pypi: RSeQC | Projects | Ecosyste.ms: Papers

10.1038/s41597-020-0387-9

Genome-wide gene expression profiling of the melon fly, Zeugodacus cucurbitae, during thirteen life stages
Cited by: 13
Author(s): Dong Wei, Hui-Qian Xu, Chen Dong, Suyun Zhang, Weijun Li, Guy Smagghe, Jinjun Wang
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0244985

Differential expression of αVβ3 and αVβ6 integrins in prostate cancer progression
Cited by: 11
Author(s): Fabio Quaglia, Shiv Ram Krishn, Yanqing Wang, David W. Goodrich, Peter A. McCue, Andrew V. Kossenkov, Amy C. Mandigo, Karen E. Knudsen, Paul H. Weinreb, Eva Corey, William Kevin Kelly, Lucia R. Languino
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0091851

Sequencing Degraded RNA Addressed by 3' Tag Counting
Cited by: 84
Author(s): Bárður Sigurgeirsson, Olof Emanuelsson, Joakim Lundeberg
Software Mentions: 2
Published: over 10 years ago

10.1038/srep39100

The double-domain cytidine deaminase APOBEC3G is a cellular site-specific RNA editing enzyme
Cited by: 69
Author(s): Shraddha Sharma, Santosh K. Patnaik, R. Thomas Taggart, Bora E. Baysal
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0194887

Versatile approach for functional analysis of human proteins and efficient stable cell line generation using FLP-mediated recombination system
Cited by: 28
Author(s): Roman J. Szczęsny, Katarzyna Kowalska, Kamila Kłosowska-Kosicka, Aleksander Chlebowski, Ewelina P. Owczarek, Zbigniew Warkocki, Tomasz M. Kuliński, Dorota Adamska, Kamila Affek, Agata Jędroszkowiak, Anna V. Kotrys, Rafał Tomecki, Paweł S. Krawczyk, Lukasz S. Borowski, Andrzej Dziembowski
Software Mentions: 2
Published: over 6 years ago

10.1186/s12864-021-07537-x

Comparative transcriptomic analysis of the different developmental stages of ovary in red swamp crayfish Procambarus clarkii
Cited by: 5
Author(s): Yang Zhong, Wei Zhao, Tang ZhangSheng, Liming Huang, Xiao-feng Zhu, Xiang Liang, Aifen Yan, Lu ZhiFa, Yanling Yu, Dongsheng Tang, Dapeng Wang, Zhuan-Ling Lu
Software Mentions: 2
Published: over 3 years ago

10.1186/s12864-016-2779-y

Transcriptome analysis of root response to citrus blight based on the newly assembled Swingle citrumelo draft genome
Cited by: 15
Author(s): Yunzeng Zhang, G. A. Barthe, Jude W. Grosser, Nian Wang
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-017-18404-9

RNA-seq identifies a diminished differentiation gene signature in primary monolayer keratinocytes grown from lesional and uninvolved psoriatic skin
Cited by: 33
Author(s): William R. Swindell, Mrinal K. Sarkar, Yun Liang, Xianying Xing, Jaymie Baliwag, James T. Elder, Andrew Johnston, Nicole L. Ward, Jóhann E. Guðjónsson
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-018-19392-0

Pancreatic gene expression during recovery after pancreatitis reveals unique transcriptome profiles
Cited by: 12
Author(s): Kristy Boggs, Ting Wang, Abrahim I. Orabi, Amitava Mukherjee, John F. Eisses, Tao Sun, Li Wen, Tanveer A. Javed, Farzad Esni, Wei Chen, Sohail Z. Husain
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12864-015-1603-4

Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA
Cited by: 138
Author(s): Kate M Broadbent, Jill C Broadbent, Ulf Ribacke, Dyann F. Wirth, John L. Rinn, Pardis C. Sabeti
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-019-41247-5

A critical regulator of Bcl2 revealed by systematic transcript discovery of lncRNAs associated with T-cell differentiation
Cited by: 8
Author(s): Wiam Saadi, Yasmina Kermezli, Lan T M Dao, Eve-Lyne Mathieu, David Santiago-Algarra, Iris Manosalva, Magali Torres, Mohamed Belhocine, Lydie Pradel, Béatrice Loriod, Mourad Aribi, Denis Puthier, Salvatore Spicuglia
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-017-4339-5

Characteristics of functional enrichment and gene expression level of human putative transcriptional target genes
Cited by: 7
Author(s): Naoki Osato
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pbio.3000245

