pypi: Scaffold | Projects | Ecosyste.ms: Papers

10.1038/s12276-019-0317-0

ERK-dependent phosphorylation of the linker and substrate-binding domain of HSP70 increases folding activity and cell proliferation
Cited by: 20
Author(s): Semi Lim, Dae Gyu Kim, Sung Hoon Kim
Software Mentions: 1
Published: over 6 years ago

10.1007/s00792-013-0574-0

Experimental and computational analysis of the secretome of the hyperthermophilic archaeon Pyrococcus furiosus
Cited by: 7
Author(s): Georg Schmid, Geir Mathiesen, Magnus Ø. Arntzen, Vincentius Gerardus Henricus Eijsink, Michael Thomm
Software Mentions: 1
Published: over 12 years ago

10.12688/f1000research.2-27.v1

Proteins and lipids of glycosomal membranes from Leishmania tarentolae and Trypanosoma brucei
Cited by: 36
Author(s): Claudia Colasante, Frank Voncken, Theresa Manful, Thomas Ruppert, Aloysius G. M. Tielens, Jaap J. van Hellemond, Christine Clayton
Software Mentions: 1
Published: almost 13 years ago

10.1096/fba.2019-00081

Lung cancer cells survive epidermal growth factor receptor tyrosine kinase inhibitor exposure through upregulation of cholesterol synthesis
Cited by: 16
Author(s): Mark Howell, Ryan Green, Roukiah Khalil, Elspeth Foran, Waise Quarni, R. Nair, Stanley M. Stevens, Aleksandr Grinchuk, Andrew Hanna, Shyam S. Mohapatra, Subhra Mohapatra
Software Mentions: 1
Published: almost 6 years ago

10.1002/2211-5463.12454

Suppressor of <scp>IKK</scp> epsilon forms direct interactions with cytoskeletal proteins, tubulin and α‐actinin, linking innate immunity to the cytoskeleton
Cited by: 6
Author(s): Halie A. Sonnenschein, Kenneth F Lawrence, Karli A. Wittenberg, Frank A. Slykas, Emerald L. Dohleman, Jilan B. Knoublauch, Sean M. Fahey, Timothy M. Marshall, James Marion, Jessica K. Bell
Software Mentions: 1
Published: over 7 years ago

10.1186/2045-8118-8-19

Protein profiling reveals inter-individual protein homogeneity of arachnoid cyst fluid and high qualitative similarity to cerebrospinal fluid
Cited by: 12
Author(s): Magnus Berle, Ann Cathrine Kroksveen, Øystein Ariansen Haaland, Tin Tin Aye, Jill A. Opsahl, Eystein Oveland, Knut Wester, Rune J. Ulvik, Christian A. Helland, Frode S. Berven
Software Mentions: 1
Published: over 14 years ago

10.1186/2045-8118-11-14

Removal of albumin and immunoglobulins from canine cerebrospinal fluid using depletion kits: a feasibility study
Cited by: 7
Author(s): Ramona Günther, Eberhard Krause, Michael Schümann, Jérôme Ausseil, Jean‐Michel Heard, Ingolf E. Blasig, Reiner F. Haseloff
Software Mentions: 1
Published: over 11 years ago

10.3390/foods9070932

Health Promoting Bioactive Properties of Novel Hairless Canary Seed Flour after In Vitro Gastrointestinal Digestion
Cited by: 9
Author(s): Emily Mason, Lamia L’Hocine, Allaoua Achouri, Mélanie Pitre, Salwa Karboune
Software Mentions: 1
Published: over 5 years ago

10.3390/foods10010104

Upstream Regulator Analysis of Wooden Breast Myopathy Proteomics in Commercial Broilers and Comparison to Feed Efficiency Proteomics in Pedigree Male Broilers
Cited by: 7
Author(s): Walter Bottje, Kentu Lassiter, V. A. Kuttappan, Nicholas J. Hudson, Casey M. Owens, Behnam Abasht, Sami Dridi, Byung-Whi Kong
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.freeradbiomed.2018.11.022

The human allicin-proteome: S-thioallylation of proteins by the garlic defence substance allicin and its biological effects
Cited by: 50
Author(s): Martin C. H. Gruhlke, Haike Antelmann, Jörg Bernhardt, Veronika Kloubert, Lothar Rink, Alan Slusarenko
Software Mentions: 1
Published: almost 7 years ago

10.3389/fbioe.2016.00100

The Chlorella vulgaris S-Nitrosoproteome under Nitrogen-Replete and -Deplete Conditions
Cited by: 9
Author(s): Calvin A. Henard, Michael T. Guarnieri, Eric P. Knoshaug
Software Mentions: 1
Published: almost 9 years ago

10.3389/fbioe.2020.00491

Personalized Graphene Oxide-Protein Corona in the Human Plasma of Pancreatic Cancer Patients
Cited by: 42
Author(s): Riccardo Di Santo, Luca Digiacomo, Erica Quagliarini, Anna Laura Capriotti, Aldo Laganá, Riccardo Zenezini Chiozzi, Damiano Caputo, Chiara Cascone, Roberto Coppola, Daniela Pozzi, Giulio Caracciolo
Software Mentions: 1
Published: over 5 years ago

