pypi: blast | Projects | Ecosyste.ms: Papers

10.7554/eLife.04106

Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages
Cited by: 113
Author(s): Florence Caro, Vida Ahyong, Miguel Betegon, Joseph L. DeRisi
Software Mentions: 1
Published: over 10 years ago

10.1186/s13568-021-01290-w

Whole genome sequencing of Enterobacter mori, an emerging pathogen of kiwifruit and the potential genetic adaptation to pathogenic lifestyle
Cited by: 3
Author(s): Mingyang Zhang, Yilin Zhang, Xue Han, Juan Wang, Yang Yu, Baiping Ren, Mian Xia, Gang Li, Rongxiang Fang, Hang He, Yantao Jia
Software Mentions: 1
Published: almost 4 years ago

10.1186/s13015-016-0063-y

The paralog-to-contig assignment problem: high quality gene models from fragmented assemblies
Cited by: 14
Author(s): Henrike Indrischek, Nicolas Wieseke, Peter F. Stadler, Sonja J. Prohaska
Software Mentions: 1
Published: over 9 years ago

10.1111/acel.12686

In vivo properties of the disaggregase function of J‐proteins and Hsc70 in Caenorhabditis elegans stress and aging
Cited by: 42
Author(s): Janine Kirstein, Kristin Arnsburg, Annika Scior, Anna Szlachcic, D. Lys Guilbride, Richard I. Morimoto, Bernd Bukau, Nadinath B. Nillegoda
Software Mentions: 1
Published: almost 8 years ago

10.3390/genes10020121

The Singularity of Cetacea Behavior Parallels the Complete Inactivation of Melatonin Gene Modules
Cited by: 19
Author(s): Mónica Lopes-Marques, Raquel Ruivo, Luís Q. Alves, Nélson Sousa, André M. Machado, L. Filipe C. Castro
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.00171

Elba, a novel developmentally regulated chromatin boundary factor is a hetero-tripartite DNA binding complex
Cited by: 44
Author(s): Tsutomu Aoki, Ali Sarkeshik, John R. Yates, Paul Schedl
Software Mentions: 1
Published: over 12 years ago

10.3390/genes10050394

Three New Integration Vectors and Fluorescent Proteins for Use in the Opportunistic Human Pathogen Streptococcus pneumoniae
Cited by: 27
Author(s): Lance E. Keller, Anne-Stéphanie Rueff, Jun Kurushima, Jan‐Willem Veening
Software Mentions: 1
Published: about 6 years ago

10.3390/genes11030322

Identification of Genic SSRs Provide a Perspective for Studying Environmental Adaptation in the Endemic Shrub Tetraena mongolica
Cited by: 4
Author(s): Zhenhua Dang, Lei Huang, Yuanyuan Jia, Peter J. Lockhart, Yang Fong, Yunyun Tian
Software Mentions: 1
Published: over 5 years ago

10.1186/s12876-021-01911-5

Mutation analysis of the ATP7B gene and genotype–phenotype correlation in Chinese patients with Wilson disease
Cited by: 4
Author(s): Mingming Li, Jing Ma, Wenlong Wang, Xu Yang, Kaizhong Luo
Software Mentions: 1
Published: almost 4 years ago

10.1186/1471-2148-10-276

An efficient method to find potentially universal population genetic markers, applied to metazoans
Cited by: 37
Author(s): Anne Chenuil, Thierry B. Hoareau, Émilie Egea, Gwilherm Penant, Caroline Rocher, Didier Aurelle, Kenza Mokhtar-Jamaï, John D. D. Bishop, Émilie Boissin, A Mendoza Diaz, Manuela Krakau, Pieternella C. Luttikhuizen, Francesco Paolo Patti, Nicolas Blavet, Sylvain Mousset
Software Mentions: 1
Published: over 15 years ago

10.3390/genes11070727

Assigning the Sex-Specific Markers via Genotyping-by-Sequencing onto the Y Chromosome for a Torrent Frog Amolops mantzorum
Cited by: 7
Author(s): Wei Luo, Yun Xia, Bisong Yue, Xiaomao Zeng
Software Mentions: 1
Published: about 5 years ago

10.1186/1471-2148-7-177

Evolution of two distinct phylogenetic lineages of the emerging human pathogen Mycobacterium ulcerans
Cited by: 83
Author(s): Michael Käser, Simona Rondini, Naegeli Martin, Timothy P. Stinear, Françoise Portaels, Ulrich Certa, Gerd Pluschke
Software Mentions: 1
Published: over 18 years ago

