Projects: pypi: PyMOL
https://packages.ecosyste.ms/registries/pypi.org/packages/PyMOL
1 version
Latest release: almost 3 years ago
5 dependent packages
Science Score: 90/100
Starting Score: 100 points
Bonuses:
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem
Very Likely Science (90)
Papers Mentioning PyMOL 8,266
10.3390/molecules25092025
Identification of Transient Receptor Potential Vanilloid 3 Antagonists from Achillea alpina L. and Separation by Liquid-Liquid-Refining Extraction and High-Speed Counter-Current ChromatographyCited by: 8
Author(s): Shiwei Sun, Rongrong Wang, Xinghuai Sun, Jiahe Fan, Hang Qi, Yang Liu, Guo-Qing Qin, Wei Wang
Software Mentions: 1
Published: about 6 years ago
10.3390/molecules24081476
In Silico Evaluation of Ibuprofen and Two Benzoylpropionic Acid Derivatives with Potential Anti-Inflammatory ActivityCited by: 21
Author(s): José Adolfo Homobono Machado Bittencourt, Moysés F. A. Neto, Pedro Sousa Lacerda, Renata C. V. S. Bittencourt, Raí C. Silva, Cleison C. Lobato, Luciane B. Silva, Franco Henrique Andrade Leite, Juliana Pavan Zuliani, Joaquín M C Rosa, Rosivaldo S. Borges, Cleydson Breno Rodrigues dos Santos
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules24122229
A Novel Cold-Adapted and Salt-Tolerant RNase R from Antarctic Sea-Ice Bacterium Psychrobacter sp. ANT206Cited by: 12
Author(s): Yatong Wang, Yanhua Hou, Ping Nie, Yifan Wang, Xiulian Ren, Qifeng Wei, Quanfu Wang
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules24101945
Design of a Human Rhinovirus-14 3C Protease-Inducible Caspase-3Cited by: 4
Author(s): Hanna J. Wagner, Wilfried Weber
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules24050881
APE-Gen: A Fast Method for Generating Ensembles of Bound Peptide-MHC ConformationsCited by: 28
Author(s): Jayvee R. Abella, Dinler Amaral Antunes, Cecilia Clementi, Lydia E. Kavraki
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules26071943
Aha1 Exhibits Distinctive Dynamics Behavior and Chaperone-Like ActivityCited by: 6
Author(s): Huifang Hu, Qing Wang, Jingwen Du, Zhijun Liu, Yiluan Ding, Hongjuan Xue, Chen Zhou, Linyin Feng, Naixia Zhang
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules22081312
The Role of Solvent-Accessible Leu-208 of Cold-Active Pseudomonas fluorescens Strain AMS8 Lipase in Interfacial Activation, Substrate Accessibility and Low-Molecular Weight Esterification in the Presence of TolueneCited by: 28
Author(s): Norhayati Yaacob, Nor Ahmad Kamarudin, Adam Thean Chor Leow, Abu Bakar Salleh, Raja Raja Abd Rahman, Mohd Mohamad Ali
Software Mentions: 1
Published: almost 9 years ago
10.3390/molecules26030691
Molecular Modelling Studies on Pyrazole Derivatives for the Design of Potent Rearranged during Transfection Kinase InhibitorsCited by: 5
Author(s): Swapnil P. Bhujbal, Seketoulie Keretsu, Seung Joo Cho
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules22122098
Comparison of the Binding of Reversible Inhibitors to Human Butyrylcholinesterase and Acetylcholinesterase: A Crystallographic, Kinetic and Calorimetric StudyCited by: 162
Author(s): Terrone L. Rosenberry, Xavier Brazzolotto, Ian R. Macdonald, M. Wandhammer, M. Trovaslet-Leroy, Sultan Darvesh, Florian Nachon
Software Mentions: 1
