pypi: Zen | Projects | Ecosyste.ms: Papers

10.1371/journal.ppat.1008985

The CLIP-domain serine protease CLIPC9 regulates melanization downstream of SPCLIP1, CLIPA8, and CLIPA28 in the malaria vector Anopheles gambiae
Cited by: 16
Author(s): Gregory L. Sousa, Ritika Bishnoi, Richard H. G. Baxter, Michael Povelones
Software Mentions: 2
Published: about 5 years ago

10.1016/j.redox.2021.101905

Identification of proteins and cellular pathways targeted by 2-nitroimidazole hypoxic cytotoxins
Cited by: 4
Author(s): Faisal Bin Rashed, Alexandru Cezar Stoica, Dawn Macdonald, Hassan R. H. Elsaidi, Carolynne Ricardo, Bhumi Bhatt, Jack Moore, Diana Diaz‐Dussan, Nirilanto Ramamonjisoa, Yvonne M. Mowery, Sambasivarao Damaraju, Richard P. Fahlman, Piyush Kumar, Michael Weinfeld
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.ppat.1008473

Varicella zoster virus encodes a viral decoy RHIM to inhibit cell death
Cited by: 32
Author(s): Megan Steain, Max O. D. G. Baker, Chi L.L. Pham, Nirukshan Shanmugam, Yann Gambin, Emma Sierecki, Brian P. McSharry, Selmir Avdic, Barry Slobedman, Margaret Sunde, Allison Abendroth
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.ppat.1006379

Calmodulin-like proteins localized to the conoid regulate motility and cell invasion by Toxoplasma gondii
Cited by: 84
Author(s): Shaojun Long, Kevin M. Brown, Lisa L. Drewry, Bryan A. Anthony, Isabelle Phan, L. David Sibley
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.ppat.1008604

Pressurized DNA state inside herpes capsids—A novel antiviral target
Cited by: 19
Author(s): Alberto Brandariz-Núñez, S. Robinson, Alex Evilevitch
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.ppat.1004617

A Rho GDP Dissociation Inhibitor Produced by Apoptotic T-Cells Inhibits Growth of Mycobacterium tuberculosis
Cited by: 11
Author(s): Sambasivan Venkatasubramanian, Rohan Dhiman, Padmaja Paidipally, Satyanarayana Cheekatla, Deepak Tripathi, Elwyn Welch, Amy Tvinnereim, Brenda Jones, Dan Theodorescu, Peter F. Barnes, Ramakrishna Vankayalapati
Software Mentions: 2
Published: over 10 years ago

10.3390/jdb7030015

Pectoral Fin Anomalies in tbx5a Knockdown Zebrafish Embryos Related to the Cascade Effect of N-Cadherin and Extracellular Matrix Formation
Cited by: 4
Author(s): Jenn Kan Lu, Tzu Chun Tsai, Hsinyu Lee, Kai Hsia, Chih Hsun Lin, Jen Her Lu
Software Mentions: 2
Published: over 6 years ago

10.1002/cne.24640

The effect of Zika virus infection in the ferret
Cited by: 9
Author(s): Elizabeth Hutchinson, Mitali Chatterjee, Laura D. Reyes, Francis Tanam Djankpa, William G. Valiant, Bernard J. Dardzinski, Joseph J. Mattapallil, Carlo Pierpaoli, Sharon L. Juliano
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.ppat.1006019

Co-regulation of Iron Metabolism and Virulence Associated Functions by Iron and XibR, a Novel Iron Binding Transcription Factor, in the Plant Pathogen Xanthomonas
Cited by: 39
Author(s): Sheo Shankar Pandey, Pradeep Kumar Patnana, Santosh Kumar Lomada, Archana Tomar, Subhadeep Chatterjee
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.ppat.1008328

Glutamate dehydrogenase (Gdh2)-dependent alkalization is dispensable for escape from macrophages and virulence of Candida albicans
Cited by: 14
Author(s): Fitz Gerald S. Silao, Kicki Ryman, Tong Jiang, Matthew Ward, Nicolas Hansmann, Chris Molenaar, Ningning Liu, Changbin Chen, Per O. Ljungdahl
Software Mentions: 2
Published: about 5 years ago

10.1128/mBio.00589-20

Epstein-Barr Virus LMP1 Promotes Syntenin-1- and Hrs-Induced Extracellular Vesicle Formation for Its Own Secretion To Increase Cell Proliferation and Migration
Cited by: 36
Author(s): Dingani Nkosi, Sun Lee, Leanne C. Duke, Nilkumar Patel, Sunil Kumar Surapaneni, Mandip Singh, David G. Meckes
Software Mentions: 2
Published: over 5 years ago

10.1523/ENEURO.0020-14.2015

A Neuronal Activity-Dependent Dual Function Chromatin-Modifying Complex Regulates<i>Arc</i>Expression
Cited by: 26
Author(s): Nicodemus Edrick Oey, How Wing Leung, Rajaram Ezhilarasan, Lanlan Zhou, Roger W. Beuerman, Hendrika M.A. VanDongen, Antonius M.J. VanDongen
Software Mentions: 2
Published: almost 11 years ago

10.3389/fpls.2015.01187

Developmental Nuclear Localization and Quantification of GFP-Tagged EB1c in Arabidopsis Root Using Light-Sheet Microscopy
Cited by: 15
Author(s): Dominik Novák, Anna Kuchařová, Miroslav Ovečka, George Komis, Jozef Šamaj
Software Mentions: 2
Published: almost 10 years ago

