10.3389/fmed.2021.737602

Whole Genome Sequencing of SARS-CoV-2 Strains in COVID-19 Patients From Djibouti Shows Novel Mutations and Clades Replacing Over Time
Cited by: 4
Author(s): Ikram Omar Osman, Anthony Levasseur, Ludivine Bréchard, Iman Abdillahi Hassan, Idil Salah Abdillahi, Zeinab Ali Waberi, Jérémy Delerce, Marielle Bedotto, Linda Houhamdi, Pierre‐Edouard Fournier, Philippe Colson, Mohamed Houmed Aboubaker, Didier Raoult, Christian Devaux
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-021-07551-z

RNA-Seq analysis of blood meal induced gene-expression changes in Aedes aegypti ovaries
Cited by: 7
Author(s): Dilip K. Nag, Constentin Dieme, Pascal Lapierre, Erica Lasek‐Nesselquist, Laura D. Kramer
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.00920

Distribution and Genetic Characteristics of SXT/R391 Integrative Conjugative Elements in Shewanella spp. From China
Cited by: 17
Author(s): Yujie Fang, Yonglu Wang, Zhenpeng Li, Zongdong Liu, Xinyue Li, Baowei Diao, Biao Kan, Duochun Wang
Software Mentions: 1
Published: over 8 years ago

10.1099/ijs.0.059600-0

Lactobacillus apinorum sp. nov., Lactobacillus mellifer sp. nov., Lactobacillus mellis sp. nov., Lactobacillus melliventris sp. nov., Lactobacillus kimbladii sp. nov., Lactobacillus helsingborgensis sp. nov. and Lactobacillus kullabergensis sp. nov., isolated from the honey stomach of the honeybee Apis mellifera
Cited by: 152
Author(s): Tobias Olofsson, Magnus Alsterfjord, Bo Nilson, E. I. Butler, Alejandra Vásquez
Software Mentions: 1
Published: about 12 years ago

10.1186/1471-2164-11-335

Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8
Cited by: 59
Author(s): Max Farnbacher, Thomas Jahns, Dirk Willrodt, Rolf Daniel, Rainer Haas, Alexander Goesmann, Stefan Kurtz, Gabriele Rieder
Software Mentions: 1
Published: over 16 years ago

10.3389/fmicb.2018.01313

Influence of the Potential Carbon Sources for Field Denitrification Beds on Their Microbial Diversity and the Fate of Carbon and Nitrate
Cited by: 22
Author(s): Victoria Grießmeier, Johannes Gescher
Software Mentions: 1
Published: over 8 years ago

10.1128/AEM.00282-16

Two Bacterial Genera, Sodalis and Rickettsia, Associated with the Seal Louse Proechinophthirus fluctus (Phthiraptera: Anoplura)
Cited by: 59
Author(s): Bret M. Boyd, Julie M. Allen, Ryuichi Koga, Takema Fukatsu, Andrew D. Sweet, Kevin P. Johnson, David L. Reed
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2018.02249

Sarconesin: Sarconesiopsis magellanica Blowfly Larval Excretions and Secretions With Antibacterial Properties
Cited by: 17
Author(s): Andrea Díaz-Roa, Manuel A. Patarroyo, Felio J. Bello, Pedro I. da Silva
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2018.02216

Genomic Characterization and Probiotic Potency of Bacillus sp. DU-106, a Highly Effective Producer of L-Lactic Acid Isolated From Fermented Yogurt
Cited by: 29
Author(s): Pan Li, Wenni Tian, Zhuo Jiang, Zuanhao Liang, Xueyin Wu, Bing Du
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2018.00603

The Road to Infection: Host-Microbe Interactions Defining the Pathogenicity of Streptococcus bovis/Streptococcus equinus Complex Members
Cited by: 48
Author(s): Christoph Jans, Annemarie Boleij
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2012.00327

Molecular signatures for the PVC clade (Planctomycetes, Verrucomicrobia, Chlamydiae, and Lentisphaerae) of bacteria provide insights into their evolutionary relationships
Cited by: 31
Author(s): Radhey S. Gupta, Vaibhav Bhandari, Hafiz Sohail Naushad
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12864-019-5937-1

Genome-wide characterization of SPL family in Medicago truncatula reveals the novel roles of miR156/SPL module in spiky pod development
Cited by: 17
Author(s): Hongfeng Wang, Zhichao Lu, Yiteng Xu, Lingcui Kong, Jiankui Shi, Yafei Liu, Chunxiang Fu, Xiaoshan Wang, Zeng‐Yu Wang, Chuanen Zhou, Li Han
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.608752

