pypi: Zen | Projects | Ecosyste.ms: Papers

10.1074/jbc.M117.784629

The transcription factor Pax6 is required for pancreatic β cell identity, glucose-regulated ATP synthesis, and Ca2+ dynamics in adult mice
Cited by: 48
Author(s): Ryan K. Mitchell, Marie‐Sophie Nguyen‐Tu, Pauline Chabosseau, Rebecca Callingham, Timothy J. Pullen, Rebecca Cheung, Isabelle Leclerc, David J. Hodson, Guy A. Rutter
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-018-30781-3

Integrative epigenomic analysis in differentiated human primary bronchial epithelial cells exposed to cigarette smoke
Cited by: 11
Author(s): Kimberly Glass, Derek Thibault, Feng Guo, Joseph F. Mitchel, Brandon Pham, Weiliang Qiu, Yan Li, Zhiqiang Jiang, Peter J. Castaldi, Edwin K. Silverman, Benjamin A. Raby, Jin‐Ah Park, Guo‐Cheng Yuan, Xiaobo Zhou
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-019-43517-8

Chemosynthetic ectosymbionts associated with a shallow-water marine nematode
Cited by: 14
Author(s): Laure Bellec, Marie-Anne Cambon-Bonavita, Stéphane Hourdez, Mohamed Jebbar, Aurélie Tasiemski, Lucile Durand, Nicolas Gayet, Daniela Zeppilli
Software Mentions: 3
Published: over 5 years ago

10.1038/s42003-019-0336-3

Mesenchymal actomyosin contractility is required for androgen-driven urethral masculinization in mice
Cited by: 12
Author(s): Alvin R. Acebedo, Kentaro Suzuki, Shinjiro Hino, Mellissa C. Alcantara, Yuki Sato, Hisashi Haga, Ken Matsumoto, Mitsuyoshi Nakao, Kenji Shimamura, Takeo Tanaka, Naomi Nakagata, Shinichi Miyagawa, Ryuichi Nishinakamura, Robert S. Adelstein, Gen Yamada
Software Mentions: 3
Published: over 5 years ago

10.3389/fncel.2020.00123

Cell-Specific Transcriptional Responses to Heat Shock in the Mouse Utricle Epithelium
Cited by: 8
Author(s): Erica Sadler, Matthew Ryals, Lindsey May, Daniel Martin, Nora C. Welsh, Erich T. Boger, Robert J. Morell, Ronna Hertzano, Lisa L. Cunningham
Software Mentions: 3
Published: over 4 years ago

10.1242/dev.169367

Distal-less activates butterfly eyespots consistent with a reaction diffusion process
Cited by: 53
Author(s): Heidi Connahs, Sham Tlili, Jelle van Creij, Tricia Y. J. Loo, Tirtha Das Banerjee, Timothy E. Saunders, Antónia Monteiro
Software Mentions: 3
Published: almost 6 years ago

10.1038/s42003-020-01582-0

Curbing gastrointestinal infections by defensin fragment modifications without harming commensal microbiota
Cited by: 4
Author(s): Louis Koeninger, Lisa Osbelt, Anne Berscheid, Judith Wendler, Jürgen Berger, Katharina Hipp, Till Robin Lesker, Marina C. Pils, Nisar P. Malek, Benjamin Anderschou Holbech Jensen, Heike Brötz‐Oesterhelt, Till Strowig, Jan Wehkamp
Software Mentions: 3
Published: almost 4 years ago

10.3389/fnins.2018.00573

Detection and Distinction of Mild Brain Injury Effects in a Ferret Model Using Diffusion Tensor MRI (DTI) and DTI-Driven Tensor-Based Morphometry (D-TBM)
Cited by: 15
Author(s): Elizabeth Hutchinson, Susan C. Schwerin, Kryslaine L. Radomski, Neda Sadeghi, Michal E. Komlosh, M. Okan İrfanoğlu, Sharon L. Juliano, Carlo Pierpaoli
Software Mentions: 3
Published: over 6 years ago

10.3390/antibiotics9100715

Aureolic Acid Group of Agents as Potential Antituberculosis Drugs
Cited by: 2
Author(s): Julia Bespyatykh, Dmitry Bespiatykh, Maja V. Malakhova, Ksenia M. Klimina, Andrey Bespyatykh, Anna M. Varizhuk, Anna N. Tevyashova, Tatiana A Nikolenko, Galina E. Pozmogova, Elena N. Ilina, Egor Shitikov
Software Mentions: 3
Published: about 4 years ago

10.3389/fnmol.2017.00304

The Molecular Fingerprint of Dorsal Root and Trigeminal Ganglion Neurons
Cited by: 83
Author(s): Douglas M. Lopes, Franziska Denk, Stephen B. McMahon
Software Mentions: 3
Published: about 7 years ago

10.1016/j.cub.2020.10.025

The Proteomic Landscape of Centromeric Chromatin Reveals an Essential Role for the Ctf19CCAN Complex in Meiotic Kinetochore Assembly
Cited by: 11
Author(s): Weronika E. Borek, Nadine Vincenten, Eris Duro, Vasso Makrantoni, Christos Spanos, Krishna K. Sarangapani, Flávia de Lima Alves, David A. Kelly, Charles L. Asbury, Juri Rappsilber, Adèle L. Marston
Software Mentions: 3
Published: almost 4 years ago

10.3390/cells9030748

The S100B Inhibitor Pentamidine Ameliorates Clinical Score and Neuropathology of Relapsing—Remitting Multiple Sclerosis Mouse Model
Cited by: 23
Author(s): Gabriele Di Sante, Susanna Amadio, Beatrice Sampaolese, Maria Elisabetta Clementi, Mariagrazia Valentini, Cinzia Volonté, Patrizia Casalbore, Francesco Ria, Fabrizio Michetti
Software Mentions: 3
Published: over 4 years ago