10.3389/fphys.2018.00097

Neurally Released GABA Acts via GABAC Receptors to Modulate Ca2+ Transients Evoked by Trains of Synaptic Inputs, but Not Responses Evoked by Single Stimuli, in Myenteric Neurons of Mouse Ileum
Cited by: 20
Author(s): Katerina Koussoulas, Mathusi Swaminathan, Candice Fung, Joel C. Bornstein, Jaime Pei Pei Foong
Software Mentions: 2
Published: over 7 years ago

10.3389/fpls.2020.00693

Complementary Superresolution Visualization of Composite Plant Microtubule Organization and Dynamics
Cited by: 8
Author(s): Tereza Vavrdová, Pavel Křenek, Miroslav Ovečka, Olga Šamajová, Pavlína Floková, Petra Illésová, R. Šnaurová, Jozef Šamaj, George Komis
Software Mentions: 2
Published: over 5 years ago

10.3389/fnins.2021.736313

The Proliferation of Dentate Gyrus Progenitors in the Ferret Hippocampus by Neonatal Exposure to Valproic Acid
Cited by: 5
Author(s): Kazuhiko Sawada, Shiori Kamiya, Ichio Aoki
Software Mentions: 2
Published: about 4 years ago

10.3389/fncir.2017.00009

Mapping and Analysis of the Connectome of Sympathetic Premotor Neurons in the Rostral Ventrolateral Medulla of the Rat Using a Volumetric Brain Atlas
Cited by: 34
Author(s): Bowen Dempsey, Le Shen, Anita J. Turner, Phillip Bokiniec, Radhika Ramadas, Jan G. Bjaalie, Clément Menuet, Rachael L. Neve, Andrew M. Allen, Ann K. Goodchild, Simon McMullan
Software Mentions: 2
Published: over 8 years ago

10.3389/fnmol.2018.00345

S-palmitoylation Is Required for the Control of Growth Cone Morphology of DRG Neurons by CNP-Induced cGMP Signaling
Cited by: 13
Author(s): Alexandre Dumoulin, Alina Dagane, Gunnar Dittmar, Fritz G. Rathjen
Software Mentions: 2
Published: about 7 years ago

10.3389/fncir.2018.00035

Parvalbumin and GABA Microcircuits in the Mouse Superior Colliculus
Cited by: 49
Author(s): Claudio Villalobos, Qiong Wu, Psyche H Lee, Paul J. May, Michele A. Basso
Software Mentions: 2
Published: over 7 years ago

10.3389/fnmol.2018.00243

Use of Proteomic Imaging Coupled With Transcriptomic Analysis to Identify Biomolecules Responsive to Cochlear Injury
Cited by: 2
Author(s): Kenyaria V. Noble, Michelle L. Reyzer, Jeremy L. Barth, Hayes McDonald, Michael Tuck, Kevin L. Schey, Edward L. Krug, Hainan Lang
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2020.01501

Influence of Catecholamines (Epinephrine/Norepinephrine) on Biofilm Formation and Adhesion in Pathogenic and Probiotic Strains of Enterococcus faecalis
Cited by: 26
Author(s): Mélyssa Cambronel, Flore Nilly, Ouiza Mesguida, Amine M. Boukerb, Pierre‐Jean Racine, Olfa Baccouri, Valérie Borrel, J Forga Martel, Florian Fécamp, Rikki Knowlton, Kurt Zimmermann, Eugen Domann, Sophie Rodrigues, Marc Feuilloley, Nathalie Connil
Software Mentions: 2
Published: over 5 years ago

10.3389/fnmol.2018.00119

Mental Illnesses-Associated Fxr1 and Its Negative Regulator Gsk3β Are Modulators of Anxiety and Glutamatergic Neurotransmission
Cited by: 24
Author(s): Jivan Khlghatyan, Alesya Evstratova, Simon Chamberland, Aleksandra Marakhovskaia, Arash Bahremand, Katalin Tóth, Jean‐Martin Beaulieu
Software Mentions: 2
Published: over 7 years ago

10.3389/fimmu.2019.00542

Discrepancies in the Tumor Microenvironment of Spontaneous and Orthotopic Murine Models of Pancreatic Cancer Uncover a New Immunostimulatory Phenotype for B Cells
Cited by: 56
Author(s): Sarah Spear, Juliana Candido, Jacqueline McDermott, Cristina Ghirelli, Eleni Maniati, Stephen A. Beers, Frances R. Balkwill, Hemant M. Kocher, Melania Capasso
Software Mentions: 2
Published: over 6 years ago

10.3389/fendo.2017.00253

Culture in Glucose-Depleted Medium Supplemented with Fatty Acid and 3,3′,5-Triiodo-l-Thyronine Facilitates Purification and Maturation of Human Pluripotent Stem Cell-Derived Cardiomyocytes
Cited by: 33
Author(s): Bin Lin, Xianming Lin, Maxine W. Stachel, Elisha Wang, Yan Luo, Joshua M. Lader, Xiaofang Sun, Mario Delmar, Lei Bu
Software Mentions: 2
Published: about 8 years ago

10.3389/fimmu.2020.01388

A Novel α/β Hydrolase Domain Protein Derived From Haemonchus contortus Acts at the Parasite-Host Interface
Cited by: 10
Author(s): Mingmin Lu, Xiaowei Tian, Ai-Ling Tian, Charles Li, Yan Ren, Lixin Xu, Xiaoling Song, Xiangrui Li
Software Mentions: 2
Published: over 5 years ago