10.1186/s12862-015-0441-y

The evolutionary dynamics of tRNA-gene copy number and codon-use in E. coli.
Cited by: 25
Author(s): Michael J. McDonald, Chih‐Hung Chou, Krishna B S Swamy, Hsien Da Huang, Jun‐Yi Leu
Software Mentions: 1
Published: almost 10 years ago

10.3390/genes12030348

miRNAture—Computational Detection of microRNA Candidates
Cited by: 3
Author(s): Cristian A. Velandia-Huerto, Jörg Fallmann, Peter F. Stadler
Software Mentions: 1
Published: over 4 years ago

10.15171/apb.2018.052

Simulation and Stability Assessment of Anti-EpCAM Immunotoxin for Cancer Therapy
Cited by: 3
Author(s): Seyed Ali Hosseinian, Aliakbar Haddad-Mashadrizeh, Samaneh Dolatabadi
Software Mentions: 1
Published: almost 7 years ago

10.1038/srep45188

Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker)
Cited by: 24
Author(s): Yun Duan, Zhong-Jun Gong, Wu RenHai, Miao Jin, Yi Jiang, Tong Li, Xiaobo Wu, Yuqing Wu
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.50292

Micronuclei-based model system reveals functional consequences of chromothripsis in human cells
Cited by: 56
Author(s): Maja Kneissig, Kristina Keuper, Mirjam S. de Pagter, Markus J. van Roosmalen, Jana Martin, Hannah Otto, Verena Passerini, Aline Campos Sparr, Ivo Renkens, Fenna Kropveld, Anand Vasudevan, Jason M. Sheltzer, Wigard P. Kloosterman, Zuzana Storchová
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-017-00067-1

Novel protein acetyltransferase, Rv2170, modulates carbon and energy metabolism in Mycobacterium tuberculosis
Cited by: 15
Author(s): Wonsik Lee, Brian C. VanderVen, Suzanne Walker, David G. Russell
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-01220-6

Transcriptome analysis on the exoskeleton formation in early developmetal stages and reconstruction scenario in growth-moulting in Litopenaeus vannamei
Cited by: 30
Author(s): Yi Gao, Jiankai Wei, Jianbo Yuan, Xiaojun Zhang, Fuhua Li, Jianhai Xiang
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-01383-2

Comparative transcriptome analysis of venom glands from Cotesia vestalis and Diadromus collaris, two endoparasitoids of the host Plutella xylostella
Cited by: 16
Author(s): Wei Zhao, Min Shi, Xi-qian Ye, Fĕi Li, Xiaowei Wang, Xue‐Xin Chen
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-01608-4

The mitochondrial genomes of the acoelomorph worms Paratomella rubra, Isodiametra pulchra and Archaphanostoma ylvae
Cited by: 21
Author(s): Helen E. Robertson, François Lapraz, Bernhard Egger, Maximilian J. Telford, Philipp H. Schiffer
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.18318

Folded gastrulation and T48 drive the evolution of coordinated mesoderm internalization in flies
Cited by: 22
Author(s): Silvia Urbansky, Paula González Avalos, Maike Wosch, Steffen Lemke
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-03557-4

MatureP: prediction of secreted proteins with exclusive information from their mature regions
Cited by: 31
Author(s): Georgia Orfanoudaki, Maria Markaki, Katerina Chatzi, Ioannis Tsamardinos, Anastassios Economou
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-04094-w

Multiple introns in a deep-sea Annelid (Decemunciger: Ampharetidae) mitochondrial genome
Cited by: 18
Author(s): Ângelo F. Bernardino, Yuanning Li, Craig R. Smith, Kenneth M. Halanych
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-04879-z

Comparative transcriptome analysis on the synthesis pathway of honey bee (Apis mellifera) mandibular gland secretions
Cited by: 32
Author(s): Yuqi Wu, Huoqing Zheng, Miguel Corona, Christian Walter Werner Pirk, Fei Meng, Yi Zheng, Fuliang Hu
Software Mentions: 1
Published: about 8 years ago

10.1186/1471-2148-10-24

Signature proteins for the major clades of Cyanobacteria
Cited by: 71
Author(s): Radhey S. Gupta, Divya W Mathews
Software Mentions: 1
Published: over 15 years ago

10.1038/s41598-017-06806-8

Full-length cloning, sequence analysis and expression detection of the β-tubulin gene from the Chinese gall aphid (Schlechtendalia chinensis)
Cited by: 0
Author(s): Ping Liu, Zixiang Yang, Xiaoming Chen, Hang Chen
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-08362-7