10.1093/molbev/msz105

Altered Localization of Hybrid Incompatibility Proteins in Drosophila
Cited by: 8
Author(s): Jacob C. Cooper, A. Lukacs, Shelley Reich, Tamás Schauer, Axel Imhof, Nitin Phadnis
Software Mentions: 3
Published: over 5 years ago

10.1016/j.celrep.2019.04.113

Molecular Logic of Spinocerebellar Tract Neuron Diversity and Connectivity
Cited by: 33
Author(s): Min Won Baek, Vilas Menon, Thomas M. Jessell, Adam W. Hantman, Jeremy S. Dasen
Software Mentions: 3
Published: over 5 years ago

10.1128/mSphere.00207-17

The Effector TepP Mediates Recruitment and Activation of Phosphoinositide 3-Kinase on Early Chlamydia trachomatis Vacuoles
Cited by: 27
Author(s): Victoria K. Carpenter, Yi-Shan Chen, Lee Dolat, Raphael H. Valdivia
Software Mentions: 3
Published: about 7 years ago

10.1016/j.mcpro.2021.100125

Affinity Proteomics and Deglycoproteomics Uncover Novel EDEM2 Endogenous Substrates and an Integrative ERAD Network
Cited by: 6
Author(s): Cristian V. A. Munteanu, Gabriela Chirițoiu, Marioara Chirițoiu, Simona Ghenea, Andrei-José Petrescu, Ștefana M. Petrescu
Software Mentions: 3
Published: almost 4 years ago

10.26508/lsa.202000678

RNA exosome mutations in pontocerebellar hypoplasia alter ribosome biogenesis and p53 levels
Cited by: 16
Author(s): Juliane S. Müller, D T Burns, Helen Griffin, Graeme Raymond Wells, Romance A Zendah, Benjamin Munro, Claudia Schneider, Rita Horvath
Software Mentions: 3
Published: over 4 years ago

10.3389/fimmu.2017.01063

Gut REG3γ-Associated Lactobacillus Induces Anti-inflammatory Macrophages to Maintain Adipose Tissue Homeostasis
Cited by: 16
Author(s): Yugang Huang, Houbao Qi, Zhiqian Zhang, Enlin Wang, Huan Yun, Hui Yan, Xiaomin Su, Yingquan Liu, Zenzen Tang, Yuan Gao, Wencong Shang, Zhou Jiang, Tianze Wang, Yongzhe Che, Yuan Zhang, Rongcun Yang
Software Mentions: 3
Published: about 7 years ago

10.1038/s41422-019-0224-x

Sustained Type I interferon signaling as a mechanism of resistance to PD-1 blockade
Cited by: 148
Author(s): Nicolas Jacquelot, Takahiro Yamazaki, María Paula Roberti, Connie P.M. Duong, Miles C. Andrews, Loïc Verlingue, Gladys Ferrere, Sonia Becharef, Marie Vétizou, Romain Daillère, Meriem Messaoudene, David Enot, Gautier Stoll, Stefano Ugel, Ilaria Marigo, Shin Foong Ngiow, Aurélien Marabelle, Armelle Prévost-Blondel, Pierre Olivier Gaudreau, Vancheswaran Gopalakrishnan, Alexander M.M. Eggermont, Paule Opolon, Christophe Klein, Gabriele Madonna, Paolo A. Ascierto, Antje Sucker, Dirk Schadendorf, Mark J. Smyth, Jean Charles Soria, Guido Kroemer, Vincenzo Bronte, Jennifer A. Wargo, Laurence Zitvogel
Software Mentions: 3
Published: about 5 years ago

10.1186/s12915-017-0387-1

Mov10 suppresses retroelements and regulates neuronal development and function in the developing brain
Cited by: 38
Author(s): Geena Skariah, Joseph Seimetz, Miles D. Norsworthy, Monica C. Lannom, Phillip J. Kenny, Mohamed Elrakhawy, Craig Forsthoefel, Jenny Drnevich, Auinash Kalsotra, Stephanie Ceman
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0102968

Role of Polycomb Group Proteins in the DNA Damage Response – A Reassessment
Cited by: 12
Author(s): Hollie Chandler, Harshil Patel, Richard D. Palermo, Sharon Brookes, Nik Matthews, Gordon Peters
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0209856

BioID identifies proteins involved in the cell biology of caveolae
Cited by: 6
Author(s): Carolina Mendoza-Topaz, Ivana Yeow, Kirsi Riento, Benjamin J. Nichols
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pgen.1008646

Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages
Cited by: 26
Author(s): Yufeng Fang, Marco A. Coelho, Haidong Shu, Klaas Schotanus, Bhagya C. Thimmappa, Vikas Yadav, H Chen, Ewa Malc, Jeremy Wang, Piotr A. Mieczkowski, Brent Kronmiller, Brett M. Tyler, Kaustuv Sanyal, Suomeng Dong, Minou Nowrousian, Joseph Heitman
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0224324

Insertional mutagenesis in the zoonotic pathogen Chlamydia caviae
Cited by: 10
Author(s): Kimberly Filcek, Katarina Vielfort, Samada Muraleedharan, Johan Henriksson, Raphael H. Valdivia, Patrik M. Bavoil, Barbara S. Sixt
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pbio.3000739

Increased prostaglandin-D2 in male STAT3-deficient hearts shifts cardiac progenitor cells from endothelial to white adipocyte differentiation
Cited by: 3
Author(s): Elisabeth Stelling, Melanie Ricke‐Hoch, Sergej Erschow, Steve Hoffmann, Anke Bergmann, Maren Heimerl, Stefan Pietzsch, Karin Battmer, Alexandra Haase, Britta Stapel, Michaela Scherr, Jean‐Luc Balligand, Ofer Binah, Denise Hilfiker‐Kleiner
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pgen.1008083