Published: over 8 years ago
10.3390/molecules26154540
Molecular Dynamics Simulations in Designing DARPins as Phosphorylation-Specific Protein Binders of ERK2Cited by: 0
Author(s): Vertika Gautam, Piyarat Nimmanpipug, Sharifuddin M. Zain, Noorsaadah Abd. Rahman, Vannajan Sanghiran Lee
Software Mentions: 1
Published: almost 5 years ago
10.3390/molecules24040682
Synthesis, Characterization, and Biological Activity of a Novel Series of Benzo[4,5]imidazo[2,1-b]thiazole Derivatives as Potential Epidermal Growth Factor Receptor InhibitorsCited by: 19
Author(s): Xin Deng, Xiaoyu Tan, Tiantian An, Qingqing Ma, Zhe Jin, Ce Wang, Qingguo Meng, Chun Hu
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules26103054
Identification of the Active Principle Conferring Anti-Inflammatory and Antinociceptive Properties in Bamboo PlantCited by: 0
Author(s): Bruna Araújo de Sousa, Osmar N. Silva, William F. Porto, T. L. Rocha, Luciano Silva, Ana Paula Ferreira Leal, Danieli Fernanda Buccini, James Oluwagbamigbe Fajemiroye, Ruy de Araújo Caldas, Octávio L. Franco, Maria Fátima Grossi-de-Sá, César de la Fuente-Núñez, Susana Elisa Moreno
Software Mentions: 1
Published: about 5 years ago
10.3390/molecules26010185
Anticancer Activity of Lesbicoumestan in Jurkat Cells via Inhibition of Oxidative Stress-Mediated Apoptosis and MALT1 ProteaseCited by: 5
Author(s): Jooeun Lee, Bo Fang, Nguyễn Thị Thanh Thủy, Jaewoo Hong, Ji Shin Lee, Namki Cho, Hee Min Yoo
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules19021672
Docking Studies in Target Proteins Involved in Antibacterial Action Mechanisms: Extending the Knowledge on Standard Antibiotics to Antimicrobial Mushroom CompoundsCited by: 35
Author(s): Maria José Alves, Hugo J.C. Froufe, Ana F T Costa, Anabela F Santos, Liliana G Oliveira, Sara R M Osório, Rui M.V. Abreu, Manuela Pintado, Isabel C.F.R. Ferreira
Software Mentions: 1
Published: over 12 years ago
10.3390/molecules23123281
Purification and Functional Characterization of the C-Terminal Domain of the β-Actin-Binding Protein AIM1 In VitroCited by: 1
Author(s): Fang Wu, Liangkai Cheng, Yu Qi, Lin Zhang, Hong Li, Caiyan Wang
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules25030627
TLR4-Targeting Therapeutics: Structural Basis and Computer-Aided Drug Discovery ApproachesCited by: 53
Author(s): Qurat Ul Ain, Maria Batool, Sangdun Choi
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules24152786
Inhibiting Acetylcholinesterase to Activate Pleiotropic Prodrugs with Therapeutic Interest in Alzheimer’s DiseaseCited by: 17
Author(s): François-Xavier Toublet, Cédric Lecoutey, Julien Lalut, Bérénice Hatat, Audrey Davis, Marc Since, Sophie Corvaisier, Thomas Freret, Jana Sopkova de Oliveira Santos, Sylvie Claeysen, Michel Boulouard, Patrick Dallemagne, Christophe Rochais
Software Mentions: 1
Published: almost 7 years ago
10.3390/molecules26144321
Doxycycline Interferes with Zika Virus Serine Protease and Inhibits Virus Replication in Human Skin FibroblastsCited by: 4
Author(s): Teow Chong Teoh, Sawsam J. Al-Harbi, Ammar Y. Abdulrahman, Hussin A. Rothan
Software Mentions: 1
Published: almost 5 years ago
10.3390/molecules25153425
Effect of Distance from Catalytic Synergy Group to Iron Porphyrin Center on Activity of G-Quadruplex/Hemin DNAzymeCited by: 5
