pypi: Zen | Projects | Ecosyste.ms: Papers

10.7554/eLife.53414

Adult chondrogenesis and spontaneous cartilage repair in the skate, Leucoraja erinacea
Cited by: 25
Author(s): Aleksandra Marconi, Amy Hancock-Ronemus, J. Andrew Gillis
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.27134

Mitosis can drive cell cannibalism through entosis
Cited by: 74
Author(s): Joanne Durgan, Yun-Yu Tseng, Jens C. Hamann, Marie-Charlotte Domart, Lucy M. Collinson, Alan Hall, Michael Overholtzer, Oliver Florey
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.50583

Gradient-independent Wnt signaling instructs asymmetric neurite pruning in C. elegans
Cited by: 6
Author(s): Menghao Lu, Kota Mizumoto
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.42049

Absence of TGFβ signaling in retinal microglia induces retinal degeneration and exacerbates choroidal neovascularization
Cited by: 68
Author(s): Wenxin Ma, Sean Silverman, Lian Zhao, Rafael Villasmil, Maria M Campos, Juan Amaral, Wai T. Wong
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.38801

Rap2 and TNIK control Plexin-dependent tiled synaptic innervation in C. elegans
Cited by: 16
Author(s): Xi Chen, Akihiro Shibata, Ardalan Hendi, Mizuki Kurashina, Ethan Fortes, Nicholas L. Weilinger, Brian A. MacVicar, Hideji Murakoshi, Kota Mizumoto
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.32510

Pauses in cholinergic interneuron firing exert an inhibitory control on striatal output in vivo
Cited by: 38
Author(s): Stefano Zucca, Aya Zucca, T. Nakano, Sho Aoki, Jeffery R. Wickens
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.03245

Adipocyte ALK7 links nutrient overload to catecholamine resistance in obesity
Cited by: 61
Author(s): Tingqing Guo, Patricia Mármol, Annalena Moliner, Marie Björnholm, Chao Zhang, Kevan M. Shokat, Carlos F. Ibáñez
Software Mentions: 1
Published: about 12 years ago

10.7554/eLife.12040

A family of photoswitchable NMDA receptors
Cited by: 64
Author(s): Shai Berlin, Stephanie Szobota, Andreas Reiner, Elizabeth C. Carroll, Michael A. Kienzler, Alice Guyon, Tong Xiao, Dirk Trauner, Ehud Y. Isacoff
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.60234

Sonic hedgehog signaling directs patterned cell remodeling during cranial neural tube closure
Cited by: 17
Author(s): Eric Brooks, Mohammed Tarek Islam, Kathryn V. Anderson, Jennifer A. Zallen
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.59341

An hourglass circuit motif transforms a motor program via subcellularly localized muscle calcium signaling and contraction
Cited by: 4
Author(s): Steven R. Sando, Nikhil Bhatla, Eugene L. Q. Lee, H. Robert Horvitz
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.18459

Spatiotemporal regulation of autophagy during Caenorhabditis elegans aging
Cited by: 162
Author(s): Jessica T. Chang, Caroline Kumsta, Andrew Bennett Hellman, Linnea M Adams, Malene Hansen
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.36456

Spatial and temporal analysis of PCP protein dynamics during neural tube closure
Cited by: 54
Author(s): Mitchell T. Butler, John B. Wallingford
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.16118

Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation
Cited by: 39
Author(s): Nick E. Phillips, Cerys Manning, Tom Pettini, Veronica Biga, Elli Marinopoulou, P. Stanley, James Boyd, James Bagnall, Pawel Paszek, David G. Spiller, Mike White, Marc Goodfellow, Tobias Galla, Magnus Rattray, Nancy Papalopulu
Software Mentions: 1
Published: about 10 years ago

10.7554/eLife.53387

A branched heterochronic pathway directs juvenile-to-adult transition through two LIN-29 isoforms
Cited by: 10
Author(s): Chiara Azzi, Florian Aeschimann, Anca Neagu, Helge Großhans
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.25312

Synthetically modified guide RNA and donor DNA are a versatile platform for CRISPR-Cas9 engineering
Cited by: 120
Author(s): Kunwoo Lee, Vanessa A Mackley, Anirudh Rao, Anthony T Chong, Mark Dewitt, Jacob E. Corn, Niren Murthy
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.58744

Seizures are a druggable mechanistic link between TBI and subsequent tauopathy
Cited by: 19
Author(s): Hadeel Alyenbaawi, Richard Kanyo, Laszlo F. Locskai, Razieh Kamali-Jamil, Michèle G. DuVal, Quan Bai, Holger Wille, Edward A. Burton, W. Ted Allison
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.53308