The dPix-Git complex is essential to coordinate epithelial morphogenesis and regulate myosin during Drosophila egg chamber development
Cited by: 6
Author(s): Lucas Dent, Samuel A. Manning, Benjamin Kroeger, Audrey Miller Williams, Abdul Jabbar Saiful Hilmi, Luke Crea, Shu Kondo, Sally Horne‐Badovinac, Kieran F. Harvey
Software Mentions: 3
Published: over 5 years ago

10.3390/ijms21114074

Quantitative Phosphoproteomics Reveals Cell Alignment and Mitochondrial Length Change under Cyclic Stretching in Lung Cells
Cited by: 4
Author(s): Wei Hsuan Wang, Chia‐Lang Hsu, Hsuan‐Cheng Huang, Hsueh‐Fen Juan
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pgen.1008941

A point mutation decouples the lipid transfer activities of microsomal triglyceride transfer protein
Cited by: 16
Author(s): Meredith H. Wilson, Sujith Rajan, Aidan Danoff, Richard White, Monica R. Hensley, Vanessa H. Quinlivan, Rosario Recacha, James H. Thierer, Frederick J. Tan, Elisabeth M Busch-Nentwich, Lloyd W. Ruddock, M. Mahmood Hussain, Steven A. Farber
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pbio.2003389

Aging alters the epigenetic asymmetry of HSC division
Cited by: 94
Author(s): Maria Carolina Florian, Markus Klose, Mehmet Saçma, Jelena Jablanovic, Luke Knudson, Kalpana Nattamai, Gina Marka, Angelika Vollmer, Karin Soller, Vadim Sakk, Nina Cabezas-Wallscheid, Yi Zheng, Medhanie Mulaw, Ingmar Glauche, Hartmut Geiger
Software Mentions: 3
Published: about 6 years ago

10.7554/eLife.40167

Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation
Cited by: 29
Author(s): Lucy LeBlanc, Bumkyu Lee, Andy C Yu, Mijeong Kim, Aparna V Kambhampati, Shannon M Dupont, Davide Seruggia, Byoung U Ryu, Stuart H. Orkin, Jonghwan Kim
Software Mentions: 3
Published: almost 6 years ago

10.7554/eLife.64819

Dynamics of primitive streak regression controls the fate of neuromesodermal progenitors in the chicken embryo
Cited by: 21
Author(s): Charlène Guillot, Yannis Djeffal, Arthur Michaut, Brian Rabe, Olivier Pourquié
Software Mentions: 3
Published: over 3 years ago

10.1002/humu.24127

Loss of CBY1 results in a ciliopathy characterized by features of Joubert syndrome
Cited by: 11
Author(s): Daniel Epting, Lokuliyange D S Senaratne, Elisabeth Ott, Asbjørn Holmgren, Dulika Sumathipala, Selma Mujezinović Larsen, Julia Wallmeier, Diana Bracht, Kari-Anne M Frikstad, Suzanne Crowley, Alma Sikiric, Tuva Barøy, Barbara Käsmann‐Kellner, Eva L. Decker, Christian Decker, Nadine Bachmann, Sebastian Patzke, Ian G. Phelps, Nicholas Katsanis, Rachel H. Giles, Miriam Schmidts, Manuela Zucknick, Soeren S. Lienkamp, Heymut Omran, Erica E. Davis, Dan Doherty, Petter Strømme, Eirik Frengen, Carsten Bergmann, Doriana Misceo
Software Mentions: 3
Published: about 4 years ago

10.1128/mBio.02347-19

Remasking of Candida albicans β-Glucan in Response to Environmental pH Is Regulated by Quorum Sensing
Cited by: 34
Author(s): Fabien Cottier, Sarah Sherrington, Sarah Cockerill, Valentina del Olmo Toledo, Stephen Kissane, Hélène Tournu, Luisa Orsini, Glen E. Palmer, J. Christian Pérez, Rebecca Hall
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pgen.1007273

Ethylene induced plant stress tolerance by Enterobacter sp. SA187 is mediated by 2‐keto‐4‐methylthiobutyric acid production
Cited by: 80
Author(s): Axel de Zélicourt, Lukáš Synek, Maged M. Saad, Hanin S. Alzubaidy, Rewaa S. Jalal, Yakun Xie, Cristina Andrés‐Barrao, Eleonora Rolli, Florence Guérard, Kadarkaraisamy Mariappan, İhsanullah Daur, Jean Colcombet, Moussa Benhamed, Thomas Depaepe, Dominique Van Der Straeten, Heribert Hirt
Software Mentions: 3
Published: over 6 years ago

10.1016/j.celrep.2020.108533

USP15 Deubiquitinase Safeguards Hematopoiesis and Genome Integrity in Hematopoietic Stem Cells and Leukemia Cells
Cited by: 10
Author(s): Paul van den Berk, Cesare Lancini, Michela Serresi, María Pilar Sánchez-Bailón, Danielle Hulsman, Colin C. Pritchard, Ji‐Ying Song, Matthias Jürgen Schmitt, Ellen Tanger, Oliver Popp, Philipp Mertins, Ivo J. Huijbers, Heinz Jacobs, Maarten van Lohuizen, Gaetano Gargiulo, Elisabetta Citterio
Software Mentions: 3
Published: almost 4 years ago

10.1128/mBio.00296-21

Dynamics of the Bacillus subtilis Min System
Cited by: 11
Author(s): Helge Feddersen, Laeschkir Würthner, Erwin Frey, Marc Bramkamp
Software Mentions: 3
Published: over 3 years ago

10.7554/eLife.61409

Differential activation of JAK-STAT signaling reveals functional compartmentalization in Drosophila blood progenitors
Cited by: 23
Author(s): Diana Rodrigues, Yoan Renaud, K. VijayRaghavan, Lucas Waltzer, Maneesha S. Inamdar
Software Mentions: 3
Published: almost 4 years ago