Author(s): Dehui Qiu, Jingang Mo, Yuan Liu, Jiangyan Zhang, Yongqiang Cheng, Xiaobo Zhang
Software Mentions: 1
Published: almost 6 years ago
10.3390/molecules24183215
Molecular Dynamics Gives New Insights into the Glucose Tolerance and Inhibition Mechanisms on β-GlucosidasesCited by: 16
Author(s): Leon S. C. Costa, Diego Mariano, Rafael E. O. Rocha, Johannes Kraml, Carlos Henrique da Silveira, Klaus R. Liedl, Raquel Cardoso de Melo‐Minardi, Leonardo Henrique França de Lima
Software Mentions: 1
Published: almost 7 years ago
10.3390/molecules19067057
Mesoporous Silicas with Tunable Morphology for the Immobilization of LaccaseCited by: 46
Author(s): Victoria Gascón, Isabel Dı́az, Carlos Márquez‐Álvarez, Rosa M. Blanco
Software Mentions: 1
Published: about 12 years ago
10.3390/molecules25235580
Anti-Allergic Potential of Cinnamaldehyde via the Inhibitory Effect of Histidine Decarboxylase (HDC) Producing Klebsiella pneumoniaCited by: 10
Author(s): Lorina Ineta Badger-Emeka, Promise Madu Emeka, Krishnaraj Thirugnanasambantham, Hairul-Islam Mohamed Ibrahim
Software Mentions: 1
Published: over 5 years ago
10.3390/v12030333
Preparation, Characterization and Diagnostic Valuation of Two Novel Anti-HPV16 E7 Oncoprotein Monoclonal AntibodiesCited by: 3
Author(s): Renjian Hu, Zhen Dong, Kui Zhang, Guoqing Pan, Chongyang Li, Hongjuan Cui
Software Mentions: 1
Published: over 6 years ago
10.3390/v12030276
Influenza A Virus Antibodies with Antibody-Dependent Cellular Cytotoxicity FunctionCited by: 19
Author(s): Rongyuan Gao, Zizhang Sheng, Chithra Sreenivasan, Dan Dan Wang, Liang Feng
Software Mentions: 1
Published: over 6 years ago
10.3390/v12050502
Molecular Evolution and Structural Mapping of N-Terminal Domain in Spike Gene of Middle East Respiratory Syndrome Coronavirus (MERS-CoV)Cited by: 4
Author(s): Asif Naeem, Maaweya E. Hamed, Majed F. Alghoribi, Waleed Aljabr, Hadel Alsaran, Mushira Enani, Bandar Alosaimi
Software Mentions: 1
Published: about 6 years ago
10.3390/v12050518
Influenza Virus Like Particles (VLPs): Opportunities for H7N9 Vaccine DevelopmentCited by: 23
Author(s): Peter Pushko, Irina Tretyakova
Software Mentions: 1
Published: about 6 years ago
10.3390/v12060687
Live Visualization of Hemagglutinin Dynamics during Infection by Using a Novel Reporter Influenza A VirusCited by: 2
Author(s): Luiz Gustavo dos Anjos Borges, Giuseppe Pisanelli, Oyahida Khatun, Adolfo Garcı́a-Sastre, Shashank Tripathi
Software Mentions: 1
Published: about 6 years ago
10.3390/v12070698
Distinct New York City Aedes albopictus Mosquito Populations Display Differences in Salivary Gland Protein D7 Diversity and Chikungunya Virus ReplicationCited by: 10
Author(s): Maria E. Kaczmarek, Nora L. Herzog, María G. Noval, John Zuzworsky, Zahir Shah, Waheed I. Bajwa, Kenneth A. Stapleford
Software Mentions: 1
Published: about 6 years ago
10.3390/v12070693
Viral Membrane Fusion and the Transmembrane DomainCited by: 31
Author(s): Chelsea T. Barrett, Rebecca Ellis Dutch
Software Mentions: 1
Published: about 6 years ago
10.3390/v12091053
Structural Biology of Influenza Hemagglutinin: An Amaranthine AdventureCited by: 34
Author(s): Nicholas C. Wu, Ian A. Wilson
