Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Shotgun
https://packages.ecosyste.ms/registries/pypi.org/packages/Shotgun
Shotgun package
1 version
Latest release: over 10 years ago
19 downloads last month
Papers Mentioning Shotgun 16
10.1002/ece3.6941
A priori estimation of sequencing effort in complex microbial metatranscriptomesCited by: 2
Author(s): Toni Monleón-Getino, Jorge Frias-Lopez
Software Mentions: 8
Published: about 4 years ago
10.1371/journal.pbio.1002210
The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogasterCited by: 258
Author(s): Claire L. Webster, Fergal M Waldron, Shaun Robertson, Daisy Crowson, Giada Ferrari, Juan F. Quintana, Jean-Michel Brouqui, Elizabeth H. Bayne, Ben Longdon, Amy H. Buck, Brian P. Lazzaro, Jewelna Akorli, Penelope R. Haddrill, Darren J. Obbard
Software Mentions: 6
Published: over 9 years ago
10.1002/mds.28197
The Parkinson's Disease <scp>Genome‐Wide</scp> Association Study Locus BrowserCited by: 61
Author(s): Francis P. Grenn, Jonggeol J. Kim, Mary B. Makarious, Hirotaka Iwaki, Anastasia Illarionova, Kajsa Brolin, Jillian H. Kluss, Artur Schumacher-Schuh, Hampton Leonard, Faraz Faghri, Kimberley Billingsley, Lynne Krohn, Ashley Hall, Mónica Díez-Fairén, María Teresa Periñán, Jia Nee Foo, Cynthia Sandor, Caleb Webber, Brian Fiske, J. Raphael Gibbs, Mike A. Nalls, Andrew B. Singleton, Sara Bandrés‐Ciga, Xylena Reed, Cornelis Blauwendraat
Software Mentions: 5
Published: about 4 years ago
10.1186/s12862-016-0700-6
Surprisingly rich repertoire of Wnt genes in the demosponge Halisarca dujardiniCited by: 40
Author(s): Ilya Borisenko, Marcin Adamski, Alexander Ereskovsky, Maja Adamska
Software Mentions: 4
Published: over 8 years ago
10.3390/microorganisms9030584
Implications of Tributyrin on Gut Microbiota Shifts Related to Performances of Weaning PigletsCited by: 15
Author(s): Francesco Miragoli, Vania Patrone, Aldo Prandini, Samantha Sigolo, Matteo Dell’Anno, Luciana Rossi, Alice Senizza, L. Morelli, Maria Luisa Callegari
Software Mentions: 3
Published: over 3 years ago
10.1186/1471-2407-11-368
Purine Nucleoside Phosphorylase mediated molecular chemotherapy and conventional chemotherapy: A tangible union against chemoresistant cancerCited by: 11
Author(s): Preetinder Singh, Swapna Joshi, Pamela J. Russell, Sham V. Nair, Aparajita Khatri
Software Mentions: 2
Published: over 13 years ago
10.1186/1471-2229-11-65
High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across speciesCited by: 79
Author(s): Dário Grattapaglia, Orzenil B. Silva‐Junior, Matias Kirst, Bruno Marco de Lima, Danielle Assis de Faria, George J. Pappas
Software Mentions: 2
Published: over 13 years ago
10.1371/journal.pone.0072096
Replica Exchange Improves Sampling in Low-Resolution Docking Stage of RosettaDockCited by: 22
Author(s): Zhe Zhang, Oliver Lange
Software Mentions: 2
Published: about 11 years ago
10.3389/fimmu.2021.724662
Activated γδ T Cells With Higher CD107a Expression and Inflammatory Potential During Early Pregnancy in Patients With Recurrent Spontaneous AbortionCited by: 10
Author(s): Yu Liu, Yang Zhang, Jun Xiong, Jianjun Li, Ying Zhang, Qi Kang, Pan Zhi, Qiang Wang, Hui Wang, Wanjiang Zeng, Yafei Huang
Software Mentions: 2
Published: over 3 years ago
10.1111/ics.12594
Revealing the secret life of skin ‐ with the microbiome you never walk aloneCited by: 42
Author(s): Riccardo Sfriso, Markus Egert, Mathias Gempeler, R. Voegeli, Remo Campiche
Software Mentions: 1
Published: almost 5 years ago
10.1186/1471-2164-14-7
Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomesCited by: 10
Author(s): Fabio Gori, Susannah G. Tringe, Gianluigi Folino, Sacha A. F. T. van Hijum, Huub J. M. Op den Camp, Mike S. M. Jetten, Elena Marchiori
Software Mentions: 1
Published: almost 12 years ago
10.3389/fncel.2015.00325
Lipidome of midbody released from neural stem and progenitor cells during mammalian cortical neurogenesisCited by: 24
Author(s): Yoko Arai, Júlio L. Sampaio, Michaela Wilsch‐Bräuninger, Andreas Ettinger, Christiane Haffner, Wieland B. Huttner
Software Mentions: 1
Published: about 9 years ago
10.1590/1678-9199-JVATITD-2019-0101
Chronic venous ulcers: a review on treatment with fibrin sealant and prognostic advances using proteomic strategiesCited by: 17
Author(s): Luciana Patrícia Fernandes Abbade, Rui Seabra Ferreira Júnior, Lucilene Delazari dos Santos, Benedito Barraviera
Software Mentions: 1
Published: almost 5 years ago
10.3390/vetsci8070138
Accessing Dietary Effects on the Rumen Microbiome: Different Sequencing Methods Tell Different StoriesCited by: 2
Author(s): Mi Zhou, Eóin O’Hara, Shaoxun Tang, Yanhong Chen, M. E. Walpole, P. Górka, G. B. Penner, Le Luo Guan
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0193561
In silico prediction of neuropeptides in Hymenoptera parasitoid waspsCited by: 11
Author(s): J. Chang, Jinyan Zhao, Tian Xiaoli
Software Mentions: 1
Published: over 6 years ago