TMEM87a/Elkin1, a component of a novel mechanoelectrical transduction pathway, modulates melanoma adhesion and migration
Cited by: 38
Author(s): Amrutha Patkunarajah, Jeffrey H. Stear, Mirko Moroni, Lioba Schroeter, Jedrzej Blaszkiewicz, Jacqueline L.E. Tearle, Charles D. Cox, Carina Fürst, Oscar Sánchez-Carranza, María del Ángel Ocaña Fernández, Raluca Fleischer, Murat Eravci, Christoph Weise, Boris Martinac, Maté Biro, Gary R. Lewin, Kate Poole
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.02164

Precardiac deletion of Numb and Numblike reveals renewal of cardiac progenitors
Cited by: 34
Author(s): Lincoln T. Shenje, Peter Andersen, Hideki Uosaki, Laviel Fernandez, Peter P. Rainer, Gun Sik Cho, Dong Ik Lee, Weimin Zhong, Richard P. Harvey, David A. Kass, Chulan Kwon
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.64903

The Prop1-like homeobox gene unc-42 specifies the identity of synaptically connected neurons
Cited by: 26
Author(s): Emily G. Berghoff, Lori Glenwinkel, Abhishek Bhattacharya, HaoSheng Sun, Erdem Varol, Nicki Mohammadi, Amelia Antone, Yi Feng, Ken Nguyen, Steven J. Cook, John J. Wood, Neda Masoudi, Cyril Cros, Yasmin H Ramadan, Denise M. Ferkey, David H. Hall, Oliver Hobert
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.10625

Trogocytosis-associated cell to cell spread of intracellular bacterial pathogens
Cited by: 55
Author(s): Shaun Steele, Lauren C. Radlinski, Sharon Taft-Benz, Jason Brunton, Thomas H. Kawula
Software Mentions: 1
Published: almost 11 years ago

10.7554/eLife.51221

Notochord vacuoles absorb compressive bone growth during zebrafish spine formation
Cited by: 34
Author(s): Jennifer Bagwell, Jim C. Norman, Kathryn Ellis, Brianna Peskin, J.C.M. Hwang, Xiaoyan Ge, Stacy Nguyen, Sarah K. McMenamin, Didier Y. Stainier, Michel Bagnat
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.08695

Axon injury triggers EFA-6 mediated destabilization of axonal microtubules via TACC and doublecortin like kinase
Cited by: 45
Author(s): Lizhen Chen, Marian Chuang, Thijs Koorman, Mike Boxem, Yishi Jin, Andrew Chisholm
Software Mentions: 1
Published: about 11 years ago

10.7554/eLife.55745

Lysosome activity is modulated by multiple longevity pathways and is important for lifespan extension in C. elegans
Cited by: 82
Author(s): Yanan Sun, Meijiao Li, Dongfeng Zhao, Xin Li, Chonglin Yang, Xiaochen Wang
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.59826

Microbiota-derived short chain fatty acids modulate microglia and promote Aβ plaque deposition
Cited by: 116
Author(s): Alessio Colombo, Rebecca Sadler, Gemma Llovera, Vikramjeet Singh, Stefan Roth, Steffanie Heindl, Laura Sebastián Monasor, Aswin Verhoeven, Finn Peters, Samira Parhizkar, Frits Kamp, Mercedes Gomez de Agüero, Andrew J. Macpherson, Edith Winkler, Jochen Herms, Corinne Benakis, Martin Dichgans, Harald Steiner, Martin Giera, Christian Haass, Sabina Tahirović, Arthur Liesz
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.48308

Dissection of central clock function in Drosophila through cell-specific CRISPR-mediated clock gene disruption
Cited by: 44
Author(s): Rebecca Delventhal, Reed M. O’Connor, Meghan Pantalia, Matthew Ulgherait, Han X Kim, Maylis K Basturk, Julie C. Canman, Mimi Shirasu-Hiza
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.28939

Heg1 and Ccm1/2 proteins control endocardial mechanosensitivity during zebrafish valvulogenesis
Cited by: 46
Author(s): Stefan Donat, Marta Lourenço, Alessio Paolini, Cécile Otten, Marc Renz, Salim Abdelilah‐Seyfried
Software Mentions: 1
Published: almost 9 years ago