Software Mentions: 1
Published: almost 6 years ago
10.3390/v12090989
Bile Facilitates Human Norovirus Interactions with Diverse Histoblood Group Antigens, Compensating for Capsid Microvariation Observed in 2016–2017 GII.2 StrainsCited by: 8
Author(s): Michael L. Mallory, Lisa C. Lindesmith, Paul D. Brewer-Jensen, Rachel L. Graham, Ralph S. Baric
Software Mentions: 1
Published: almost 6 years ago
10.3390/v12101102
Treatment with Exogenous Trypsin Expands In Vitro Cellular Tropism of the Avian Coronavirus Infectious Bronchitis VirusCited by: 4
Author(s): Phoebe Stevenson-Leggett, Sarah Keep, Erica Bickerton
Software Mentions: 1
Published: almost 6 years ago
10.3390/v12111225
A Highly Conserved Epitope (RNNQIPQDF) of Porcine teschovirus Induced a Group-Specific Antiserum: A Bioinformatics-Predicted Model with Pan-PTV PotentialCited by: 5
Author(s): Tung-Hsuan Tsai, Chia‐Yi Chang, Fun-In Wang
Software Mentions: 1
Published: over 5 years ago
10.3390/v12111316
Wine Phenolic Compounds Differently Affect the Host-Killing Activity of Two Lytic Bacteriophages Infecting the Lactic Acid Bacterium Oenococcus oeniCited by: 8
Author(s): Cécile Philippe, Amel Chaïb, Féty Jaomanjaka, Stéphanie Cluzet, Alain E. Lagarde, Patricia Ballestra, Alain Décendit, Mélina Petrel, Olivier Claisse, Adeline Goulet, Christian Cambillau, Claire Le Marrec
Software Mentions: 1
Published: over 5 years ago
10.3390/v12121361
The Lipid Transfer Protein 1 from Nicotiana benthamiana Assists Bamboo mosaic virus AccumulationCited by: 10
Author(s): Ling‐Ying Chiu, I‐Hsuan Chen, Yau‐Heiu Hsu, Ching‐Hsiu Tsai
Software Mentions: 1
Published: over 5 years ago
10.3390/v13010033
The Polarity of an Amino Acid at Position 1891 of Severe Fever with Thrombocytopenia Syndrome Virus L Protein Is Critical for the Polymerase ActivityCited by: 5
Author(s): Kisho Noda, Yuichi Tsuda, Fumiya Kozawa, Manabu Igarashi, Kenta Shimizu, Jiro Arikawa, Kumiko Yoshimatsu
Software Mentions: 1
Published: over 5 years ago
10.3390/v13010095
Whole-Genome Analyses Identifies Multiple Reassortant Rotavirus Strains in Rwanda Post-Vaccine IntroductionCited by: 8
Author(s): Sebotsana Rasebotsa, Jeannine Uwimana, Milton T. Mogotsi, Kebareng G. Rakau, Nonkululeko B. Magagula, Mapaseka L Seheri, Jason M. Mwenda, M. Jeffrey Mphahlele, Saheed Sabiu, Richard Mihigo, Léon Mutesa, Martin M. Nyaga
Software Mentions: 1
Published: over 5 years ago
10.3390/v13010136
Structural Mapping of Mutations in Spike, RdRp and Orf3a Genes of SARS-CoV-2 in Influenza Like Illness (ILI) PatientsCited by: 4
Author(s): Bandar Alosaimi, Asif Naeem, Majed F. Alghoribi, Liliane Okdah, Maaweya E. Hamed, Ahmad S. AlYami, Athari Alotaibi, Mushira Enani
Software Mentions: 1
Published: over 5 years ago
10.3390/v13020159
Solution NMR Determination of the CDHR3 Rhinovirus-C Binding Domain, EC1Cited by: 1
Author(s): Woonghee Lee, Ronnie O. Frederick, Marco Tonelli, Ann C. Palmenberg
Software Mentions: 1
Published: over 5 years ago
10.3390/v13020174
Crystal Structure of SARS-CoV-2 Main Protease in Complex with the Non-Covalent Inhibitor ML188Cited by: 70
Author(s): G.J. Lockbaum, Archie C. Reyes, Jeong Min Lee, Ronak Tilvawala, E.A. Nalivaika, Akbar Ali, Neşe Kurt Yilmaz, Paul R. Thompson, Celia A. Schiffer
