Paulis, Eugenia Bertona, Miguel Gutiérrez, María Soledad Ramírez, Carlos Vay, Silvia C. Predari
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-018-4672-3

Elucidation of the anti-hyperammonemic mechanism of Lactobacillus amylovorus JBD401 by comparative genomic analysis
Cited by: 11
Author(s): Parul Singh, Hea-Jong Chung, Inah Lee, Roshan D’Souza, Hyeon Jin Kim, Seong‐Tshool Hong
Software Mentions: 1
Published: over 7 years ago

10.1099/jmmcr.0.005136

First confirmed case of nasal pythiosis in a horse in Thailand
Cited by: 7
Author(s): Walaiporn Tonpitak, Watcharapol Pathomsakulwong, Chulabha Sornklien, Theerapong Krajaejun, Suppathat Wutthiwithayaphong
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.00172

Q-PCR Based Culture-Independent Enumeration and Detection of Enterobacter: An Emerging Environmental Human Pathogen in Riverine Systems and Potable Water
Cited by: 20
Author(s): Chandra Bali Patel, Rishi Shanker, Vijai Kumar Gupta, Ram Sanmukh Upadhyay
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2164-7-25

The expansion of the metazoan microRNA repertoire
Cited by: 325
Author(s): Jana Hertel, Manuela Lindemeyer, Kristin Missal, Claudia Fried, Andrea Tanzer, Ivo L. Hofacker, Peter F. Stadler
Software Mentions: 1
Published: over 19 years ago

10.1186/s12864-015-2276-8

Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection
Cited by: 35
Author(s): Irene Bianconi, Julie Jeukens, Luca Freschi, Beatriz Alcalá-Franco, Marcella Facchini, Brian Boyle, Antonio Molinaro, Iréna Kukavica-Ibrulj, Burkhard Tümmler, Roger C. Levesque, Alessandra Bragonzi
Software Mentions: 1
Published: over 9 years ago

10.3389/fmolb.2016.00071

Comparative Genomics of the Conjugation Region of F-like Plasmids: Five Shades of F
Cited by: 52
Author(s): Raúl Fernández-López, María de Toro, Gabriel Moncalián, M. Pilar Garcillán-Barcia, Fernando de la Cruz
Software Mentions: 1
Published: over 8 years ago

10.3389/fnana.2015.00165

Expression of a Novel D4 Dopamine Receptor in the Lamprey Brain. Evolutionary Considerations about Dopamine Receptors
Cited by: 8
Author(s): Juan Pérez‐Fernández, Manuel Megı́as, Manuel A. Pombal
Software Mentions: 1
Published: over 9 years ago

10.1099/jmmcr.0.004218

Case of Fonsecaea nubica chromoblastomycosis from the French territory of Mayotte
Cited by: 6
Author(s): Estelle Cateau, V. Cante, Dea Garcia Hermoso, Marie‐Hélène Rodier
Software Mentions: 1
Published: over 10 years ago

10.3389/fneur.2014.00269

Effects of Low-Level Blast Exposure on the Nervous System: Is There Really a Controversy?
Cited by: 77
Author(s): Gregory A. Elder, James L. Stone, Stephen T. Ahlers
Software Mentions: 1
Published: over 10 years ago

10.3389/fnins.2017.00038

Promoter-Specific Expression and Genomic Structure of IgLON Family Genes in Mouse
Cited by: 23
Author(s): Taavi Vanaveski, Katyayani Singh, Jane Narvik, Kattri‐Liis Eskla, Tanel Visnapuu, Indrek Heinla, J. Mohan, Jürgen Innos, Kersti Lilleväli, Mari-Anne Philips, Eero Vasar
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2164-14-222

Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat
Cited by: 13
Author(s): Tatiana Belova, Bin Zhan, Jonathan Wright, Mario Cáccamo, Torben Asp, Hana Šimková, Matthew Kent, Christian Berthou, Frank Panitz, Sigbjørn Lien, Jaroslav Doležel, Odd‐Arne Olsen, Simen Rød Sandve
Software Mentions: 1
Published: over 12 years ago

