Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Viper
https://packages.ecosyste.ms/registries/pypi.org/packages/Viper
Simple VTK based visualization software
2 versions
Latest release: over 1 year ago
Papers Mentioning Viper 26
10.3389/fimmu.2021.705646
On Deep Landscape Exploration of COVID-19 Patients Cells and Severity MarkersCited by: 9
Author(s): Aarón Vázquez-Jiménez, Ugo Enrique Avila-Ponce De León, Meztli Matadamas-Guzmán, Erick Andrés Muciño-Olmos, Yoscelina Estrella Martínez-López, Thelma Escobedo-Tapia, Osbaldo Reséndis-Antonio
Software Mentions: 6
Published: over 3 years ago
10.1186/1471-2105-9-163
OpenMS – An open-source software framework for mass spectrometryCited by: 565
Author(s): Marc Sturm, Andreas Bertsch, Clemens Gröpl, Andreas Hildebrandt, René Hussong, Eva Lange, Nico Pfeifer, Ole Schulz-Trieglaff, Alexandra Zerck, Knut Reinert, Oliver Kohlbacher
Software Mentions: 4
Published: almost 17 years ago
10.1371/journal.pone.0201264
Effective injury forecasting in soccer with GPS training data and machine learningCited by: 142
Author(s): Alessio Rossi, Luca Pappalardo, Paolo Cintia, F. Marcello Iaia, Javier Fernández, Daniel Medina
Software Mentions: 3
Published: over 6 years ago
10.1186/s12859-021-04321-2
Searchlight: automated bulk RNA-seq exploration and visualisation using dynamically generated R scriptsCited by: 10
Author(s): John Cole, Bekir A. Faydaci, David McGuinness, Robin Shaw, Rose A. Maciewicz, Neil Robertson, Carl S. Goodyear
Software Mentions: 3
Published: over 3 years ago
10.1186/1471-2105-9-446
Envelope: interactive software for modeling and fitting complex isotope distributionsCited by: 10
Author(s): Michael T. Sykes, James R. Williamson
Software Mentions: 3
Published: about 16 years ago
10.3390/ijms21239162
Bringing New Methods to the Seed Proteomics Platform: Challenges and PerspectivesCited by: 18
Author(s): Galina Smolikova, Daria Gorbach, Elena Lukasheva, Gregory Mavropolo-Stolyarenko, Tatiana Bilova, Alena Soboleva, Alexander Tsarev, E. V. Romanovskaya, Е. P. Podolskaya, Vladimir A. Zhukov, И. А. Тихонович, С.С. Медведев, Wolfgang Hoehenwarter, Andrej Frolov
Software Mentions: 3
Published: about 4 years ago
10.1007/978-3-030-53291-8_11
Recursive Data Structures in SPARKCited by: 4
Author(s): Claire Dross, Johannes Kanig
Software Mentions: 2
Published: almost 5 years ago
10.1186/1755-8794-1-41
A high confidence, manually validated human blood plasma protein reference setCited by: 140
Author(s): Susann Schenk, Gary J. Schoenhals, Gustavo Souza, Matthias Mann
Software Mentions: 2
Published: over 16 years ago
10.1371/journal.pone.0236643
Accelerometry as a method for external workload monitoring in invasion team sports. A systematic reviewCited by: 56
Author(s): Carlos D. Gómez-Carmona, Alejandro Bastida-Castillo, Sergio José Ibáñez, José Pino-Ortega
Software Mentions: 2
Published: over 4 years ago
10.3390/cancers12123664
Insights on TAM Formation from a Boolean Model of Macrophage Polarization Based on In Vitro StudiesCited by: 10
Author(s): Malvina Marku, Nina Verstraete, Flavien Raynal, Miguel Madrid-Mencía, Marcin Domagala, Jean‐Jacques Fournié, Loïc Ysebaert, Mary Poupot, Véra Pancaldi
Software Mentions: 2
Published: about 4 years ago
10.3389/fmolb.2020.502573
A Middle-Out Modeling Strategy to Extend a Colon Cancer Logical Model Improves Drug Synergy Predictions in Epithelial-Derived Cancer Cell LinesCited by: 10
Author(s): Eirini Tsirvouli, Vasundra Touré, Barbara Niederdorfer, Miguél Vázquez, Åsmund Flobak, Martin Kuiper
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0206229
Annotation of enhanced radiographs for medical image retrieval with deep convolutional neural networksCited by: 24
Author(s): Obioma Pelka, Felix Nensa, Christoph M. Friedrich
Software Mentions: 1
Published: about 6 years ago
10.1186/1550-2783-8-S1-P28
Effects of pre-exercise ingestion of a carbohydrate-electrolyte gel on cycling performanceCited by: 3
Author(s): Mark E. T. Willems, Chris D. J. Toy, Andrew Cox
Software Mentions: 1
Published: about 13 years ago