10.1186/1741-7007-10-107

Genomic organization, evolution, and expression of photoprotein and opsin genes in Mnemiopsis leidyi: a new view of ctenophore photocytes
Cited by: 106
Author(s): Christine E. Schnitzler, Kevin Pang, Meghan L. Powers, Adam M. Reitzel, Joseph F. Ryan, David Simmons, Takeshi Tada, Morgan Park, Jyoti Gupta, Shelise Brooks, Robert W. Blakesley, Shozo Yokoyama, Steven H. D. Haddock, Mark Q. Martindale, Andreas D. Baxevanis
Software Mentions: 3
Published: almost 12 years ago

10.1371/journal.pone.0164407

Ligand Independent and Subtype-Selective Actions of Thyroid Hormone Receptors in Human Adipose Derived Stem Cells
Cited by: 13
Author(s): Aleksandra Čvoro, Aleksandar Bajić, Aijun Zhang, Marisa Simon, Igor Golić, Douglas H. Sieglaff, Mirjana Maletić-Savatić, Aleksandra Korać, Paul Webb
Software Mentions: 3
Published: about 8 years ago

10.1186/s13075-021-02588-7

Hyaluronic acid synthesis, degradation, and crosslinking in equine osteoarthritis: TNF-α-TSG-6-mediated HC-HA formation
Cited by: 5
Author(s): Diana C. Fasanello, Jin Su, Siyu Deng, Rose T. Yin, Marshall J. Colville, Joshua M. Berenson, Carolyn M. Kelly, Heather Freer, Alicia Rollins, Bettina Wagner, Felipe Rivas, Adam R. Hall, Elaheh Rahbar, Paul L. DeAngelis, Matthew J. Paszek, Heidi L. Reesink
Software Mentions: 3
Published: over 3 years ago

10.1186/s13024-018-0280-6

The Trem2 R47H Alzheimer’s risk variant impairs splicing and reduces Trem2 mRNA and protein in mice but not in humans
Cited by: 83
Author(s): Xianyuan Xiang, Thomas M. Piers, Benedikt Wefers, Kaichuan Zhu, Anna Mallach, Bettina Brunner, Gernot Kleinberger, Wilbur M. Song, Marco Colonna, Jochen Herms, Wolfgang Wurst, Jennifer M. Pocock, Christian Haass
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-020-64581-5

Formation of an electrical coupling between differentiating cardiomyocytes
Cited by: 10
Author(s): Mihail Slotvitsky, Valeriya Tsvelaya, A.D. Podgurskaya, Konstantin Agladze
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-020-67665-4

Beta-nerve growth factor stimulates spontaneous electrical activity of in vitro embryonic mouse GnRH neurons through a P75 mediated-mechanism
Cited by: 8
Author(s): Caroline Pinet, Renaud Fleurot, Flavie Derouin-Tochon, S.P. de Graaf, Xavier Druart, Guillaume Tsikis, Catherine Taragnat, Ana-Paula Teixeira-Gomes, Valérie Labas, Thierry Moreau, Xavier Cayla, Anne Duittoz
Software Mentions: 3
Published: over 4 years ago

10.1016/j.str.2020.04.010

CCDC61/VFL3 Is a Paralog of SAS6 and Promotes Ciliary Functions
Cited by: 16
Author(s): Takashi Ochi, Valentina Quarantotti, Huawen Lin, Jérôme Jullien, Ivan Rosa e Silva, Francesco Boselli, Deepak D. Barnabas, Christopher M. Johnson, Stephen H. McLaughlin, Stefan Freund, Andrew N. Blackford, Yuu Kimata, Raymond E. Goldstein, Stephen Jackson, Tom L. Blundell, Susan K. Dutcher, Fanni Gergely, M. van Breugel
Software Mentions: 3
Published: over 4 years ago

10.1080/19336896.2019.1615197

Rodent models allow BSE discrimination of goat prions and reveal geographical differences in the biological properties of scrapie
Cited by: 4
Author(s): Laura Pirisinu, Olivier Andréoletti, Frédéric Lantier, Pier Luigi Acutis, S. Acin, Wilfred Goldmann, Theodoros Sklaviadis, Loukia Ekateriniadou, Christine Fast, Penelope Papasavva-Stylianou, Stéphanie Simon, J. Spiropoulol, Umberto Agrimi, J.G. Jacobs, Alex Bossers, Lucien van Keulen, Maria Mazza, Romolo Nonno, J.P.M. Langeveld
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1001328

A Novel Toxoplasma gondii Nuclear Factor TgNF3 Is a Dynamic Chromatin-Associated Component, Modulator of Nucleolar Architecture and Parasite Virulence
Cited by: 36
Author(s): Alejandro Olguin-Lamas, Edwige Madec, Agnès Hovasse, Elisabeth Werkmeister, Isabelle Callebaut, Christian Slomianny, Stéphane Delhaye, Thomas Mouveaux, Christine Schaeffer-Reiss, Alain Van Dorsselaer, Stanislas Tomavo
Software Mentions: 3
Published: over 13 years ago

10.1038/s41597-020-0519-2

Systems biology of acidophile biofilms for efficient metal extraction
Cited by: 7
Author(s): Antoine Buetti‐Dinh, Malte Herold, Stephan Christel, Mohamed El Hajjami, Sören Bellenberg, Olga Ilie, Paul Wilmes, Ansgar Poetsch, Wolfgang Sand, Mario Vera, Igor V. Pivkin, Mark Dopson
Software Mentions: 3
Published: over 4 years ago

10.1186/s12918-015-0155-1

Spatially-resolved metabolic cooperativity within dense bacterial colonies
Cited by: 69
Author(s): John A. Cole, Lars Köhler, Jamila Hedhli, Zaida Luthey‐Schulten
Software Mentions: 3
Published: over 9 years ago

10.1242/jcs.251264

A hub-and-spoke nuclear lamina architecture in trypanosomes
Cited by: 4
Author(s): Norma E. Padilla-Mejía, Luděk Kořený, Jennifer Holden, Marie Vancová, Julius Lukeš, Martin Zoltner, Mark C. Field
Software Mentions: 3
Published: over 3 years ago