10.3389/fonc.2021.665105

AnnexinA5 Might Suppress the Phenotype of Human Gastric Cancer Cells via ERK Pathway
Cited by: 6
Author(s): Xiaojie Wang, Ye Dai, Yong Zhao, Meichuan Li, Jialü Zhang, Yunzhe Ci, Huan Wang, Xin Li
Software Mentions: 1
Published: about 4 years ago

10.3389/fphar.2018.00837

Lico A Causes ER Stress and Apoptosis via Up-Regulating miR-144-3p in Human Lung Cancer Cell Line H292
Cited by: 46
Author(s): Gang Chen, Yueping Ma, Zhe Jiang, Yuan Feng, Yueqing Han, Ye-Tian Tang, Juan Zhang, Hui Ni, Xuezheng Li, Ning Li
Software Mentions: 1
Published: almost 7 years ago

10.3389/fphar.2020.560543

Knockdown lncRNA DLEU1 Inhibits Gliomas Progression and Promotes Temozolomide Chemosensitivity by Regulating Autophagy
Cited by: 22
Author(s): Qiao‐Li Lv, Li-Chong Wang, Dangchi Li, Qian-xia Lin, Xiaoli Shen, Haiyun Liu, Min Li, Yulong Ji, Chong-Zhen Qin, Shuhui Chen
Software Mentions: 1
Published: over 4 years ago

10.3389/fphys.2019.01206

Central Treatment of Ketone Body in Rainbow Trout Alters Liver Metabolism Without Apparently Altering the Regulation of Food Intake
Cited by: 5
Author(s): Sara Comesaña, Cristina Velasco, Marta Conde-Sieira, Cristina Otero-Rodiño, Jesús M. Míguez, José L. Soengas
Software Mentions: 1
Published: almost 6 years ago

10.3389/fphys.2019.00673

Genetic Profiling Reveals High Allelic Diversity, Heterozygosity and Antigenic Diversity in the Clinical Isolates of the Theileria annulata From India
Cited by: 15
Author(s): Sonti Roy, Vasundhra Bhandari, Debabrata Dandasena, Shweta Murthy, Paresh Sharma
Software Mentions: 1
Published: about 6 years ago

10.1099/jmmcr.0.005149

Total nephrectomy following Corynebacterium coyleae urinary tract infection
Cited by: 5
Author(s): Claudia Barberis, Eduardo A. Montalvo, Soledad Imas, Germán Matías Traglia, Marisa Almuzara, Carlos Hernán Rodríguez, Ángela Famiglietti, Octavio Mazzocchi, Carlos Vay
Software Mentions: 1
Published: almost 7 years ago

10.1099/jmmcr.0.005175

Post-traumatic endophthalmitis caused by Nocardia nova
Cited by: 8
Author(s): Jesús Rodríguez‐Lozano, Carlos Armiñanzas Castillo, Carlos Ruiz de Alegría Puig, Juan Antonio Ventosa Ayarza, María Carmen Fariñas, Jesús Agüero, Jorge Calvo
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2017.00425

Transcriptome Comparison Reveals the Adaptive Evolution of Two Contrasting Ecotypes of Zn/Cd Hyperaccumulator Sedum alfredii Hance
Cited by: 15
Author(s): Qianying Yang, M. J. I. Shohag, Ying Feng, Zhenli He, Xiaoe Yang
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2016.00585

De novo Taproot Transcriptome Sequencing and Analysis of Major Genes Involved in Sucrose Metabolism in Radish (Raphanus sativus L.)
Cited by: 30
Author(s): Rugang Yu, Liang Xu, Wei Zhang, Yan Wang, Xiaobo Luo, Ronghua Wang, Xiaoming Zhu, Yang Xie, Benard Karanja, Liwang Liu
Software Mentions: 1
Published: about 9 years ago