10.3389/fbioe.2015.00044

Standard Flow Liquid Chromatography for Shotgun Proteomics in Bioenergy Research
Cited by: 40
Author(s): Susana M. González Fernández-Niño, Andreia M. Smith-Moritz, Leanne Jade G. Chan, Paul D. Adams, Joshua L. Heazlewood, Young-Mo Kim
Software Mentions: 1
Published: over 10 years ago

10.3389/fcvm.2020.00093

Extracellular Matrix Disparities in an Nkx2-5 Mutant Mouse Model of Congenital Heart Disease
Cited by: 4
Author(s): Deanna Bousalis, Christopher S. Lacko, Nora Hlavac, Fariz F. Alkassis, Rebecca A. Wachs, Sahba Mobini, Christine E. Schmidt, Hideko Kasahara
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.741662

Interactions and Cytotoxicity of Human Neurodegeneration- Associated Proteins Tau and α-Synuclein in the Simple Model Dictyostelium discoideum
Cited by: 3
Author(s): Katelyn Mroczek, Sanjanie Fernando, Paul R. Fisher, Sarah J. Annesley
Software Mentions: 1
Published: about 4 years ago

10.3389/fcell.2020.00125

KANK2 Links αVβ5 Focal Adhesions to Microtubules and Regulates Sensitivity to Microtubule Poisons and Cell Migration
Cited by: 19
Author(s): Mladen Paradžik, Jonathan D. Humphries, Nikolina Stojanović, Davor Nestić, Dragomira Majhen, Ana Dekanić, Ivana Samaržija, Delphine Sedda, Igor Weber, Andreja Ambriović-Ristov
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcell.2021.682476

Deciphering the in vivo Dynamic Proteomics of Mesenchymal Stem Cells in Critical Limb Ischemia
Cited by: 4
Author(s): Yipeng Du, Xiaoting Li, Wenying Yan, Zicheng Zeng, Dunzheng Han, Hong Ouyang, Xiu-Di Pan, Biao Luo, Bohua Zhou, Qiang Fu, Dagang Lü, Zheng Huang, Zhiliang Li
Software Mentions: 1
Published: over 4 years ago

10.3389/fcell.2020.00716

BAG5 Promotes Alpha-Synuclein Oligomer Formation and Functionally Interacts With the Autophagy Adaptor Protein p62
Cited by: 4
Author(s): Erik Loewen Friesen, Yu Tong Zhang, Rebecca Earnshaw, Mitchell L. de Snoo, Darren M O'Hara, Victoria Agapova, Hien Chau, Sophie G. Ngana, Kevin S. Chen, Lorraine V. Kalia, Suneil K. Kalia
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.657456

Visualization and Identification of Bioorthogonally Labeled Exosome Proteins Following Systemic Administration in Mice
Cited by: 7
Author(s): Eric Zhang, Yanwen Liu, Chaoshan Han, Chengming Fan, Lu Wang, Wang‐Ping Chen, Yipeng Du, Dunzheng Han, Baron Arnone, Shuyuan Xu, Yuhua Wei, James A. Mobley, Gangjian Qin
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2021.675507

Transition From Proto-Kranz-Type Photosynthesis to HCO3– Use Photosynthesis in the Amphibious Plant Hygrophila polysperma
Cited by: 6
Author(s): Genki Horiguchi, Kaori Matsumoto, Kyosuke Nemoto, Mayu Inokuchi, Naoki Hirotsu
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2019.00580

Elimination of Omega-1,2 Gliadins From Bread Wheat (Triticum aestivum) Flour: Effects on Immunogenic Potential and End-Use Quality
Cited by: 34
Author(s): Susan B. Altenbach, Han-Chang Chang, Xuechen Yu, Bradford W. Seabourn, Peter H.R. Green, Armin Alaedini
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2013.00065

Comparative Proteomics of Chloroplasts Envelopes from Bundle Sheath and Mesophyll Chloroplasts Reveals Novel Membrane Proteins with a Possible Role in C4-Related Metabolite Fluxes and Development
Cited by: 12
Author(s): Kalpana Manandhar-Shrestha, Banita Tamot, Evan P.S. Pratt, S. Saitie, Andrea Bräutigam, Andreas P.M. Weber, Susanne Hoffmann-Benning
Software Mentions: 1
Published: almost 13 years ago

10.3389/fpls.2014.00661

Plant natriuretic peptides induce proteins diagnostic for an adaptive response to stress
Cited by: 21
Author(s): Ilona Turek, Claudius Marondedze, Janet Wheeler, Chris Gehring, Helen Ruth Irving
Software Mentions: 1
Published: about 11 years ago