10.7554/eLife.63329

Cortical astrocytes independently regulate sleep depth and duration via separate GPCR pathways
Cited by: 68
Author(s): Trisha V. Vaidyanathan, Max Collard, Sae Yokoyama, Michael E Reitman, Kira E. Poskanzer
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.66588

Cell-to-cell heterogeneity in Sox2 and Bra expression guides progenitor motility and destiny
Cited by: 14
Author(s): Michèle Romanos, Guillaume Allio, Myriam Roussigné, Léa Combres, Nathalie Escalas, Cathy Soula, François Médevielle, Benjamin Steventon, Ariane Trescases, Bertrand Bénazéraf
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.33676

BDNF-TrkB signaling in oxytocin neurons contributes to maternal behavior
Cited by: 33
Author(s): Kristen R. Maynard, John W. Hobbs, BaDoi N. Phan, Amolika Gupta, Sumita Rajpurohit, Courtney Williams, Anandita Rajpurohit, Joo Heon Shin, Andrew E. Jaffe, Keri Martinowich
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.46756

Coordinated hedgehog signaling induces new hair follicles in adult skin
Cited by: 24
Author(s): Xiaoyan Sun, Alexandra Are, Karl Annusver, Unnikrishnan Sivan, Tina Jacob, Tim Dalessandri, Simon Joost, Anja Füllgrabe, Marco Gerling, Maria Kasper
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.01096

ABC transporter functions as a pacemaker for sequestration of plant glucosides in leaf beetles
Cited by: 62
Author(s): Anja Strauß, Sven Peters, Wilhelm Boland, Antje Burse
Software Mentions: 1
Published: almost 13 years ago

10.7554/eLife.47996

Self-organization of modular network architecture by activity-dependent neuronal migration and outgrowth
Cited by: 16
Author(s): Samora Okujeni, Ulrich Egert
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.12703

Mouse models of human PIK3CA-related brain overgrowth have acutely treatable epilepsy
Cited by: 72
Author(s): Achira Roy, Jonathan Skibo, Franck Kalume, Jing Ni, Sherri L. Rankin, Yiling Lu, William B. Dobyns, Gordon B. Mills, Jean J. Zhao, Suzanne J. Baker, Kathleen J. Millen
Software Mentions: 1
Published: almost 11 years ago

10.7554/eLife.21690

AMPK and vacuole-associated Atg14p orchestrate μ-lipophagy for energy production and long-term survival under glucose starvation
Cited by: 125
Author(s): Arnold Y. Seo, Pick-Wei Lau, Daniel Feliciano, Prabuddha Sengupta, Mark A. Le Gros, Bertrand Cinquin, Carolyn A. Larabell, Jennifer Lippincott‐Schwartz
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.51890

Auditory cortex shapes sound responses in the inferior colliculus
Cited by: 37
Author(s): Jennifer M. Blackwell, Alexandria M.H. Lesicko, Winnie Rao, Mariella De Biasi, Maria N. Geffen
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.58281

Membrane characteristics tune activities of endosomal and autophagic human VPS34 complexes
Cited by: 31
Author(s): Yohei Ohashi, Shirley Tremel, Glenn R. Masson, Lauren McGinney, Jérôme Boulanger, Ksenia Rostislavleva, Christopher M. Johnson, Izabella Niewczas, Jonathan Clark, Roger L. Williams
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.69387

Single-molecule imaging of chromatin remodelers reveals role of ATPase in promoting fast kinetics of target search and dissociation from chromatin
Cited by: 27
Author(s): Jee Min Kim, Pat Visanpattanasin, Vivian Jou, Sheng Liu, Xiaona Tang, Qinsi Zheng, Kai Yu Li, Jonathan C. Snedeker, Luke D. Lavis, Timothée Lionnet, Carl Wu
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.10734

Polo-like kinase 1 induces epithelial-to-mesenchymal transition and promotes epithelial cell motility by activating CRAF/ERK signaling
Cited by: 71
Author(s): Jianyong Wu, Andrei I. Ivanov, Paul B. Fisher, Zheng Fu
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.32271

Inhibitor-induced HER2-HER3 heterodimerisation promotes proliferation through a novel dimer interface
Cited by: 54
Author(s): Jeroen Claus, Gargi Patel, Flavia Autore, Audrey Colomba, Gregory Weitsman, Tanya Soliman, Selene K. Roberts, Laura C. Zanetti-Domingues, Michael Hirsch, Francesca Collu, Roger George, Elena Ortiz-Zapater, Paul R. Barber, B. Vojnovic, Yosef Yarden, Marisa L. Martin-Fernandez, Angus J.M. Cameron, Franca Fraternali, Tony Ng, Peter J. Parker
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.45047