Functional and Genomic Characterization of Ligilactobacillus salivarius TUCO-L2 Isolated From Lama glama Milk: A Promising Immunobiotic Strain to Combat Infections
Cited by: 9
Author(s): Sandra Quilodrán-Vega, Leonardo Albarracín, Flavia I. Mansilla, Lorena Paola Arce, Bingwen Zhou, Aminul Islam, Mikado Tomokiyo, Imad Al Kassaa, Yoshihito Suda, Haruki Kitazawa, Julio Villena
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2016.00538

Identification and Characterization of a Cleavage Site in the Proteolysis of Orf Virus 086 Protein
Cited by: 3
Author(s): Xiaoping Wang, Bin Xiao, Jiafeng Zhang, Daxiang Chen, Wei Li, Ming Li, Wenbo Hao, Shuhong Luo
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2164-14-389

Skin transcriptome profiles associated with coat color in sheep
Cited by: 64
Author(s): Rong Fan, Jun Xie, Junming Bai, Haidong Wang, Tian Xue, Rui Bai, Xiaoyun Jia, Lei Yang, Yunfei Song, Muren Herrid, Wenjun Gao, Xu He, Jianbo Yao, George W. Smith, Changsheng Dong
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2019.00605

Membrane Sphingolipids Regulate the Fitness and Antifungal Protein Susceptibility of Neurospora crassa
Cited by: 21
Author(s): Anna Huber, Gregor Oemer, Nermina Malanovic, Karl Lohner, Laura Kovács, Willi Salvenmoser, Johannes Zschocke, Markus A. Keller, Florentine Marx
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2018.02864

Purification, Characterization and in vitro Evaluation of Polymyxin A From Paenibacillus dendritiformis: An Underexplored Member of the Polymyxin Family
Cited by: 11
Author(s): Manoj Jangra, Harmandeep Kaur Randhawa, Manpreet Kaur, Anugya Srivastava, Navdezda Maurya, Prashant P. Patil, Pallavi Jaswal, Ashish Arora, Manoj Raje, Hemraj Nandanwar
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2020.01993

Development and Application of a Prophage Integrase Typing Scheme for Group B Streptococcus
Cited by: 12
Author(s): Chiara Crestani, Taya Forde, Ruth N. Zadoks
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2021.599562

Antigenic Evolution on a Global Scale Reveals the Potential Natural Selection of Severe Acute Respiratory Syndrome-Coronavirus 2 by Pre-existing Cross-Reactive T-Cell Immunity
Cited by: 4
Author(s): Chengdong Zhang, Xuanxuan Jin, Xianyang Chen, Li Qiu, Qibin Leng, Tianyi Qiu
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-016-2927-4

Orthologs, turn-over, and remolding of tRNAs in primates and fruit flies
Cited by: 17
Author(s): Cristian A. Velandia-Huerto, Sarah J. Berkemer, Anne Hoffmann, Nancy Retzlaff, Liliana C. Romero Marroquín, Maribel Hernández-Rosales, Peter F. Stadler, Clara Isabel Bermúdez-Santana
Software Mentions: 1
Published: over 10 years ago

10.1099/ijsem.0.004763

Motilimonas cestriensis sp. nov., isolated from an inland brine spring in Northern England
Cited by: 5
Author(s): Matthew Kelbrick, Raeid M. M. Abed, André Antunes
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-13-303

Oomycete transcriptomics database: A resource for oomycete transcriptomes
Cited by: 8
Author(s): Sucheta Tripathy, Tejal Deo, Brett M. Tyler
Software Mentions: 1
Published: almost 15 years ago

10.3389/fmicb.2017.01990

Involvement of NpdA, a Putative 2-Nitropropane Dioxygenase, in the T3SS Expression and Full Virulence in Ralstonia solanacearum OE1-1
Cited by: 6
Author(s): Weiqi Zhang, Jing Li, Yu Tang, Kai Chen, Xiaojun Shi, Kouhei Ohnishi, Yong Zhang
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2014.00504

Human herpesviruses-encoded dUTPases: a family of proteins that modulate dendritic cell function and innate immunity
Cited by: 29
Author(s): Maria E. Ariza, Ronald Glaser, Marshall V. Williams
Software Mentions: 1
Published: about 12 years ago

10.1186/1471-2164-13-122

Identification of microRNAs from Amur grape (vitis amurensis Rupr.) by deep sequencing and analysis of microRNA variations with bioinformatics
Cited by: 87
Author(s): Chen Wang, Han jinsoo, Chonghuai Liu, Korir Nicholas Kibet, Emrul Kayesh, Lingfei Shangguan, Xiaoying Li, Jinggui Fang
Software Mentions: 1
Published: over 14 years ago