10.21307/jofnem-2020-084

Molecular characterization of the Pratylenchus vulnus populations on cereals in Turkey
Cited by: 0
Author(s): Mehmet Karaca, Elif Yavuzaslanoğlu, Gül Imriz, Özlem Ateş Sönmezoğlu
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-11-607

Conserved and variable correlated mutations in the plant MADS protein network
Cited by: 2
Author(s): Aalt D. J. van Dijk, Roeland C. H. J. van Ham
Software Mentions: 1
Published: over 14 years ago

10.1673/031.010.11401

Construction and Application of an Electronic Spatiotemporal Expression Profile and Gene Ontology Analysis Platform Based on the EST Database of the Silkworm,Bombyx mori
Cited by: 4
Author(s): Li Gan, Wenyu Zhang, Yan-shan Niu, Lina Xu, Jian Xi, Ming-Ming Ji, Shiqiang Xu
Software Mentions: 1
Published: about 15 years ago

10.1673/031.007.1301

16thInternational Ecdysone Workshop: July 10–14, 2006, Ghent University, Belgium
Cited by: 3
Author(s): Organized by, Xavier Bellés, I. M. L. Billas, Peter Cherbas, Jean‐Paul Delbecque, Tarlochan S. Dhadialla, Haruchiko Fujiwara, Ronald J. Hill, Kiyoshi Hiruma, René Hermann, Kostas Iatrou, Jan Koolman, René Lafont, Jean‐Antoine Lepesant, Yoshiaki Nakagawa, Reddy Palli, Alexander S. Raikhel, Lynn M. Riddiford, Huw H. Rees, František Sehnal, Karl Slama, Guy Smagghe, Kluas-Dieter Spindler, C.G.H. Steel, Luc Swevers, Carl S. Thummel
Software Mentions: 1
Published: over 18 years ago

10.1093/jisesa/ieaa033

Characterization of an Ecdysteroid-Regulated 16 kDa Protein Gene in Chinese Oak Silkworm, Antheraea pernyi (Lepidoptera: Saturniidae)
Cited by: 2
Author(s): Miaomiao Chen, Liang Zhong, Chen Zhao, Fengcheng Wang, Wan-Jie Ji, Bo Zhang, Shu-Yu Liu, Yanping Liu, Xisheng Li
Software Mentions: 1
Published: about 5 years ago

10.1093/jisesa/ieab072

Reference Gene Selection for Analyzing the Transcription Patterns of Two Fatty Acyl-CoA Reductase Genes From Paracoccus marginatus (Hemiptera: Pseudococcidae)
Cited by: 2
Author(s): Xiao Liang, Qing Chen, Chunling Wu, Ying Liu, Zhiling Han, Mufeng Wu
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2021.679463

Control of the Rhizobia Nitrogen-Fixing Symbiosis by Common Bean MADS-Domain/AGL Transcription Factors
Cited by: 5
Author(s): Litzy Ayra, María del Rocío Reyero-Saavedra, Mariel C Isidra-Arellano, Luis Lozano, Mario Ramı́rez, Alfonso Leija, Sara-Isabel Fuentes, Lourdes Girard, Oswaldo Valdés‐López, Georgina Hernández
Software Mentions: 1
Published: about 4 years ago

10.1673/031.011.13401

Mining and Characterization of Sequence Tagged Microsatellites from the Brown PlanthopperNilaparvata lugens
Cited by: 15
Author(s): Jing‐Tao Sun, Yankai Zhang, Ge Cheng, Xia Hong
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-11-S4-S9

In vitro homology search array comprehensively reveals highly conserved genes and their functional characteristics in non-sequenced species
Cited by: 2
Author(s): Atsushi Ogura, Masa‐aki Yoshida, Mutsumi Fukuzaki, Jun Sese
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2164-10-637

Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development
Cited by: 62
Author(s): William Ka Fai Tse, Birgit Eisenhaber, Soo Yei Ho, Qimei Ng, Frank Eisenhaber, Yun-Jin Jiang
Software Mentions: 1
Published: over 15 years ago