Microtubule plus-end dynamics link wound repair to the innate immune response
Cited by: 24
Author(s): Clara Taffoni, Shizue Omi, Caroline Huber, Sébastien Mailfert, Mathieu Fallet, Jean-François Rupprecht, Jonathan J. Ewbank, Nathalie Pujol
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.45976

Distinct inflammatory and wound healing responses to complex caudal fin injuries of larval zebrafish
Cited by: 50
Author(s): Veronika Miskolci, Jayne M. Squirrell, Julie Rindy, William J.B. Vincent, John-Demian Sauer, Angela Gibson, Kevin W. Eliceiri, Anna Huttenlocher
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.56374

Intrinsic control of neuronal diversity and synaptic specificity in a proprioceptive circuit
Cited by: 20
Author(s): Maggie M Shin, Catarina Catela, Jeremy S. Dasen
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.12534

TBP/TFIID-dependent activation of MyoD target genes in skeletal muscle cells
Cited by: 18
Author(s): Barbora Malecová, Alessandra Dall’Agnese, Luca Madaro, Sole Gatto, Paula Coutinho Toto, Sonia Albini, Ryan Tj, Làszlò Tora, Prem Puri
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.69861

Integrin α5β1 nano-presentation regulates collective keratinocyte migration independent of substrate rigidity
Cited by: 9
Author(s): Jacopo Di Russo, Jennifer L. Young, Julian Wr Wegner, Timmy Steins, Horst Kessler, Joachim P. Spatz
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.04047

Astrocytes refine cortical connectivity at dendritic spines
Cited by: 128
Author(s): W. Christopher Risher, Sagar S. Patel, Il Hwan Kim, Akiyoshi Uezu, Srishti Bhagat, Daniel K. Wilton, Louis-Jan Pilaz, Jonnathan Singh Alvarado, O. Yipkin Calhan, Debra L. Silver, Beth Stevens, Nicole Calakos, Scott H. Soderling, Çağla Eroğlu
Software Mentions: 1
Published: almost 12 years ago

10.7554/eLife.38976

FluoEM, virtual labeling of axons in three-dimensional electron microscopy data for long-range connectomics
Cited by: 22
Author(s): Florian Drawitsch, Ali Reza Karimi, Kevin M. Boergens, Moritz Helmstaedter
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.66596

Matriptase activation of Gq drives epithelial disruption and inflammation via RSK and DUOX
Cited by: 3
Author(s): Jiajia Ma, Scott Ca, Ying Na Ho, Harsha Mahabaleshwar, Katherine S. Marsay, Changqing Zhang, Christopher K.J. Teow, Soon Seng Ng, Weibin Zhang, Vinay Tergaonkar, Lynda J. Partridge, Sudipto Roy, Enrique Amaya, Thomas J. Carney
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.42823

A multiplexed DNA FISH strategy for assessing genome architecture in Caenorhabditis elegans
Cited by: 36
Author(s): Brandon D. Fields, Son C. Nguyen, Guy Nir, Scott Kennedy
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.23625

Stromule extension along microtubules coordinated with actin-mediated anchoring guides perinuclear chloroplast movement during innate immunity
Cited by: 60
Author(s): Amutha Sampath Kumar, Eunsook Park, Alexander Nedo, Ali Alqarni, Li Ren, Kyle Hoban, Shannon Modla, John H. McDonald, Chandra Kambhamettu, Savithramma P. Dinesh‐Kumar, Jeffrey Caplan
Software Mentions: 1
Published: almost 9 years ago

10.7554/eLife.55865

Inhibiting IRE1α-endonuclease activity decreases tumor burden in a mouse model for hepatocellular carcinoma
Cited by: 21
Author(s): Nataša Pavlović, Carlemi Calitz, Kess Thanapirom, Guiseppe Mazza, Krista Rombouts, Pär Gerwins, Femke Heindryckx
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.48507

Fgf-signaling is compartmentalized within the mesenchyme and controls proliferation during salamander limb development
Cited by: 34
Author(s): Sruthi Purushothaman, Ahmed Elewa, Ashley W. Seifert
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.21392

The paranodal cytoskeleton clusters Na+ channels at nodes of Ranvier
Cited by: 54
Author(s): Veronique Amor, Chuansheng Zhang, Anna Vainshtein, Ao Zhang, Daniel R. Zollinger, Yael Eshed-Eisenbach, Peter Brophy, Matthew N. Rasband, Elior Peles
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.16246