10.3389/fpls.2020.01053

Wheat Line “RYNO3936” Is Associated With Delayed Water Stress-Induced Leaf Senescence and Rapid Water-Deficit Stress Recovery
Cited by: 10
Author(s): Marlon-Schylor L. le Roux, N. Francois V. Burger, Maré Vlok, K. Kunert, Christopher A. Cullis, Anna‐Maria Botha
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2021.663707

dsRNA Molecules From the Tobacco Mosaic Virus p126 Gene Counteract TMV-Induced Proteome Changes at an Early Stage of Infection
Cited by: 5
Author(s): Naga Charan Konakalla, Mukesh Nitin, Athanasios Kaldis, Hema Masarapu, Sébastien Carpentier, Andreas E. Voloudakis
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2018.00860

Sex-Dependent Variation of Pumpkin (Cucurbita maxima cv. Big Max) Nectar and Nectaries as Determined by Proteomics and Metabolomics
Cited by: 16
Author(s): Elizabeth C. Chatt, Patrick von Aderkas, Clay J. Carter, Derek Smith, Monica L. Elliott, Basil J. Nikolau
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2012.00164

MRMaid: The SRM Assay Design Tool for Arabidopsis and Other Species
Cited by: 14
Author(s): Jun Fan, Fady Mohareb, Alexandra M. E. Jones, Conrad Bessant
Software Mentions: 1
Published: almost 14 years ago

10.3389/fpls.2019.00936

Tomato Dynamin Related Protein 2A Associates With LeEIX2 and Enhances PRR Mediated Defense by Modulating Receptor Trafficking
Cited by: 10
Author(s): Lorena Pizarro, Meirav Leibman‐Markus, Silvia Schuster, Maya Bar, Adi Avni
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2020.569552

Putative Bifunctional Chorismate Mutase/Prephenate Dehydratase Contributes to the Virulence of Acidovorax citrulli
Cited by: 9
Author(s): Minyoung Kim, Jong-Chan Lee, Lynn Heo, Sang-Wook Han
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2016.02023

Proteome Analysis Reveals Extensive Light Stress-Response Reprogramming in the Seagrass Zostera muelleri (Alismatales, Zosteraceae) Metabolism
Cited by: 40
Author(s): Manoj Kumar, Matthew P. Padula, Peter A. Davey, Mathieu Pernice, Zhijian Jiang, Gaurav Sablok, Loretto Contreras–Porcia, Peter J. Ralph
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2020.00232

The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes
Cited by: 7
Author(s): R. N. Singh, Rohana Liyanage, Chirag Gupta, Jackson O. Lay, Andy Pereira, Clemencia M. Rojas
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2016.01314

Proteomic Studies on the Effects of Lipo-Chitooligosaccharide and Thuricin 17 under Unstressed and Salt Stressed Conditions in Arabidopsis thaliana
Cited by: 45
Author(s): Sowmyalakshmi Subramanian, Alfred Souleimanov, Donald L. Smith
Software Mentions: 1
Published: over 9 years ago

10.3389/frobt.2018.00081

Immersive VR and Education: Embodied Design Principles That Include Gesture and Hand Controls
Cited by: 150
Author(s): Mina C. Johnson-Glenberg
Software Mentions: 1
Published: over 7 years ago

10.3389/fsurg.2016.00005

Elevated Serum Levels of Alpha-Fetoprotein in Patients with Infantile Hemangioma Are Not Derived from within the Tumor
Cited by: 8
Author(s): Tinte Itinteang, Alice M. Chibnall, Reginald Marsh, Jonathan C. Dunne, Sophie de Jong, Paul F. Davis, Philip Leadbitter, Swee T. Tan
Software Mentions: 1
Published: almost 10 years ago

10.3389/fsurg.2015.00026

Expression of Cathepsins B, D, and G in Infantile Hemangioma
Cited by: 21
Author(s): Tinte Itinteang, Daria A. Chudakova, Jonathan C. Dunne, Paul F. Davis, Swee T. Tan
Software Mentions: 1
Published: over 10 years ago

10.3389/fnsyn.2015.00020

Physical Interactions and Functional Relationships of Neuroligin 2 and Midbrain Serotonin Transporters
Cited by: 10
Author(s): Ran Ye, Meagan A. Quinlan, Hideki Iwamoto, Hao Wu, Noah H. Green, Christopher S. Jetter, Douglas G. McMahon, Jeremy Veestra-VanderWeele, Pat Levitt, Randy D. Blakely
Software Mentions: 1
Published: almost 10 years ago

10.3389/fvets.2019.00418

Salivary Scavenger and Agglutinin (SALSA) Is Expressed in Mucosal Epithelial Cells and Decreased in Bronchial Epithelium of Asthmatic Horses
Cited by: 4
Author(s): Gary Kwok Cheong Lee, Laurence Tessier, Dorothee Bienzle
Software Mentions: 1
Published: about 6 years ago

10.3389/fvets.2018.00141

Development of a Multidimensional Proteomic Approach to Detect Circulating Immune Complexes in Cattle Experimentally Infected With Mycobacterium bovis
Cited by: 6
Author(s): Syeda A. Hadi, W. Ray Waters, Mitchell V. Palmer, Konstantin P. Lyashchenko, Srinand Sreevatsan
Software Mentions: 1
Published: over 7 years ago