10.1186/1748-7188-4-10
Tracking cells in Life Cell Imaging videos using topological alignmentsCited by: 39
Author(s): Axel Mosig, Sebastian Jäger, Chaofeng Wang, Sumit K. Nath, Ilker Ersoy, Kannappan Palaniappan, Su-Shing Chen
Software Mentions: 1
Published: over 15 years ago
10.1007/978-3-030-53288-8_7
The Move ProverCited by: 18
Author(s): Jingyi Emma Zhong, Kevin Cheang, Shaz Qadeer, Wolfgang Grieskamp, Sam Blackshear, Junkil Park, Yoni Zohar, Clark Barrett, David L. Dill
Software Mentions: 1
Published: almost 5 years ago
10.3390/v9120393
Biology of Porcine Parvovirus (Ungulate parvovirus 1)Cited by: 51
Author(s): István Mészáros, Ferenc Olasz, Attila Cságola, Peter Tijssen, Zoltán Zádori
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules25030601
Effect of Transitional Metals (Mn and Ni) Substitution in LiCoPO4 OlivinesCited by: 1
Author(s): O. Palumbo, Jessica Manzi, Daniele Meggiolaro, Francesco Vitucci, F. Trequattrini, Mariangela Curcio, A. Paolone, Sergio Brutti
Software Mentions: 1
Published: almost 5 years ago
10.1128/JCM.00508-16
The BD Onclarity HPV Assay on Samples Collected in SurePath Medium Meets the International Guidelines for Human Papillomavirus Test Requirements for Cervical ScreeningCited by: 29
Author(s): Ditte Møller Ejegod, Fabio Bottari, Helle Pedersen, Maria Teresa Sandri, Jesper Bonde
Software Mentions: 1
Published: over 8 years ago
10.1128/JCM.02048-20
Analytical and Clinical Sample Performance Characteristics of the Onclarity Assay for the Detection of Human PapillomavirusCited by: 4
Author(s): Stephen Young, Laurence M. Vaughan, Karen Yanson, Karen Eckert, Aojun Li, James Michael Harris, Aaron Ermel, James A. Williams, Mohammad Al-Ghoul, Catherine L. Cammarata, Stephanie N. Taylor, Ronald D. Luff, Charles K. Cooper, Barbara Van Der Pol
Software Mentions: 1
Published: about 4 years ago
10.3390/polym11101598
Chemical Solution Deposition of Ordered 2D Arrays of Room-Temperature Ferrimagnetic Cobalt Ferrite NanodotsCited by: 7
Author(s): Jun Xu, Justin Manjaly Varghese, Giuseppe Portale, Alessandro Longo, Jamo Momand, Ali Syari’ati, J. A. Heuver, Petra Rudolf, Bart J. Kooi, Beatriz Noheda, Katja Loos
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-019-46543-8
The burden of 14 hr-HPV genotypes in women attending routine cervical cancer screening in 20 states of Mexico: a cross-sectional studyCited by: 9
Author(s): Abraham Campos‐Romero, Karen S. Anderson, Adhemar Longatto‐Filho, Marco A. Luna-Ruiz Esparza, David J. Morán-Portela, Javier A. Castro-Menéndez, José L Moreno-Camacho, Diana Y. Calva-Espinosa, Manuel A. Acosta-Alfaro, Freddy A. Meynard-Mejía, Marlene Muñoz-Gaitán, Jonathan Alcántar‐Fernández
Software Mentions: 1
Published: over 5 years ago
10.1155/2014/547062
A Comprehensive Review on Adaptability of Network Forensics Frameworks for Mobile Cloud ComputingCited by: 26
Author(s): Suleman Khan, Muhammad Shiraz, Ainuddin Wahid Abdul Wahab, Abdullah Gani, Han Qi, Zulkanain Bin Abdul Rahman
Software Mentions: 1
Published: almost 11 years ago
10.3390/s19091983
Review on Wearable Technology Sensors Used in Consumer Sport ApplicationsCited by: 202
Author(s): Gobinath Aroganam, Nadarajah Manivannan, David Harrison
Software Mentions: 1
Published: over 5 years ago
10.12669/pjms.341.14470
Honest Errors and Self-Retraction should not be Stigmatized or PenalizedCited by: 2
Author(s): Shaukat Ali Jawaid
Software Mentions: 1
Published: almost 7 years ago
10.2196/14216
Tools for the Diagnosis of Herpes Simplex Virus 1/2: Systematic Review of Studies Published Between 2012 and 2018Cited by: 23
Author(s): Zeeshaan Arshad, Abrar Alturkistani, David Brindley, C. S. Lam, Kimberley Foley, Edward Meinert
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0202952
Debonding force and shear bond strength of an array of CAD/CAM-based customized orthodontic brackets, placed by indirect bonding- An In Vitro studyCited by: 15
Author(s): Ha Na Sha, Sung‐Hwan Choi, Hyung Seog Yu, Chung Ju Hwang, Jung Yul, Kwang Mahn Kim
Software Mentions: 1
Published: over 6 years ago