High-frequency stimulation-induced peptide release synchronizes arcuate kisspeptin neurons and excites GnRH neurons
Cited by: 147
Author(s): Jian Qiu, Casey C Nestor, Chunguang Zhang, Stéphanie L. Padilla, Richard D. Palmiter, Martin J. Kelly, Oline K. Rønnekleiv
Software Mentions: 1
Published: about 10 years ago

10.7554/eLife.04288

Spatial quality control bypasses cell-based limitations on proteostasis to promote prion curing
Cited by: 40
Author(s): Courtney L. Klaips, Megan L. Hochstrasser, Christine Langlois, Tricia R. Serio
Software Mentions: 1
Published: almost 12 years ago

10.7554/eLife.18246

Accelerated remyelination during inflammatory demyelination prevents axonal loss and improves functional recovery
Cited by: 191
Author(s): Feng Mei, Klaus Lehmann‐Horn, Yu‐Chu Shen, Kelsey A Rankin, Karin Stebbins, Daniel S. Lorrain, Kara Pekarek, Sharon A. Sagan, Lan Xiao, Cory Teuscher, Hans‐Christian von Büdingen, Jürgen Wess, J. Josh Lawrence, Ari J. Green, Stephen P.J. Fancy, Scott S. Zamvil, Jonah R. Chan
Software Mentions: 1
Published: about 10 years ago

10.7554/eLife.66011

Sustained expression of unc-4 homeobox gene and unc-37/Groucho in postmitotic neurons specifies the spatial organization of the cholinergic synapses in C. elegans
Cited by: 4
Author(s): Mizuki Kurashina, Jane Wang, Jeffrey Lin, Kathy Kyungeun Lee, Arpun Johal, Kota Mizumoto
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.00745

Scaffold nucleoporins Nup188 and Nup192 share structural and functional properties with nuclear transport receptors
Cited by: 70
Author(s): Kasper R. Andersen, Evgeny Onischenko, Jeffrey H Tang, Pravin Kumar, James Z. Chen, Alexander Ulrich, Jan Liphardt, Karsten Weis, Thomas Schwartz
Software Mentions: 1
Published: over 13 years ago

10.7554/eLife.00336

Sox10-dependent neural crest origin of olfactory microvillous neurons in zebrafish
Cited by: 47
Author(s): Ankur Saxena, Brian N Peng, Marianne Bronner‐Fraser
Software Mentions: 1
Published: over 13 years ago

10.7554/eLife.13053

Synthetic protein interactions reveal a functional map of the cell
Cited by: 18
Author(s): Lisa Berry, Guðjón Ólafsson, Elena Ledesma-Fernández, Peter H. Thorpe
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.02444

Complete morphologies of basal forebrain cholinergic neurons in the mouse
Cited by: 124
Author(s): Hao Wu, John Williams, Jeremy Nathans
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.47212

Pressure-driven release of viral genome into a host nucleus is a mechanism leading to herpes infection
Cited by: 38
Author(s): Alberto Brandariz-Núñez, Ting Liu, Ting Du, Alex Evilevitch
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.66393

Imaging cytoplasmic lipid droplets in vivo with fluorescent perilipin 2 and perilipin 3 knock-in zebrafish
Cited by: 15
Author(s): Meredith H. Wilson, Stephen C. Ekker, Steven A. Farber
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.67670

Ectocytosis prevents accumulation of ciliary cargo in C. elegans sensory neurons
Cited by: 17
Author(s): Adrià Razzauti, Patrick Laurent
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.13152

A bacteriophage endolysin that eliminates intracellular streptococci
Cited by: 60
Author(s): Yang Shen, Marilia Barros, Tarek Vennemann, D.T. Gallagher, Yin Yuan, Sara B Linden, Ryan D. Heselpoth, Dennis J. Spencer, David M. Donovan, John Moult, Vincent A. Fischetti, Frank Heinrich, Mathias Lösche, Daniel Nelson
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.10250

Tumor microenvironment derived exosomes pleiotropically modulate cancer cell metabolism
Cited by: 644
Author(s): Hongyun Zhao, Lifeng Yang, Joelle Baddour, Abhinav Achreja, Vincent Bernard, Tyler J. Moss, Juan C. Marini, Thavisha Tudawe, Elena G. Seviour, F Anthony San Lucas, Hector A. Alvarez, Sonal Gupta, Sourindra N. Maiti, Laurence J.N. Cooper, Donna M. Peehl, Prahlad T. Ram, Anirban Maitra, Deepak Nagrath
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.50613

