Data

Tools

Indexes

Applications

Experiments

Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: pypi: VCF-kit

https://packages.ecosyste.ms/registries/pypi.org/packages/VCF-kit

Assorted utilities for the variant call format
16 versions
Latest release: over 4 years ago
104 downloads last month

Enhanced Analysis
Educational Contributors: [email protected] [email protected]
Repository Activity:
Repository Owner: Andersen Lab (organization)
Northwestern University Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +40 Educational commit emails
    2 contributors with educational email addresses
  • +20 Academic repository owner
    Repository owned by academic institution
  • +15 Institutional repository owner
    Repository owned by research institution
  • +2 Science terms in README
    1 scientific terms found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning VCF-kit 6

10.1371/journal.pone.0252207
Genomic diversity of 39 samples of Pyropia species grown in Japan
Cited by: 4
Author(s): Yukio Nagano, Kei Kimura, Genta Kobayashi, Yoshio Kawamura
Software Mentions: 6
Published: about 4 years ago
10.7554/eLife.51139
Diversification of the Caenorhabditis heat shock response by Helitron transposable elements
Cited by: 19
Author(s): Jacob M. Garrigues, Brian V Tsu, Matthew D. Daugherty, Amy E. Pasquinelli
Software Mentions: 4
Published: over 5 years ago
10.1038/s41598-021-82625-2
Genomic scans for selective sweeps through haplotype homozygosity and allelic fixation in 14 indigenous sheep breeds from Middle East and South Asia
Cited by: 14
Author(s): Sirous Eydivandi, Mahmoud Amiri Roudbar, Mohammad Osman Karimi, Goutam Sahana
Software Mentions: 3
Published: over 4 years ago
10.3390/ani10010053
Whole-Genome Signatures of Selection in Sport Horses Revealed Selection Footprints Related to Musculoskeletal System Development Processes
Cited by: 13
Author(s): Siavash Salek Ardestani, Mehdi Aminafshar, Mohammad Bagher Zandi Baghche Maryam, Mohammad Hossein Banabazi, Mehdi Sargolzaei, Younes Miar
Software Mentions: 2
Published: over 5 years ago
10.3390/ijms22116063
Mutations in bdcA and valS Correlate with Quinolone Resistance in Wastewater Escherichia coli
Cited by: 2
Author(s): Negin Malekian, Ali Al-Fatlawi, Thomas U. Berendonk, Michael Schroeder
Software Mentions: 2
Published: about 4 years ago
10.3389/fgene.2020.571751
Development and Evaluation of a High-Throughput Single-Nucleotide Polymorphism Array for Large Yellow Croaker (Larimichthys crocea)
Cited by: 9
Author(s): Tao Zhou, Baohua Chen, Qiaozhen Ke, Ji Zhao, Fei Pu, Yidi Wu, Chen Lin, Zhixiong Zhou, Yulin Bai, Ying Pan, Jie Gong, Weiqiang Zheng, Peng Xu
Software Mentions: 1
Published: almost 5 years ago