Software Mentions: 1
Published: over 5 years ago
10.3390/v13020220
Development of Monoclonal Antibodies for Detection of Conserved and Variable Epitopes of Large Protein of Rabies VirusCited by: 6
Author(s): Wen Zhao, Jingyin Su, Naiyu Zhao, Jie Liu, Shuo Su
Software Mentions: 1
Published: over 5 years ago
10.3390/v13020333
Rational Design of a Pan-Coronavirus Vaccine Based on Conserved CTL EpitopesCited by: 13
Author(s): Minchao Li, Jinfeng Zeng, Ruiting Li, Zhiping Wen, Yanhui Cai, Jeffrey J. Wallin, Yuelong Shu, Xiangjun Du, Caijun Sun
Software Mentions: 1
Published: over 5 years ago
10.3390/v13030376
Human Astroviruses: A Tale of Two StrainsCited by: 7
Author(s): Virginia Hargest, Amy Davis, Shaoyuan Tan, Valerie Cortez, Stacey Schultz‐Cherry
Software Mentions: 1
Published: over 5 years ago
10.3390/v13030479
Design, Synthesis and Characterization of HIV-1 CA-Targeting Small Molecules: Conformational Restriction of PF74Cited by: 10
Author(s): Rajkumar Lalji Sahani, Raquel Diana-Rivero, Sanjeev Kumar V. Vernekar, Lei Wang, Haijuan Du, Huanchun Zhang, Andres Emanuelli Castaner, Mary C. Casey, Karen A. Kirby, Philip R. Tedbury, Jiashu Xie, Stefan G. Sarafianos, Zhengqiang Wang
Software Mentions: 1
Published: over 5 years ago
10.3390/v13050718
Coxsackievirus B3—Its Potential as an Oncolytic VirusCited by: 15
Author(s): Anja Geisler, Ahmet Hazini, Lisanne Heimann, Jens Kurreck, Henry Fechner
Software Mentions: 1
Published: about 5 years ago
10.3390/v13050800
Structural Insight into Non-Enveloped Virus Binding to Glycosaminoglycan Receptors: A ReviewCited by: 8
Author(s): Marie Sorin, Jasmin Kuhn, Aleksandra Cecylia Stasiak, Thilo Stehle
Software Mentions: 1
Published: about 5 years ago
10.3390/v13050770
Discovery of New Small Molecule Hits as Hepatitis B Virus Capsid Assembly Modulators: Structure and Pharmacophore-Based ApproachesCited by: 14
Author(s): Sameera Senaweera, Haijuan Du, Huanchun Zhang, Karen A. Kirby, Philip R. Tedbury, Jiashu Xie, Stefan G. Sarafianos, Zhengqiang Wang
Software Mentions: 1
Published: about 5 years ago
10.3390/v13050760
Atypical Porcine Pestiviruses: Relationships and Conserved Structural FeaturesCited by: 3
Author(s): Christiane Riedel, H. Aitkenhead, Kamel El Omari, Till Rümenapf
Software Mentions: 1
Published: about 5 years ago
10.3390/v13050837
Structure-Based and Rational Design of a Hepatitis C Virus VaccineCited by: 6
Author(s): Johnathan D. Guest, Brian G. Pierce
Software Mentions: 1
Published: about 5 years ago
10.3390/v13050875
Viruses with U-DNA: New Avenues for BiotechnologyCited by: 2
Author(s): Krisztina Nagy, Mikael Skurnik, Beáta G. Vértessy
Software Mentions: 1
Published: about 5 years ago
10.3390/v13050883
Mutation in a SARS-CoV-2 Haplotype from Sub-Antarctic Chile Reveals New Insights into the Spike’s DynamicsCited by: 9
Author(s): Jorge González-Puelma, Jacqueline Aldridge, Marco Montes de, Mónica Pinto, Roberto Uribe-Paredes, José Fernández-Goycoolea, Diego Álvarez-Saravia, Hermy Álvarez, Gonzalo Encina, Thomas Weitzel, Rodrigo Muñóz, Álvaro Olivera-Nappa, Sergio Pantano, Marcelo A. Navarrete
Software Mentions: 1
Published: about 5 years ago
10.3390/v13061115