Genomic regions and genes related to inter-population differences in body size in the ground beetle Carabus japonicus
Cited by: 4
Author(s): Ryohei Komurai, Tomochika Fujisawa, Yutaka Okuzaki, Teiji Sota
Software Mentions: 1
Published: almost 8 years ago

10.1186/s13568-014-0024-0

Characterization of newly isolated oleaginous yeasts - Cryptococcus podzolicus, Trichosporon porosum and Pichia segobiensis
Cited by: 65
Author(s): Ines Schulze, Silla Hansen, Steffen Großhans, Thomas Rudszuck, Katrin Ochsenreither, Christoph Syldatk, Anke Neumann
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-017-07740-5

Elucidation of the molecular responses to waterlogging in Sesbania cannabina roots by transcriptome profiling
Cited by: 26
Author(s): Changliang Ren, Kong Chen, Yan Ke, Hua Zhang, Yongming Luo, Zhihong Xie
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-017-10388-w

Multiple origins of endosymbionts in Chlorellaceae with no reductive effects on the plastid or mitochondrial genomes
Cited by: 14
Author(s): Weishu Fan, Wenhu Guo, James L. Van Etten, Jeffrey P. Mower
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijms130810154

The Opuntia streptacantha OpsHSP18 Gene Confers Salt and Osmotic Stress Tolerance in Arabidopsis thaliana
Cited by: 11
Author(s): S. Salas-Muñoz, Gracia Goméz‐Anduro, Pablo Delgado‐Sánchez, Margarita Rodríguez‐Kessler, Juan Francisco Jiménez-Bremont
Software Mentions: 1
Published: almost 13 years ago

10.3390/ijms14058985

Characteristic of the Pepper CaRGA2 Gene in Defense Responses against Phytophthora capsici Leonian
Cited by: 34
Author(s): Yingli Zhang, Qingli Jia, Dawei Li, Jun-E Wang, Yanxu Yin, Zhen-Hui Gong
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-017-12713-9

Transcriptome analysis of Spodoptera frugiperda Sf9 cells reveals putative apoptosis-related genes and a preliminary apoptosis mechanism induced by azadirachtin
Cited by: 23
Author(s): Benshui Shu, Jingjing Zhang, Sethuraman Veeran, Gaofeng Cui, Xin Yi, Guohua Zhong
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2148-10-341

Evolution of xyloglucan-related genes in green plants
Cited by: 66
Author(s): Luiz-Eduardo Del-Bem, Michel Vincentz
Software Mentions: 1
Published: over 15 years ago

10.1038/s41598-017-16435-w

Isolation and functional identification of three cuticle protein genes during metamorphosis of the beet armyworm, Spodoptera exigua
Cited by: 15
Author(s): Saad Jan, Sisi Liu, Muhammad Hafeez, Xiangmei Zhang, Farman Ullah Dawar, Jian Guo, Chao Gao, Mo Wang
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms141020204

OsPOP5, A Prolyl Oligopeptidase Family Gene from Rice Confers Abiotic Stress Tolerance in Escherichia coli
Cited by: 23
Author(s): Cun-Mei Tan, Rongjun Chen, Jianhua Zhang, Xiaoling Gao, Lihua Li, Pingrong Wang, Xiping Deng, Zhengjun Xu
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-017-17269-2

Quantitative trait loci mapping for feed conversion efficiency in crucian carp (Carassius auratus)
Cited by: 18
Author(s): Maolin Pang, Bishi Fu, Xin Yu, Haiyang Liu, Xinhua Wang, Zhan Yin, Shouqi Xie, Jingou Tong
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-17953-3

PiT2 regulates neuronal outgrowth through interaction with microtubule-associated protein 1B
Cited by: 11
Author(s): Xixiang Ma, Xiangyang Li, Ping Yi, Cheng Wang, Jun Weng, Li Zhang, Xuan Xu, Hao Sun, Shenglei Feng, Kai Li, Rui Chen, Shiyue Du, Xiao Mao, Xiaomei Zeng, Luo-Ying Zhang, Mugen Liu, Beisha Tang, Xuemei Zhu, Jin Shan, Jingyu Liu
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-18937-z

