Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Scaffold
https://packages.ecosyste.ms/registries/pypi.org/packages/Scaffold
Simple project scaffolding for Python
5 versions
Latest release: about 1 year ago
343 downloads last month
Papers Mentioning Scaffold 1,866
10.1371/journal.pone.0164993
A High-Yield Two-Hour Protocol for Extraction of Human Hair Shaft ProteinsCited by: 22
Author(s): Sing Ying Wong, Ching Chin Lee, Ali Ashrafzadeh, Sarni Mat Junit, Noor Nazirahanie Abrahim, Onn Haji Hashim
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0028017
Role of Collagens and Perlecan in Microvascular Stability: Exploring the Mechanism of Capillary Vessel Damage by Snake Venom MetalloproteinasesCited by: 70
Author(s): Teresa Escalante, Natalia Ortiz, Alexandra Rucavado, Eladio Flores Sánchez, Michael Richardson, Jay W. Fox, José Marı́a Gutiérrez
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0057282
Distinct Roles of Molecular Chaperones HSP90α and HSP90β in the Biogenesis of KCNQ4 ChannelsCited by: 33
Author(s): Yanhong Gao, Sergey Yechikov, Aitor Vázquez, Dongyang Chen, Liping Nie
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0095007
Absence of Metalloprotease GP63 Alters the Protein Content of Leishmania ExosomesCited by: 89
Author(s): Kasra Hassani, Marina Tiemi Shio, Caroline Martel, Denis Faubert, Martin Olivier
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0061916
The Tyrosine Phosphatase PTPN14 Is a Negative Regulator of YAP ActivityCited by: 73
Author(s): Chrysiis Michaloglou, Waltraut Lehmann, Typhaine Martin, Clara Delaunay, Andreas Hueber, Louise Barys, Honglin Niu, Éric Billy, Markus Wartmann, Moriko Ito, Christopher J. Wilson, Mary Ellen Digan, Andreas Bauer, Hans Voshol, Gerhard Christofori, William R. Sellers, Francesco Hofmann, Tobias Schmelzle
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0103326
SecDF as Part of the Sec-Translocase Facilitates Efficient Secretion of Bacillus cereus Toxins and Cell Wall-Associated ProteinsCited by: 19
Author(s): Aniko Vörös, Roger Simm, Leyla Slamti, Matthew J. McKay, Ida K. Hegna, Christina Nielsen-LeRoux, Karl A. Hassan, Ian T. Paulsen, Didier Lereclus, Ole Andreas Økstad, Mark P. Molloy, Anne Brit Kolstø
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0199227
Influenza D virus M2 protein exhibits ion channel activity in Xenopus laevis oocytesCited by: 14
Author(s): Evan Kesinger, Jianing Liu, Aaron Jensen, Catherine P. Chia, Andrew Demers, Hideaki Moriyama
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0149132
Characterization and Vaccine Potential of Outer Membrane Vesicles Produced by Haemophilus parasuisCited by: 39
Author(s): William D. McCaig, Crystal L. Loving, Holly R. Hughes, Susan L. Brockmeier
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0169552
Dispersion of Nanoparticles in Different Media Importantly Determines the Composition of Their Protein CoronaCited by: 102
Author(s): Klemen Strojan, Adrijana Leonardi, Vladimir B. Bregar, Igor Križaj, Jurij Svete, Mojca Pavlin
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0214059
HTLV-1 Tax-1 interacts with SNX27 to regulate cellular localization of the HTLV-1 receptor molecule, GLUT1Cited by: 17
Author(s): Jacob Al-Saleem, Wessel P. Dirksen, Michael P. Martinez, Nikoloz Shkriabai, Mamuka Kvaratskhelia, Lee Ratner, Patrick L. Green
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0083864
Molecular Characterization of Trypanosoma cruzi SAP Proteins with Host-Cell Lysosome Exocytosis-Inducing Activity Required for Parasite InvasionCited by: 13
Author(s): Tamiris Zanforlin, Ethel Bayer-Santos, Cristian Cortéz, Igor C. Almeida, Nobuko Yoshida, José Franco da Silveira
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0114594