The SARS-CoV-2 Nucleocapsid Protein and Its Role in Viral Structure, Biological Functions, and a Potential Target for Drug or Vaccine MitigationCited by: 142
Author(s): Zhihua Bai, Ying Cao, Wenjun Liu, Jing Li
Software Mentions: 1
Published: about 5 years ago
10.3390/v13061084
Examination of the APOBEC3 Barrier to Cross Species Transmission of Primate LentivirusesCited by: 12
Author(s): Amit Gaba, Ben Flath, Linda Chelico
Software Mentions: 1
Published: about 5 years ago
10.3390/v13060987
A Novel Broad Host Range Phage Infecting AlteromonasCited by: 7
Author(s): Xuejin Feng, Wei Yan, Anan Wang, Ruijie Ma, Xiaowei Chen, Ta-Hui Lin, Yi‐Lung Chen, Shuzhen Wei, Tao Jin, Nianzhi Jiao, Rui Zhang
Software Mentions: 1
Published: about 5 years ago
10.3390/v13061034
Genomic Analysis of a Novel Phage Infecting the Turkey Pathogen Escherichia coli APEC O78 and Its Endolysin ActivityCited by: 5
Author(s): Sangsang Deng, Qiang Xu, Yajuan Fu, Liping Liang, Yan Wu, Fang Peng, Meiying Gao
Software Mentions: 1
Published: about 5 years ago
10.3390/v13071336
Adeno-Associated Virus (AAV) Gene Delivery: Dissecting Molecular Interactions upon Cell EntryCited by: 23
Author(s): Edward Large, Mark Silveria, Grant M. Zane, Onellah Weerakoon, Michael S. Chapman
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13071407
The Molecular Evolution of Type 2 Vaccine-Derived Polioviruses in Individuals with Primary Immunodeficiency DiseasesCited by: 9
Author(s): Koichi Kitamura, Hiroyuki Shimizu
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13081615
What Binds Cationic Photosensitizers Better: Brownian Dynamics Reveals Key Interaction Sites on Spike Proteins of SARS-CoV, MERS-CoV, and SARS-CoV-2Cited by: 6
Author(s): Vladimir A. Fedorov, Ekaterina G. Kholina, Sergei Khruschev, I. B. Kovalenko, A. B. Rubin, M. G. Strakhovskaya
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13081655
Identification of a Common Conformational Epitope on the Glycoprotein E2 of Classical Swine Fever Virus and Border Disease VirusCited by: 8
Author(s): Yanyun Huang, Denise Meyer, Alexander Postel, Fun-In Wang, Hsin-Meng Liu, Chia-Huei Yang, Yu‐Chun Huang, Nicholas Berkley, Ming-Chung Deng, Fun-In Wang, Paul Becher, Helen Crooke, Chia‐Yi Chang
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13081464
Evidence of Adaptive Evolution in Wolbachia-Regulated Gene DNMT2 and Its Role in the Dipteran Immune Response and Pathogen BlockingCited by: 5
Author(s): Tamanash Bhattacharya, Danny W. Rice, John M. Crawford, Richard W. Hardy, Irene L. G. Newton
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13081669
All-Trans Retinoic Acid Exhibits Antiviral Effect against SARS-CoV-2 by Inhibiting 3CLpro ActivityCited by: 15
Author(s): Takeshi Morita, Kei Miyakawa, Sundararaj Stanleyraj Jeremiah, Yutaro Yamaoka, Mitsuru Sada, Tomoko Kuniyoshi, Jinwei Yang, Hirokazu Kimura, Akihide Ryo
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13091852
A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In VivoCited by: 4
Author(s): Jana Van Dycke, Wenhao Dai, Zoe Stylianidou, Jian Li, Arno Cuvry, Emma Roux, Bingqian Li, Jasper Rymenants, Lindsey Bervoets, Peter de Witte, Hong Liu, Johan Neyts, Joana Rocha‐Pereira
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13091872