10.1099/ijs.0.010249-0

Construction of an interactive online phytoplasma classification tool, iPhyClassifier, and its application in analysis of the peach X-disease phytoplasma group (16SrIII)
Cited by: 463
Author(s): Yan Zhao, Wei Wei, Ing‐Ming Lee, Jonathan Shao, Xiaobing Suo, Robert E. Davis
Software Mentions: 1
Published: over 17 years ago

10.1186/1471-2164-8-434

The TriTryp Phosphatome: analysis of the protein phosphatase catalytic domains
Cited by: 90
Author(s): Rachel Brenchley, Humera Tariq, Helen McElhinney, Balázs Szöőr, Julie Huxley-Jones, Robert Stevens, Keith R. Matthews, Lydia Tabernero
Software Mentions: 1
Published: almost 19 years ago

10.3390/antiox7110164

Characterization of TrxC, an Atypical Thioredoxin Exclusively Present in Cyanobacteria
Cited by: 6
Author(s): Luis López‐Maury, Luis G. Heredia-Martínez, Francisco J. Florencio
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2021.676113

First Report of Coexistence of blaSFO–1 and blaNDM–1 β-Lactamase Genes as Well as Colistin Resistance Gene mcr-9 in a Transferrable Plasmid of a Clinical Isolate of Enterobacter hormaechei
Cited by: 12
Author(s): Wenxiu Ai, Ying Zhou, Bingjie Wang, Qing Zhan, Longhua Hu, Yanling Xu, Yinjuan Guo, Liangxing Wang, Fangyou Yu, Xiaolong Li
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-015-2185-x

Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon
Cited by: 25
Author(s): Joëlle Amselem, Marielle Vigouroux, Simone Oberhaensli, J. K. M. Brown, Laurence V. Bindschedler, Pari Skamnioti, Thomas Wicker, Pietro D. Spanu, Hadi Quesneville, Soledad Sacristán
Software Mentions: 1
Published: about 11 years ago

10.3389/fmicb.2019.02565

Root-Colonizing Endophytic Fungi of the Dominant Grass Stipa krylovii From a Mongolian Steppe Grassland
Cited by: 22
Author(s): Dániel G. Knapp, Ildikó Imrefi, Enkhtuul Boldpurev, Sándor Csíkos, Galiya Akhmetova, Péter János Berek-Nagy, Burenjargal Otgonsuren, Gábor M. Kovács
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2019.02700

Novel Isoprene-Degrading Proteobacteria From Soil and Leaves Identified by Cultivation and Metagenomics Analysis of Stable Isotope Probing Experiments
Cited by: 27
Author(s): Nasmille L Larke-Mejía, Andrew T. Crombie, Jennifer Pratscher, Terry J. McGenity, J. Colin Murrell
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2020.01573

Kinetics of Phenol Biodegradation by Heavy Metal Tolerant Rhizobacteria Glutamicibacter nicotianae MSSRFPD35 From Distillery Effluent Contaminated Soils
Cited by: 31
Author(s): Purushothaman Duraisamy, Jegan Sekar, Anu D. Arunkumar, V. R. Prabavathy
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.00792

Comparative Analysis of Genomics and Proteomics in the New Isolated Bacillus thuringiensis X022 Revealed the Metabolic Regulation Mechanism of Carbon Flux Following Cu2+ Treatment
Cited by: 9
Author(s): Meifang Quan, Junyan Xie, Xuemei Liu, Yang Li, Jie Rang, Tong Zhang, Fengjuan Zhou, Liqiu Xia, Shengbiao Hu, Yunjun Sun, Xuezhi Ding
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2164-12-S2-S6

CAMBer: an approach to support comparative analysis of multiple bacterial strains
Cited by: 19
Author(s): Michał Woźniak, Limsoon Wong, Jerzy Tiuryn
Software Mentions: 1
Published: almost 16 years ago

10.3389/fmicb.2016.01757

Comparative Analysis of Two Helicobacter pylori Strains using Genomics and Mass Spectrometry-Based Proteomics
Cited by: 10
Author(s): Roger Karlsson, Kaisa Thorell, Shaghayegh Hosseini, Diarmuid T. Kenny, Carina Sihlbom, Åsa Sjöling, Anders Karlsson, Intawat Nookaew
Software Mentions: 1
Published: about 10 years ago

10.1099/ijsem.0.004866

Mangrovivirga cuniculi gen. nov., sp. nov., a moderately halophilic bacterium isolated from bioturbated Red Sea mangrove sediment, and proposal of the novel family Mangrovivirgaceae fam. nov.
Cited by: 12
Author(s): Fatmah O. Sefrji, Grégoire Michoud, Ramona Marasco, Giuseppe Merlino, Daniele Daffonchio
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-14-551

Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range
Cited by: 71
Author(s): Neha Jalan, Dibyendu Kumar, Maxuel O. Andrade, Fahong Yu, Jeffrey B. Jones, James H. Graham, Frank F. White, João Carlos Setúbal, Nian Wang
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2020.00183

Host Transcriptional Response of Sclerotinia sclerotiorum Induced by the Mycoparasite Coniothyrium minitans
Cited by: 4
Author(s): Huizhang Zhao, Ting Zhou, Jiǎtāo Xiè, Jiāsēn Chéng, Dàohóng Jiāng, Yànpíng Fù
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2019.00460

Discovery of Novel Antibiotic Resistance Determinants in Forest and Grassland Soil Metagenomes
Cited by: 23
Author(s): Inka M. Willms, Aysha Kamran, Nils Frederik Aßmann, Denis Krone, Simon Henning Bolz, Fabian Fiedler, Heiko Nacke
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-13-135

A Gaijin-like miniature inverted repeat transposable element is mobilized in rice during cell differentiation
Cited by: 19
Author(s): Hua Dong, Lu Zhang, Zheng Kangle, Haigen Yao, Jack Chen, Feng-Chi Yu, Xiaoxing Yu, Bizeng Mao, Dong Zhang, Jian Yao, Debao Li
Software Mentions: 1
Published: over 14 years ago

10.1186/s12864-019-5721-2

Mitochondrial genome and transcriptome analysis of five alloplasmic male-sterile lines in Brassica juncea
Cited by: 19
Author(s): Zengxiang Wu, Kaining Hu, Mei Yan, Liping Song, Jing Wen, Chaozhi Ma, Jinxiong Shen, FU Ting-dong, Jinxing Tu
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-017-4210-8

Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus
Cited by: 12
Author(s): Deepak Nanjappa, Remo Sanges, Maria Immacolata Ferrante, Adriana Zingone
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2019.01351

Evolutionary Analysis of Unicellular Species in Chlamydomonadales Through Chloroplast Genome Comparison With the Colonial Volvocine Algae
Cited by: 13
Author(s): Yuxin Hu, Weiqin Xing, Song Huang, Huan Zhu, Guoxiang Liu, Zhengyu Hu
Software Mentions: 1
Published: over 7 years ago

10.1099/ijsem.0.003935

Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas, eleven species to the genus Kaistella, and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens
Cited by: 201
Author(s): Ainsley Nicholson, Christopher A. Gulvik, Anne M. Whitney, Ben W. Humrighouse, Melissa Bell, B. Holmes, A G Steigerwalt, Aaron Villarma, Mili Sheth, Dhwani Batra, Lori A. Rowe, Mark Burroughs, Jessica C Pryor, Jean‐François Bernardet, Celia J. Hugo, Peter Kämpfer, Jeffrey D. Newman, John R. McQuiston
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.03047

Understand the Potential Role of Aureobasidium pullulans, a Resident Microorganism From Grapevine, to Prevent the Infection Caused by Diplodia seriata
Cited by: 35
Author(s): Cátia Pinto, Valéria Custódio, Mariana Nunes, Aurélie Songy, Fanja Rabenoelina, Barbara Courteaux, Christophe Clément, Ana Catarina Gomes, Florence Fontaine
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12864-017-3952-7

The adaptive landscape of wildtype and glycosylation-deficient populations of the industrial yeast Pichia pastoris
Cited by: 9
Author(s): Josef W. Moser, Iain B. H. Wilson, Martin Dragosits
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2015.00675

Detection of Mycobacterium tuberculosis in extrapulmonary biopsy samples using PCR targeting IS6110, rpoB, and nested-rpoB PCR Cloning
Cited by: 14
Author(s): Hossein Meghdadi, Azar Dokht Khosravi, Ataallah Ghadiri, Amir Hossein Sina, Ameneh Alami
Software Mentions: 1
Published: over 11 years ago

10.1128/AAC.02496-16

<i>ERG11</i> Gene Mutations and <i>MDR1</i> Upregulation Confer Pan-Azole Resistance in Candida tropicalis Causing Disseminated Candidiasis in an Acute Lymphoblastic Leukemia Patient on Posaconazole Prophylaxis
Cited by: 21
Author(s): Liangshun You, W. Qian, Qing Yang, Liping Mao, Lan Zhu, Xianbo Huang, Jie Jin, Haitao Meng
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2164-15-220

Hen uterine gene expression profiling during eggshell formation reveals putative proteins involved in the supply of minerals or in the shell mineralization process
Cited by: 83
Author(s): Aurélien Brionne, Yves Nys, Christelle Hennequet-Antier, Joël Gautron
Software Mentions: 1
Published: over 12 years ago