10.3389/fimmu.2021.723683

Mitofusin 2 Deficiency Causes Pro-Inflammatory Effects in Human Primary Macrophages
Cited by: 6
Author(s): Vera Khodzhaeva, Yannick Schreiber, Gerd Geißlinger, Ralf P. Brandes, Bernhard Brüne, Dmitry Namgaladze
Software Mentions: 2
Published: about 4 years ago

10.3389/fcimb.2017.00475

Predictable, Tunable Protein Production in Salmonella for Studying Host-Pathogen Interactions
Cited by: 14
Author(s): Kendal G. Cooper, Audrey Chong, Tregei Starr, Ciaran E. Finn, Olivia Steele‐Mortimer
Software Mentions: 2
Published: almost 8 years ago

10.3389/fcimb.2018.00145

The Loss of Expression of a Single Type 3 Effector (CT622) Strongly Reduces Chlamydia trachomatis Infectivity and Growth
Cited by: 14
Author(s): Mathilde M. Cossé, Michael L. Barta, Derek J. Fisher, Lena K. Oesterlin, Béatrice Niragire, Stéphanie Perrinet, Gaël A. Millot, P. Scott Hefty, Agathe Subtil
Software Mentions: 2
Published: over 7 years ago

10.1016/j.devcel.2017.01.015

Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development
Cited by: 87
Author(s): Vinay Bulusu, Nicole Prior, Marteinn T. Snaebjornsson, Andreas Kuehne, Katharina F. Sonnen, Jana Kress, Frank Stein, Carsten Schultz, Uwe Sauer, Alexander Aulehla
Software Mentions: 2
Published: almost 9 years ago

10.1016/j.devcel.2019.10.012

A Tug-of-War between Cell Shape and Polarity Controls Division Orientation to Ensure Robust Patterning in the Mouse Blastocyst
Cited by: 51
Author(s): Ritsuya Niwayama, Prachiti Moghe, Yanjun Liu, Dimitri Fabrèges, Frank Buchholz, Matthieu Piel, Takashi Hiiragi
Software Mentions: 2
Published: almost 6 years ago

10.3389/fcimb.2019.00180

Bioactivity of Farnesyltransferase Inhibitors Against Entamoeba histolytica and Schistosoma mansoni
Cited by: 9
Author(s): Alexandra Probst, Trong Duc Nguyen, Nelly El-Sakkary, Danielle Skinner, Brian M. Suzuki, Frederick S. Buckner, Michael H. Gelb, Conor R. Caffrey, Anjan Debnath
Software Mentions: 2
Published: over 6 years ago

10.1016/j.dib.2019.103858

Palynological and X-ray fluorescence (XRF) data of Carnian (Late Triassic) formations from western Hungary
Cited by: 4
Author(s): Viktória Baranyi, Ágnes Rostási, Béla Raucsik, Wolfram M. Kürschner
Software Mentions: 2
Published: over 6 years ago

10.1186/s12915-021-01021-4

Impact of male trait exaggeration on sex-biased gene expression and genome architecture in a water strider
Cited by: 9
Author(s): William Toubiana, David Armisén, Corentin Dechaud, Roberto Arbore, Abderrahman Khila
Software Mentions: 2
Published: over 4 years ago

10.1016/j.devcel.2019.04.003

Reductional Meiosis I Chromosome Segregation Is Established by Coordination of Key Meiotic Kinases
Cited by: 27
Author(s): Stefan Galander, Rachael Barton, Weronika E. Borek, Christos Spanos, David A. Kelly, Daniel Robertson, Juri Rappsilber, Adèle L. Marston
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2021.671756

The 5-Phosphatase SHIP2 Promotes Neutrophil Chemotaxis and Recruitment
Cited by: 3
Author(s): Melina Michael, Barrett L. McCormick, Karen E. Anderson, Utsa Karmakar, Matthieu Vermeren, Stéphane Schurmans, Augustin Amour, Sonja Vermeren
Software Mentions: 2
Published: over 4 years ago

10.3389/fncel.2020.00108

Three-Dimensional Explant Platform for Studies on Choroid Plexus Epithelium
Cited by: 3
Author(s): Natalia Petersen, Lola Torz, Kristian H. R. Jensen, Gertrud Malene Hjortø, Katja Spieß, Mette M. Rosenkilde
Software Mentions: 2
Published: over 5 years ago

10.3389/fimmu.2017.00932

Tumor Necrosis Factor (TNF) Bioactivity at the Site of an Acute Cell-Mediated Immune Response Is Preserved in Rheumatoid Arthritis Patients Responding to Anti-TNF Therapy
Cited by: 12
Author(s): Rachel Byng-Maddick, Chris Turner, Gabriele Pollara, Matthew Ellis, Naomi Guppy, Lucy Bell, Michael R. Ehrenstein, Mahdad Noursadeghi
Software Mentions: 2
Published: over 8 years ago

10.3389/fimmu.2018.02409

Intestinal CD103+CD11b+ cDC2 Conventional Dendritic Cells Are Required for Primary CD4+ T and B Cell Responses to Soluble Flagellin
Cited by: 21
Author(s): Adriana Flores‐Langarica, Charlotte N. Cook, Katarzyna Müller Luda, Emma Persson, Jennifer L. Marshall, Nonantzin Beristain‐Covarrubias, Juan Carlos Yam‐Puc, Madelene W Dahlgren, Jenny Persson, Satoshi Uematsu, Shizuo Akira, Ian R. Henderson, Bengt Johansson Lindbom, William W. Agace, Adam F. Cunningham
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2018.03038