10.3389/fvets.2018.00040

Trypanosoma equiperdum Low Molecular Weight Proteins As Candidates for Specific Serological Diagnosis of Dourine
Cited by: 10
Author(s): Mirella Luciani, Tiziana Di Febo, Massimiliano Orsini, Ivanka Krasteva, Angela Cattaneo, Michele Podaliri Vulpiani, Chiara Di Pancrazio, Ángela Bachi, Manuela Tittarelli
Software Mentions: 1
Published: over 7 years ago

10.1186/1742-9994-11-41

Litter size manipulation in laboratory mice: an example of how proteomic analysis can uncover new mechanisms underlying the cost of reproduction
Cited by: 17
Author(s): Marine Plumel, Antoine Stier, Danièle Thiersé, Alain Van Dorsselaer, François Criscuolo, Fabrice Bertile
Software Mentions: 1
Published: over 11 years ago

10.1007/s10142-019-00694-z

Exploiting the reference genome sequence of hexaploid wheat: a proteomic study of flour proteins from the cultivar Chinese Spring
Cited by: 22
Author(s): Susan B. Altenbach, Han-Chang Chang, Annamaria Simon-Buss, Toni Mohr, Naxin Huo, Yong Gu
Software Mentions: 1
Published: over 6 years ago

10.1016/j.funbio.2012.07.004

Expression and secretion of Aspergillus fumigatus proteases are regulated in response to different protein substrates
Cited by: 50
Author(s): Edward John Farnell, Karine Rousseau, David J. Thornton, Paul Bowyer, Sarah E. Herrick
Software Mentions: 1
Published: over 13 years ago

10.1534/g3.114.012625

Histone H2B Ubiquitination Promotes the Function of the Anaphase-Promoting Complex/Cyclosome inSchizosaccharomyces pombe
Cited by: 12
Author(s): Zachary C. Elmore, Janel R. Beckley, Jun‐Song Chen, Kathleen L. Gould
Software Mentions: 1
Published: over 11 years ago

10.1534/g3.116.035675

Candida albicans Is Resistant to Polyglutamine Aggregation and Toxicity
Cited by: 6
Author(s): Michelle Leach, TaeHyung Kim, Sonja E. DiGregorio, Cathy Collins, Zhaolei Zhang, Martin L. Duennwald, Leah E. Cowen
Software Mentions: 1
Published: almost 9 years ago

10.1534/g3.118.200877

Identifying Pseudomonas syringae Type III Secreted Effector Function via a Yeast Genomic Screen
Cited by: 15
Author(s): Ahwon Lee, D. Patrick Bastedo, Ji‐Young Youn, Timothy Lo, Maggie A. Middleton, Inga Kireeva, Jee Yeon Lee, Sara Sharifpoor, Anastasia Baryshnikova, Jianfeng Zhang, Pauline W. Wang, Sergio G. Peisajovich, Michael Constanzo, Brenda Andrews, Charles Boone, Darrell Desveaux, David S. Guttman
Software Mentions: 1
Published: almost 7 years ago

10.1534/g3.119.400863

Nonsynonymous Mutations in Linker-2 of the Pdr5 Multidrug Transporter Identify a New RNA Stability Element
Cited by: 3
Author(s): Hadiar Rahman, Andrew Rudrow, Joshua Carneglia, Sister Stephen Patrick Joly, Dante Nicotera, Michael J. Naldrett, John S. Choy, Suresh V. Ambudkar, John Golin
Software Mentions: 1
Published: almost 6 years ago

10.1093/gastro/gou066

Bile proteomics for differentiation of malignant from benign biliary strictures: a pilot study
Cited by: 37
Author(s): Udayakumar Navaneethan, Vennisvasanth Lourdusamy, Preethi G.K. Venkatesh, Belinda Willard, Madhusudhan R. Sanaka, Mansour A. Parsi
Software Mentions: 1
Published: about 11 years ago

10.3390/genes11040449

Ecological Processes Affecting Long-Term Eukaryote and Prokaryote Biofilm Persistence in Nitrogen Removal from Sewage
Cited by: 3
Author(s): Inga Leena Angell, Linda Bergaust, Jon Fredrik Hanssen, Else Marie Aasen, Knut Rudi
Software Mentions: 1
Published: over 5 years ago

10.3390/genes12030397

Expansion and Diversification of Fluorescent Protein Genes in Fifteen Acropora Species during the Evolution of Acroporid Corals
Cited by: 4
Author(s): Rio Kashimoto, Kanako Hisata, Chuya Shinzato, Noriyuki Satoh, Eiichi Shoguchi
Software Mentions: 1
Published: over 4 years ago

10.1534/genetics.119.302558

Germ Cell Lineage Homeostasis in Drosophila Requires the Vasa RNA Helicase
Cited by: 13
Author(s): Zeljko Durdevic, Anne Ephrussi
Software Mentions: 1
Published: about 6 years ago