CRISPR-Cas9-Based Knockout of the Prion Protein and Its Effect on the ProteomeCited by: 49
Author(s): Mohadeseh Mehrabian, Brethour Dylan, Sarah E MacIsaac, Jin Kyu Kim, C. Geeth Gunawardana, Hansen Wang, Gerold Schmitt‐Ulms
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0181910
iTRAQ protein profile analysis of developmental dynamics in soybean [Glycine max (L.) Merr.] leavesCited by: 8
Author(s): Jun Qin, Jianan Zhang, Fengmin Wang, Jinghua Wang, Zhi Zheng, Chang-Cheng Yin, Hao Chen, Ainong Shi, Bo Zhang, Pengyin Chen, Mengchen Zhang
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0127943
Proteomic Identification of DNA-PK Involvement within the RET Signaling PathwayCited by: 6
Author(s): Lyle Burdine, Marie Schluterman Burdine, Linley E. Moreland, Brad Fogel, Lisa Orr, Justin James, Richard H. Turnage, Alan J. Tackett
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0109885
Enhancement of Synthetic Trichoderma-Based Enzyme Mixtures for Biomass Conversion with an Alternative Family 5 Glycosyl Hydrolase from Sporotrichum thermophileCited by: 12
Author(s): Zhuoliang Ye, Yun Zheng, Bingyao Li, Melissa S. Borrusch, Reginald Storms, Jonathan D. Walton
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0049506
Lactobacillus Proteins Are Associated with the Bactericidal Activity against E. coli of Female Genital Tract SecretionsCited by: 53
Author(s): Sabah Kalyoussef, Edward Nieves, Ellen Dinerman, Colleen Carpenter, Viswanathan Shankar, Jamie Oh, Berta Burd, Ruth Hogue Angeletti, Karen W. Buckheit, David N. Fredricks, Rebecca Pellett Madan, Marla J. Keller, Betsy C. Herold
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0025561
Functional Analysis of the Magnetosome Island in Magnetospirillum gryphiswaldense: The mamAB Operon Is Sufficient for Magnetite BiomineralizationCited by: 152
Author(s): Anna Lohße, Susanne Ullrich, Emanuel Katzmann, Sarah Borg, G. Wanner, Michael Richter, Birgit Voigt, Thomas Schweder, Dirk Schüler
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0051956
Differentiating Inbred Mouse Strains from Each Other and Those with Single Gene Mutations Using Hair ProteomicsCited by: 26
Author(s): Robert H. Rice, Katie M. Bradshaw, Blythe Durbin‐Johnson, David M. Rocke, Richard A. Eigenheer, Brett S. Phinney, John P. Sundberg
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0008842
Complete Genome Sequence of the Multiresistant Taxonomic Outlier Pseudomonas aeruginosa PA7Cited by: 226
Author(s): Paul H. Roy, Sasha G. Tetu, Alain Larouche, Liam D. H. Elbourne, Sylvie Tremblay, Qinghu Ren, Robert J. Dodson, Derek M. Harkins, Ryan Shay, Kisha Watkins, Yasmin Mahamoud, Ian T. Paulsen
Software Mentions: 1
Published: almost 15 years ago
10.1371/journal.pone.0221431
Flagella-dependent inhibition of biofilm formation by sub-inhibitory concentration of polymyxin B in Vibrio choleraeCited by: 26
Author(s): Sean Giacomucci, Candice Danabé-Nieto Cros, Xavier Perron, Annabelle Mathieu-Denoncourt, Marylise Duperthuy
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0154957
Secretome Profiling of Periodontal Ligament from Deciduous and Permanent Teeth Reveals a Distinct Expression Pattern of Laminin ChainsCited by: 6
Author(s): Priscila Alves Giovani, Cristiane R. Salmon, Luciane Martins, Adriana Franco Paes Leme, Pedro Diniz Rebouças, Regina Maria Puppin-Rontani, Luciana Souto Mofatto, Enílson Antônio Sallum, Francisco Humberto Nociti, Kamila Rosamilia Kantovitz
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0170294
Differences in Beef Quality between Angus (Bos taurus taurus) and Nellore (Bos taurus indicus) Cattle through a Proteomic and Phosphoproteomic ApproachCited by: 68