Opioids modulate an emergent rhythmogenic process to depress breathing
Cited by: 31
Author(s): Xingwei Sun, Carolina Thörn Pérez, Nagaraj Halemani D, Xuesi M. Shao, Morgan Greenwood, Sarah Heath, Jack L. Feldman, Kaiwen Kam
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.13881

The postsynaptic t-SNARE Syntaxin 4 controls traffic of Neuroligin 1 and Synaptotagmin 4 to regulate retrograde signaling
Cited by: 38
Author(s): Kathryn P. Harris, Yao V Zhang, Zachary D Piccioli, Norbert Perrimon, J Troy Littleton
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.55896

The peroxisome counteracts oxidative stresses by suppressing catalase import via Pex14 phosphorylation
Cited by: 36
Author(s): Kanji Okumoto, Mahmoud El Shermely, Masanao Natsui, Hidetaka Kosako, Ryuichi Natsuyama, Toshihiro Marutani, Yukio Fujiki
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.35656

Estrogenic-dependent glutamatergic neurotransmission from kisspeptin neurons governs feeding circuits in females
Cited by: 63
Author(s): Jian Qiu, Heidi M. Rivera, Martha A. Bosch, Stéphanie L. Padilla, Todd L. Stincic, Richard D. Palmiter, Martin J. Kelly, Oline K. Rønnekleiv
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.61769

DCC regulates astroglial development essential for telencephalic morphogenesis and corpus callosum formation
Cited by: 3
Author(s): Laura Morcom, Ilan Gobius, Ashley P.L. Marsh, Rodrigo Suárez, Jonathan W. C. Lim, Caitlin Bridges, Yunan Ye, Laura R. Fenlon, Yvrick Zagar, Amelia M. Douglass, Amber Lee Skye Donahoo, Thomas Fothergill, Samreen Shaikh, Peter Kozulin, Timothy J. Edwards, Helen Cooper, Elliott H. Sherr, Alain Chédotal, Richard J. Leventer, Paul J. Lockhart, Linda J. Richards
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.00400

Convergence of pontine and proprioceptive streams onto multimodal cerebellar granule cells
Cited by: 203
Author(s): Cheng-Chiu Huang, Ken Sugino, Yasuyuki Shima, Caiying Guo, Suxia Bai, Brett D. Mensh, Sacha B. Nelson, Adam W. Hantman
Software Mentions: 1
Published: over 13 years ago

10.7554/eLife.62591

Glucose restriction drives spatial reorganization of mevalonate metabolism
Cited by: 13
Author(s): Sean Rogers, Hanaa Hariri, N. Ezgi Wood, Natalie Ortiz Speer, W. Mike Henne
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.61618

DRAXIN regulates interhemispheric fissure remodelling to influence the extent of corpus callosum formation
Cited by: 8
Author(s): Laura Morcom, Timothy J. Edwards, Eric Rider, Dorothy Jones-Davis, Jonathan W. C. Lim, Kok‐Siong Chen, Ryan J. Dean, Jens Bunt, Yunan Ye, Ilan Gobius, Rodrigo Suárez, Simone Mandelstam, Elliott H. Sherr, Linda J. Richards
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.36588

Autophagy-dependent ribosomal RNA degradation is essential for maintaining nucleotide homeostasis during C. elegans development
Cited by: 39
Author(s): Yubing Liu, Wei Zou, Peiguo Yang, Li Wang, Yan Ma, Hong Zhang, Xiaochen Wang
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.34829

Oligodendrocytes control potassium accumulation in white matter and seizure susceptibility
Cited by: 106
Author(s): Valerie A Larson, Yevgeniya A. Mironova, Kimberly G. Vanderpool, Ari Waisman, John E. Rash, Amit Agarwal, Dwight E. Bergles
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.26148

Laminin signals initiate the reciprocal loop that informs breast-specific gene expression and homeostasis by activating NO, p53 and microRNAs
Cited by: 32
Author(s): Saori Furuta, Gang Ren, Jian‐Hua Mao, Mina J. Bissell
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.19991

Filamin, a synaptic organizer in Drosophila, determines glutamate receptor composition and membrane growth
Cited by: 15
Author(s): GaYoung Lee, Thomas L. Schwarz
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.23239

The Plasmodium falciparum rhoptry protein RhopH3 plays essential roles in host cell invasion and nutrient uptake
Cited by: 74
Author(s): Emma S. Sherling, Ellen Knuepfer, Joseph Brzostowski, Louis H. Miller, Michael J. Blackman, Christiaan van Ooij
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.36806