10.1186/gb-2007-8-3-r34

Hawkeye: an interactive visual analytics tool for genome assemblies
Cited by: 80
Author(s): Michael C. Schatz, Adam M. Phillippy, Ben Shneiderman, Steven L. Salzberg
Software Mentions: 1
Published: almost 19 years ago

10.1186/gb-2013-14-10-r119

A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation
Cited by: 267
Author(s): Mario Iurlaro, Gabriella Ficz, David Oxley, Eun‐Ang Raiber, Martin Bachman, Michael J. Booth, Simon Andrews, Shankar Balasubramanian, Wolf Reik
Software Mentions: 1
Published: almost 13 years ago

10.1186/s13059-015-0582-8

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome
Cited by: 231
Author(s): Jarrod Chapman, Martin Mascher, Aydın Buluç, Kerrie Barry, Evangelos Georganas, Adam M. Session, Veronika Strnadova, Jerry Jenkins, Sunish K. Sehgal, Leonid Oliker, Jeremy Schmutz, Katherine Yelick, Uwe Scholz, Robbie Waugh, Jesse Poland, Gary J. Muehlbauer, Nils Stein, Daniel S. Rokhsar
Software Mentions: 1
Published: almost 11 years ago

10.1093/gigascience/giaa045

Sequencing smart: De novo sequencing and assembly approaches for a non-model mammal
Cited by: 15
Author(s): Graham Etherington, Darren Heavens, David Baker, Ashleigh Lister, Rose McNelly, G Accinelli Garcia, Bernardo Clavijo, Iain C. Macaulay, Wilfried Haerty, Federica Di Palma
Software Mentions: 1
Published: over 5 years ago

10.1093/glycob/cwz029

Characterizing the selectivity of ER α-glucosidase inhibitors
Cited by: 14
Author(s): Sarah O’Keefe, Quentin P. Roebuck, Namiki Izumi, Shuichi Hirono, Atsushi Kato, Robert J. Nash, Stephen High
Software Mentions: 1
Published: over 6 years ago

10.1007/s13577-012-0053-4

Proteomic analysis of differential protein expression by brain metastases of gynecological malignancies
Cited by: 34
Author(s): Ayako Yoshida, Naoki Okamoto, Akiko Tozawa-Ono, Hirotaka Koizumi, Kazushige Kiguchi, Bunpei Ishizuka, Toshio Kumai, Nao Suzuki
Software Mentions: 1
Published: over 12 years ago

10.1128/IAI.00255-15

Persistent Staphylococcus aureus Isolates from Two Independent Cases of Bacteremia Display Increased Bacterial Fitness and Novel Immune Evasion Phenotypes
Cited by: 29
Author(s): Rebecca Richards, Richard D. Haigh, Ben Pascoe, Samuel K. Sheppard, Francis W. Price, David R. Jenkins, Kumar Rajakumar, Julie A. Morrissey
Software Mentions: 1
Published: over 10 years ago

10.1128/IAI.00386-17

Salmonella enterica Serovar Typhimurium Alters the Extracellular Proteome of Macrophages and Leads to the Production of Proinflammatory Exosomes
Cited by: 61
Author(s): Winnie W. Hui, Kamil Hercík, Sayali Belsare, Navatha Alugubelly, Beata Clapp, Carlos Rinaldi, Mariola J. Edelmann
Software Mentions: 1
Published: almost 8 years ago

10.1128/IAI.00673-20

The Yersinia pestis GTPase BipA Promotes Pathogenesis of Primary Pneumonic Plague
Cited by: 4
Author(s): Samantha D Crane, Srijon Kaushik Banerjee, Kara R. Eichelberger, Richard C. Kurten, William E. Goldman, Roger D. Pechous
Software Mentions: 1
Published: almost 5 years ago

10.1007/s10753-019-00957-8

Chinese Birch Pollen Allergy and Immunotherapy in Mice
Cited by: 10
Author(s): Zhibo Xie, Jie Yin
Software Mentions: 1
Published: almost 7 years ago

10.3390/insects10090282

The Effect of Diet on the Composition and Stability of Proteins Secreted by Honey Bees in Honey
Cited by: 18
Author(s): Oleg Lewkowski, Carmen Ioana Mureşan, Dirk Dobritzsch, Matthew Fuszard, Silvio Erler
Software Mentions: 1
Published: about 6 years ago

10.1590/S1677-5538.IBJU.2020.02.07

Editorial Comment: New Insights on the Mechanisms Affecting Fertility in Men with Non-Seminoma Testicular Cancer before Cancer Therapy.
Cited by: 0
Author(s): Gustavo Cardoso Guimarães
Software Mentions: 1
Published: almost 6 years ago