10.1242/jcs.183103

Chromatibody, a novel non-invasive molecular tool to explore and manipulate chromatin in living cells
Cited by: 32
Author(s): Denis Jullien, Julien Vignard, Yoann Fedor, Nicolas Béry, Aurélien Olichon, Michèle Crozatier, Marie Erard, Hervé Cassard, Bernard Ducommun, Bernard Salles, Gladys Mirey
Software Mentions: 3
Published: almost 9 years ago

10.1038/srep09207

miRNA in situ hybridization in circulating tumor cells - MishCTC
Cited by: 36
Author(s): Francisco G. Ortega, José A. Lorente, José Luis García Puche, Maria P. Ruiz, Rosario M. Sánchez‐Martín, Diego Pérez, Juan José Díaz‐Mochón, María José Serrano
Software Mentions: 3
Published: over 9 years ago

10.1038/s41398-017-0054-x

Cerebral organoids reveal early cortical maldevelopment in schizophrenia—computational anatomy and genomics, role of FGFR1
Cited by: 123
Author(s): Ewa K. Stachowiak, Courtney A. Benson, Sridhar T. Narla, Alexander Dimitri, L. E. Bayona Chuye, Siddhartha Dhiman, K. Harikrishnan, Seerat Elahi, David A. Freedman, Kristen J. Brennand, Pinaki Sarder, Michal K. Stachowiak
Software Mentions: 3
Published: about 7 years ago

10.1007/s00412-019-00700-0

The molecular basis of monopolin recruitment to the kinetochore
Cited by: 15
Author(s): Rebecca Plowman, Namit Singh, Eelco C. Tromer, Angel Payan, Eris Duro, Christos Spanos, Juri Rappsilber, Berend Snel, Geert J.P.L. Kops, K.D. Corbett, Adèle L. Marston
Software Mentions: 3
Published: over 5 years ago

10.3389/fnins.2021.736313

The Proliferation of Dentate Gyrus Progenitors in the Ferret Hippocampus by Neonatal Exposure to Valproic Acid
Cited by: 5
Author(s): Kazuhiko Sawada, Shiori Kamiya, Ichio Aoki
Software Mentions: 2
Published: about 3 years ago

10.3389/fnmol.2018.00345

S-palmitoylation Is Required for the Control of Growth Cone Morphology of DRG Neurons by CNP-Induced cGMP Signaling
Cited by: 13
Author(s): Alexandre Dumoulin, Alina Dagane, Gunnar Dittmar, Fritz G. Rathjen
Software Mentions: 2
Published: about 6 years ago

10.3389/fncir.2018.00035

Parvalbumin and GABA Microcircuits in the Mouse Superior Colliculus
Cited by: 49
Author(s): Claudio Villalobos, Qiong Wu, Psyche H Lee, Paul J. May, Michele A. Basso
Software Mentions: 2
Published: over 6 years ago

10.3389/fnmol.2018.00119

Mental Illnesses-Associated Fxr1 and Its Negative Regulator Gsk3β Are Modulators of Anxiety and Glutamatergic Neurotransmission
Cited by: 24
Author(s): Jivan Khlghatyan, Alesya Evstratova, Simon Chamberland, Aleksandra Marakhovskaia, Arash Bahremand, Katalin Tóth, Jean‐Martin Beaulieu
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2017.00932

Tumor Necrosis Factor (TNF) Bioactivity at the Site of an Acute Cell-Mediated Immune Response Is Preserved in Rheumatoid Arthritis Patients Responding to Anti-TNF Therapy
Cited by: 12
Author(s): Rachel Byng-Maddick, Chris Turner, Gabriele Pollara, Matthew Ellis, Naomi Guppy, Lucy Bell, Michael R. Ehrenstein, Mahdad Noursadeghi
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2020.01501

Influence of Catecholamines (Epinephrine/Norepinephrine) on Biofilm Formation and Adhesion in Pathogenic and Probiotic Strains of Enterococcus faecalis
Cited by: 26
Author(s): Mélyssa Cambronel, Flore Nilly, Ouiza Mesguida, Amine M. Boukerb, Pierre‐Jean Racine, Olfa Baccouri, Valérie Borrel, J Forga Martel, Florian Fécamp, Rikki Knowlton, Kurt Zimmermann, Eugen Domann, Sophie Rodrigues, Marc Feuilloley, Nathalie Connil
Software Mentions: 2
Published: over 4 years ago

10.3389/fphys.2020.563372

Cadherin-11 Is Required for Neural Crest Specification and Survival
Cited by: 18
Author(s): Subrajaa Manohar, Alberto Camacho‐Magallanes, Camilo V Echeverria, Crystal D. Rogers
Software Mentions: 2
Published: about 4 years ago

10.3389/fimmu.2020.01388

A Novel α/β Hydrolase Domain Protein Derived From Haemonchus contortus Acts at the Parasite-Host Interface
Cited by: 10
Author(s): Mingmin Lu, Xiaowei Tian, Ai-Ling Tian, Charles Li, Yan Ren, Lixin Xu, Xiaoling Song, Xiangrui Li
Software Mentions: 2
Published: over 4 years ago

10.3389/fendo.2017.00253

Culture in Glucose-Depleted Medium Supplemented with Fatty Acid and 3,3′,5-Triiodo-l-Thyronine Facilitates Purification and Maturation of Human Pluripotent Stem Cell-Derived Cardiomyocytes
Cited by: 33
Author(s): Bin Lin, Xianming Lin, Maxine W. Stachel, Elisha Wang, Yan Luo, Joshua M. Lader, Xiaofang Sun, Mario Delmar, Lei Bu
Software Mentions: 2
Published: about 7 years ago

