Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: SloppyCell

https://packages.ecosyste.ms/registries/pypi.org/packages/SloppyCell

2 versions
Latest release: about 1 year ago
7 downloads last month

Papers Mentioning SloppyCell 15

10.1371/journal.pcbi.1005351

ASPASIA: A toolkit for evaluating the effects of biological interventions on SBML model behaviour
Cited by: 3
Author(s): Stephanie Evans, Kieran Alden, Lourdes Cucurull‐Sanchez, Christopher Larminie, Mark Coles, Marika C. Kullberg, Jon Timmis
Software Mentions: 6
Published: almost 8 years ago

10.1371/journal.pcbi.1002628

Hybrid Models and Biological Model Reduction with PyDSTool
Cited by: 71
Author(s): Robert Clewley
Software Mentions: 5
Published: over 12 years ago

10.1098/rsta.2011.0166

Simulating the physiology of athletes during endurance sports events: modelling human energy conversion and metabolism
Cited by: 14
Author(s): Hans van Beek, Farahaniza Supandi, Anand Gavai, Albert A. de Graaf, Thomas W. Binsl, Hannes Hettling
Software Mentions: 2
Published: about 13 years ago

10.1016/j.celrep.2019.07.067

PP1 and PP2A Use Opposite Phospho-dependencies to Control Distinct Processes at the Kinetochore
Cited by: 36
Author(s): Richard J Smith, Marília H. Cordeiro, Norman E. Davey, Giulia Vallardi, Andrea Ciliberto, Fridolin Groß, Adrian T. Saurin
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1006449

Implications of alternative routes to APC/C inhibition by the mitotic checkpoint complex
Cited by: 5
Author(s): Fridolin Groß, Paolo Bonaiuti, Silke Hauf, Andrea Ciliberto
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1004562

A Kinetic Platform to Determine the Fate of Hydrogen Peroxide in Escherichia coli
Cited by: 22
Author(s): Kristin J. Adolfsen, Mark P. Brynildsen
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pcbi.0030189

Universally Sloppy Parameter Sensitivities in Systems Biology Models
Cited by: 1,054
Author(s): Ryan N. Gutenkunst, Joshua J. Waterfall, Fergal Casey, Kevin Brown, Christopher R. Myers, James P. Sethna
Software Mentions: 1
Published: about 17 years ago

10.1371/journal.pgen.1006132

Selection on Network Dynamics Drives Differential Rates of Protein Domain Evolution
Cited by: 3
Author(s): Brian K. Mannakee, Ryan N. Gutenkunst
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0152316

A Computational Model of Inhibition of HIV-1 by Interferon-Alpha
Cited by: 9
Author(s): Edward P. Browne, Benjamin Letham, Cynthia Rudin
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0151722

Multiscale Metabolic Modeling of C4 Plants: Connecting Nonlinear Genome-Scale Models to Leaf-Scale Metabolism in Developing Maize Leaves
Cited by: 32
Author(s): Eli Bogart, Christopher R. Myers
Software Mentions: 1
Published: over 8 years ago

10.1186/s12862-015-0515-x

Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast
Cited by: 13
Author(s): Russell A. Hermansen, Brian K. Mannakee, Wolfgang Knecht, David A. Liberles, Ryan N. Gutenkunst
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.ppat.1003238

Kinetics of Coinfection with Influenza A Virus and Streptococcus pneumoniae
Cited by: 169
Author(s): Amber M. Smith, Frederick R. Adler, Ruy M. Ribeiro, Ryan N. Gutenkunst, Julie McAuley, Jonathan A. McCullers, Alan S. Perelson
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pcbi.1003958

Estimating Relative Changes of Metabolic Fluxes
Cited by: 13
Author(s): Lei Huang, Dongsung Kim, Xiaojing Liu, Christopher R. Myers, Jason W. Locasale
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pcbi.1002130

Analyzing the Functional Properties of the Creatine Kinase System with Multiscale ‘Sloppy’ Modeling
Cited by: 37
Author(s): Hannes Hettling, Hans van Beek
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pcbi.1001081

Effect of 1918 PB1-F2 Expression on Influenza A Virus Infection Kinetics
Cited by: 65
Author(s): Amber M. Smith, Frederick R. Adler, Julie McAuley, Ryan N. Gutenkunst, Ruy M. Ribeiro, Jonathan A. McCullers, Alan S. Perelson
Software Mentions: 1
Published: over 13 years ago