10.1172/jci.insight.96184

Nox4 reprograms cardiac substrate metabolism via protein O-GlcNAcylation to enhance stress adaptation
Cited by: 43
Author(s): Adam Nabeebaccus, Anna Zoccarato, Anne Dragøy Hafstad, Célio X.C. Santos, Ellen Aasum, Alison C. Brewer, Min Zhang, Matteo Beretta, Xiaoke Yin, James A. West, Katrin Schröder, Julian L. Griffin, Thomas R. Eykyn, E. Dale Abel, Manuel Mayr, Ajay M. Shah
Software Mentions: 1
Published: almost 8 years ago

10.1172/jci.insight.135923

Elevating EGFR-MAPK program by a nonconventional Cdc42 enhances intestinal epithelial survival and regeneration
Cited by: 16
Author(s): Xiao Zhang, Sheila Bandyopadhyay, Leandro Araújo, Kevin Tong, Juan Flores, Daniel Laubitz, Yanlin Zhao, George Yap, Jingren Wang, Qingze Zou, Ronaldo P. Ferraris, Lanjing Zhang, Wenwei Hu, Edward M. Bonder, Pawel R. Kiela, Robert J. Coffey, Michael P. Verzi, Ivaylo I. Ivanov, Nan Gao
Software Mentions: 1
Published: over 5 years ago

10.1172/jci.insight.142073

Early defects in mucopolysaccharidosis type IIIC disrupt excitatory synaptic transmission
Cited by: 7
Author(s): Camila Pará, Poulomee Bose, L. Travi Bruno, Erika Freemantle, Mahsa Taherzadeh, Xuefang Pan, Chanshuai Han, Peter S. McPherson, Jean-Claude Lacaille, Éric Bonneil, Pierre Thibault, Claire O’Leary, Brian Bigger, Carlos R. Morales, Graziella Di Cristo, Alexey V. Pshezhetsky
Software Mentions: 1
Published: over 4 years ago

10.1016/j.jaci.2017.01.039

Proteomic analysis of filaggrin deficiency identifies molecular signatures characteristic of atopic eczema
Cited by: 42
Author(s): Martina S. Elias, Heather A. Long, Carla F. Newman, P. David Wilson, Andrew B. West, Paul McGill, Keith Wu, Michael Donaldson, Nick J. Reynolds
Software Mentions: 1
Published: about 8 years ago

10.1128/JB.00099-20

YjbH Requires Its Thioredoxin Active Motif for the Nitrosative Stress Response, Cell-to-Cell Spread, and Protein-Protein Interactions in Listeria monocytogenes
Cited by: 4
Author(s): Brittany R. Ruhland
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.M113.463372

Comparative Proteomic Analysis of Supportive and Unsupportive Extracellular Matrix Substrates for Human Embryonic Stem Cell Maintenance
Cited by: 53
Author(s): Despina Soteriou, Banu İskender, Adam Byron, Jonathan D. Humphries, Simon Borg–Bartolo, Marie-Claire Haddock, M. Baxter, David Knight, Martin J. Humphries, Susan J. Kimber
Software Mentions: 1
Published: over 12 years ago

10.1074/jbc.M113.453373

Characterization of Proprotein Convertase Subtilisin/Kexin Type 9 (PCSK9) Trafficking Reveals a Novel Lysosomal Targeting Mechanism via Amyloid Precursor-like Protein 2 (APLP2)
Cited by: 56
Author(s): Rachel M. DeVay, David L. Shelton, Lei Hong
Software Mentions: 1
Published: over 12 years ago

10.1074/jbc.M114.550657

Norovirus Translation Requires an Interaction between the C Terminus of the Genome-linked Viral Protein VPg and Eukaryotic Translation Initiation Factor 4G
Cited by: 53
Author(s): Liliane Chung, Dalan Bailey, Eoin N Leen, Edward Emmott, Yasmin Chaudhry, Lisa O. Roberts, Stephen Curry, Nicolas Locker, Ian Goodfellow
Software Mentions: 1
Published: over 11 years ago

10.1074/jbc.M114.590471

A Conformational Sampling Model for Radical Catalysis in Pyridoxal Phosphate- and Cobalamin-dependent Enzymes
Cited by: 5
Author(s): Binuraj R. K. Menon, Karl Fisher, Stephen E. J. Rigby, Nigel S. Scrutton, D. Leys
Software Mentions: 1
Published: about 11 years ago

10.1074/jbc.M115.677419

Conserved Overlapping Gene Arrangement, Restricted Expression, and Biochemical Activities of DNA Polymerase ν (POLN)
Cited by: 10
Author(s): Kei-ichi Takata, Junya Tomida, Shelley Reh, Lisa M. Swanhart, Minoru Takata, Neil A. Hukriede, Richard D. Wood
Software Mentions: 1
Published: about 10 years ago

10.1074/jbc.M115.661439

Bacterial Rotary Export ATPases Are Allosterically Regulated by the Nucleotide Second Messenger Cyclic-di-GMP
Cited by: 82
Author(s): Eleftheria Trampari, C.E.M. Stevenson, Richard Little, Thomas Wilhelm, David M. Lawson, Jacob G. Malone
Software Mentions: 1
Published: about 10 years ago