10.3389/fimmu.2019.00542

Discrepancies in the Tumor Microenvironment of Spontaneous and Orthotopic Murine Models of Pancreatic Cancer Uncover a New Immunostimulatory Phenotype for B Cells
Cited by: 56
Author(s): Sarah Spear, Juliana Candido, Jacqueline McDermott, Cristina Ghirelli, Eleni Maniati, Stephen A. Beers, Frances R. Balkwill, Hemant M. Kocher, Melania Capasso
Software Mentions: 2
Published: over 5 years ago

10.3389/fncel.2020.00108

Three-Dimensional Explant Platform for Studies on Choroid Plexus Epithelium
Cited by: 3
Author(s): Natalia Petersen, Lola Torz, Kristian H. R. Jensen, Gertrud Malene Hjortø, Katja Spieß, Mette M. Rosenkilde
Software Mentions: 2
Published: over 4 years ago

10.1186/s40478-020-01011-7

Lipid-specific IgMs induce antiviral responses in the CNS: implications for progressive multifocal leukoencephalopathy in multiple sclerosis
Cited by: 5
Author(s): Lorna Hayden, Tiia Semenoff, Verena Schultz, Simon F. Merz, Katie J. Chapple, Moses Rodriguez, Arthur E. Warrington, Xia Shi, Clive S. McKimmie, Julia M. Edgar, Katja Thümmler, Christopher Linington, Marieke Pingen
Software Mentions: 2
Published: over 4 years ago

10.3389/fcimb.2017.00475

Predictable, Tunable Protein Production in Salmonella for Studying Host-Pathogen Interactions
Cited by: 14
Author(s): Kendal G. Cooper, Audrey Chong, Tregei Starr, Ciaran E. Finn, Olivia Steele‐Mortimer
Software Mentions: 2
Published: about 7 years ago

10.3389/fncel.2018.00020

Developmental Changes in HCN Channel Modulation of Neocortical Layer 1 Interneurons
Cited by: 8
Author(s): A.S. Bohannon, John J. Hablitz
Software Mentions: 2
Published: almost 7 years ago

10.3389/fimmu.2021.723683

Mitofusin 2 Deficiency Causes Pro-Inflammatory Effects in Human Primary Macrophages
Cited by: 6
Author(s): Vera Khodzhaeva, Yannick Schreiber, Gerd Geißlinger, Ralf P. Brandes, Bernhard Brüne, Dmitry Namgaladze
Software Mentions: 2
Published: over 3 years ago

10.3389/fphys.2018.00097

Neurally Released GABA Acts via GABAC Receptors to Modulate Ca2+ Transients Evoked by Trains of Synaptic Inputs, but Not Responses Evoked by Single Stimuli, in Myenteric Neurons of Mouse Ileum
Cited by: 20
Author(s): Katerina Koussoulas, Mathusi Swaminathan, Candice Fung, Joel C. Bornstein, Jaime Pei Pei Foong
Software Mentions: 2
Published: almost 7 years ago

10.3389/fcimb.2018.00145

The Loss of Expression of a Single Type 3 Effector (CT622) Strongly Reduces Chlamydia trachomatis Infectivity and Growth
Cited by: 14
Author(s): Mathilde M. Cossé, Michael L. Barta, Derek J. Fisher, Lena K. Oesterlin, Béatrice Niragire, Stéphanie Perrinet, Gaël A. Millot, P. Scott Hefty, Agathe Subtil
Software Mentions: 2
Published: over 6 years ago

10.3389/fcimb.2019.00180

Bioactivity of Farnesyltransferase Inhibitors Against Entamoeba histolytica and Schistosoma mansoni
Cited by: 9
Author(s): Alexandra Probst, Trong Duc Nguyen, Nelly El-Sakkary, Danielle Skinner, Brian M. Suzuki, Frederick S. Buckner, Michael H. Gelb, Conor R. Caffrey, Anjan Debnath
Software Mentions: 2
Published: over 5 years ago

10.3390/antiox10091413

SVCT2 Overexpression and Ascorbic Acid Uptake Increase Cortical Neuron Differentiation, Which Is Dependent on Vitamin C Recycling between Neurons and Astrocytes
Cited by: 4
Author(s): Katterine Salazar, Francisca Espinoza, Gustavo Cerda-Gallardo, Luciano Ferrada, Rocío Magdalena, Eder Ramírez, Viviana Ulloa, Natalia Saldivia, Ninoschka Troncoso, María José Oviedo, María José Barahona, Fernando Martínez Martínez, Francisco Nualart
Software Mentions: 2
Published: about 3 years ago

10.1186/s12916-019-1478-3

Profiling of the muscle-specific dystroglycan interactome reveals the role of Hippo signaling in muscular dystrophy and age-dependent muscle atrophy
Cited by: 13
Author(s): Andriy S. Yatsenko, Mariya M. Kucherenko, Yuanbin Xie, Dina Aweida, Henning Urlaub, Renate Scheibe, Shenhav Cohen, Halyna R. Shcherbata
Software Mentions: 2
Published: almost 5 years ago

10.1016/j.dib.2019.103858

Palynological and X-ray fluorescence (XRF) data of Carnian (Late Triassic) formations from western Hungary
Cited by: 4
Author(s): Viktória Baranyi, Ágnes Rostási, Béla Raucsik, Wolfram M. Kürschner
Software Mentions: 2
Published: over 5 years ago

10.3389/fimmu.2021.671756

The 5-Phosphatase SHIP2 Promotes Neutrophil Chemotaxis and Recruitment
Cited by: 3
Author(s): Melina Michael, Barrett L. McCormick, Karen E. Anderson, Utsa Karmakar, Matthieu Vermeren, Stéphane Schurmans, Augustin Amour, Sonja Vermeren
Software Mentions: 2
Published: over 3 years ago

10.1016/j.devcel.2019.04.003

Reductional Meiosis I Chromosome Segregation Is Established by Coordination of Key Meiotic Kinases
Cited by: 27
Author(s): Stefan Galander, Rachael Barton, Weronika E. Borek, Christos Spanos, David A. Kelly, Daniel Robertson, Juri Rappsilber, Adèle L. Marston
Software Mentions: 2
Published: over 5 years ago