Human complement receptor type 1 (CR1) protein levels and genetic variants in chronic Chagas Disease
Cited by: 9
Author(s): Thaisa Lucas Sandri, Kárita Cláudia Freitas Lidani, Fabiana Antunes Andrade, Christian G. Meyer, Peter G. Kremsner, Iara José de Messias-Reason, Thirumalaisamy P. Velavan
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2148-9-205

Evolutionary dynamics of the LTR retrotransposons roo and rooA inferred from twelve complete Drosophila genomes
Cited by: 17
Author(s): Nicole de la Chaux, Andreas Wagner
Software Mentions: 1
Published: over 16 years ago

10.1186/1471-2148-4-24

Cited by: 39
Author(s): Emily E. Hare, Curtis M. Loer
Software Mentions: 1
Published: over 21 years ago

10.18632/oncotarget.7341

Rapid generation of novel models of RAG1 deficiency by CRISPR/Cas9-induced mutagenesis in murine zygotes
Cited by: 11
Author(s): Lisa Ott de Bruin, Wei Yang, Kelly Capuder, Yu Nee Lee, Maddalena Antolini, Robin M. Meyers, Martin Gellert, Kiran Musunuru, John P. Manis, Luigi D. Notarangelo
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms161226219

The Complete Mitochondrial Genome of Mindarus keteleerifoliae (Insecta: Hemiptera: Aphididae) and Comparison with Other Aphididae Insects
Cited by: 10
Author(s): Yuan Wang, Jing Chen, Li‐Yun Jiang, Ge‐Xia Qiao
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-21598-1

Transcriptome changes induced by abiotic stresses in Artemisia annua
Cited by: 30
Author(s): Divya Vashisth, Ritesh Kumar, Shantanu Rastogi, Vikas Patel, Alok Kalra, Madan M. Gupta, Anil Kumar Gupta, Ajit Kumar Shasany
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-21919-4

Genome sequencing and analysis of Alcaligenes faecalis subsp. phenolicus MB207
Cited by: 28
Author(s): Zarrin Basharat, Azra Yasmin, Tao He, Yigang Tong
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-22235-7

Identification, expression, and endocrine-disruption of three ecdysone-responsive genes in the sentinel species Gammarus fossarum
Cited by: 15
Author(s): Duarte Gouveia, François Bonneton, Christine Almunia, Jean Armengaud, H. Quéau, Davide Degli-Esposti, Olivier Geffard, Arnaud Chaumot
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2148-8-192

Adaptive evolution of SCML1 in primates, a gene involved in male reproduction
Cited by: 13
Author(s): Haihui Wu, Bing Su
Software Mentions: 1
Published: over 17 years ago

10.3390/ijms17060825

Cloning, Expression and 3D Structure Prediction of Chitinase from Chitinolyticbacter meiyuanensis SYBC-H1
Cited by: 9
Author(s): Zhikui Hao, Heng Wu, Meiling Yang, Jianjun Chen, Limin Xi, Weijie Zhao, Jialin Yu, Jiayang Liu, Xiangru Liao, Qingguo Huang
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-018-24674-8

Heterologous DNA prime-protein boost immunization with RecA and FliD offers cross-clade protection against leptospiral infection
Cited by: 12
Author(s): Raja Veerapandian, Sankaran Sobana, Charles Solomon Akino Mercy, Bianca Cotto, Durlav Prasad Bora, Kalimuthusamy Natarajaseenivasan
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.7762

A new immunization and treatment strategy for mouse mammary tumor virus (MMTV) associated cancers
Cited by: 16
Author(s): Ori Braitbard, Maayan Roniger, Allan Bar-Sinai, Dana Rajchman, Tamar Gross, Hillel Abramovitch, Marco La Ferla, Sara Franceschi, Francesca Lessi, Antonio Giuseppe Naccarato, Chiara Maria Mazzanti, Generoso Bevilacqua, Jacob Hochman
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-25071-x

Whole genome sequencing in the search for genes associated with the control of SIV infection in the Mauritian macaque model
Cited by: 4
Author(s): Marc de Manuel, Takashi Shiina, Shingo Suzuki, Nathalie Dereuddre‐Bosquet, Henri‐Jean Garchon, Masayuki Tanaka, Nicolas Congy-Jolivet, Alice Aarnink, Roger Le Grand, Tomàs Marquès‐Bonet, Antoine Blancher
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-24481-1

Screen and Verification for Transgene Integration Sites in Pigs
Cited by: 9
Author(s): Linglei Ma, Yuzhe Wang, Haitao Wang, Yiqing Hu, Jingyao Chen, Tan Tan, Man Hu, Xiaojuan Liu, Ran Zhang, Yiming Xing, Yaofeng Zhao, Xiaoxiang Hu, Ning Li
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-26071-7