Intracellular pHluorin as Sensor for Easy Assessment of Bacteriocin-Induced Membrane-Damage in Listeria monocytogenes
Cited by: 13
Author(s): Peter Crauwels, Leonie Schäfer, Dominik Weixler, Nadav Bar, Dzung B. Diep, Christian U. Riedel, Gerd M. Seibold
Software Mentions: 2
Published: almost 7 years ago

10.3390/biomedicines8090350

Mitochondrial Transfer by Human Mesenchymal Stromal Cells Ameliorates Hepatocyte Lipid Load in a Mouse Model of NASH
Cited by: 17
Author(s): Mei-Ju Hsu, Isabel Karkossa, Ingo Schäfer, Madlen Christ, H Kühne, Kristin Schubert, Ulrike Rolle-Kampczyk, Stefan Kalkhof, Sandra Nickel, Peter Seibel, Martin von Bergen, Bruno Christ
Software Mentions: 2
Published: about 5 years ago

10.1038/s42003-021-02279-8

Deletion of the diabetes candidate gene Slc16a13 in mice attenuates diet-induced ectopic lipid accumulation and insulin resistance
Cited by: 6
Author(s): Tina Schumann, Jörg König, Christian von Loeffelholz, Daniel F. Vatner, Rachel J. Perry, Michel Bernier, Jason Chami, Christine Henke, Anica Kurzbach, Nermeen N. El-Agroudy, Diana M. Willmes, Dominik Pesta, Rafael de Cabo, John Sullivan, Eric J. Simon, Gerald I. Shulman, Bradford S. Hamilton, Andreas L. Birkenfeld
Software Mentions: 2
Published: over 4 years ago

10.1038/s42003-021-02404-7

Essential roles of plexin-B3+ oligodendrocyte precursor cells in the pathogenesis of Alzheimer’s disease
Cited by: 5
Author(s): Naomi Nihonmatsu-Kikuchi, Xiu-Jun Yu, Yoshiki Matsuda, Nobuyuki Ozawa, Taeko Ito, Kazuhito Satou, Tadashi Kaname, Yasushi Iwasaki, Akio Akagi, Mari Yoshida, Shuta Toru, Katsuíku Hirokawa, Akihiko Takashima, Masato Hasegawa, Toshiki Uchihara, Yoshitaka Tatebayashi
Software Mentions: 2
Published: over 4 years ago

10.3389/fnins.2019.01033

Enzymatic Digestion of Hyaluronan-Based Brain Extracellular Matrix in vivo Can Induce Seizures in Neonatal Mice
Cited by: 12
Author(s): Alena Balashova, Vladimir Pershin, Olga Zaborskaya, Natalia Tkachenko, Andrey Mironov, Evgenii L. Guryev, Л. К. Курбатов, Murat R. Gainullin, И.В. Мухина
Software Mentions: 2
Published: about 6 years ago

10.3389/fnins.2021.629067

Recent Trends and Perspectives in Cerebral Organoids Imaging and Analysis
Cited by: 11
Author(s): Clara Brémond Martin, Camille Simon Chane, Cédric Clouchoux, Aymeric Histace
Software Mentions: 2
Published: over 4 years ago

10.1242/bio.045674

The ventral epithelium of <i>Trichoplax adhaerens</i> deploys in distinct patterns cells that secrete digestive enzymes, mucus or diverse neuropeptides
Cited by: 24
Author(s): Tatiana D. Mayorova, Katherine Hammar, Christine A. Winters, Thomas S. Reese, Carolyn L. Smith
Software Mentions: 2
Published: almost 7 years ago

10.3389/fphys.2020.563372

Cadherin-11 Is Required for Neural Crest Specification and Survival
Cited by: 18
Author(s): Subrajaa Manohar, Alberto Camacho‐Magallanes, Camilo V Echeverria, Crystal D. Rogers
Software Mentions: 2
Published: about 5 years ago

10.3389/fpls.2021.675981

GR24, A Synthetic Strigolactone Analog, and Light Affect the Organization of Cortical Microtubules in Arabidopsis Hypocotyl Cells
Cited by: 5
Author(s): Yuliya Krasylenko, George Komis, Sofiia Hlynska, Tereza Vavrdová, Miroslav Ovečka, Tomáš Pospíšil, Jozef Šamaj
Software Mentions: 2
Published: over 4 years ago

10.3389/fpls.2017.01872

Morphology, Carbohydrate Distribution, Gene Expression, and Enzymatic Activities Related to Cell Wall Hydrolysis in Four Barley Varieties during Simulated Malting
Cited by: 23
Author(s): Natalie S. Betts, Laura G. Wilkinson, Shi F. Khor, Neil J. Shirley, Finn Lok, Birgitte Skadhauge, Rachel A. Burton, Geoffrey B. Fincher, Helen Collins
Software Mentions: 2
Published: about 8 years ago

10.1038/s42003-021-02322-8

Testicular somatic cell-like cells derived from embryonic stem cells induce differentiation of epiblasts into germ cells
Cited by: 6
Author(s): Holly M. Rore, Nicholas Owen, Raúl E. Piña-Aguilar, Kevin Docherty, Ryohei Sekido
Software Mentions: 2
Published: over 4 years ago

10.3390/cells10040838

Aquaglyceroporin-3’s Expression and Cellular Localization Is Differentially Modulated by Hypoxia in Prostate Cancer Cell Lines
Cited by: 5
Author(s): Andreia de Almeida, Dimitris Parthimos, Holly Dew, Oliver S. Smart, Marie Wiltshire, Rachel J. Errington
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.ppat.1000953