10.3389/fimmu.2018.02409

Intestinal CD103+CD11b+ cDC2 Conventional Dendritic Cells Are Required for Primary CD4+ T and B Cell Responses to Soluble Flagellin
Cited by: 21
Author(s): Adriana Flores‐Langarica, Charlotte N. Cook, Katarzyna Müller Luda, Emma Persson, Jennifer L. Marshall, Nonantzin Beristain‐Covarrubias, Juan Carlos Yam‐Puc, Madelene W Dahlgren, Jenny Persson, Satoshi Uematsu, Shizuo Akira, Ian R. Henderson, Bengt Johansson Lindbom, William W. Agace, Adam F. Cunningham
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2018.03038

Intracellular pHluorin as Sensor for Easy Assessment of Bacteriocin-Induced Membrane-Damage in Listeria monocytogenes
Cited by: 13
Author(s): Peter Crauwels, Leonie Schäfer, Dominik Weixler, Nadav Bar, Dzung B. Diep, Christian U. Riedel, Gerd M. Seibold
Software Mentions: 2
Published: almost 6 years ago

10.3389/fnmol.2018.00243

Use of Proteomic Imaging Coupled With Transcriptomic Analysis to Identify Biomolecules Responsive to Cochlear Injury
Cited by: 2
Author(s): Kenyaria V. Noble, Michelle L. Reyzer, Jeremy L. Barth, Hayes McDonald, Michael Tuck, Kevin L. Schey, Edward L. Krug, Hainan Lang
Software Mentions: 2
Published: over 6 years ago

10.1038/s42003-021-02404-7

Essential roles of plexin-B3+ oligodendrocyte precursor cells in the pathogenesis of Alzheimer’s disease
Cited by: 5
Author(s): Naomi Nihonmatsu-Kikuchi, Xiu-Jun Yu, Yoshiki Matsuda, Nobuyuki Ozawa, Taeko Ito, Kazuhito Satou, Tadashi Kaname, Yasushi Iwasaki, Akio Akagi, Mari Yoshida, Shuta Toru, Katsuíku Hirokawa, Akihiko Takashima, Masato Hasegawa, Toshiki Uchihara, Yoshitaka Tatebayashi
Software Mentions: 2
Published: over 3 years ago

10.3389/fncir.2017.00009

Mapping and Analysis of the Connectome of Sympathetic Premotor Neurons in the Rostral Ventrolateral Medulla of the Rat Using a Volumetric Brain Atlas
Cited by: 34
Author(s): Bowen Dempsey, Le Shen, Anita J. Turner, Phillip Bokiniec, Radhika Ramadas, Jan G. Bjaalie, Clément Menuet, Rachael L. Neve, Andrew M. Allen, Ann K. Goodchild, Simon McMullan
Software Mentions: 2
Published: over 7 years ago

10.3389/fnins.2019.01033

Enzymatic Digestion of Hyaluronan-Based Brain Extracellular Matrix in vivo Can Induce Seizures in Neonatal Mice
Cited by: 12
Author(s): Alena Balashova, Vladimir Pershin, Olga Zaborskaya, Natalia Tkachenko, Andrey Mironov, Evgenii L. Guryev, Л. К. Курбатов, Murat R. Gainullin, И.В. Мухина
Software Mentions: 2
Published: about 5 years ago

10.3389/fnins.2021.629067

Recent Trends and Perspectives in Cerebral Organoids Imaging and Analysis
Cited by: 11
Author(s): Clara Brémond Martin, Camille Simon Chane, Cédric Clouchoux, Aymeric Histace
Software Mentions: 2
Published: over 3 years ago

10.1038/s42003-021-02279-8

Deletion of the diabetes candidate gene Slc16a13 in mice attenuates diet-induced ectopic lipid accumulation and insulin resistance
Cited by: 6
Author(s): Tina Schumann, Jörg König, Christian von Loeffelholz, Daniel F. Vatner, Rachel J. Perry, Michel Bernier, Jason Chami, Christine Henke, Anica Kurzbach, Nermeen N. El-Agroudy, Diana M. Willmes, Dominik Pesta, Rafael de Cabo, John Sullivan, Eric J. Simon, Gerald I. Shulman, Bradford S. Hamilton, Andreas L. Birkenfeld
Software Mentions: 2
Published: over 3 years ago

10.1007/s00412-018-0671-z

Three-dimensional analysis of nuclear heterochromatin distribution during early development in the rabbit
Cited by: 6
Author(s): Amélie Bonnet-Garnier, Kiên Kiêu, Tiphaine Aguirre-Lavin, Krisztina Tar, Pierre Flores, Zichuan Liu, Nathalie Peynot, Martine Chebrout, András Dinnyés, Véronique Duranthon, Nathalie Beaujean
Software Mentions: 2
Published: over 6 years ago

10.1038/s42003-021-02322-8

Testicular somatic cell-like cells derived from embryonic stem cells induce differentiation of epiblasts into germ cells
Cited by: 6
Author(s): Holly M. Rore, Nicholas Owen, Raúl E. Piña-Aguilar, Kevin Docherty, Ryohei Sekido
Software Mentions: 2
Published: over 3 years ago

10.1016/j.devcel.2017.01.015

Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development
Cited by: 87
Author(s): Vinay Bulusu, Nicole Prior, Marteinn T. Snaebjornsson, Andreas Kuehne, Katharina F. Sonnen, Jana Kress, Frank Stein, Carsten Schultz, Uwe Sauer, Alexander Aulehla
Software Mentions: 2
Published: almost 8 years ago