Indoor wet cells as a habitat for melanized fungi, opportunistic pathogens on humans and other vertebrates
Cited by: 13
Author(s): Xiaofang Wang, Wenying Cai, A. H. G. Gerrits van den Ende, Junmin Zhang, Ting Xie, Liyan Xi, Xiqing Li, Jiufeng Sun, Sybren de Hoog
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2148-12-183

Comparative genomics of eukaryotic small nucleolar RNAs reveals deep evolutionary ancestry amidst ongoing intragenomic mobility
Cited by: 32
Author(s): Marc P. Hoeppner, Anthony M. Poole
Software Mentions: 1
Published: over 13 years ago

10.1038/s41598-018-32234-3

Diminished TLR2-TLR9 mediated CD4+ T cell responses are associated with increased inflammation in intraocular tuberculosis
Cited by: 8
Author(s): Ravi Sharma, Jyoti Sharma, Zafar K. Khan, Ajinkya Pattekar, Vishali Gupta, Reema Bansal, Kusum Sharma, Ashutosh N. Aggarwal, Amod Gupta, Naresh Sachdeva
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-34774-0

Ongoing human chromosome end extension revealed by analysis of BioNano and nanopore data
Cited by: 1
Author(s): Haojing Shao, Chenxi Zhou, Minh Duc Cao, Lachlan Coin
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-35304-8

Transcriptome analysis provides insight into prickle development and its link to defense and secondary metabolism in Solanum viarum Dunal
Cited by: 28
Author(s): Shatrujeet Pandey, Ridhi Goel, Anu Bhardwaj, Mehar Hasan Asif, Samir V. Sawant, Pratibha Misra
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-35996-y

iTRAQ-based quantitative tissue proteomic analysis of differentially expressed proteins (DEPs) in non-transgenic and transgenic soybean seeds
Cited by: 41
Author(s): Weixiao Liu, Wentao Xu, Li Liang, Meng‐Jie Dong, Yusong Wan, Xiaoyun He, Huang KunLun, Wujun Jin
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-36209-2

Miniscule differences between sex chromosomes in the giant genome of a salamander
Cited by: 23
Author(s): Melissa C. Keinath, Nataliya Timoshevskaya, Vladimir A. Timoshevskiy, S. Randal Voss, Jeramiah J. Smith
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-36211-8

Modulation of benzylisoquinoline alkaloid biosynthesis by overexpression berberine bridge enzyme in Macleaya cordata
Cited by: 12
Author(s): Peng Huang, Wei Liu, Min Xu, Ruolan Jiang, Liqiong Xia, Peng Wang, Han Li, Zhaoyang Tang, Qiyin Zheng, Jianguo Zeng
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-36573-z

Hidden mycota of pine needles: Molecular signatures from PCR-DGGE and Ribosomal DNA phylogenetic characterization of novel phylotypes
Cited by: 14
Author(s): Rajesh Jeewon, Quin S. Y. Yeung, Dhanushka N. Wannasinghe, Sillma Rampadarath, Daneshwar Puchooa, Hongkai Wang, Kevin D. Hyde
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-35983-3

SOX2 participates in spermatogenesis of Zhikong scallop Chlamys farreri
Cited by: 15
Author(s): Suzhe Liang, Danwen Liu, Xixi Li, Maokai Wei, Xiaobin Yu, Li Qi, Huixin Ma, Zhifeng Zhang, Zhenkui Qin
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-38733-1

Plasmid DNA contaminant in molecular reagents
Cited by: 20
Author(s): N. Wally, Martina Schneider, Jakob Thannesberger, Marie-Theres Kastner, Tamás Bakonyi, Stanislav Indik, Thomas Rattei, Janis R. Bedarf, Falk Hildebrand, John Lok Man Law, Juan Jovel, Christoph Steininger
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2148-7-43

Tic62: a protein family from metabolism to protein translocation
Cited by: 53
Author(s): Mónica Balsera, Anna Stengel, Jürgen Soll, Bettina Bölter
Software Mentions: 1
Published: over 18 years ago

10.1186/1471-2148-11-356

Pathogen-origin horizontally transferred genes contribute to the evolution of Lepidopteran insects
Cited by: 38
Author(s): Zi-Wen Li, Yi Hong Shen, Zhong Huai Xiang, Ze Zhang
Software Mentions: 1
Published: over 13 years ago