10.3390/antibiotics10080896

Molecular Cloning and Functional Identification of the Antimicrobial Peptide Gene Ctri9594 from the Venom of the Scorpion Chaerilus tricostatus
Cited by: 2
Author(s): Dangui He, Zhijian Cao, Ruhong Zhang, Wenhua Li
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-6365-y

Mitochondrial genomes of the early land plant lineage liverworts (Marchantiophyta): conserved genome structure, and ongoing low frequency recombination
Cited by: 20
Author(s): Shanshan Dong, Chaoxian Zhao, Shouzhou Zhang, Li Zhang, Hong Wu, Sunil Kumar Sahu, Rui‐Liang Zhu, Yu Jia, Bernard Goffinet, Yang Liu
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2020.01600

The Exopolysaccharide Cepacian Plays a Role in the Establishment of the Paraburkholderia phymatum – Phaseolus vulgaris Symbiosis
Cited by: 12
Author(s): Yilei Liu, Barbara Bellich, Sebastian Hug, Leo Eberl, Paola Cescutti, Gabriella Pessi
Software Mentions: 1
Published: over 6 years ago

10.5812/ircmj.4024

Sequence Characterization of cDNA Sequence of Encoding of an Antimicrobial Peptide With No Disulfide Bridge from the Iranian Mesobuthus Eupeus Venomous Glands
Cited by: 5
Author(s): Ahmad Farajzadeh Sheikh, Abbas Jolodar, Shamsedin Ghaemmaghami
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-8-86

Phylogenomic analysis of proteins that are distinctive of Archaea and its main subgroups and the origin of methanogenesis
Cited by: 68
Author(s): Beile Gao, Radhey S. Gupta
Software Mentions: 1
Published: almost 20 years ago

10.3389/fmicb.2017.00663

Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory
Cited by: 111
Author(s): Xiaofeng Xia, Geoff M. Gurr, Liette Vasseur, Dan Zheng, Zhong Huang, Bingcai Qin, Junhan Lin, Yue Wang, Fengqin Song, Yong Li, Hailan Lin, Minsheng You
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2021.706700

Virulent Drexlervirial Bacteriophage MSK, Morphological and Genome Resemblance With Rtp Bacteriophage Inhibits the Multidrug-Resistant Bacteria
Cited by: 3
Author(s): Muhammad Saleem Iqbal Khan, Xiangzheng Gao, Keying Liang, Shengsheng Mei, Jin-biao Zhan
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.600576

Dual Microbial Inoculation, a Game Changer? – Bacterial Biostimulants With Multifunctional Growth Promoting Traits to Mitigate Salinity Stress in Spring Mungbean
Cited by: 32
Author(s): Kailash Chand Kumawat, Poonam Sharma, Sharon Nagpal, Rajeev Kumar Gupta, Asmita Sirari, Ramakrishnan M. Nair, H. Bindumadhava, Surender Singh
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.00434

Genomic and Functional Characterization of Enterococcus mundtii QAUEM2808, Isolated From Artisanal Fermented Milk Product Dahi
Cited by: 14
Author(s): Nawaz Farah, Muhammad Nadeem Khan, Aqib Javed, Ibrar Ahmed, Naeem Ali, Muhammad Ishtiaq Ali, Syeda Mariam Bakhtiar, Muhammad Imran
Software Mentions: 1
Published: over 7 years ago

10.3390/ijerph13030318

The Inflammation Response to DEHP through PPARγ in Endometrial Cells
Cited by: 18
Author(s): Qiansheng Huang, Huanteng Zhang, Yajie Chen, Yulang Chi, Shuang Dong
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2017.02530

Glyphosate Shapes a Dinoflagellate-Associated Bacterial Community While Supporting Algal Growth as Sole Phosphorus Source
Cited by: 24
Author(s): Cong Wang, Xin Lin, Ling Li, Lingxiao Lin, Senjie Lin
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijerph17020439

Diversity and Antimicrobial Activity of Culturable Fungal Endophytes in Solanum mauritianum
Cited by: 14
Author(s): Sharon Pauline Pelo, Vuyo Mavumengwana, Ezekiel Green
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2016.02048

Responses of Aspergillus flavus to Oxidative Stress Are Related to Fungal Development Regulator, Antioxidant Enzyme, and Secondary Metabolite Biosynthetic Gene Expression
Cited by: 57
Author(s): Jake C. Fountain, Prasad Bajaj, Spurthi N. Nayak, Liming Yang, Manish K. Pandey, Vinay Kumar, Ashwin S. Jayale, Anu Chitikineni, Robert D. Lee, Robert C. Kemerait, Rajeev K. Varshney, Bao‐Zhu Guo
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijerph18115515