10.3390/cells10010081

Extracellular DNA Correlates with Intestinal Inflammation in Chemically Induced Colitis in Mice
Cited by: 18
Author(s): Martin Marônek, Barbora Gromová, Róbert Lipták, Barbora Konečná, Michal Pastorek, Barbora Čechová, Mária Haršányová, Jaroslav Budiš, Dávid Smoľak, Ján Radvánszky, Tomáš Szemeš, Jana Harsányiová, Alžbeta Trančiková, Roman Gardlík
Software Mentions: 2
Published: almost 4 years ago

10.3390/cells9020355

Impaired Nuclear Export of the Ribonucleoprotein Complex and Virus-Induced Cytotoxicity Combine to Restrict Propagation of the A/Duck/Malaysia/02/2001 (H9N2) Virus in Human Airway Cells
Cited by: 2
Author(s): Sriram Kumar, David Yeo, Nisha Muralidharan, Soak Kuan Lai, Cathlyn Tong, Boon Huan Tan, Richard J. Sugrue
Software Mentions: 2
Published: almost 5 years ago

10.3390/cells8101146

Tubulin-Dependent Transport of Connexin-36 Potentiates the Size and Strength of Electrical Synapses
Cited by: 12
Author(s): Cherie Alicia Brown, Cristiane del Corsso, Christiane Zoidl, Logan W. Donaldson, David C. Spray, Georg Zoidl
Software Mentions: 2
Published: about 5 years ago

10.3390/cells10061405

Hydroquinone Induces NLRP3-Independent IL-18 Release from ARPE-19 Cells
Cited by: 4
Author(s): Niina Bhattarai, Eveliina Korhonen, Yashavanthi Mysore, Kai Kaarniranta, Anu Kauppinen
Software Mentions: 2
Published: over 3 years ago

10.3390/cells9081858

Tissue-Specific Impact of Autophagy Genes on the Ubiquitin–Proteasome System in C. elegans
Cited by: 6
Author(s): Sweta Jha, Carina I. Holmberg
Software Mentions: 2
Published: over 4 years ago

10.3390/cells10040838

Aquaglyceroporin-3’s Expression and Cellular Localization Is Differentially Modulated by Hypoxia in Prostate Cancer Cell Lines
Cited by: 5
Author(s): Andreia de Almeida, Dimitris Parthimos, Holly Dew, Oliver S. Smart, Marie Wiltshire, Rachel J. Errington
Software Mentions: 2
Published: over 3 years ago

10.1038/s41422-019-0216-x

Sodium oligomannate therapeutically remodels gut microbiota and suppresses gut bacterial amino acids-shaped neuroinflammation to inhibit Alzheimer’s disease progression
Cited by: 628
Author(s): Xinyi Wang, Guangqiang Sun, Teng Feng, Jing Zhang, Xun Huang, Tao Wang, Zuoquan Xie, Xingkun Chu, Jun Yang, Huan Wang, Shuaishuai Chang, Yanxue Gong, Lingfei Ruan, Guanqun Zhang, Siyuan Yan, Li-Li Wen, Chen Du, Da Yang, Qingli Zhang, Feifei Lin, Jia Liu, Haiyan Zhang, Changrong Ge, Shifu Xiao, Jian Ding, Meiyu Geng
Software Mentions: 2
Published: about 5 years ago

10.1038/s41422-018-0080-0

STAT3 associates with vacuolar H+-ATPase and regulates cytosolic and lysosomal pH
Cited by: 74
Author(s): Bin Liu, Johan Palmfeldt, Lin Lin, Alexandria Colaço, Kim Katrine Bjerring Clemmensen, Jinrong Huang, Fengping Xu, Xin Liu, Kenji Maeda, Yonglun Luo, Marja Jäättelä
Software Mentions: 2
Published: over 6 years ago

10.1007/s00018-020-03467-1

The Rab5 activator RME-6 is required for amyloid precursor protein endocytosis depending on the YTSI motif
Cited by: 7
Author(s): Simone Eggert, Tomas Gruebl, Ritu Rajender, Carsten Rupp, Bianca Sander, Amelie Heesch, Marius Zimmermann, Sebastian Hoepfner, Hanswalter Zentgraf, Stefan Kins
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41419-018-0396-1

Epigenetic modifiers promote mitochondrial biogenesis and oxidative metabolism leading to enhanced differentiation of neuroprogenitor cells
Cited by: 25
Author(s): Martine Uittenbogaard, Christine A. Brantner, Anne Chiaramello
Software Mentions: 2
Published: over 6 years ago

10.1038/s41419-020-02911-1

Proteomic analysis links alterations of bioenergetics, mitochondria-ER interactions and proteostasis in hippocampal astrocytes from 3xTg-AD mice
Cited by: 41
Author(s): Giulia Dematteis, Gabrielė Vydmantaitė, Federico Alessandro Ruffinatti, Malak Chahin, Serena Farruggio, Elettra Barberis, Eleonora Ferrari, Emílio Marengo, Carla Distasi, Ramunė Morkūnienė, Armando A. Genazzani, Mariagrazia Grilli, Elena Grossini, Marco Corazzari, Marcello Manfredi, Dmitry Lim, Aistė Jekabsone, Laura Tapella
Software Mentions: 2
Published: over 4 years ago

10.1016/j.celrep.2021.109700

Multiplexed drug-based selection and counterselection genetic manipulations in Drosophila
Cited by: 9
Author(s): Nick Matinyan, Mansi Karkhanis, Yezabel Gonzalez, Antrix Jain, Alexander B. Saltzman, Anna Malovannaya, Alejandro Sarrión-Perdigones, Herman A. Dierick, Koen J. T. Venken
Software Mentions: 2
Published: about 3 years ago

10.1007/s00441-018-2793-2

Expression of trans-membrane serine protease 3 (TMPRSS3) in the human organ of Corti
Cited by: 13
Author(s): Wei Liu, Hubert Löwenheim, Peter A. Santi, Rudolf Glueckert, Anneliese Schrott‐Fischer, Helge Rask‐Andersen
Software Mentions: 2
Published: almost 7 years ago

Projects: pypi: Zen

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