Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: SigProfilerExtractor

https://packages.ecosyste.ms/registries/pypi.org/packages/SigProfilerExtractor

Extracts mutational signatures from mutational catalogues
49 versions
Latest release: about 1 year ago
1 dependent package
764 downloads last month

Papers Mentioning SigProfilerExtractor 7

10.1371/journal.pgen.1009302

UV-exposure, endogenous DNA damage, and DNA replication errors shape the spectra of genome changes in human skin
Cited by: 24
Author(s): Natalie Saini, Camille K. Giacobone, Leszek J. Klimczak, Brian N. Papas, Adam Burkholder, Jianliang Li, David C. Fargo, Re Bai, Kevin Gerrish, Cynthia L. Innes, Shepherd H. Schurman, Dmitry A. Gordenin
Software Mentions: 4
Published: over 3 years ago

10.1038/s42003-021-01973-x

Genomic landscape of extraordinary responses in metastatic breast cancer
Cited by: 2
Author(s): Sun Min Lim, Eun Young Kim, Kyung Hae Jung, Sora Kim, Ja Seung Koo, Kyung Sik Kim, Seho Park, Hyung Seok Park, Byoung Woo Park, Young Up Cho, Jee Ye Kim, Soonmyung Paik, Nak‐Jung Kwon, Gun Min Kim, Ji Hyoung Kim, Min Hwan Kim, Min Hyok Jeon, Sang Woo Kim, Joohyuk Sohn
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-021-98084-8

Paired comparisons of mutational profiles before and after brachytherapy in asian uveal melanoma patients
Cited by: 1
Author(s): Woo Seung Lee, Junwon Lee, Jun‐Chul Choi, Hyun Goo Kang, Sung Chul Lee, Ju Han Kim
Software Mentions: 3
Published: almost 3 years ago

10.3390/cancers13040929

Germline and Somatic Whole-Exome Sequencing Identifies New Candidate Genes Involved in Familial Predisposition to Serrated Polyposis Syndrome
Cited by: 12
Author(s): Yasmin Soares de Lima, Coral Arnau‐Collell, Marcos Díaz‐Gay, Laia Bonjoch, Sebastià Franch‐Expósito, Jenifer Muñoz, Leticia Moreira, Teresa Ocaña, Míriam Cuatrecasas, Cristina Herrera‐Pariente, Sabela Carballal, Lorena Moreno, Aránzazu Díaz de Bustamante, Antoni Castells, Luís Bujanda, Joaquín Cubiella, Daniel Rodríguez‐Alcalde, Francesc Balaguer, Sergi Castellví–Bel
Software Mentions: 2
Published: over 3 years ago

10.3390/cancers13061259

Comprehensive Genomic Characterization of Fifteen Early-Onset Lynch-Like Syndrome Colorectal Cancers
Cited by: 3
Author(s): Mariano Golubicki, Marcos Díaz‐Gay, Laia Bonjoch, Sebastià Franch‐Expósito, Jenifer Muñoz, Míriam Cuatrecasas, Teresa Ocaña, Soledad Iseas, Guillermo Méndez, Marcela Carballido, Juan Robbio, Daniel Cisterna, Enrique Roca, Antoni Castells, Francesc Balaguer, Sergi Castellví‐Bel, Marina Antelo
Software Mentions: 1
Published: over 3 years ago

10.1007/s00204-020-02878-0

Mutagenicity of acrylamide and glycidamide in human TP53 knock-in (Hupki) mouse embryo fibroblasts
Cited by: 20
Author(s): Lisa Hölzl-Armstrong, Jill E. Kucab, Sarah Moody, Edwin Zwart, Lucie Loutkotová, Veronica Duffy, Mirjam Luijten, Gonçalo Gamboa da Costa, Michael R. Stratton, David H. Phillips, Volker M. Arlt
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms22031310

Identification of New Genes Involved in Germline Predisposition to Early-Onset Gastric Cancer
Cited by: 6
Author(s): Cristina Herrera‐Pariente, Roser Capó-García, Marcos Díaz‐Gay, Sabela Carballal, Jenifer Muñoz, Joan Llach, Ariadna Sánchez, Laia Bonjoch, Coral Arnau‐Collell, Yasmin Soares de Lima, Mariano Golubicki, Gerhard Jung, Juan José Lozano, Antoni Castells, Francesc Balaguer, Luís Bujanda, Sergi Castellví‐Bel, Leticia Moreira
Software Mentions: 1
Published: over 3 years ago