Characterization of a Lactiplantibacillus plantarum R23 Isolated from Arugula by Whole-Genome Sequencing and Its Bacteriocin Production Ability
Cited by: 16
Author(s): Joana Barbosa, Helena Albano, Beatríz Silva, Maria Helena Almeida, Teresa Nogueira, Paula Teixeira
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-016-2709-z

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
Cited by: 260
Author(s): Jérémy Pasquier, Cédric Cabau, Thuy Thao Vi Nguyen, Elodie Jouanno, Dany Séverac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2164-9-238

Simultaneous gene expression profiling in human macrophages infected with Leishmania major parasites using SAGE
Cited by: 53
Author(s): Fatma Z. Guerfali, Dhafer Laouini, Lamia Guizani-Tabbane, Florence Ottonès, Khadija Ben-Aissa, Alia Benkahla, Laurent Manchon, David Piquemal, Sondos Smandi, Ons Mghirbi, Thérèse Commes, Jacques Marti, Koussay Dellagi
Software Mentions: 1
Published: over 18 years ago

10.1186/s12864-016-2915-8

Target-site and non-target-site based resistance to the herbicide tribenuron-methyl in flixweed (Descurainia sophia L.)
Cited by: 67
Author(s): Qian Yang, Wei Deng, Xuefeng Li, Qin Yu, Lianyang Bai, Mingqi Zheng
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2018.01245

Genome-Wide Analysis Reveals Ancestral Lack of Seventeen Different tRNAs and Clade-Specific Loss of tRNA-CNNs in Archaea
Cited by: 0
Author(s): Yue Wu, Ping Wu, Bin Wang, Zhu‐Qing Shao
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2164-8-338

The G protein-coupled receptor subset of the rat genome
Cited by: 179
Author(s): David E. Gloriam, Robert Fredriksson, Helgi B. Schiöth
Software Mentions: 1
Published: almost 20 years ago

10.3389/fmicb.2018.02384

WebHERV: A Web Server for the Computational Investigation of Gene Expression Associated With Endogenous Retrovirus-Like Sequences
Cited by: 3
Author(s): Konstantin Kruse, Martin Nettling, Nadine Wappler, Alexander Emmer, Malte Kornhuber, Martin S. Staege, Ivo Große
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2020.00701

Probiotic Consortia: Reshaping the Rhizospheric Microbiome and Its Role in Suppressing Root-Rot Disease of Panax notoginseng
Cited by: 42
Author(s): Jinhao Zhang, Lanfang Wei, Jun Yang, Waqar Ahmed, Yating Wang, FU Li-dong, Guanghai Ji
Software Mentions: 1
Published: over 6 years ago

10.3390/ijerph18126275

Lack of Zika Virus and Other Recognized Flaviviruses among the Mosquito Vectors during and Post the Hajj Mass Gathering
Cited by: 1
Author(s): Saber Yezli, Muhammad Yasir, Yara Yassin, Afnan Almazrua, Tagreed L. Alsubhi, Norah A. Othman, Abdiasiis Omar, Abdelmohsin Mo Abdoon, Yousif Eldirdiry Elamin, Abuzaid Abuzaid, Turki Ghazi Bafaraj, Hassen Alzahrani, Sameer Almahmoodi, Hussam Alzahrani, Kingsley Bieh, B. M. Alotaibi, Anas Khan, Mohammed Alzahrani, Esam I. Azhar
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.704802

Digging Up the Roots: Taxonomic and Phylogenetic Disentanglements in Corticiaceae s.s. (Corticiales, Basidiomycota) and Evolution of Nutritional Modes
Cited by: 3
Author(s): Masoomeh Ghobad-Nejhad, Ewald Langer, Karen K. Nakasone, Paul Diederich, R. Henrik Nilsson, Mario Rajchenberg, J. Ginns
Software Mentions: 1
Published: about 5 years ago

10.3390/antibiotics10040433

The Bacterial Genomic Context of Highly Trimethoprim-Resistant DfrB Dihydrofolate Reductases Highlights an Emerging Threat to Public Health
Cited by: 7
Author(s): Claudèle Lemay-St-Denis, S. Sharma and R. Diwan, Joelle N. Pelletier
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.656896

Analysis of Antimicrobial Peptide Metabolome of Bacterial Endophyte Isolated From Traditionally Used Medicinal Plant Millettia pachycarpa Benth
Cited by: 13
Author(s): Ng Ngashangva, Pulok K. Mukherjee, Kusum Sharma, Mohan Chandra Kalita, Indira Sarangthem
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.02775