10.1074/jbc.M116.724344

Unexpected Activity of a Novel Kunitz-type Inhibitor
Cited by: 28
Author(s): David W. Smith, Irina G. Tikhonova, Heather Jewhurst, Orla Drysdale, Jan Dvořák, Mark W. Robinson, Krystyna Cwiklinski, John P. Dalton
Software Mentions: 1
Published: over 9 years ago

10.1074/jbc.M116.758003

The Shigella Virulence Factor IcsA Relieves N-WASP Autoinhibition by Displacing the Verprolin Homology/Cofilin/Acidic (VCA) Domain
Cited by: 17
Author(s): Rui Mauricio, Cy M. Jeffries, Dmitri I. Svergun, Janet E. Deane
Software Mentions: 1
Published: almost 9 years ago

10.1074/jbc.RA118.001777

Stat3-mediated alterations in lysosomal membrane protein composition
Cited by: 24
Author(s): Bethan Lloyd-Lewis, Caroline C. Krueger, Timothy J. Sargeant, Michael D’Angelo, Michael J. Deery, Renata Feret, Julie A. Howard, Kathryn S. Lilley, Christine J. Watson
Software Mentions: 1
Published: almost 8 years ago

10.1074/jbc.RA117.001483

Structural and compositional diversity of fibrillin microfibrils in human tissues
Cited by: 51
Author(s): Alexander Eckersley, Kieran T. Mellody, Suzanne M. Pilkington, Christopher E.M. Griffiths, Rachel Watson, Ronan O’Cualain, Clair Baldock, David Knight, Michael J. Sherratt
Software Mentions: 1
Published: over 7 years ago

10.1074/jbc.M117.789305

Intestinal mucin activates human dendritic cells and IL-8 production in a glycan-specific manner
Cited by: 21
Author(s): Felipe Melo-González, Thomas M. Fenton, Cecilia Forss, Catherine Smedley, Anu Goenka, Andrew S. MacDonald, David J. Thornton, Mark A. Travis
Software Mentions: 1
Published: over 7 years ago

10.1074/jbc.RA118.006452

Substitutions in the β subunits of sickle-cell hemoglobin improve oxidative stability and increase the delay time of sickle-cell fiber formation
Cited by: 9
Author(s): Fantao Meng, Tigist Kassa, Michael Brad Strader, Jayashree Soman, John S. Olson
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA120.014616

ELK-1 ubiquitination status and transcriptional activity are modulated independently of F-Box protein FBXO25
Cited by: 2
Author(s): Reyna Sara Quintero-Barceinas, Franziska Gehringer, Charles Ducker, Janice Saxton, Peter E. Shaw
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.jbc.2021.100278

Proteomic identification and validation of novel interactions of the putative tumor suppressor PRELP with membrane proteins including IGFI-R and p75NTR
Cited by: 8
Author(s): Hirofumi Kosuge, Makoto Nakakido, Satoru Nagatoishi, Tetsuya Fukuda, Yoshio Bando, Shin-ichi Ohnuma, Kouhei Tsumoto
Software Mentions: 1
Published: almost 5 years ago

10.1074/jbc.RA120.015162

The deubiquitinase TRABID stabilizes the K29/K48-specific E3 ubiquitin ligase HECTD1
Cited by: 18
Author(s): Lee D. Harris, Janic Le Pen, Nico Scholz, Juliusz Mieszczanek, Natalie Vaughan, Simon Davis, G. Berridge, Benedikt M. Kessler, Mariann Bienz, Julien Licchesi
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.jbc.2021.100639

The multidomain architecture of a bacteriophage endolysin enables intramolecular synergism and regulation of bacterial lysis
Cited by: 10
Author(s): Frank Oechslin, Carmen Menzi, Philippe Moreillon, Grégory Resch
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.jbc.2021.100690

Tolerance to nascent protein misfolding stress requires fine-tuning of the cAMP/PKA pathway
Cited by: 4
Author(s): Paraskevi Kritsiligkou, Karol Nowicki-Osuch, Zorana Carter, Christopher J. Kershaw, Declan R. Creamer, Alan J. Weids, Chris M. Grant
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.jbc.2021.101079

Phosphorylation of slit diaphragm proteins NEPHRIN and NEPH1 upon binding of HGF promotes podocyte repair
Cited by: 3
Author(s): Ashish K. Solanki, Ehtesham Arif, Pankaj Srivastava, Christopher M. Furcht, Bushra Rahman, Pei Wen, Avinash Singh, Lawrence B. Holzman, Wayne R. Fitzgibbon, Milos N. Budisavljevic, Glenn P. Lobo, Sang Ho Kwon, Zhe Han, Matthew J. Lazzara, Joshua H. Lipschutz, Deepak Nihalani
Software Mentions: 1
Published: over 4 years ago

10.1186/s13036-019-0177-0

Functional cellulose-based hydrogels as extracellular matrices for tissue engineering
Cited by: 106
Author(s): Sayan Deb Dutta, Dinesh Kumar Patel, Ki-Taek Lim
Software Mentions: 1
Published: over 6 years ago