Author(s): Rafael Torres de Souza Rodrigues, Antônio Chizzotti, Camilo Elber Vital, Maria Cristina Baracat‐Pereira, Edvaldo Barros, Karina Costa Busato, R. A. Gomes, Márcio Machado Ladeira, Tereza Silva Martins
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0207789
Identification of midgut membrane proteins from different instars of Helicoverpa armigera (Lepidoptera: Noctuidae) that bind to Cry1Ac toxinCited by: 13
Author(s): Igor Henrique Sena da Silva, Isabel Gómez, Jorge Sánchez, Diana L. Martínez de Castro, Fernando Hercos Valicente, Mário Soberón, Ricardo Antônio Polanczyk, Alejandra Bravo
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0051847
Cyclin-Dependent Kinase 6 Phosphorylates NF-κB P65 at Serine 536 and Contributes to the Regulation of Inflammatory Gene ExpressionCited by: 68
Author(s): H Buss, Katja Handschick, Nadine Jurrmann, Pirita Pekkonen, Knut Beuerlein, H.‐Arno J. Müller, Robin Wait, Jeremy Saklatvala, Päivi M. Ojala, M. Lienhard Schmitz, Michael Naumann, Michael Kracht
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0133270
A Proteomic Analysis of Individual and Gender Variations in Normal Human Urine and Cerebrospinal Fluid Using iTRAQ QuantificationCited by: 53
Author(s): Zhengguang Guo, Yang Zhang, Lili Zou, Danqi Wang, Chen Shao, Yajie Wang, Wei Sun, Liwei Zhang
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0035544
Identification of Protein Networks Involved in the Disease Course of Experimental Autoimmune Encephalomyelitis, an Animal Model of Multiple SclerosisCited by: 32
Author(s): Annelies Vanheel, Ruth Daniels, Stéphane Plaisance, Kurt Baeten, Jerome J. A. Hendriks, Pierre Leprince, Debora Dumont, Johan Robben, Bert Brône, Piet Stinissen, Jean-Paul Noben, Niels Hellings
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0048241
The Arabidopsis thaliana Immunophilin ROF1 Directly Interacts with PI(3)P and PI(3,5)P2 and Affects Germination under Osmotic StressCited by: 22
Author(s): Debora Karali, David Oxley, John Runions, Nicholas T. Ktistakis, Theodora Farmaki
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0069473
Early Insights into the Function of KIAA1199, a Markedly Overexpressed Protein in Human Colorectal TumorsCited by: 50
Author(s): Anjali Tiwari, Mirjam Schneider, Antonio Fiorino, Ritva Haider, Michał Okoniewski, Bernd Roschitzki, Anuli Uzozie, Mirco Menigatti, Josef Jiricny, Giancarlo Marra
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0084494
Albinism-Causing Mutations in Recombinant Human Tyrosinase Alter Intrinsic Enzymatic ActivityCited by: 36
Author(s): Monika B. Dolinska, Elena G. Kovaleva, Peter S. Backlund, Paul T. Wingfield, Brian P. Brooks, Yuri V. Sergeev
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0064314
Quantitative Label-Free Proteomics for Discovery of Biomarkers in Cerebrospinal Fluid: Assessment of Technical and Inter-Individual VariationCited by: 40
Author(s): Richard J. Perrin, Jacqueline E. Payton, James P. Malone, Petra Gilmore, A. Davis, Chengjie Xiong, Anne M. Fagan, R. Reid Townsend, David M. Holtzman
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0083751
Exposure to Cobalt Causes Transcriptomic and Proteomic Changes in Two Rat Liver Derived Cell LinesCited by: 40
Author(s): Matthew G. Permenter, William E. Dennis, Thomas E. Sutto, David A. Jackson, John A. Lewis, Jonathan D. Stallings
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0176450
Two serines in the distal C-terminus of the human ß1-adrenoceptor determine ß-arrestin2 recruitmentCited by: 5
Author(s): Laura Hinz, Andrea Ahles, Benjamin Ruprecht, Bernhard Küster, Stefan Engelhardt
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0085391
Malaria Protein Kinase CK2 (PfCK2) Shows Novel Mechanisms of RegulationCited by: 13