Simple nutrients bypass the requirement for HLH-30 in coupling lysosomal nutrient sensing to survival
Cited by: 15
Author(s): John T. Murphy, Haiyan Liu, Xiucui Ma, Alexander Shaver, Brian M. Egan, Clara Oh, Alexander Boyko, Travis Mazer, Samuel Ang, Rohan Khopkar, Ali Javaheri, Sandeep Kumar, Xuntian Jiang, Daniel S. Ory, Kartik Mani, Scot J. Matkovich, Kerry Kornfeld, Abhinav Diwan
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-57026-1

Noninvasive rapid detection of metabolic adaptation in activated human T lymphocytes by hyperpolarized 13C magnetic resonance
Cited by: 12
Author(s): Emine Can, Mor Mishkovsky, Hikari A.I. Yoshihara, Nicolas Kunz, Dominique‐Laurent Couturier, Ulf Petrausch, Marie‐Agnès Doucey, Arnaud Comment
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-019-55146-2

An Optimised Protocol Harnessing Laser Capture Microdissection for Transcriptomic Analysis on Matched Primary and Metastatic Colorectal Tumours
Cited by: 7
Author(s): Chin-Ann Johnny Ong, Qiu Xuan Tan, Hui Jun Lim, Nicholas B. Shannon, Weng Khong Lim, Josephine Hendrikson, Wai Har Ng, Joey Wee-Shan Tan, Kelvin K.N. Koh, Seettha D. Wasudevan, Cedric Chuan‐Young Ng, Vikneswari Rajasegaran, Tony Kiat Hon Lim, Choon Kiat Ong, Oi Lian Kon, Bin Tean Teh, Grace Hwei Ching Tan, Claramae Shulyn Chia, Khee Chee Soo, Marissa Teo
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-75243-x

A large deletion on CFA28 omitting ACSL5 gene is associated with intestinal lipid malabsorption in the Australian Kelpie dog breed
Cited by: 4
Author(s): Mitchell O’Brien, Niek Beijerink, Mandy Sansom, Sarah Thornton, Tracy Chew, Claire M. Wade
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-020-75264-6

p39-associated Cdk5 activity regulates dendritic morphogenesis
Cited by: 8
Author(s): Liang Ouyang, Yu Chen, Ye Wang, Amy K.Y. Fu, Wing‐Yu Fu, Nancy Y. Ip
Software Mentions: 2
Published: about 4 years ago

10.3390/nu13010048

[6S]-5-Methyltetrahydrofolic Acid and Folic Acid Pregnancy Diets Differentially Program Metabolic Phenotype and Hypothalamic Gene Expression of Wistar Rat Dams Post-Birth
Cited by: 7
Author(s): Emanuela Pannia, Rola Hammoud, Rebecca Simonian, Erland Arning, Paula Ashcraft, Brandi Wasek, Teodoro Bottiglieri, Zdenka Pausová, Ruslan Kubant, G. Harvey Anderson
Software Mentions: 2
Published: almost 4 years ago

10.3390/ijms20010148

MiR-125b-2 Knockout in Testis Is Associated with Targeting to the PAP Gene, Mitochondrial Copy Number, and Impaired Sperm Quality
Cited by: 6
Author(s): Longlong Li, Yanling Zhu, Ting Chen, Jiajie Sun, Junyi Luo, Gang Shu, Xiaotong Zhu, Qingyan Jiang, Yongliang Zhang, Qianyun Xi
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-021-83932-4

Melanocortin receptor activation alleviates amyloid pathology and glial reactivity in an Alzheimer’s disease transgenic mouse model
Cited by: 10
Author(s): Jackie K Y Lau, Min Tian, Yang Shen, Shun-Fat Lau, Wing‐Yu Fu, Amy Kit Yu Fu, Nancy Y. Ip
Software Mentions: 2
Published: over 3 years ago

10.1186/s13024-018-0289-x

ABI3 and PLCG2 missense variants as risk factors for neurodegenerative diseases in Caucasians and African Americans
Cited by: 71
Author(s): Olivia J. Conway, Minerva M. Carrasquillo, Xue Wang, Jenny M. Bredenberg, Joseph S. Reddy, Samantha L. Strickland, Curtis S. Younkin, Jeremy D. Burgess, Mariet Allen, Sarah Lincoln, Thuy Nguyen, Kimberly G. Malphrus, Alexandra I. Soto, Ronald L. Walton, Bradley F. Boeve, Ronald C. Petersen, John A. Lucas, Tanis J. Ferman, William P. Cheshire, Jay A. van Gerpen, Ryan J. Uitti, Zbigniew K. Wszołek, Owen A. Ross, Dennis W. Dickson, Neill R. Graff‐Radford, Nilüfer Ertekin-Taner
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-021-88703-9