10.1186/s12862-015-0286-4

Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae
Cited by: 47
Author(s): Heather M. Hunsperger, Tejinder S. Randhawa, Rose Ann Cattolico
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-019-41936-1

Genomic insights into HSFs as candidate genes for high-temperature stress adaptation and gene editing with minimal off-target effects in flax
Cited by: 17
Author(s): Dipnarayan Saha, Pinaki Mukherjee, Sourav Dutta, Kanti Meena, S. K. Sarkar, Asit Baran Mandal, Tapash Dasgupta, Jiban Mitra
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2148-7-150

Thyroid hormone receptor orthologues from invertebrate species with emphasis on Schistosoma mansoni
Cited by: 60
Author(s): Wenjie Wu, Edward G. Niles, Philip T. LoVerde
Software Mentions: 1
Published: almost 18 years ago

10.1186/s12862-015-0301-9

The alveolate translation initiation factor 4E family reveals a custom toolkit for translational control in core dinoflagellates
Cited by: 17
Author(s): Grant D Jones, Ernest Williams, Allen R. Place, Rosemary Jagus, Tsvetan R. Bachvaroff
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-019-43235-1

Thymosin β-4 is a novel regulator for primary cilium formation by nephronophthisis 3 in HeLa human cervical cancer cells
Cited by: 14
Author(s): Jae‐Wook Lee, Hong Sug Kim, Eun‐Yi Moon
Software Mentions: 1
Published: about 6 years ago

10.1002/cam4.1565

A distinctively expressed long noncoding <scp>RNA</scp> , <scp>RP</scp> 11‐466I1.1, may serve as a prognostic biomarker in hepatocellular carcinoma
Cited by: 9
Author(s): Junyong Zhang, Di Zhang, Qi Zhao, Jianni Qi, Li Xiao, Chengyong Qin
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-43396-z

Proteomic and structural differences in lumpfish skin among the dorsal, caudal and ventral regions
Cited by: 7
Author(s): Deepti Manjari Patel, Katarína Bhide, Mangesh Bhide, Martin Haugmo Iversen, Monica F. Brinchmann
Software Mentions: 1
Published: about 6 years ago

10.3390/life5010905

The Expansion of Animal MicroRNA Families Revisited
Cited by: 40
Author(s): Jana Hertel, Peter F. Stadler
Software Mentions: 1
Published: over 10 years ago

10.1186/s12936-017-1976-8

A new method for sequencing the hypervariable Plasmodium falciparum gene var2csa from clinical samples
Cited by: 13
Author(s): Antoine Dara, Mark A. Travassos, Matthew Adams, Sarah Schaffer DeRoo, Elliott F. Drábek, Sonia Agrawal, Miriam K. Laufer, Christopher V. Plowe, Joana C. Silva
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12936-018-2188-6

Drug resistance genes: pvcrt-o and pvmdr-1 polymorphism in patients from malaria endemic South Western Coastal Region of India
Cited by: 17
Author(s): Shiny Joy, Benudhar Mukhi, Susanta Kumar Ghosh, Rajeshwara N. Achur, D. Channe Gowda, Namita Surolia
Software Mentions: 1
Published: over 7 years ago

10.1186/s12936-018-2316-3

Presence of novel triple mutations in the pvdhfr from Plasmodium vivax in Mangaluru city area in the southwestern coastal region of India
Cited by: 9
Author(s): Shiny Joy, Susanta Kumar Ghosh, Rajeshwara N. Achur, D. Channe Gowda, Namita Surolia
Software Mentions: 1
Published: over 7 years ago

10.1186/1475-2875-8-69

A systematic classification of Plasmodium falciparum P-loop NTPases: structural and functional correlation
Cited by: 12
Author(s): Deepti Gangwar, Mridul Kalita, Dinesh Gupta, Virander S. Chauhan, Asif Mohmmed
Software Mentions: 1
Published: over 16 years ago

10.1007/s10126-021-10042-7

Development and Interrogation of a Transcriptomic Resource for the Giant Triton Snail (Charonia tritonis)
Cited by: 6
Author(s): Anne Klein, Cherie A. Motti, Adam K. Hillberg, Tomer Ventura, Peter Thomas‐Hall, Thomas R. Armstrong, Thomas H. Barker, Paul Whatmore, Scott F. Cummins
Software Mentions: 1
Published: about 4 years ago