Author(s): Michele Graciotti, Mahmood M. Alam, Lev Solyakov, Ralf Schmid, Glenn A. Burley, Andrew R. Bottrill, Christian Doerig, Paul M. Cullis, Andrew B. Tobin
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0016032
Identification and Validation of Novel Cerebrospinal Fluid Biomarkers for Staging Early Alzheimer's DiseaseCited by: 155
Author(s): Richard J. Perrin, Rebecca Craig‐Schapiro, James P. Malone, Aarti R. Shah, Petra Gilmore, A. Davis, Catherine M. Roe, Elaine R. Peskind, Ge Li, Douglas Galasko, Christopher M. Clark, Joseph F. Quinn, Jeffrey Kaye, John C. Morris, David M. Holtzman, R. Reid Townsend, Anne M. Fagan
Software Mentions: 1
Published: almost 14 years ago
10.1371/journal.pone.0169259
Partial Purification of a Megadalton DNA Replication Complex by Free Flow ElectrophoresisCited by: 8
Author(s): Caroline M. Li, Yunan Miao, Robert Lingeman, Robert J. Hickey, Linda H. Malkas
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0106306
Glycosylation Variants of a β-Glucosidase Secreted by a Taiwanese Fungus, Chaetomella raphigera, Exhibit Variant-Specific Catalytic and Biochemical PropertiesCited by: 8
Author(s): Aki Yoneda, Hsion-Wen Kuo, Mayumi Ishihara, Parastoo Azadi, Su‐May Yu, Tuan‐Hua David Ho
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0160312
Systematic Proteomic Identification of the Heat Shock Proteins (Hsp) that Interact with Estrogen Receptor Alpha (ERα) and Biochemical Characterization of the ERα-Hsp70 InteractionCited by: 57
Author(s): Ahmed E. Dhamad, Zhenqi Zhou, Jianhong Zhou, Yong Du
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0046836
The Essentiality of Staphylococcal Gcp Is Independent of Its Repression of Branched-Chain Amino Acids BiosynthesisCited by: 14
Author(s): Ting Lei, Jiacheng Yang, Zheng Li, Todd W. Markowski, Bruce A. Witthuhn, Yinduo Ji
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0190834
Identification and functional analysis of SOX10 phosphorylation sites in melanomaCited by: 20
Author(s): Julia C. Cronin, Stacie K. Loftus, Laura L. Baxter, Steve Swatkoski, Marjan Guček, William J. Pavan
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0028076
The Role of the Novel Exopolyphosphatase MT0516 in Mycobacterium tuberculosis Drug Tolerance and PersistenceCited by: 62
Author(s): Seema Madhumal Thayil, Norman Morrison, Norman M. Schechter, Harvey Rubin, Petros C. Karakousis
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0177415
Proteomic analysis in the Dufour’s gland of Africanized Apis mellifera workers (Hymenoptera: Apidae)Cited by: 3
Author(s): Aparecida das Dores Teixeira, Patrícia Dias Games, Benjamin B. Katz, John M. Tomich, José Cola Zanúncio, José Éduardo Serrão
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0009797
A Live Zebrafish-Based Screening System for Human Nuclear Receptor Ligand and Cofactor DiscoveryCited by: 45
Author(s): Jens Tiefenbach, Pamela Renate Moll, Meryl R. Nelson, Chun Hu, Lilia Baev, Thomas Kislinger, Henry M. Krause
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.pone.0240617
The Salmonella Typhimurium InvF-SicA complex is necessary for the transcription of sopB in the absence of the repressor H-NSCited by: 6
Author(s): Luis E. Romero-González, Deyanira Pérez-Morales, Daniel Cortés-Avalos, Edwin Vázquez-Guerrero, Denisse A. Paredes-Hernández, Paulina Estrada-de los Santos, Lourdes Villa‐Tanaca, Miguel A. De la Cruz, J. Antonio Ibarra
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0113683
Comparative Salivary Proteome of Hepatitis B- and C-Infected PatientsCited by: 6
Author(s): Lorena Da Rós Gonçalves, Isabele Batista Campanhon, Romênia R. Domingues, Adriana Franco Paes Leme, Márcia Regina Soares