Cryptococcal Cell Morphology Affects Host Cell Interactions and Pathogenicity
Cited by: 291
Author(s): Laura H. Okagaki, Anna K. Strain, Judith N. Nielsen, Caroline Charlier, Nicholas J. Baltes, Fabrice Chrétien, Joseph Heitman, Françoise Dromer, Kirsten Nielsen
Software Mentions: 2
Published: over 15 years ago

10.3390/cells9020355

Impaired Nuclear Export of the Ribonucleoprotein Complex and Virus-Induced Cytotoxicity Combine to Restrict Propagation of the A/Duck/Malaysia/02/2001 (H9N2) Virus in Human Airway Cells
Cited by: 2
Author(s): Sriram Kumar, David Yeo, Nisha Muralidharan, Soak Kuan Lai, Cathlyn Tong, Boon Huan Tan, Richard J. Sugrue
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.ppat.1006354

A second wave of Salmonella T3SS1 activity prolongs the lifespan of infected epithelial cells
Cited by: 42
Author(s): Ciaran E. Finn, Audrey Chong, Kendal G. Cooper, Tregei Starr, Olivia Steele‐Mortimer
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.ppat.1006331

Dual role of the Toxoplasma gondii clathrin adaptor AP1 in the sorting of rhoptry and microneme proteins and in parasite division
Cited by: 37
Author(s): Kannan Venugopal, Elisabeth Werkmeister, Nicolas Barois, Jean‐Michel Saliou, Anaïs Poncet, Ludovic Huot, Fabien Sindikubwabo, Mohamed‐Ali Hakimi, Gordon Langsley, Frank Lafont, Sabrina Marion
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.ppat.1008361

VCAM1/VLA4 interaction mediates Ly6Clow monocyte recruitment to the brain in a TNFR signaling dependent manner during fungal infection
Cited by: 21
Author(s): Dong Sun, Mingshun Zhang, Peng Sun, Gongguan Liu, Ashley B. Strickland, Yanli Chen, Yong Fu, Mohammed Yosri, Meiqing Shi
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.ppat.1008650

A Toxoplasma gondii patatin-like phospholipase contributes to host cell invasion
Cited by: 10
Author(s): Sarah K. Wilson, Justine Heckendorn, Bruno Martorelli Di Genova, Lindsey L. Koch, Peggy J. Rooney, Naomi S. Morrissette, Maryse Lebrun, Laura J. Knoll
Software Mentions: 2
Published: over 5 years ago

10.3390/cells10010081

Extracellular DNA Correlates with Intestinal Inflammation in Chemically Induced Colitis in Mice
Cited by: 18
Author(s): Martin Marônek, Barbora Gromová, Róbert Lipták, Barbora Konečná, Michal Pastorek, Barbora Čechová, Mária Haršányová, Jaroslav Budiš, Dávid Smoľak, Ján Radvánszky, Tomáš Szemeš, Jana Harsányiová, Alžbeta Trančiková, Roman Gardlík
Software Mentions: 2
Published: almost 5 years ago

10.1007/s00401-020-02148-4

Diverse, evolving conformer populations drive distinct phenotypes in frontotemporal lobar degeneration caused by the same MAPT-P301L mutation
Cited by: 17
Author(s): Nathalie Daude, Chae Kim, Sang Gyun Kang, Ghazaleh Eskandari‐Sedighi, Tracy Haldiman, Jing Yang, Shelaine C. Fleck, Erik Gomez‐Cardona, Zhuang Zhuang Han, Sergi Borrego‐Écija, Serene Wohlgemuth, Olivier Julien, Holger Wille, Laura Molina‐Porcel, Ellen Gelpí, Jiri Safar, David Westaway
Software Mentions: 2
Published: over 5 years ago

10.1007/s00412-018-0671-z

Three-dimensional analysis of nuclear heterochromatin distribution during early development in the rabbit
Cited by: 6
Author(s): Amélie Bonnet-Garnier, Kiên Kiêu, Tiphaine Aguirre-Lavin, Krisztina Tar, Pierre Flores, Zichuan Liu, Nathalie Peynot, Martine Chebrout, András Dinnyés, Véronique Duranthon, Nathalie Beaujean
Software Mentions: 2
Published: over 7 years ago

10.1098/rspb.2018.2400

Fluctuating selection strength and intense male competition underlie variation and exaggeration of a water strider's male weapon
Cited by: 9
Author(s): William Toubiana, Abderrahman Khila
Software Mentions: 2
Published: over 6 years ago

10.1186/s12958-018-0357-7

Docosahexaenoic acid (DHA) effects on proliferation and steroidogenesis of bovine granulosa cells
Cited by: 25
Author(s): Virginie Maillard, Alice Desmarchais, Maëva Durcin, Svetlana Uzbekova, Sébastien Elis
Software Mentions: 2
Published: over 7 years ago

10.21203/rs.3.rs-153628/v1

SARS-CoV-2 infects blood monocytes to activate NLRP3 and AIM2 inflammasomes, pyroptosis and cytokine release
Cited by: 31
Author(s): Caroline Junqueira, Ângela C. Crespo, Shahin Ranjbar, Mercedes Lewandrowski, Jacob Ingber, Luna Barrôco de Lacerda, Blair A. Parry, Sagi Ravid, Sarah A. Clark, Felicia Ho, Setu M. Vora, Valerie Leger, Caroline Beakes, Justin D. Margolin, Nicole Russell, Kyle R. Kays, Lee Gehrke, Upasana Das Adhikari, Lauren A. Henderson, Erin Janssen, Deborah Kwon, Chris Sander, Jonathan Abraham, Michael R. Filbin, Marcia B. Goldberg, Hao Wu, Gautam Mehta, Steven Bell, Anne E. Goldfeld, Judy Lieberman
Software Mentions: 2
Published: about 4 years ago