10.1007/s13205-016-0405-y

In silico characterization and differential expression pattern analysis of conserved HMG CoA reductase domain isolated from Aconitum balfourii Stapf
Cited by: 1
Author(s): Eti Sharma, Saurabh Pandey, Anupama Gaur
Software Mentions: 1
Published: over 9 years ago

10.1099/jmm.0.000622

Genome sequence analysis of emm89 Streptococcus pyogenes strains causing infections in Scotland, 2010–2016
Cited by: 16
Author(s): Stephen B. Beres, Randall J. Olsen, Matthew Ojeda Saavedra, Roisin Ure, Arlene Reynolds, Diane Lindsay, Andrew Smith, James M. Musser
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2016.00737

A SNARE-Like Superfamily Protein SbSLSP from the Halophyte Salicornia brachiata Confers Salt and Drought Tolerance by Maintaining Membrane Stability, K+/Na+ Ratio, and Antioxidant Machinery
Cited by: 24
Author(s): Dinkar Singh, Narendra Singh Yadav, Vivekanand Tiwari, Pradeep K. Agarwal, Bhavanath Jha
Software Mentions: 1
Published: about 9 years ago

10.3389/fpls.2016.00384

Changes in Transcript Related to Osmosis and Intracellular Ion Homeostasis in Paulownia tomentosa under Salt Stress
Cited by: 15
Author(s): Guoqiang Fan, Limin Wang, Mei Deng, Zhao Zhong, Yanpeng Dong, Xiaoshen Zhang, Yongsheng Li
Software Mentions: 1
Published: over 9 years ago

10.3389/fpls.2016.00339

Genome-Wide Transcriptional Excavation of Dipsacus asperoides Unmasked both Cryptic Asperosaponin Biosynthetic Genes and SSR Markers
Cited by: 5
Author(s): Jianying Wang, Yanli Li, Mei-Rong Hai, Junwen Chen, Zheng-jie Gao, Qianqian Hu, Guanghui Zhang, Shengchao Yang
Software Mentions: 1
Published: over 9 years ago

10.3389/fpls.2021.670216

Acetic Acid-Producing Endophyte Lysinibacillus fusiformis Orchestrates Jasmonic Acid Signaling and Contributes to Repression of Cadmium Uptake in Tomato Plants
Cited by: 4
Author(s): Lin Zhu, Jiansheng Guo, Yuxuan Sun, Songhua Wang, Cheng Zhou
Software Mentions: 1
Published: about 4 years ago

10.1186/s12864-020-06942-y

Polyploidization and pseudogenization in allotetraploid frog Xenopus laevis promote the evolution of aquaporin family in higher vertebrates
Cited by: 4
Author(s): Yanglei Jia, Xiao Liu
Software Mentions: 1
Published: almost 5 years ago

10.1099/jmm.0.001001

Sequence similarity searches for morphine biosynthesis enzymes in bacteria yield putative targets for understanding associations between infection and opiate administration
Cited by: 2
Author(s): Shing Hei Zhan, Leon French
Software Mentions: 1
Published: about 6 years ago

10.3389/fpls.2016.00265

Cry1Ac Transgenic Sugarcane Does Not Affect the Diversity of Microbial Communities and Has No Significant Effect on Enzyme Activities in Rhizosphere Soil within One Crop Season
Cited by: 19
Author(s): Dinggang Zhou, Liping Xu, Shaopei Gao, Jinlong Guo, Jun Luo, Qi You, Youxiong Que
Software Mentions: 1
Published: over 9 years ago

10.3389/fpls.2017.01973

Marker Development for Phylogenomics: The Case of Orobanchaceae, a Plant Family with Contrasting Nutritional Modes
Cited by: 2
Author(s): Xi Li, Baohai Hao, Da Pan, Gerald M. Schneeweiss
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2016.00728