NK cells inhibit Plasmodium falciparum growth in red blood cells via antibody-dependent cellular cytotoxicity
Cited by: 79
Author(s): Gunjan Arora, Geoffrey T. Hart, Javier Manzella-Lapeira, Justin Doritchamou, David L. Narum, L. Michael Thomas, Joseph Brzostowski, Sumati Rajagopalan, Ogobara K. Doumbo, Boubacar Traoré, Louis H. Miller, Susan K. Pierce, Patrick E. Duffy, Peter D. Crompton, Sanjay A. Desai, Eric O. Long
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.59148

Disynaptic cerebrocerebellar pathways originating from multiple functionally distinct cortical areas
Cited by: 33
Author(s): Julia U. Henschke, Janelle M.P. Pakan
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.25742

Early tissue damage and microstructural reorganization predict disease severity in experimental epilepsy
Cited by: 34
Author(s): Philipp Janz, Niels Schwaderlapp, Katharina Heining, Ute Häussler, Jan G. Korvink, Dominik von Elverfeldt, Jürgen Hennig, Ulrich Egert, Pierre LeVan, Carola A. Haas
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.12248

A mathematical model explains saturating axon guidance responses to molecular gradients
Cited by: 910
Author(s): Huyen Nguyen, Peter Dayan, Zac Pujic, Justin J. Cooper-White, Geoffrey J. Goodhill
Software Mentions: 1
Published: almost 11 years ago

10.7554/eLife.14577

A novel role for the root cap in phosphate uptake and homeostasis
Cited by: 71
Author(s): Satoshi Kanno, Jean-François Arrighi, Serge Chiarenza, Vincent Bayle, Richard Berthomé, Benjamin Péret, Hélène Javot, Étienne Delannoy, Elena Marín, Teruyuki Nakanishi, Marie-Christine Thibaud, Laurent Nussaume
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.16540

The Drosophila formin Fhos is a primary mediator of sarcomeric thin-filament array assembly
Cited by: 33
Author(s): Arkadi Shwartz, Nagaraju Dhanyasi, Eyal D. Schejter, Ben‐Zion Shilo
Software Mentions: 1
Published: about 10 years ago

10.7554/eLife.01808

Phosphoinositide-mediated oligomerization of a defensin induces cell lysis
Cited by: 146
Author(s): Ivan K. H. Poon, Amy A. Baxter, Fung T. Lay, Grant Mills, Christopher G. Adda, Jennifer A. E. Payne, Thanh Kha Phan, Gemma F. Ryan, Julie White, Prem K. Veneer, Nicole L. van der Weerden, Marilyn A. Anderson, Marc Kvansakul, Mark D. Hulett
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.05279

Dynamic filopodia are required for chemokine-dependent intracellular polarization during guided cell migration in vivo
Cited by: 46
Author(s): Dana Meyen, Katsiaryna Tarbashevich, Torsten U. Banisch, Carolina Wittwer, Michal Reichman-Fried, Benoît Maugis, Cecilia Grimaldi, Esther-Maria Messerschmidt, Erez Raz
Software Mentions: 1
Published: over 11 years ago

10.7554/eLife.10066

ILC3 GM-CSF production and mobilisation orchestrate acute intestinal inflammation
Cited by: 164
Author(s): Claire Pearson, Emily Thornton, Brent McKenzie, Anna-Lena Schaupp, Nicky Huskens, Thibault Griseri, N. West, Sim L. Tung, Benedict Seddon, Holm H. Uhlig, Fiona Powrie
Software Mentions: 1
Published: almost 11 years ago

10.7554/eLife.45508

DDR2 controls breast tumor stiffness and metastasis by regulating integrin mediated mechanotransduction in CAFs
Cited by: 61
Author(s): Samantha Van Hove Bayer, Whitney R. Grither, Audrey Brenot, Priscilla Y. Hwang, Craig E. Barcus, Melanie Ernst, Patrick Pence, Christopher Walter, Amit Pathak, Gregory D. Longmore
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.66988

A novel decoy strategy for polymyxin resistance in Acinetobacter baumannii
Cited by: 21
Author(s): Jae-Eun Park, Misung Kim, Byung Seop Shin, Mingyeong Kang, Jian Yang, Tae Kwon Lee, Woojun Park
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.22914

De-repression of the RAC activator ELMO1 in cancer stem cells drives progression of TGFβ-deficient squamous cell carcinoma from transition zones
Cited by: 13
Author(s): Heather A. McCauley, Véronique Chevrier, Daniel Birnbaum, Géraldine Guasch
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.56629

