Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: SeqTools

https://packages.ecosyste.ms/registries/pypi.org/packages/SeqTools

A library for transparent transformation of indexable containers (lists, etc.)
11 versions
Latest release: about 1 year ago
175 downloads last month

Papers Mentioning SeqTools 9

Genomic and transcriptomic insights into the ecology and metabolism of benthic archaeal cosmopolitan, Thermoprofundales (MBG-D archaea)
Cited by: 80
Author(s): Zhichao Zhou, Yang Liu, Karen G. Lloyd, Jie Pan, Yuchun Yang, Ji‐Dong Gu, Meng Li
Software Mentions: 5
Published: almost 6 years ago

10.3390/pathogens10020242

An Integrated Sequencing Approach for Updating the Pseudorabies Virus Transcriptome
Cited by: 8
Author(s): Gábor Torma, Dóra Tombácz, Zsolt Csabai, Dániel Göbhardter, Zoltán Deim, M Snyder, Zsolt Boldogkői
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13104-016-1847-3

SeqTools: visual tools for manual analysis of sequence alignments
Cited by: 22
Author(s): Gemma Barson, Ed Griffiths
Software Mentions: 2
Published: almost 9 years ago

10.1186/s13100-015-0054-4

The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants
Cited by: 3
Author(s): Stefan Roffler, Fabrizio Menardo, Thomas Wicker
Software Mentions: 2
Published: almost 9 years ago

10.1186/1471-2164-9-634

Biomphalaria glabrata transcriptome: cDNA microarray profiling identifies resistant- and susceptible-specific gene expression in haemocytes from snail strains exposed to Schistosoma mansoni
Cited by: 65
Author(s): Anne E. Lockyer, Jenny Spinks, Richard A. Kane, Karl F. Hoffmann, Jennifer M. Fitzpatrick, David Rollinson, Leslie R. Noble, Catherine S. Jones
Software Mentions: 2
Published: almost 16 years ago

10.1371/journal.pntd.0007353

Refining wet lab experiments with in silico searches: A rational quest for diagnostic peptides in visceral leishmaniasis
Cited by: 4
Author(s): Bruno Hinckel, Tegwen Marlais, Stephanie Airs, Tapan Bhattacharyya, Hideo Imamura, Jean‐Claude Dujardin, Sayda El-Safi, Om Prakash Singh, Andrew K. Falconar, Björn Andersson, Sergey V. Litvinov, Michael A. Miles, Pascal Mertens
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0067741

Flavobacterium plurextorum sp. nov. Isolated from Farmed Rainbow Trout (Oncorhynchus mykiss)
Cited by: 24
Author(s): Leydis Zamora, J. F. Fernández‐Garayzábal, Cristina Sánchez‐Porro, Mari Angel Palacios, Edward R. B. Moore, Lucas Domı́nguez, António Ventosa, A. I. Vela
Software Mentions: 1
Published: over 11 years ago

10.3389/fgene.2020.00758

Short and Long-Read Sequencing Survey of the Dynamic Transcriptomes of African Swine Fever Virus and the Host Cells
Cited by: 14
Author(s): Ferenc Olasz, Dóra Tombácz, Gábor Torma, Zsolt Csabai, Norbert Moldován, Ákos Dörmő, István Prazsák, István Mészáros, Tibor Magyar, Vivien Tamás, Zoltán Zádori, Zsolt Boldogkői
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2229-14-65

Large-scale microsatellite development in grasspea (Lathyrus sativus L.), an orphan legume of the arid areas
Cited by: 41
Author(s): Tao Yang, Junye Jiang, М. О. Burlyaeva, Jinguo Hu, Clarice J. Coyne, Shiv Kumar, R. Redden, Xuelian Sun, Fang Wang, Jianwu Chang, Xiaopeng Hao, Jianping Guan, Xuxiao Zong
Software Mentions: 1
Published: over 10 years ago