Hydrolytic Capabilities as a Key to Environmental Success: Chitinolytic and Cellulolytic Acidobacteria From Acidic Sub-arctic Soils and Boreal Peatlands
Cited by: 45
Author(s): Svetlana E. Belova, Nikolai V. Ravin, Т. А. Панкратов, Andrey L. Rakitin, Anastasia A. Ivanova, Alexey V. Beletsky, Andrey V. Mardanov, Jaap S. Sinninghe Damsté, Svetlana N. Dedysh
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2019.02586

Effect of Varying Nitrate Concentrations on Denitrifying Phosphorus Uptake by DPAOs With a Molecular Insight Into Pho Regulon Gene Expression
Cited by: 2
Author(s): Chandan Mukherjee, Rajojit Chowdhury, Mst. Momtaj Begam, Sayak Ganguli, Ritabrata Basak, Basab Chaudhuri, Krishna Ray
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2020.01611

Antimicrobial Susceptibility and Virulence of mcr-1-Positive Enterobacteriaceae in China, a Multicenter Longitudinal Epidemiological Study
Cited by: 8
Author(s): Bin Jiang, Pengcheng Du, Peng Jia, Enbo Liu, Timothy Kudinha, Hui Zhang, Dongxue Li, Yingchun Xu, Liangyi Xie, Qiwen Yang
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-10-435

Assessing the genomic evidence for conserved transcribed pseudogenes under selection
Cited by: 62
Author(s): Amit N. Khachane, Paul M. Harrison
Software Mentions: 1
Published: almost 18 years ago

10.3389/fmicb.2017.00325

Functional Characterization of Endophytic Fungal Community Associated with Oryza sativa L. and Zea mays L.
Cited by: 157
Author(s): Momota Potshangbam, Sarangthem Indira Devi, Dinabandhu Sahoo, Gary A. Strobel
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2020.573679

The Neuromodulator-Encoding sadA Gene Is Widely Distributed in the Human Skin Microbiome
Cited by: 7
Author(s): Arif Luqman, Susanne Zabel, Samane Rahmdel, Britta Merz, Nicole Gruenheit, Johannes Harter, Kay Nieselt, Friedrich Götz
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2164-12-263

Transcriptomic assessment of resistance to effects of an aryl hydrocarbon receptor (AHR) agonist in embryos of Atlantic killifish (Fundulus heteroclitus) from a marine Superfund site
Cited by: 51
Author(s): Marjorie F. Oleksiak, Sibel I. Karchner, Matthew J. Jenny, Diana G. Franks, David B. Mark Welch, Mark E. Hahn
Software Mentions: 1
Published: over 15 years ago

10.3389/fmicb.2021.663768

Staphylococcus saprophyticus From Clinical and Environmental Origins Have Distinct Biofilm Composition
Cited by: 11
Author(s): Opeyemi U Lawal, Martha Macêdo de Lima Barata, Maria João Fraqueza, Peder Worning, Mette Damkjær Bartels, Luísa Gonçalves, Paulo Paixão, Elsa Gonçalves, Cristina Toscano, Joanna Empel, Małgorzata Urbaś, Maria A. Domiìnguez, Henrik Westh, Hermı́nia de Lencastre, Maria Miragaia
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-015-1373-z

Transcriptomic profiling of the salt-stress response in the halophyte Halogeton glomeratus
Cited by: 55
Author(s): Juncheng Wang, Baochun Li, Yali Meng, Xiao Ma, Yong Lai, Erjing Si, Ke Yang, Ping Ren, Xianwen Shang, Huajun Wang
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2018.00349

Petrophilic, Fe(III) Reducing Exoelectrogen Citrobacter sp. KVM11, Isolated From Hydrocarbon Fed Microbial Electrochemical Remediation Systems
Cited by: 12
Author(s): Krishnaveni Venkidusamy, Ananda Rao Hari, Mallavarapu Megharaj
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2018.01662

Construction of a Shuttle Vector Using an Endogenous Plasmid From the Cyanobacterium Synechocystis sp. PCC6803
Cited by: 30
Author(s): Haojie Jin, Yan Wang, Adam Idoine, Devaki Bhaya
Software Mentions: 1
Published: over 8 years ago

10.1099/jmmcr.0.005137

Ignavigranum ruoffiae, a rare pathogen that caused a skin abscess
Cited by: 2
Author(s): Adriana N. De Paulis, Eugenia Bertona, Miguel Gutiérrez, María Soledad Ramírez, Carlos Vay, Silvia C. Predari
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12864-018-4672-3