β spectrin-dependent and domain specific mechanisms for Na+ channel clustering
Cited by: 15
Author(s): Cheng-Hsin Liu, Ryan Seo, Tammy Szu-Yu Ho, Michael C. Stankewich, Peter J. Mohler, Thomas J. Hund, Jeffrey L. Noebels, Matthew N. Rasband
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.58065

Studying the biology of cytotoxic T lymphocytes in vivo with a fluorescent granzyme B-mTFP knock-in mouse
Cited by: 6
Author(s): Praneeth Chitirala, Hsin-Fang Chang, Paloma Martzloff, Christiane Harenberg, Keerthana Ravichandran, Midhat H. Abdulreda, Per Olof Berggren, Elmar Krause, Claudia Schirra, Trese Leinders‐Zufall, Fritz Benseler, Nils Brose, Jens Rettig
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.39786

Dopamine neuron glutamate cotransmission evokes a delayed excitation in lateral dorsal striatal cholinergic interneurons
Cited by: 47
Author(s): Nao Chuhma, Susana Mingote, Leora Yetnikoff, Abigail Kalmbach, Thong Ma, Samira Ztaou, Anna Claire Sienna, Sophia Tepler, Jean-François Poulin, Mark S. Ansorge, Rajeshwar Awatramani, Un Jung Kang, Stephen Rayport
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.11611

Role of competition between polarity sites in establishing a unique front
Cited by: 57
Author(s): Chi-Fang Wu, Jian-geng Chiou, Maria Minakova, Benjamin Woods, Denis Tsygankov, Trevin R. Zyla, Natasha S. Savage, Timothy C. Elston, Daniel J. Lew
Software Mentions: 1
Published: about 11 years ago

10.7554/eLife.07897

T-box3 is a ciliary protein and regulates stability of the Gli3 transcription factor to control digit number
Cited by: 29
Author(s): Uchenna Emechebe, Paolo Pavan, Julian M. Rozenberg, Bryn Moore, Ashley Firment, Tooraj Mirshahi, Anne M. Moon
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.57920

Macrophages promote endothelial-to-mesenchymal transition via MT1-MMP/TGFβ1 after myocardial infarction
Cited by: 38
Author(s): Laura Alonso-Herranz, Álvaro Sahún-Español, Ana Paredes, Pilar Gonzalo, Polyxeni Gkontra, Vanessa Núñez, Cristina Clemente, Marta Cedenilla, María Villalba-Orero, Javier Inserte, David Garcı́a-Dorado, Alicia G. Arroyo, Mercedes Ricote
Software Mentions: 1
Published: about 6 years ago

10.1186/s12974-019-1465-9

Myosin1f-mediated neutrophil migration contributes to acute neuroinflammation and brain injury after stroke in mice
Cited by: 24
Author(s): Yan Wang, Haojie Jin, Weifang Wang, Rui Wang, Heng Zhao
Software Mentions: 1
Published: over 7 years ago

10.1186/s12974-018-1134-4

The Aβ protofibril selective antibody mAb158 prevents accumulation of Aβ in astrocytes and rescues neurons from Aβ-induced cell death
Cited by: 42
Author(s): Sofia Söllvander, Elisabeth Nikitidou, Linn Gallasch, Marlena Zyśk, Linda Söderberg, Dag Sehlin, Lars Lannfelt, Anna Erlandsson
Software Mentions: 1
Published: over 8 years ago

10.1186/s12974-020-01888-0

Neuroinflammation is associated with infiltration of T cells in Lewy body disease and α-synuclein transgenic models
Cited by: 40
Author(s): Michiyo Iba, Changyoun Kim, Michelle Sallin, Somin Kwon, Anjali Verma, Cassia R. Overk, Robert A. Rissman, Ranjan Sen, Jyoti Misra Sen, Eliezer Masliah
Software Mentions: 1
Published: over 6 years ago

10.1186/s12974-020-01893-3

Muramyl dipeptide-mediated immunomodulation on monocyte subsets exerts therapeutic effects in a mouse model of Alzheimer’s disease
Cited by: 16
Author(s): Adham Fani Maleki, Giulia Cisbani, M. Plante, Paul Préfontaine, Nataly Laflamme, Jean Gosselin, Serge Rivest
Software Mentions: 1
Published: over 6 years ago

Projects: pypi: Zen

Enhanced Analysis

Science Score: 65/100

Penalties:

Papers Mentioning Zen 2,767