10.14440/jbm.2016.129

Serum proteins are extracted along with monolayer cells in plasticware and interfere with protein analysis
Cited by: 8
Author(s): Xin Hong, Yuling Meng, Steven N. Kalkanis
Software Mentions: 1
Published: over 9 years ago

10.7150/jca.40964

Quantitative proteomic analysis of bile in extrahepatic cholangiocarcinoma patients
Cited by: 15
Author(s): Kuk Hui Son, Chi Bum Ahn, Hyo Jung Kim, Jae Seon Kim
Software Mentions: 1
Published: almost 6 years ago

10.1083/jcb.201802088

Cell adhesion is regulated by CDK1 during the cell cycle
Cited by: 104
Author(s): Max Jones, Janet A. Askari, Jonathan D. Humphries
Software Mentions: 1
Published: over 7 years ago

10.1083/jcb.201709137

Phosphorylation of IRE1 at S729 regulates RIDD in B cells and antibody production after immunization
Cited by: 42
Author(s): Chih-Hang Anthony Tang, Shiun Chang, Adrienne W. Paton, James C. Paton, Dmitry I. Gabrilovich, Hidde L. Ploegh, Juan R. Del Valle, Chih‐Chi Andrew Hu
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0058463

Structural Insights into the Mechanism of Phosphoregulation of the Retinoblastoma Protein
Cited by: 15
Author(s): Ekaterina P. Lamber, Fabienne Beuron, Edward P. Morris, Dmitri I. Svergun, Sibylle Mittnacht
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0207897

Hypervirulent group A Streptococcus emergence in an acaspular background is associated with marked remodeling of the bacterial cell surface
Cited by: 13
Author(s): Jessica Galloway-Peña, Sruti DebRoy, Chelcy E Brumlow, Xiqi Li, Truc T. Tran, Nicola Horstmann, Hui Yao, Ken Chen, Fang Wang, Bih Fang Pan, David H. Hawke, Erika J. Thompson, César A. Arias, Vance G. Fowler, Micah M. Bhatti, Awdhesh Kalia, Anthony R. Flores, Samuel A. Shelburne
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0039338

Fragile Mental Retardation Protein Interacts with the RNA-Binding Protein Caprin1 in Neuronal RiboNucleoProtein Complexes
Cited by: 56
Author(s): Rachid El Fatimy, Sarah Tremblay, Alain Y. Dury, Samuel Solomon, Paul De Koninck, John W. Schrader, Édouard W. Khandjian
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0074701

Identification of a Novel and Unique Transcription Factor in the Intraerythrocytic Stage of Plasmodium falciparum
Cited by: 12
Author(s): Kanako Komaki-Yasuda, Mitsuru Okuwaki, Kyosuke Nagata, Shin-ichiro Kawazu, Shigeyuki Kano
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0147203

Analysis of Phosphorylation of the Receptor-Like Protein Kinase HAESA during Arabidopsis Floral Abscission
Cited by: 24
Author(s): Isaiah Taylor, Ying Wang, Kati Seitz, John M. Baer, Stefan Bennewitz, Brian Mooney, John C. Walker
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0225864

Prolonged fasting followed by refeeding modifies proteome profile and parvalbumin expression in the fast-twitch muscle of pacu (Piaractus mesopotamicus)
Cited by: 5
Author(s): Rafaela Nunes da Silva‐Gomes, Maria Laura Gabriel Kuniyoshi, Bruno Oliveira da Silva Duran, Bruna Tereza Thomazini Zanella, Paula Paccielli Freire, Tassiana Gutierrez de Paula, Bruno Evaristo de Almeida Fantinatti, Rondinelle Artur Simões Salomão, Robson Francisco Carvalho, Lucilene Delazari dos Santos, Maeli Dal-Pai-Silva
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0015960

Histone Variants and Their Post-Translational Modifications in Primary Human Fat Cells
Cited by: 32
Author(s): Åsa Jufvas, Peter Strålfors, Alexander V. Vener
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0059462

Alix Serves as an Adaptor That Allows Human Parainfluenza Virus Type 1 to Interact with the Host Cell ESCRT System
Cited by: 13
Author(s): Jim Boonyaratanakornkit, Henrick Schomacker, Peter L. Collins, Alexander Schmidt
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0164993

A High-Yield Two-Hour Protocol for Extraction of Human Hair Shaft Proteins
Cited by: 22
Author(s): Sing Ying Wong, Ching Chin Lee, Ali Ashrafzadeh, Sarni Mat Junit, Noor Nazirahanie Abrahim, Onn Haji Hashim
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0028017

Role of Collagens and Perlecan in Microvascular Stability: Exploring the Mechanism of Capillary Vessel Damage by Snake Venom Metalloproteinases
Cited by: 70
Author(s): Teresa Escalante, Natalia Ortiz, Alexandra Rucavado, Eladio Flores Sánchez, Michael Richardson, Jay W. Fox, José Marı́a Gutiérrez
Software Mentions: 1
Published: almost 14 years ago

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