Combined VEGFR and MAPK pathway inhibition in angiosarcoma
Cited by: 13
Author(s): Michael J. Wagner, Yasmin Lyons, Jean H. Siedel, Robert Dood, Archana S. Nagaraja, Monika Haemmerle, Lingegowda S. Mangala, Pritha Chanana, Alexander J. Lazar, Wei Lien Wang, Vinod Ravi, Eric C. Holland, Anil K. Sood
Software Mentions: 2
Published: over 3 years ago

10.7150/thno.51931

Functional roles of antisense enhancer RNA for promoting prostate cancer progression
Cited by: 22
Author(s): Chun-Wu Pan, Simeng Wen, Lei Chen, Yulei Wei, Yuanjie Niu, Yu Zhao
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13229-017-0175-3

Mutations in RAB39B in individuals with intellectual disability, autism spectrum disorder, and macrocephaly
Cited by: 34
Author(s): Marc Woodbury‐Smith, Éric Deneault, Ryan K. C. Yuen, Susan Walker, Mehdi Zarrei, Giovanna Pellecchia, Jennifer Howe, Ny Hoang, Mohammed Uddin, Christian R. Marshall, Christina Chrysler, Ann Thompson, Péter Szatmári, Stephen W. Scherer
Software Mentions: 2
Published: about 7 years ago

10.1186/s12864-018-4503-6

RNA-QC-chain: comprehensive and fast quality control for RNA-Seq data
Cited by: 41
Author(s): Qian Zhou, Xiaoquan Su, Gongchao Jing, Songlin Chen, Kang Ning
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12864-017-3581-1

Variant discovery in the sheep milk transcriptome using RNA sequencing
Cited by: 34
Author(s): Aroa Suárez-Vega, Beatriz Gutiérrez-Gil, Christophe Klopp, Gwenola Tosser‐Klopp, Juan José Arranz
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.ppat.1009335

m6A RNA methylation facilitates pre-mRNA 3’-end formation and is essential for viability of Toxoplasma gondii
Cited by: 10
Author(s): Michael J. Holmes, Leah R. Padgett, Matheus Silva e Bastos, William J. Sullivan
Software Mentions: 1
Published: over 3 years ago

10.1002/pmic.201800315

Integrated Transcriptomic and Proteomic Analysis of Primary Human Umbilical Vein Endothelial Cells
Cited by: 10
Author(s): Anil K. Madugundu, Chan Hyun Na, Raja Sekhar Nirujogi, Santosh Renuse, Kwang Pyo Kim, Kathleen H. Burns, Christopher Wilks, Ben Langmead, Shannon Ellis, Leonardo Collado‐Torres, Marc K. Halushka, Min‐Sik Kim, Anil K. Madugundu
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21030772

Transcriptome Analysis of Drought-Resistant and Drought-Sensitive Sorghum (Sorghum bicolor) Genotypes in Response to PEG-Induced Drought Stress
Cited by: 62
Author(s): Salah E. Abdel‐Ghany, Fahad Ullah, Asa Ben-Hur, Anireddy S. N. Reddy
Software Mentions: 1
Published: almost 5 years ago

10.7150/thno.34801

Macrophages facilitate post myocardial infarction arrhythmias: roles of gap junction and KCa3.1
Cited by: 22
Author(s): Yudong Fei, Qian Wang, Jianwen Hou, Wei Li, Xiaojing Cai, Yujie Yang, Liu-Hui Zhang, Zhixing Wei, Tai-Zhong Chen, Yuepeng Wang, Yi‐Gang Li
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0216050

Robustness of RNA sequencing on older formalin-fixed paraffin-embedded tissue from high-grade ovarian serous adenocarcinomas
Cited by: 24
Author(s): Yongmei Zhao, Monika Mehta, Ashley Walton, Keyur Talsania, Yelena Levin, Jyoti Shetty, Elizabeth M. Gillanders, Bao Tran, Danielle M. Carrick
Software Mentions: 1
Published: over 5 years ago

10.1186/s13040-015-0051-7

Uncovering correlated variability in epigenomic datasets using the Karhunen-Loeve transform
Cited by: 13
Author(s): Pedro Madrigal, Paweł Krajewski
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-018-4983-4

