Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: TransVar

https://packages.ecosyste.ms/registries/pypi.org/packages/TransVar

Transcript-based Variant annotator
37 versions
Latest release: about 3 years ago
202 downloads last month

Papers Mentioning TransVar 7

10.3390/cancers13102366
Sequence Neighborhoods Enable Reliable Prediction of Pathogenic Mutations in Cancer Genomes
Cited by: 6
Author(s): Shayantan Banerjee, Karthik Raman, Balaraman Ravindran
Software Mentions: 4
Published: over 3 years ago
10.15252/msb.20209840
From chemoproteomic‐detected amino acids to genomic coordinates: insights into precise multi‐omic data integration
Cited by: 7
Author(s): Maria Palafox, Heta S Desai, Valerie A. Arboleda, Keriann M. Backus
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0236907
Novel candidates of pathogenic variants of the BRCA1 and BRCA2 genes from a dataset of 3,552 Japanese whole genomes (3.5KJPNv2)
Cited by: 7
Author(s): Hideki Tokunaga, Keita Iida, Atsushi Hozawa, Soichi Ogishima, Yoh Watanabe, Shogo Shigeta, Muneaki Shimada, Yumi Yamaguchi-Kabata, Shu Tadaka, Fumiki Katsuoka, Itó S, Kazuki Kumada, Yohei Hamanaka, Nobuo Fuse, Kengo Kinoshita, Masayuki Yamamoto, Nobuo Yaegashi, Jun Yasuda
Software Mentions: 3
Published: almost 4 years ago
10.1186/s12864-016-2727-x
Hotspot mutations delineating diverse mutational signatures and biological utilities across cancer types
Cited by: 24
Author(s): Tenghui Chen, Zixing Wang, Wanding Zhou, Zechen Chong, Funda Meric‐Bernstam, Gordon B. Mills, Ken Chen
Software Mentions: 2
Published: over 8 years ago
10.1155/2021/3609028
Genetic Mutation Analysis in Small Cell Lung Cancer by a Novel NGS-Based Targeted Resequencing Gene Panel and Relation with Clinical Features
Cited by: 12
Author(s): Jin Wang, Li Zhao, Xu Sun, Fachen Zhou, Yixiang Zhang, Shilei Zhao, Tao Guo, Zhe Sun, Fengzhou Li, Wen-Hui Su, Zhuoshi Li
Software Mentions: 1
Published: over 3 years ago
10.1038/s41431-020-00784-8
Atrial fibrillation—a complex polygenetic disease
Cited by: 18
Author(s): John Rastrup Andersen, Laura Andreasen, Morten Olesen
Software Mentions: 1
Published: about 4 years ago
10.3390/jcm9020372
Loss-of-Function Variants in Cytoskeletal Genes Are Associated with Early-Onset Atrial Fibrillation
Cited by: 13
Author(s): Oliver Bundgaard Vad, Christian Paludan‐Müller, Gustav Ahlberg, Silje Madeleine Kalstø, Jonas Ghouse, Laura Andreasen, Stig Haunsø, Arnljot Tveit, Ahmad Sajadieh, Ingrid E. Christophersen, Jesper Hastrup Svendsen, Morten S. Olesen
Software Mentions: 1
Published: almost 5 years ago