10.1126/sciadv.abb3567

Forward genetics identifies a novel sleep mutant with sleep state inertia and REM sleep deficits
Cited by: 13
Author(s): Gareth Banks, Mathilde C. C. Guillaumin, Ines Heise, Petrina Lau, Minghui Yin, Nora Bourbia, Carlos Aguilar, Michael R. Bowl, Chris Esapa, L. M. Brown, Sibah Hasan, Erica Tagliatti, Elizabeth Nicholson, Rasneer S. Bains, Sara Wells, Vladyslav V. Vyazovskiy, Kirill E. Volynski, Stuart N. Peirson, Patrick M. Nolan
Software Mentions: 2
Published: about 5 years ago

10.3389/fncel.2018.00020

Developmental Changes in HCN Channel Modulation of Neocortical Layer 1 Interneurons
Cited by: 8
Author(s): A.S. Bohannon, John J. Hablitz
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41422-018-0080-0

STAT3 associates with vacuolar H+-ATPase and regulates cytosolic and lysosomal pH
Cited by: 74
Author(s): Bin Liu, Johan Palmfeldt, Lin Lin, Alexandria Colaço, Kim Katrine Bjerring Clemmensen, Jinrong Huang, Fengping Xu, Xin Liu, Kenji Maeda, Yonglun Luo, Marja Jäättelä
Software Mentions: 2
Published: about 7 years ago

10.1186/1741-7007-12-24

Initiating a regenerative response; cellular and molecular features of wound healing in the cnidarian Nematostella vectensis
Cited by: 101
Author(s): Timothy Q. DuBuc, Nikki Traylor-Knowles, Mark Q. Martindale
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-018-27548-1

Cell wall associated protein TasA provides an initial binding component to extracellular polysaccharides in dual-species biofilm
Cited by: 22
Author(s): Danielle Duanis-Assaf, Tal Duanis‐Assaf, Gang Zeng, Rikke Louise Meyer, Meital Reches, Doron Steinberg, Moshe Shemesh
Software Mentions: 2
Published: over 7 years ago

10.1186/s13058-019-1130-3

The lncRNA MIR2052HG regulates ERα levels and aromatase inhibitor resistance through LMTK3 by recruiting EGR1
Cited by: 33
Author(s): Junmei Cairns, James N. Ingle, Krishna R. Kalari, Lois E. Shepherd, Michiaki Kubo, Matthew P. Goetz, Richard M. Weinshilboum, Liewei Wang
Software Mentions: 2
Published: over 6 years ago

10.1007/s00441-018-2793-2

Expression of trans-membrane serine protease 3 (TMPRSS3) in the human organ of Corti
Cited by: 13
Author(s): Wei Liu, Hubert Löwenheim, Peter A. Santi, Rudolf Glueckert, Anneliese Schrott‐Fischer, Helge Rask‐Andersen
Software Mentions: 2
Published: over 7 years ago

10.1111/acel.12835

Targeting the phospholipase A2 receptor ameliorates premature aging phenotypes
Cited by: 28
Author(s): Audrey Griveau, Clotilde Wiel, Benjamin Le Calvé, Dorian V. Ziegler, Sophia Djebali, Marine Warnier, Nadine Martin, Jacqueline Marvel, David Vindrieux, Martin O. Bergö, David Bernard
Software Mentions: 2
Published: about 7 years ago

10.1186/1471-2105-15-S16-S6

FMAj: a tool for high content analysis of muscle dynamics in Drosophila metamorphosis
Cited by: 9
Author(s): Yadav Kuleesha, Wee Choo Puah, Feng Lin, Martin Wasser
Software Mentions: 2
Published: almost 11 years ago

10.1038/s41598-018-32530-y

The Cytotoxic Necrotizing Factor of Yersinia pseudotuberculosis (CNFy) is Carried on Extracellular Membrane Vesicles to Host Cells
Cited by: 14
Author(s): Ajay K. Monnappa, Wasimul Bari, Jeong Kon Seo, Robert J. Mitchell
Software Mentions: 2
Published: about 7 years ago

10.1038/s41422-019-0216-x

Sodium oligomannate therapeutically remodels gut microbiota and suppresses gut bacterial amino acids-shaped neuroinflammation to inhibit Alzheimer’s disease progression
Cited by: 628
Author(s): Xinyi Wang, Guangqiang Sun, Teng Feng, Jing Zhang, Xun Huang, Tao Wang, Zuoquan Xie, Xingkun Chu, Jun Yang, Huan Wang, Shuaishuai Chang, Yanxue Gong, Lingfei Ruan, Guanqun Zhang, Siyuan Yan, Li-Li Wen, Chen Du, Da Yang, Qingli Zhang, Feifei Lin, Jia Liu, Haiyan Zhang, Changrong Ge, Shifu Xiao, Jian Ding, Meiyu Geng
Software Mentions: 2
Published: about 6 years ago

10.1016/j.celrep.2021.109700

Multiplexed drug-based selection and counterselection genetic manipulations in Drosophila
Cited by: 9
Author(s): Nick Matinyan, Mansi Karkhanis, Yezabel Gonzalez, Antrix Jain, Alexander B. Saltzman, Anna Malovannaya, Alejandro Sarrión-Perdigones, Herman A. Dierick, Koen J. T. Venken
Software Mentions: 2
Published: about 4 years ago