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0207483
Hyper-phosphorylation of Rb S249 together with CDK5R2/p39 overexpression are associated with impaired cell adhesion and epithelial-to-mesenchymal transition: Implications as a potential lung cancer grading and staging biomarkerCited by: 8
Author(s): Jaileene Pérez‐Morales, Darielys Mejías-Morales, Stephanie Rivera-Rivera, Jonathan González-Flores, Mónica González-Loperena, Fernando Y. Cordero-Báez, Wilfredo M Pedreira-García, Camille Chardon‐Colon, Jennifer Cabán-Rivera, W. Douglas Cress, Edna Gordián, Teresita Muñoz-Antonia, Mauricio Cabrera‐Ríos, Angel A. Isidro, Domenico Coppola, Marilin Rosa, Theresa A. Boyle, Victoria Izumi, John M. Koomen, Pedro G. Santiago‐Cardona
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0033768
The Transcriptome and Proteome of the Diatom Thalassiosira pseudonana Reveal a Diverse Phosphorus Stress ResponseCited by: 264
Author(s): Sonya T. Dyhrman, Bethany D. Jenkins, Tatiana A. Rynearson, Mak A. Saito, Melissa L. Mercier, Harriet Alexander, LeAnn P. Whitney, Andrea Drzewianowski, Vladimir V. Bulygin, Erin M. Bertrand, Zhijin Wu, Claudia R. Benitez-Nelson, Abigail Heithoff
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0103811
Detection of Mycobacterium tuberculosis Peptides in the Exosomes of Patients with Active and Latent M. tuberculosis Infection Using MRM-MSCited by: 121
Author(s): Nicole A. Kruh-Garcia, Lisa M. Wolfe, Lelia H. Chaisson, William Worodria, Payam Nahid, Jeffrey S. Schorey, J. Lucian Davis, Karen M. Dobos
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0104688
Cellular Proteins Associated with the Interior and Exterior of Vesicular Stomatitis Virus VirionsCited by: 17
Author(s): Megan Moerdyk-Schauwecker, Sun-Il Hwang, Valery Z. Grdzelishvili
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0140872
MAS C-Terminal Tail Interacting Proteins Identified by Mass Spectrometry- Based Proteomic ApproachCited by: 8
Author(s): Kalyan Tirupula, Dongmei Zhang, Appledene Osbourne, Arunachal Chatterjee, Russ Desnoyer, Belinda Willard, Sadashiva S. Karnik
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0025379
Identification of Novel NPRAP/δ-Catenin-Interacting Proteins and the Direct Association of NPRAP with Dynamin 2Cited by: 6
Author(s): Carolina Koutras, Georges Lévesque
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0079733
Plasma Peptide Biomarker Discovery for Amyotrophic Lateral Sclerosis by MALDI –TOF Mass Spectrometry ProfilingCited by: 16
Author(s): Laurence Conraux, Catherine Pech, Halim Guerraoui, Denis Loyaux, Pascual Ferrara, Jean‐Claude Guillemot, Vincent Meininger, Pierre‐François Pradat, François Salachas, Gaëlle Bruneteau, Nadine Le Forestier, Lucette Lacomblez
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0120514
A C-Type Lectin from Bothrops jararacussu Venom Disrupts Staphylococcal BiofilmsCited by: 26
Author(s): Raphael Contelli Klein, Mary Hellen Fabres-Klein, Leandro Licursi de Oliveira, Renato Neves Feio, François Malouin, Andréa de Oliveira Barros Ribon
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0212505
The digestive system in Zygentoma as an insect model for high cellulase activityCited by: 21
Author(s): Ratnasri Pothula, Derek Shirley, Omaththage P. Perera, William E. Klingeman, Cris Oppert, Heba Abdelgaffar, Brian R. Johnson, Juan Luís Jurat-Fuentes
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0095389
Quantitative Proteomic Analysis of Oral Brush Biopsies Identifies Secretory Leukocyte Protease Inhibitor as a Promising, Mechanism-Based Oral Cancer BiomarkerCited by: 20
Author(s): Ya Yang, Nelson L. Rhodus, Frank G. Ondrey, Beverly R. Wuertz, Xiaobing Chen, Yaqin Zhu, Timothy J. Griffin
