Projects: pypi: TopHat
https://packages.ecosyste.ms/registries/pypi.org/packages/TopHat
TopHat Platform
3 versions
Latest release: almost 14 years ago
9 downloads last month
Science Score: 90/100
Starting Score: 100 points
Bonuses:
Penalties:
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-10
PyPI ecosystem
General-purpose ecosystem
Very Likely Science (90)
Papers Mentioning TopHat 5,017
10.1038/s41598-018-27050-8
Intraflagellar transport 46 (IFT46) is essential for trafficking IFT proteins between cilia and cytoplasm in ParameciumCited by: 10
Author(s): Lei Shi, Xuefei Shi, Yuan Shen
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-27664-y
Integrated microRNA and mRNA expression profiling reveals a complex network regulating pomegranate (Punica granatum L.) seed hardnessCited by: 19
Author(s): Xiang Luo, Da Cao, Jianfeng Zhang, Li Chen, Xiaocong Xia, Haoxian Li, Dan Zhao, Fuhong Zhang, Hui Xue, Lina Chen, Yongzhou Li, Shangyin Cao
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-27826-y
Exon Junction Complexes can have distinct functional flavours to regulate specific splicing eventsCited by: 26
Author(s): Zhen Wang, Lionel Ballut, Isabelle Barbosa, Hervé Le Hir
Software Mentions: 1
Published: over 8 years ago
10.3390/ijms22041559
Identifying Wild Versus Cultivated Gene-Alleles Conferring Seed Coat Color and Days to Flowering in SoybeanCited by: 5
Author(s): Cheng Liu, Xianlian Chen, Wubin Wang, Xinyang Hu, Han Wang, Qingyuan He, Huanming Yang, Shihua Xiang, Junyi Gai
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-018-28371-4
Eosinophils support adipocyte maturation and promote glucose tolerance in obesityCited by: 54
Author(s): Eun Hui Lee, Michal Itan, Jae‐Dong Jang, Hyeon-Jung Gu, Perri Rozenberg, Melissa K. Mingler, Ting Wen, Ji-Young Yoon, Shi-Young Park, Joo Young Roh, Cheol Soo Choi, Woo‐Jae Park, Ariel Munitz, YunJae Jung
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-28509-4
Gene expression profile in peripheral blood mononuclear cells of postpartum depression patientsCited by: 17
Author(s): Danqing Pan, Yang Xu, Lei Zhang, Su Qizhu, Manman Chen, Bing Li, Qian Xiao, Qi Gao, Xinjun Peng, Binfei Jiang, Yuqing Gu, Ying Du, Pengfei Gao
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-27820-4
Transcriptional profiling and genes involved in acquired thermotolerance in Banana: a non-model cropCited by: 14
Author(s): S. M. Vidya, Himansu Kumar, R. M. Bhatt, R. H. Laxman, K. V. Ravishankar
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-018-27643-3
The lincRNA MIRAT binds to IQGAP1 and modulates the MAPK pathway in NRAS mutant melanomaCited by: 18
Author(s): Martina Sanlorenzo, Igor Vujic, Rosaura Esteve-Puig, Kevin Lai, Marin Vujic, Kevin Lin, Christian Posch, Michelle Dimon, Adrian Moy, Mitchell Zekhtser, Katia Johnston, Deborah Gho, Won‐Kyung Ho, Abhinay Gajjala, Juan Oses Prieto, Alma L. Burlingame, Adil Daud, Klemens Rappersberger, Susana Ortiz‐Urda
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-018-29278-w
Temporal analysis of Arabidopsis genes activated by Eucalyptus grandis NAC transcription factors associated with xylem fibre and vessel developmentCited by: 14
Author(s): Maritz Laubscher, Katrien Brown, Libert Brice Tonfack, Alexander Andrew Myburg, Eshchar Mizrachi, Steven G. Hussey
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-018-29365-y
Integrated mRNA, sRNA, and degradome sequencing reveal oilseed rape complex responses to Sclerotinia sclerotiorum (Lib.) infectionCited by: 15
Author(s): Hongju Jian, Jinqi Ma, Lijuan Wei, Aoxiang Zhang, Bo Yang, Jiana Li, Xinhua Xu, Liezhao Liu
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms22041698
Particle Size and Biological Fate of ZnO Do Not Cause Acute Toxicity, but Affect Toxicokinetics and Gene Expression Profiles in the Rat Livers after Oral AdministrationCited by: 18
Author(s): Yu Jin, Soo‐Jin Choi
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-018-30451-4
Mechanisms of wheat (Triticum aestivum) grain storage proteins in response to nitrogen application and its impacts on processing qualityCited by: 31
Author(s): Ting Zheng, Pengfei Qi, Yong-Li Cao, Yanan Han, Hongling Ma, Zhen-Ru Guo, Yan Wang, Yu Qiao, Shi-Yu Hua, Haiyue Yu, Wang Jiang-ping, Jing Zhu, Cai-Yi Zhou, Yazhou Zhang, Qing Chen, Li Kong, Jirui Wang, Qiantao Jiang, Zehong Yan, Xiujin Lan, Guoquan Fan, Yuming Wei, Youliang Zheng
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-018-29812-w
Resistance to retinopathy development in obese, diabetic and hypertensive ZSF1 rats: an exciting model to identify protective genesCited by: 3
Author(s): Vincenza Caolo, Quentin Roblain, J Lecomte, Paolo Carai, Linsey J. F. Peters, Ilona Cuijpers, Emma Robinson, Kasper Derks, Jurgen Sergeys, Agnès Noël, Elizabeth A. V. Jones, Lieve Moons, Stéphane Heymans
Software Mentions: 1
Published: about 8 years ago
10.3390/biom9120753
Genomic, Transcriptomic and Enzymatic Insight into Lignocellulolytic System of a Plant Pathogen Dickeya sp. WS52 to Digest Sweet Pepper and Tomato StalkCited by: 14
Author(s): Yingjie Yang, Wei Lin, Raghvendra Pratap Singh, Qian Xu, Chen Zhihou, Yuan Yuan, Ping Zou, Yiqiang Li, Chengsheng Zhang
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-018-31594-0
Safety and Optimization of Metabolic Labeling of Endothelial Progenitor Cells for TrackingCited by: 19
Author(s): Sangsoo Han, Hye-Eun Shim, Soon‐Jung Park, Byoung-Chul Kim, Dong‐Eun Lee, Hyung-Min Chung, Sung-Hwan Moon, Sun-Woong Kang
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-018-31301-z
Transcriptome sequencing reveals key potential long non-coding RNAs related to duration of fertility trait in the uterovaginal junction of egg-laying hensCited by: 13
Author(s): Adeyinka Abiola Adetula, Lantao Gu, Chinedu Charles Nwafor, Xiaoyong Du, Shuhong Zhao, Shijun Li
Software Mentions: 1
Published: about 8 years ago