10.1186/s40478-018-0654-6

Optic nerve thinning and neurosensory retinal degeneration in the rTg4510 mouse model of frontotemporal dementia
Cited by: 15
Author(s): Ian F. Harrison, Rozalind Whitaker, Pietro Maria Bertelli, James M. O’Callaghan, Lajos Csincsik, Martina Bocchetta, Da Ma, Alice Fisher, Zeshan Ahmed, Tracey K. Murray, Michael O’Neill, Jonathan D. Rohrer, Mark F. Lythgoe, Imre Lengyel
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-43328-x

ALK4/5-dependent TGF-β signaling contributes to the crosstalk between neurons and microglia following axonal lesion
Cited by: 8
Author(s): Antonella Raffo-Romero, Tanina Arab, Christelle Van Camp, Quentin Lemaire, Maxence Wisztorski, Julien Franck, Soulaimane Aboulouard, Françoise Le Marrec-Croq, Pierre-Éric Sautière, Jacopo Vizioli, Michel Salzet, Christophe Lefebvre
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-48107-2

Label-free assessment of pre-implantation embryo quality by the Fluorescence Lifetime Imaging Microscopy (FLIM)-phasor approach
Cited by: 26
Author(s): Ning Ma, Nabora Reyes de Mochel, Paula Duyen Pham, Tae Yeon Yoo, Ken W. Y. Cho, Michelle A. Digman
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-019-52655-y

Direct, gabapentin-insensitive interaction of a soluble form of the calcium channel subunit α2δ-1 with thrombospondin-4
Cited by: 12
Author(s): Ehab El‐Awaad, Galyna Pryymachuk, Cora Fried, Jan Matthes, Jörg Isensee, Tim Hucho, Wolfram F. Neiss, Mats Paulsson, Stefan Herzig, Frank Zaucke, Markus Pietsch
Software Mentions: 2
Published: almost 6 years ago

10.3390/cells10061405

Hydroquinone Induces NLRP3-Independent IL-18 Release from ARPE-19 Cells
Cited by: 4
Author(s): Niina Bhattarai, Eveliina Korhonen, Yashavanthi Mysore, Kai Kaarniranta, Anu Kauppinen
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0095248

The Kinematics of Cytotoxic Lymphocytes Influence Their Ability to Kill Target Cells
Cited by: 20
Author(s): Purnima Bhat, Graham R. Leggatt, Klaus I. Matthaei, Ian H. Frazer
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0180871

Can single molecule localization microscopy be used to map closely spaced RGD nanodomains?
Cited by: 9
Author(s): Mahdie Mollazade, Thibault Tabarin, Philip R. Nicovich, Alexander H. Soeriyadi, Daniel J. Nieves, J. Justin Gooding, Katharina Gaus
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0064426

Crystal Structure of Crataeva tapia Bark Protein (CrataBL) and Its Effect in Human Prostate Cancer Cell Lines
Cited by: 19
Author(s): Rodrigo S. Ferreira, Dongwen Zhou, Joana Gasperazzo Ferreira, Mariana Cristina Cabral Silva, Rosemeire A. Silva-Lucca, Reinhard Mentele, Edgar Julian Paredes‐Gamero, Thiago Carlos Bertolin, Maria Tereza dos Santos Correia, Patrícia Maria Guedes Paiva, Alla Gustchina, Alexander Wlodawer, Maria Luíza Vilela Oliva
Software Mentions: 2
Published: over 12 years ago

10.1242/bio.039115

Quantitative analysis of the ThrbCRM1-centered gene regulatory network
Cited by: 4
Author(s): Benjamin Souferi, Mark M. Emerson
Software Mentions: 2
Published: almost 7 years ago

10.26508/lsa.201900620

Quantification of cristae architecture reveals time-dependent characteristics of individual mitochondria
Cited by: 22
Author(s): Mayuko Segawa, Dane M. Wolf, Nan W. Hultgren, David S. Williams, Alexander M. van der Bliek, David B. Shackelford, Marc Liesa, Orian S. Shirihai
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0235360

Sodium–calcium exchanger 1 is the key molecule for urinary potassium excretion against acute hyperkalemia
Cited by: 6
Author(s): Wakana Shoda, Naohiro Nomura, Fumiaki Ando, Hideaki Tagashira, Takahiro Iwamoto, Akihito Ohta, Kiyoshi Isobe, Takayasu Mori, Koichiro Susa, Eisei Sohara, Tatemitsu Rai, Shinichi Uchida
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0082083

Dendritic Branch Intersections Are Structurally Regulated Targets for Efficient Axonal Wiring and Synaptic Clustering
Cited by: 3
Author(s): Monika Pinchas, Danny Baranes
Software Mentions: 2
Published: almost 12 years ago

10.26508/lsa.202000840

Harnessing reaction-based probes to preferentially target pancreatic β-cells and β-like cells
Cited by: 9
Author(s): Sevim Kahraman, Debasish Manna, Ercument Dirice, Basudeb Maji, Jonnell Small, Beate Wagner, Amit Choudhary
Software Mentions: 2
Published: almost 5 years ago

10.1167/iovs.62.6.20

The Predictive Role of Thyroid Hormone Levels for Early Diabetic Retinal Changes in Experimental Rat and Human Diabetes
Cited by: 2
Author(s): Anna Énzsöly, Rozina Ida Hajdú, Zsolt Turóczi, Irén Szalai, Erika Tátrai, Fanni Pálya, Zoltán Zsolt Nagy, Csaba Mátyás, Attila Oláh, Tamás Radovits, Klaudia Szabó, Bulcsú Dékány, Arnold Szabó, Ákos Kusnyerik, Petra Soltész, Dániel Sándor Veres, Anikó Somogyi, Gábor Márk Somfai, Ákos Lukáts
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0235691