Subcellular Localization of Galloylated Catechins in Tea Plants [Camellia sinensis (L.) O. Kuntze] Assessed via Immunohistochemistry
Cited by: 15
Author(s): Huanhuan Xu, Wang Ya, Yana Chen, Pan Zhang, Yi Zhao, Yewei Huang, Xuanjun Wang, Jun Sheng
Software Mentions: 1
Published: about 9 years ago

10.3389/fpls.2020.620922

A High-Density Genetic Linkage Map of SLAFs and QTL Analysis of Grain Size and Weight in Barley (Hordeum vulgare L.)
Cited by: 9
Author(s): Yunxia Fang, Xiaoqin Zhang, Xian Zhang, Tao Tong, Ziling Zhang, Gengwei Wu, Linlin Hou, Jiong Zheng, Chunyu Niu, Jia Li, Wenjia Wang, Hua Wang, Dawei Xue
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2014.00217

Genetic architecture of main effect QTL for heading date in European winter wheat
Cited by: 78
Author(s): C. Zanke, Jie Ling, Jörg Plieske, Sonja Kollers, Erhard Ebmeyer, Viktor Korzun, O. Argillier, Gunther Stiewe, Maike Hinze, Sebastian Beier, Martin W. Ganal, Marion S. Röder
Software Mentions: 1
Published: about 11 years ago

10.1186/s12864-017-3839-7

100 million years of multigene family evolution: origin and evolution of the avian MHC class IIB
Cited by: 24
Author(s): Julien Goebel, Marta Promerová, Francesco Bonadonna, Karen D. McCoy, Céline Serbielle, Maria Strandh, Glenn Yannic, Reto Burri, Luca Fumagalli
Software Mentions: 1
Published: about 8 years ago

10.1099/jmm.0.001329

Immunomodulatory streptococci that inhibit CXCL8 secretion and NFκB activation are common members of the oral microbiota
Cited by: 3
Author(s): Sarah L. Myers, Thuy Do, Josephine L. Meade, Aradhna Tugnait, Jon J Vernon, Jelena Pistolic, Robert E. W. Hancock, Philip Marsh, Harsh M. Trivedi, Dandan Chen, Deirdre DeVine
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2016.01303

Regulatory Cross-Talks and Cascades in Rice Hormone Biosynthesis Pathways Contribute to Stress Signaling
Cited by: 22
Author(s): Arindam Deb, Rumdeep K Grewal, Sudip Kundu
Software Mentions: 1
Published: almost 9 years ago

10.1099/jmm.0.001351

Whole genome sequencing of a clinical drug resistant Candida albicans isolate reveals known and novel mutations in genes involved in resistance acquisition mechanisms
Cited by: 5
Author(s): Roy A. Khalaf, Nour Fattouh, Matej Medvecký, Jaroslav Hrabák
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2018.00737

Salinity Tolerance of Two Potato Cultivars (Solanum tuberosum) Correlates With Differences in Vacuolar Transport Activity
Cited by: 20
Author(s): Rinse Jaarsma, Albertus H. de Boer
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-12-114

Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective
Cited by: 54
Author(s): François Thiaucourt, Lucía Manso-Silván, Salah Woubit, Valérie Barbe, Benoît Vacherie, Daniel Jacob, Michelyne Breton, Virginie Dupuy, Anne Marie Lomenech, Alain Blanchard, Pascal Sirand‐Pugnet
Software Mentions: 1
Published: over 14 years ago

10.1099/jmm.0.000474

Carriage of extended-spectrum beta-lactamase-producing Enterobacteriaceae in HIV-infected children in Zimbabwe
Cited by: 20
Author(s): Stephanie Wilmore, K Kranzer, Andrea Williams, Beauty Makamure, Agness Farai Nhidza, Justin Mayini, Tsitsi Bandason, John Metcalfe, Mark P. Nicol, Indran Balakrishnan, Matthew J. Ellington, Neil Woodford, Susan Hopkins, Timothy D. McHugh, RA Ferrand
Software Mentions: 1
Published: about 8 years ago