DoGFinder: a software for the discovery and quantification of readthrough transcripts from RNA-seq
Cited by: 16
Author(s): Yuval Wiesel, Niv Sabath, Reut Shalgi
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0190817

Probing the changes in gene expression due to α-crystallin mutations in mouse models of hereditary human cataract
Cited by: 22
Author(s): Usha P. Andley, Eric Tycksen, Brittney N. McGlasson-Naumann, Paul D. Hamilton
Software Mentions: 1
Published: almost 7 years ago

10.1002/cam4.3195

Galangin promotes cell apoptosis through suppression of H19 expression in hepatocellular carcinoma cells
Cited by: 25
Author(s): Xiaowei Zhong, Siyi Huang, Dianfeng Liu, Ziping Jiang, Qinglong Jin, Chengshun Li, Da Liu, Qunyan Yao, Dongxu Wang
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0225901

Abnormal keratinocyte differentiation in the nasal planum of Labrador Retrievers with hereditary nasal parakeratosis (HNPK)
Cited by: 7
Author(s): Jeanette Bannoehr, Pierre Balmer, Michael Hubert Stoffel, Vidhya Jagannathan, Véronique Gaschen, Kathrin Kühni, Beyza Sayar, Michaela Drögemüller, Denise Howald, Dominique J Wiener, Tosso Leeb, Monika Maria Welle, Eliane J. Müller, Petra Roosje
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2020.00472

Comparison of the Transcriptome of the Ovine Mammary Gland in Lactating and Non-lactating Small-Tailed Han Sheep
Cited by: 12
Author(s): Jiqing Wang, Huitong Zhou, Jonathan G. H. Hickford, Zhiyun Hao, Jiyuan Shen, Yuzhu Luo, Jiang Hu, Xiu Liu, Shaobin Li
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0185627

CRISPR-mediated HDAC2 disruption identifies two distinct classes of target genes in human cells
Cited by: 10
Author(s): Priyanka Somanath, Rachel Herndon Klein, Paul S. Knoepfler
Software Mentions: 1
Published: about 7 years ago

10.1038/s42003-021-01698-x

A novel canine reference genome resolves genomic architecture and uncovers transcript complexity
Cited by: 51
Author(s): Chao Wang, Ola Wallerman, Maja L. Arendt, Elisabeth Sundström, Åsa Karlsson, Jessika Nordin, Suvi Mäkeläinen, Gerli Pielberg, Jeanette Hanson, Åsa Ohlsson, Sara Saellström, Henrik Rönnberg, Ingrid Ljungvall, Jens Häggström, Tomas F. Bergström, Åke Hedhammar, Jennifer R. S. Meadows, Kerstin Lindblad‐Toh
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-017-14568-6

Differentially expressed genes in the caecal and colonic mucosa of Landrace finishing pigs with high and low food conversion ratios
Cited by: 14
Author(s): Zhen Tan, Yuan Wang, Ting Yang, Kai Xing, Ai Hong, Shaokang Chen, Fengxia Zhang, Xitong Zhao, Jianfeng Liu, Chuduan Wang
Software Mentions: 1
Published: about 7 years ago

10.1590/1414-431X20187113

Transcriptomic differential lncRNA expression is involved in neuropathic pain in rat dorsal root ganglion after spared sciatic nerve injury
Cited by: 16
Author(s): Peizhong Mao, C.R. Li, S.Z. Zhang, Y. Zhang, B.T. Liu, Bin Fan
Software Mentions: 1
Published: almost 7 years ago

10.1523/ENEURO.0320-18.2018

The Differences in Local Translatome across Distinct Neuron Types Is Mediated by Both Baseline Cellular Differences and Post-transcriptional Mechanisms
Cited by: 13
Author(s): Rebecca Ouwenga, Allison M. Lake, Shivani Aryal, Tomás Lagunas, Joseph D. Dougherty
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-31032-1

An integrative piRNA analysis of mouse gametes and zygotes reveals new potential origins and gene regulatory roles
Cited by: 19
Author(s): Eduardo Larriba, Jesús del Mazo
Software Mentions: 1
Published: about 6 years ago

10.1042/BSR20180958

Indirubin attenuates mouse psoriasis-like skin lesion in a CD274-dependent manner: an achievement of RNA sequencing
Cited by: 11
Author(s): Xiaochun Xue, Jinhua Wu, Junhui Li, Jianguo Xu, Haiying Dai, Congshan Tao, Chao Li, HU Jin-hong
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41408-019-0233-5