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0246197
Identification of Prostaglandin F2 Receptor Negative Regulator (PTGFRN) as an internalizable target in cancer cells for antibody-drug conjugate developmentCited by: 3
Author(s): Jorge Marquez, Jianping Dong, Chun Dong, Changsheng Tian, Ginette Serrero
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0121637
Baclofen, a GABABR Agonist, Ameliorates Immune-Complex Mediated Acute Lung Injury by Modulating Pro-Inflammatory MediatorsCited by: 12
Author(s): Shufang Jin, Michael L. Merchant, Jeffrey D. Ritzenthaler, Kenneth R. McLeish, Eleanor Lederer, Edilson Torres-González, Mostafa Fraig, Michelle T. Barati, Alex B. Lentsch, Jesse Roman, Jon B. Klein, Madhavi J. Rane
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0026171
Reproducibility of an HPLC-ESI-MS/MS Method for the Measurement of Stable-Isotope Enrichment of in Vivo-Labeled Muscle ATP Synthase Beta SubunitCited by: 3
Author(s): Sarah Everman, Zhengping Yi, Paul Langlais, Lawrence J. Mandarino, Moulun Luo, Christine L. Roberts, Christos S. Katsanos
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0029672
Kinome Analysis of Receptor-Induced Phosphorylation in Human Natural Killer CellsCited by: 19
Author(s): Sebastian König, Manfred Nimtz, Maxi Scheiter, Hans‐Gustaf Ljunggren, Yenan T. Bryceson, Lothar Jänsch
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0042835
Time-Course Proteome Analysis Reveals the Dynamic Response of Cryptococcus gattii Cells to FluconazoleCited by: 18
Author(s): Hin Siong Chong, Leona T. Campbell, Matthew P. Padula, Charles Hill, Elizabeth J. Harry, Simone S. Li, Marc R. Wilkins, Ben R. Herbert, Dee Carter
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0095561
Identification of O-GlcNAc Modification Targets in Mouse Retinal Pericytes: Implication of p53 in Pathogenesis of Diabetic RetinopathyCited by: 49
Author(s): Zafer Gurel, Balyn W. Zaro, Matthew R. Pratt, Nader Sheibani
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0010317
Amino Acid Accumulation Limits the Overexpression of Proteins in Lactococcus lactisCited by: 26
Author(s): Ravi K. R. Marreddy, Eric R. Geertsma, Hjalmar P. Permentier, Joao Coelho Pinto, Jan Kok, Bert Poolman
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.pone.0049726
Improved Flow Cytometric Assessment Reveals Distinct Microvesicle (Cell-Derived Microparticle) Signatures in Joint DiseasesCited by: 126
Author(s): Bence György, Tamás Szabó, Lilla Turiák, Matthew Wright, Petra Herczeg, Zsigmond Lédeczi, Ágnes Kittel, A. A. Polgar, Kálmán Tóth, Beáta Dérfalvi, Gergő Zelenák, István Böröcz, Bob Carr, György Nagy, Károly Vékey, András Falus, Edit I. Buzás
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0029172
Lateral Gene Expression in Drosophila Early Embryos Is Supported by Grainyhead-Mediated Activation and Tiers of Dorsally-Localized RepressionCited by: 25
Author(s): Mayra García, Angelike Stathopoulos
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0176533
Lys48 ubiquitination during the intraerythrocytic cycle of the rodent malaria parasite, Plasmodium chabaudiCited by: 3
Author(s): Lorena González-López, Rebeca Carballar-Lejarazú, Gerardo Arrevillaga Boni, Leticia Cortés-Martínez, Febe Elena Cázares-Raga, Abel Trujillo‐Ocampo, Mario H. Rodrı́guez, Anthony A. James, Fidel de la Cruz Hernández-Hernández
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0118861
Evidence for Intermolecular Interactions between the Intracellular Domains of the Arabidopsis Receptor-Like Kinase ACR4, Its Homologs and the Wox5 Transcription FactorCited by: 20
Author(s): Matthew R. Meyer, Shweta Shah, J. Zhang, Henry W. Rohrs, A. Gururaj Rao
Software Mentions: 1
Published: over 9 years ago