10.1099/jmm.0.000546

Novel adenoviruses detected in British mustelids, including a unique Aviadenovirus in the tissues of pine martens (Martes martes)
Cited by: 10
Author(s): David H. Walker, William F. Gregory, Dylan Turnbull, Mara Rocchi, Anna Meredith, Adrian Philbey, Colin Sharp
Software Mentions: 1
Published: almost 8 years ago

10.1099/jmm.0.000765

Molecular characterization of serogroup 19 Streptococcus pneumoniae in the Czech Republic in the post-vaccine era
Cited by: 8
Author(s): Helena Žemličková, Lucia Mališová, Petra Španělová, Vladislav Jakubů, Jana Kozáková, Martin Musílek, Matej Medvecký
Software Mentions: 1
Published: about 7 years ago

10.3389/fpls.2015.00239

Characterization of a stearoyl-acyl carrier protein desaturase gene family from chocolate tree, Theobroma cacao L
Cited by: 38
Author(s): Yufan Zhang, Siela N. Maximova, Mark J. Guiltinan
Software Mentions: 1
Published: over 10 years ago

10.3389/fpls.2021.664519

Exogenous Methyl Jasmonate Improves Heat Tolerance of Perennial Ryegrass Through Alteration of Osmotic Adjustment, Antioxidant Defense, and Expression of Jasmonic Acid-Responsive Genes
Cited by: 33
Author(s): Yanning Su, Yizhi Huang, Xintan Dong, Ruijia Wang, Mingyu Tang, Jiabang Cai, Jiayi Chen, Xinquan Zhang, Gang Nie
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2017.00200

RNA Interference (RNAi) as a Potential Tool for Control of Mycotoxin Contamination in Crop Plants: Concepts and Considerations
Cited by: 77
Author(s): Rajtilak Majumdar, Kanniah Rajasekaran, Jeffrey W. Cary
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2018.01285

Systematic Analysis of Cotton Non-specific Lipid Transfer Protein Family Revealed a Special Group That Is Involved in Fiber Elongation
Cited by: 18
Author(s): Chengsheng Meng, Yuanyuan Yan, Zhengwen Liu, Liting Chen, Yan Zhang, Xiuxin Li, Liqiang Wu, Guiyin Zhang, Xingfen Wang, Zhiying Ma
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2017.00381

New Insights on Leucine-Rich Repeats Receptor-Like Kinase Orthologous Relationships in Angiosperms
Cited by: 37
Author(s): Jean François Dufayard, Mathilde Bettembourg, Iris Fischer, Gaëtan Droc, Emmanuel Guiderdoni, Christophe Périn, Nathalie Chantret, Anne Diévart
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2017.00503

Expression Profiling Coupled with In-silico Mapping Identifies Candidate Genes for Reducing Aflatoxin Accumulation in Maize
Cited by: 11
Author(s): Ramesh Dhakal, Chao Chai, Ratna Karan, Gary L. Windham, W. Paul Williams, Prasanta K. Subudhi
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2164-14-167

A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly
Cited by: 81
Author(s): Warren R. Francis, Lynne M. Christianson, Rainer Kiko, Meghan L. Powers, Nathan C. Shaner, Steven H. D. Haddock
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-11-457

A new family of phosphoinositide phosphatases in microorganisms: identification and biochemical analysis
Cited by: 23
Author(s): Nicola J. Beresford, Charis R Saville, Hayley Bennett, Ian S. Roberts, Lydia Tabernero
Software Mentions: 1
Published: almost 15 years ago

10.1007/s00239-021-10015-3

Genome Scan for Variable Genes Involved in Environmental Adaptations of Nubian Ibex
Cited by: 0
Author(s): Vivien J Chebii, Emmanuel Mpolya, Samuel O. Oyola, Antoinette Kotzé, Jean-Baka Domelevo Entfellner, J. Musembi Mutuku
Software Mentions: 1
Published: about 4 years ago

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