10.3390/md17050275

Widespread Existence of Quorum Sensing Inhibitors in Marine Bacteria: Potential Drugs to Combat Pathogens with Novel Strategies
Cited by: 27
Author(s): Jingjing Zhao, Xinyun Li, Xiyan Hou, Chunshan Quan, Ming Chen
Software Mentions: 1
Published: about 6 years ago

10.3390/md18020102

A Truncated Galectin-3 Isolated from Skin Mucus of Atlantic Salmon Salmo salar Binds to and Modulates the Proteome of the Gram-Negative Bacteria Moritella viscosa
Cited by: 9
Author(s): Deepti Manjari Patel, Yoichiro Kitani, Kjetil Korsnes, Martin Haugmo Iversen, Monica F. Brinchmann
Software Mentions: 1
Published: over 5 years ago

10.1186/1999-3110-54-58

De novo transcriptome assembly and novel microsatellite marker information in Capsicum annuum varieties Saengryeg 211 and Saengryeg 213
Cited by: 9
Author(s): Yul-Kyun Ahn, Swati Tripathi, Young-Il Cho, Jeong-Ho Kim, Hye-Eun Lee, Do-Sun Kim, Jong-Gyu Woo, Myeong-Cheoul Cho
Software Mentions: 1
Published: over 11 years ago

10.3390/md18090460

Marine Fungus Aspergillus chevalieri TM2-S6 Extract Protects Skin Fibroblasts from Oxidative Stress
Cited by: 14
Author(s): Sophia Letsiou, Artemis Bakea, Géraldine Le Goff, Philippe Lopes, Κonstantinos Gardikis, Michal Weis, Yehuda Benayahu, Jamal Ouazzani
Software Mentions: 1
Published: almost 5 years ago

10.1186/1471-2148-8-110

The genome of the brown alga Ectocarpus siliculosus contains a series of viral DNA pieces, suggesting an ancient association with large dsDNA viruses
Cited by: 44
Author(s): Nicolas Delaroque, Wilhelm Boland
Software Mentions: 1
Published: over 17 years ago

10.3390/md16010030

Characterization of a Novel Alginate Lyase from Marine Bacterium Vibrio furnissii H1
Cited by: 28
Author(s): Xiaoyan Zhu, Xiangqian Li, Hao Shi, Jia Zhou, Zhiyong Tan, Mengdi Yuan, Ping Yao, Xiaoyan Liu
Software Mentions: 1
Published: over 7 years ago

10.1038/s41413-020-0098-z

A variant in IL6ST with a selective IL-11 signaling defect in human and mouse
Cited by: 16
Author(s): Tobias Schwerd, Freia Krause, Twigg Srf., Dominik Aschenbrenner, Y-H. Chen, Uwe Borgmeyer, Miryam Müller, Santiago Manrique, Neele Schumacher, Steven A. Wall, Jonathan Jung, Timo Damm, Glüer C-C., Jürgen Scheller, Stefan Rose‐John, Elizabeth Jones, Arian Laurence, Wilkie Aom., Dirk Schmidt-Arras, Holm H. Uhlig
Software Mentions: 1
Published: about 5 years ago

10.3390/md13020879

New Insights on the Terpenome of the Red Seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta)
Cited by: 31
Author(s): Louisi Souza de Oliveira, Diogo A. Tschoeke, Aline Lourenço de Oliveira, Lilian Jorge Hill, Wladimir Costa Paradas, Leonardo T. Salgado, Cristiane C. Thompson, Renato Crespo Pereira, Fabiano L. Thompson
Software Mentions: 1
Published: over 10 years ago

10.3390/md10102280

Assessment of the Bacteriocinogenic Potential of Marine Bacteria Reveals Lichenicidin Production by Seaweed-Derived Bacillus spp.
Cited by: 38
Author(s): Maria Luz Prieto, L. O’Sullivan, Shiau Pin Tan, Peter McLoughlin, Helen Hughes, Paula M. O’Connor, Paul D. Cotter, Peadar G. Lawlor, Gillian E. Gardiner
Software Mentions: 1
Published: almost 13 years ago

10.3390/ma14061372

Impact of the Diet on the Formation of Oxidative Stress and Inflammation Induced by Bacterial Biofilm in the Oral Cavity
Cited by: 7
Author(s): Ilona Rowińska, Adrianna Szyperska-Ślaska, Piotr Zariczny, Robert Pasławski, Karol Kramkowski, Paweł Kowalczyk
Software Mentions: 1
Published: over 4 years ago