A pilot study investigating the effects of voluntary exercise on capillary stalling and cerebral blood flow in the APP/PS1 mouse model of Alzheimer’s disease
Cited by: 15
Author(s): Kaja Falkenhain, Nancy E. Ruiz-Uribe, Mohammad Haft‐Javaherian, Muhammad Ali, Stall Catchers, Pietro Michelucci, Chris B. Schaffer, Oliver Bracko
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0251273

Catalysis of the electrochemical oxygen reduction reaction (ORR) by animal and human cells
Cited by: 3
Author(s): Simon Guette-Marquet, Christine Roques, Alain Bergel
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0215908

Wild-type and SAMP8 mice show age-dependent changes in distinct stem cell compartments of the interfollicular epidermis
Cited by: 8
Author(s): Gopakumar Changarathil, Karina Ramírez, Hiroko Isoda, Aiko Sada, Hiromi Yanagisawa
Software Mentions: 2
Published: over 6 years ago

10.7554/eLife.13964

ERG signaling in prostate cancer is driven through PRMT5-dependent methylation of the Androgen Receptor
Cited by: 57
Author(s): Zineb Mounir, Joshua M. Korn, Thomas Westerling, Fallon Lin, C.A. Kirby, Markus Schirle, Gregg McAllister, Greg Hoffman, Nadire Ramadan, Anke Hartung, Feng Yuan, D. Randal Kipp, Christopher Quinn, Michelle Fodor, Jason R. Baird, Marie Schoumacher, Ronald A. Meyer, James Deeds, Gilles Buchwalter, Travis Stams, Nicholas Keen, William R. Sellers, Myles Brown, Raymond Pagliarini
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0251474

Analysis of blood parameters and molecular endometrial markers during early reperfusion in two ovine models of uterus transplantation
Cited by: 3
Author(s): Marie Carbonnel, Nathalie Cornet, Aurélie Revaux, Angéline Favre-Inhofer, Laurent Galio, Mariam Raliou, Anne Couturier-Tarrade, Corinne Giraud-Delville, Gilles Charpigny, Valérie Gelin, Olivier Dubois, Barbara Hersant, Romain Bosc, Raphaël Coscas, François Vialard, Pascale Chavatte‐Palmer, Christophe Richard, Olivier Sandra, Jean Marc Ayoubi
Software Mentions: 2
Published: over 4 years ago

10.1186/s40478-019-0871-7

Synapse alterations precede neuronal damage and storage pathology in a human cerebral organoid model of CLN3-juvenile neuronal ceroid lipofuscinosis
Cited by: 38
Author(s): Gemma Gomez-Giro, Jonathan Arias, Javier Jarazo, Dagmar Zeuschner, Muhammad Ali, Nina Possemis, Silvia Bolognin, Rashi Halder, Christian Jäger, Willemijn F. E. Kuper, Peter M. van Hasselt, Holm Zaehres, Antonio del Sol, Herman van der Putten, Hans R. Schöler, Jens Christian Schwamborn
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0148379

BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models
Cited by: 18
Author(s): Cemal Cagatay Bilgin, Gerald Fontenay, Qingsu Cheng, Hang Chang, Ju Han, Bahram Parvin
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0246244

EZH2 inhibition decreases neuroblastoma proliferation and in vivo tumor growth
Cited by: 11
Author(s): Laura V. Bownes, Arthur Robin Williams, Raoud Marayati, Laura L. Stafman, Hooper R. Markert, Colin H. Quinn, Nikita Wadhwani, Jamie M. Aye, Jerry E. Stewart, Karina J. Yoon, Elizabeth Mroczek‐Musulman, Elizabeth A. Beierle
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0066918

Effect of Cell Shape and Dimensionality on Spindle Orientation and Mitotic Timing
Cited by: 16
Author(s): Mirren Charnley, Fabian Anderegg, René Holtackers, Marcus Textor, Patrick Meraldi
Software Mentions: 2
Published: over 12 years ago

10.3390/cells8101146

Tubulin-Dependent Transport of Connexin-36 Potentiates the Size and Strength of Electrical Synapses
Cited by: 12
Author(s): Cherie Alicia Brown, Cristiane del Corsso, Christiane Zoidl, Logan W. Donaldson, David C. Spray, Georg Zoidl
Software Mentions: 2
Published: about 6 years ago

10.3390/ijms22084263

Targeting of Deregulated Wnt/β-Catenin Signaling by PRI-724 and LGK974 Inhibitors in Germ Cell Tumor Cell Lines
Cited by: 9
Author(s): Silvia Schmidtova, Katarína Kalavska, Veronika Lišková, Jana Plavá, Svetlana Miklikova, Lucia Kučerová, Miroslava Matúšková, Lucia Rojikova, Zuzana Čierna, Adriana L. Rogozea, Heiko König, Costantine Albany, Michal Mego, Michal Chovanec
Software Mentions: 2
Published: over 4 years ago

10.3390/ijms22158241

Biocontrol of Biofilm Formation: Jamming of Sessile-Associated Rhizobial Communication by Rhodococcal Quorum-Quenching
Cited by: 8
Author(s): Yvann Bourigault, Sophie Rodrigues, Alexandre Crépin, Andréa Chane, Laure Taupin, Mathilde Bouteiller, Charly Dupont, Annabelle Mérieau, Yoan Konto‐Ghiorghi, Amine M. Boukerb, Marie Turner, Céline Hamon, Alain Dufour, Corinne Barbey, Xavier Latour
Software Mentions: 2
Published: over 4 years ago

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