Amplification of 9p24.1 in diffuse large B-cell lymphoma identifies a unique subset of cases that resemble primary mediastinal large B-cell lymphoma
Cited by: 34
Author(s): Yucai Wang, Kerstin Wenzl, Michelle K. Manske, Yan W. Asmann, Vivekananda Sarangi, Patricia T. Greipp, Jordan E. Krull, Keenan T. Hartert, Rong He, Andrew L. Feldman, Matthew J. Maurer, Susan L. Slager, Grzegorz S. Nowakowski, Thomas M. Habermann, Thomas E. Witzig, Brian K. Link, Stephen M. Ansell, James R. Cerhan, Anne J. Novak
Software Mentions: 1
Published: about 5 years ago

10.18632/oncotarget.27564

Radiation induces iatrogenic immunosuppression by indirectly affecting hematopoiesis in bone marrow
Cited by: 4
Author(s): Vaishali Kapoor, Andrea Collins, Kaylan Griffith, Subhajit Ghosh, Nathan Wong, Xiaowei Wang, Grant A. Challen, Joseph R. Krambs, Dan Link, Dennis E. Hallahan, Dinesh Thotala
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pgen.1004993

A Genome-Wide Hybrid Incompatibility Landscape between Caenorhabditis briggsae and C. nigoni
Cited by: 41
Author(s): Yu Bi, Xiaoliang Ren, Cheung Yan, Jiaofang Shao, Dongying Xie, Zhongying Zhao
Software Mentions: 1
Published: almost 10 years ago

10.3390/insects12070593

Characterization of Anopheles stephensi Odorant Receptor 8, an Abundant Component of the Mouthpart Chemosensory Transcriptome
Cited by: 3
Author(s): Zachary Speth, Gurlaz Kaur, Devin Mazolewski, Rayden Sisomphou, Danielle Denise C Siao, Rana Pooraiiouby, Hans Vasquez-Gross, Juli Petereit, Monika Gulia-Nuss, Dennis Mathew, Andrew B. Nuss
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pcbi.1004868

AuPairWise: A Method to Estimate RNA-Seq Replicability through Co-expression
Cited by: 9
Author(s): Sara Ballouz, Jesse Gillis
Software Mentions: 1
Published: over 8 years ago

10.18632/aging.202169

EPHA5 mutations predict survival after immunotherapy in lung adenocarcinoma
Cited by: 9
Author(s): Zhiming Chen, Ji Chen, Dianxu Ren, Jiao Zhang, Ying Yang, Henghui Zhang, Beibei Mao, Haitao Ma
Software Mentions: 1
Published: almost 4 years ago

10.1186/s13045-015-0211-8

The Hedgehog pathway as targetable vulnerability with 5-azacytidine in myelodysplastic syndrome and acute myeloid leukemia
Cited by: 46
Author(s): Raoul Tibes, Aref Al‐Kali, Gavin R. Oliver, Devora Delman, Nanna Hansen, Keerthi Bhagavatula, J. Mohan, Fariborz Rakhshan, Thomas G. Wood, James M. Foran, Ruben A. Mesa, James M Bogenberger
Software Mentions: 1
Published: about 9 years ago

10.1042/BSR20210455

Comprehensive phylogeny of Konosirus punctatus (Clupeiformes: Clupeidae) based on transcriptomic data
Cited by: 2
Author(s): Fangrui Lou, Qiu Shengyao, Yongzheng Tang, Zhiyang Wang, Lei Wang
Software Mentions: 1
Published: over 3 years ago

10.1002/pld3.245

Jasmonate induced alternative splicing responses in Arabidopsis
Cited by: 8
Author(s): Guanying Feng, Mi‐Jeong Yoo, R. John Davenport, J. Lucas Boatwright, Jin Koh, Sixue Chen, W. Brad Barbazuk
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-67614-1

Comparative transcriptome analysis of a taxol-producing endophytic fungus, Aspergillus aculeatinus Tax-6, and its mutant strain
Cited by: 15
Author(s): Weichuan Qiao, Tianqi Tang, Fei Ling
Software Mentions: 1
Published: over 4 years ago