Elucidation of the anti-hyperammonemic mechanism of Lactobacillus amylovorus JBD401 by comparative genomic analysis
Cited by: 11
Author(s): Parul Singh, Hea-Jong Chung, Inah Lee, Roshan D’Souza, Hyeon Jin Kim, Seong‐Tshool Hong
Software Mentions: 1
Published: over 8 years ago

10.1099/jmmcr.0.005136

First confirmed case of nasal pythiosis in a horse in Thailand
Cited by: 7
Author(s): Walaiporn Tonpitak, Watcharapol Pathomsakulwong, Chulabha Sornklien, Theerapong Krajaejun, Suppathat Wutthiwithayaphong
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2016.00172

Q-PCR Based Culture-Independent Enumeration and Detection of Enterobacter: An Emerging Environmental Human Pathogen in Riverine Systems and Potable Water
Cited by: 20
Author(s): Chandra Bali Patel, Rishi Shanker, Vijai Kumar Gupta, Ram Sanmukh Upadhyay
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2164-7-25

The expansion of the metazoan microRNA repertoire
Cited by: 325
Author(s): Jana Hertel, Manuela Lindemeyer, Kristin Missal, Claudia Fried, Andrea Tanzer, Ivo L. Hofacker, Peter F. Stadler
Software Mentions: 1
Published: over 20 years ago

10.1186/s12864-015-2276-8

Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection
Cited by: 35
Author(s): Irene Bianconi, Julie Jeukens, Luca Freschi, Beatriz Alcalá-Franco, Marcella Facchini, Brian Boyle, Antonio Molinaro, Iréna Kukavica-Ibrulj, Burkhard Tümmler, Roger C. Levesque, Alessandra Bragonzi
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmolb.2016.00071

Comparative Genomics of the Conjugation Region of F-like Plasmids: Five Shades of F
Cited by: 52
Author(s): Raúl Fernández-López, María de Toro, Gabriel Moncalián, M. Pilar Garcillán-Barcia, Fernando de la Cruz
Software Mentions: 1
Published: about 10 years ago

10.3389/fnana.2015.00165

Expression of a Novel D4 Dopamine Receptor in the Lamprey Brain. Evolutionary Considerations about Dopamine Receptors
Cited by: 8
Author(s): Juan Pérez‐Fernández, Manuel Megı́as, Manuel A. Pombal
Software Mentions: 1
Published: almost 11 years ago

10.1099/jmmcr.0.004218

Case of Fonsecaea nubica chromoblastomycosis from the French territory of Mayotte
Cited by: 6
Author(s): Estelle Cateau, V. Cante, Dea Garcia Hermoso, Marie‐Hélène Rodier
Software Mentions: 1
Published: almost 12 years ago

10.3389/fneur.2014.00269

Effects of Low-Level Blast Exposure on the Nervous System: Is There Really a Controversy?
Cited by: 77
Author(s): Gregory A. Elder, James L. Stone, Stephen T. Ahlers
Software Mentions: 1
Published: almost 12 years ago

10.3389/fnins.2017.00038

Promoter-Specific Expression and Genomic Structure of IgLON Family Genes in Mouse
Cited by: 23
Author(s): Taavi Vanaveski, Katyayani Singh, Jane Narvik, Kattri‐Liis Eskla, Tanel Visnapuu, Indrek Heinla, J. Mohan, Jürgen Innos, Kersti Lilleväli, Mari-Anne Philips, Eero Vasar
Software Mentions: 1
Published: almost 10 years ago

10.1186/1471-2164-14-222

Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat
Cited by: 13
Author(s): Tatiana Belova, Bin Zhan, Jonathan Wright, Mario Cáccamo, Torben Asp, Hana Šimková, Matthew Kent, Christian Berthou, Frank Panitz, Sigbjørn Lien, Jaroslav Doležel, Odd‐Arne Olsen, Simen Rød Sandve
Software Mentions: 1
Published: over 13 years ago

10.3389/fonc.2021.665105

AnnexinA5 Might Suppress the Phenotype of Human Gastric Cancer Cells via ERK Pathway
Cited by: 6
Author(s): Xiaojie Wang, Ye Dai, Yong Zhao, Meichuan Li, Jialü Zhang, Yunzhe Ci, Huan Wang, Xin Li
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2018.00837

Lico A Causes ER Stress and Apoptosis via Up-Regulating miR-144-3p in Human Lung Cancer Cell Line H292
Cited by: 46
Author(s): Gang Chen, Yueping Ma, Zhe Jiang, Yuan Feng, Yueqing Han, Ye-Tian Tang, Juan Zhang, Hui Ni, Xuezheng Li, Ning Li
Software Mentions: 1
Published: over 8 years ago