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Projects: pypi: abstar

https://packages.ecosyste.ms/registries/pypi.org/packages/abstar

VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
48 versions
Latest release: about 3 years ago
1 dependent package
481 downloads last month

Enhanced Analysis
Educational Contributors: bryanbriney@dhcp-228-113.scripps.edu bryanbriney@wireless-189-113.scripps.edu bryanbriney@wireless-190-148.scripps.edu bryanbriney@wireless-188-143.scripps.edu bryanbriney@wireless-189-0.scripps.edu jwillis@scripps.edu bryanbriney@wireless-191-82.scripps.edu bryanbriney@wireless-189-210.scripps.edu bryanbriney@wireless-189-170.scripps.edu
Repository Activity:
Repository Owner: Bryan Briney (user) Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +180 Educational commit emails
    9 contributors with educational email addresses
  • +20 Academic repository owner
    Repository owned by academic institution
  • +6 Science terms in README
    3 scientific terms found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning abstar 2

10.1093/bioinformatics/btz845
Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences
Cited by: 31
Author(s): Erand Smakaj, Lmar Babrak, Mats Ohlin, Mikhail Shugay, Bryan Briney, Deniz Tosoni, Christopher Galli, Vendi Grobelsek, I. D’Angelo, Branden J Olson, Sai T. Reddy, Victor Greiff, Johannes Trück, Susanna Marquez, William D. Lees, Enkelejda Miho
Software Mentions: 2
Published: over 6 years ago
10.1016/j.celrep.2021.109173
Dynamics of B cell repertoires and emergence of cross-reactive responses in patients with different severities of COVID-19
Cited by: 40
Author(s): Zachary Montague, Huibin Lv, Jakub Otwinowski, William S DeWitt, Giulio Isacchini, Garrick K. Yip, Wilfred Ng, Owen Tak Yin Tsang, Meng Yuan, Hejun Liu, Ian A. Wilson, J. S. Malik Peiris, Nicholas C. Wu, Armita Nourmohammad, Chris Ka Pun Mok
Software Mentions: 1
Published: about 5 years ago