10.1111/pbi.12737

Silencing of Sl<scp>PL</scp>, which encodes a pectate lyase in tomato, confers enhanced fruit firmness, prolonged shelf‐life and reduced susceptibility to grey mould
Cited by: 133
Author(s): Yuan Lü, Wei Huang, Fei Xiong, Zhiqiang Xian, Deding Su, Maozhi Ren, Zhengguo Li
Software Mentions: 1
Published: over 7 years ago

10.12688/wellcomeopenres.15875.2

Transcriptomic analysis reveals diverse gene expression changes in airway macrophages during experimental allergic airway disease
Cited by: 3
Author(s): William J. Branchett, Anne O’Garra, Clare M. Lloyd
Software Mentions: 1
Published: over 4 years ago

10.3389/fonc.2021.651648

Cucurbitacin B Inhibits Cell Proliferation by Regulating X-Inactive Specific Transcript Expression in Tongue Cancer
Cited by: 11
Author(s): Bo-Qiang Tao, Dongxu Wang, Shuo Yang, Yingkun Liu, Han Wu, Zhanjun Li, Lu Chang, Zhijing Yang, Weiwei Liu
Software Mentions: 1
Published: over 3 years ago

10.1186/s13068-016-0558-2

RNAseq reveals hydrophobins that are involved in the adaptation of Aspergillus nidulans to lignocellulose
Cited by: 27
Author(s): Neil Andrew Brown, Laure Nicolas Annick Ries, Thaila Fernanda dos Reis, Ranjith Rajendran, Renato Augusto Corrêa dos Santos, Gordon Ramage, Diego Mauricio Riaño-Pachón, Gustavo H. Goldman
Software Mentions: 1
Published: over 8 years ago

10.3389/fphar.2020.584960

Bruceine D inhibits Cell Proliferation Through Downregulating LINC01667/MicroRNA-138-5p/Cyclin E1 Axis in Gastric Cancer
Cited by: 13
Author(s): Lin Li, Zhen Dong, Pengfei Shi, Li Tan, Jie Xu, Pan Huang, Zhongze Wang, Hongjuan Cui, Liqun Yang
Software Mentions: 1
Published: almost 4 years ago

10.1093/bioinformatics/btv566

Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
Cited by: 1,080
Author(s): Konstantin Okonechnikov, Ana Conesa, Fernando García-Alcalde
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-015-2156-2

A comprehensive joint analysis of the long and short RNA transcriptomes of human erythrocytes
Cited by: 86
Author(s): Jennifer F. Doss, David L. Corcoran, Dereje D. Jima, Marilyn J. Telen, Sandeep S. Davé, Jen‐Tsan Chi
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms21030848

Transcriptome Analysis of Rice Roots in Response to Root-Knot Nematode Infection
Cited by: 17
Author(s): Yuan Zhou, Di Zhao, Shuang Li, Dongxue Xiao, Yue Xuan, Yuxi Duan, Lijie Chen, Yuanyuan Wang, Xiaoyu Liu, Haiyan Fan, Xiaofeng Zhu
Software Mentions: 1
Published: almost 5 years ago

10.3389/fphys.2018.01067

Midgut Transcriptional Variation of Chilo suppressalis Larvae Induced by Feeding on the Dead-End Trap Plant, Vetiveria zizanioides
Cited by: 4
Author(s): Yanhui Lu, Yanyan Zhao, Li Han, Qi Bai, Yajun Yang, Xiaodong Zheng, Zhongxian Lü
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2018.00080

RNA-Seq Analysis of IL-1B and IL-36 Responses in Epidermal Keratinocytes Identifies a Shared MyD88-Dependent Gene Signature
Cited by: 70
Author(s): William R. Swindell, Maria A. Beamer, Mrinal K. Sarkar, Shannon Loftus, Joseph Fullmer, Xianying Xing, Nicole L. Ward, Lam C. Tsoi, M. Kahlenberg, Yun Liang, Jóhann E. Guðjónsson
Software Mentions: 1
Published: almost 7 years ago

10.1186/1755-8794-7-49

Global transcriptome-wide analysis of CIK cells identify distinct roles of IL-2 and IL-15 in acquisition of cytotoxic capacity against tumor
Cited by: 27
Author(s): Wenju Wang, Mingyao Meng, Yayong Zhang, Chu Wei, Youhua Xie, Lihong Jiang, Chunhui Wang, Fang Yang, Weiwei Tang, Xingfang Jin, Chen Dai, Jie Zong, Zongliu Hou, Ruhong Li
Software Mentions: 1
Published: over 10 years ago

Projects: pypi: RSeQC

Papers Mentioning RSeQC 366