10.3390/medicina55050178

Peptide Mapping, In Silico and In Vivo Analysis of Allergenic Sorghum Profilin Peptides
Cited by: 2
Author(s): Chandra Sekhar Bokka, Ganesh Kumar Veeramachaneni, V B S C Thunuguntla, Janakiram Bobbillapati, Jayakumar Singh Bondili
Software Mentions: 1
Published: about 6 years ago

10.1590/0074-02760170182

Dengue serotype-specific immune response in Aedes aegypti and Aedes albopictus
Cited by: 24
Author(s): Chelsea T. Smartt, Dong Ho Shin, Barry W. Alto
Software Mentions: 1
Published: over 7 years ago

10.1111/j.1751-7915.2012.00357.x

Arbuscular mycorrhizal fungi in a wetland constructed for benzene-, methyltert-butyl ether- and ammonia-contaminated groundwater bioremediation
Cited by: 53
Author(s): Thomas Fester
Software Mentions: 1
Published: almost 13 years ago

10.1016/j.btre.2020.e00551

Purification and characterization of a noble thermostable algal starch liquefying alpha-amylase from Aeribacillus pallidus BTPS-2 isolated from geothermal spring of Nepal
Cited by: 6
Author(s): Parash Mani Timilsina, Gyanu Raj Pandey, Asmita Shrestha, Manish Ojha, Tika Bahadur Karki
Software Mentions: 1
Published: over 4 years ago

10.1111/1751-7915.12315

Experimental validation of in silico model‐predicted isocitrate dehydrogenase and phosphomannose isomerase from D ehalococcoides mccartyi
Cited by: 1
Author(s): Mahmudul Islam, Anatoli Tchigvintsev, V. Yim, Alexei Savchenko, Alexander F. Yakunin, Radhakrishnan Mahadevan, Elizabeth A. Edwards
Software Mentions: 1
Published: almost 10 years ago

10.1080/13102818.2014.906826

NewPaenibacillus larvaebacterial isolates from honey bee colonies infected with American foulbrood disease in Egypt
Cited by: 11
Author(s): Saad Masry, Sanaa S. A. Kabeil, Elsayed E. Hafez
Software Mentions: 1
Published: over 11 years ago

10.1186/s13068-018-1308-4

Draft genome sequence and detailed characterization of biofuel production by oleaginous microalga Scenedesmus quadricauda LWG002611
Cited by: 15
Author(s): Chitralekha Nag Dasgupta, Sanjeeva Nayaka, Kiran Toppo, Atul Kumar Singh, Uday Deshpande, Amitabikram Mohapatra
Software Mentions: 1
Published: over 6 years ago

10.1186/s13068-019-1355-5

Comparative transcriptome analysis of a long-time span two-step culture process reveals a potential mechanism for astaxanthin and biomass hyper-accumulation in Haematococcus pluvialis JNU35
Cited by: 33
Author(s): Luodong Huang, Baoyan Gao, Minmin Wu, Feifei Wang, Chengwu Zhang
Software Mentions: 1
Published: over 6 years ago

10.1111/1751-7915.13308

Endophytic fungal community of Dysphania ambrosioides from two heavy metal-contaminated sites: evaluated by culture-dependent and culture-independent approaches
Cited by: 18
Author(s): Shobhika Parmar, Qiaohong Li, Ying Wu, Xinya Li, Jinping Yan, Vijay Kumar Sharma, Yunlin Wei, Haiyan Li
Software Mentions: 1
Published: almost 7 years ago

10.1111/1751-7915.12285

Recombinant pediocin in <scp>L</scp>actococcus lactis: increased production by propeptide fusion and improved potency by co‐production with <scp>PedC</scp>
Cited by: 10
Author(s): Alexandre Back, Frédéric Borges, Cécile Mangavel, Cédric Paris, Emmanuel Rondags, Romain Kapel, Arnaud Aymes, Hélène Rogniaux, Marija Pavlović, Auke J. van Heel, Oscar P. Kuipers, Anne-Marie Revol-Junelles, Catherine Cailliez‐Grimal
Software Mentions: 1
Published: about 10 years ago

10.1186/s13068-019-1606-5

Genomic analysis of Burkholderia sp. ISTR5 for biofunneling of lignin-derived compounds
Cited by: 40
Author(s): Raj Morya, Madan Kumar, Sanjai Singh, Indu Shekhar Thakur
Software Mentions: 1
Published: over 5 years ago

Projects: pypi: blast

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Papers Mentioning blast 1,819