Whole Genome Analysis of Human Rotaviruses Reveals Single Gene Reassortant Rotavirus Strains in ZambiaCited by: 11
Author(s): Wairimu M. Maringa, Julia Simwaka, Peter N. Mwangi, Evans Mpabalwani, Jason M. Mwenda, M. Jeffrey Mphahlele, Mapaseka L Seheri, Martin M. Nyaga
Software Mentions: 1
Published: almost 5 years ago
10.3390/v13091825
Hypericin Inhibit Alpha-Coronavirus Replication by Targeting 3CL ProteaseCited by: 9
Author(s): Yue Zhang, Huijie Chen, Mengmeng Zou, Rick Oerlemans, Changhao Shao, Yudong Ren, Ruili Zhang, Xiaodan Huang, Guangxing Li, Yirui Cong
Software Mentions: 1
Published: almost 5 years ago
10.1186/s42492-018-0007-0
Frontiers in biomolecular mesh generation and molecular visualization systemsCited by: 5
Author(s): Sheng Gui, Dawar Khan, Qin Wang, Dong‐Ming Yan, Benzhuo Lu
Software Mentions: 1
Published: almost 8 years ago
10.12688/wellcomeopenres.12631.1
Rare variants of the 3’-5’ DNA exonuclease TREX1 in early onset small vessel strokeCited by: 6
Author(s): Sarah McGlasson, Kristiina Rannikmäe, Steve Bevan, Clare V. Logan, Louise S. Bicknell, Alexa Jury, Andrew P. Jackson, Hugh S. Markus, Cathie Sudlow, David Hunt
Software Mentions: 1
Published: over 8 years ago
10.12688/wellcomeopenres.15368.2
The lipid transfer protein Saposin B does not directly bind CD1d for lipid antigen loadingCited by: 4
Author(s): Maria Shamin, Tomasz H. Benedyk, Stephen C. Graham, Janet E. Deane
Software Mentions: 1
Published: over 6 years ago
10.12688/wellcomeopenres.15893.2
Partial catalytic Cys oxidation of human GAPDH to Cys-sulfonic acid.Cited by: 3
Author(s): Andrea Lia, Adam Dowle, C. E. D. Taylor, Angelo Santino, Pietro Roversi
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13071-019-3341-y
Prediction of Toxoplasma gondii virulence factor ROP18 competitive inhibitors by virtual screeningCited by: 4
Author(s): Kun Yin, Guihua Zhao, Chun‐Fang Xu, Qing Xiao, Biwei Wen, Hongmei Sun, Gongzhen Liu, Ye Liu, Qingsong Zhao, Quan Wei, Baoyu Huang, Yan Gao, Jianping Cao
Software Mentions: 1
Published: over 7 years ago
10.1186/s13071-020-04342-5
Anopheles metabolic proteins in malaria transmission, prevention and control: a reviewCited by: 15
Author(s): Eunice Adedeji, Olubanke Olujoke Ogunlana, Segun Fatumo, Thomas Beder, Yvonne Ukamaka Ajamma, Rainer Koenig, Ezekiel Adebiyi
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13071-020-04019-z
Insights about the structure of farnesyl diphosphate synthase (FPPS) and the activity of bisphosphonates on the proliferation and ultrastructure of Leishmania and GiardiaCited by: 11
Author(s): Ana Paula Rocha Gadelha, Claudia Maia Brigagao, Martha Barros da Silva, Aline Beatriz Mello Rodrigues, Ana Carolina Ramos Guimarães, Fernando Paiva, Wanderley de Souza, Cristina Henriques
Software Mentions: 1
Published: over 6 years ago
10.1186/s13071-018-2703-1
A novel progesterone receptor membrane component (PGRMC) in the human and swine parasite Taenia solium: implications to the host-parasite relationshipCited by: 10
Author(s): Hugo Aguilar-Díaz, Karen Elizabeth Nava-Castro, Galileo Escobedo, Lenin Domínguez-Ramírez, Martìn García-Varela, Víctor Hugo Del Río-Araiza, Margarita Isabel Palacios-Arreola, Jorge Morales‐Montor
Software Mentions: 1
Published: over 8 years ago
10.1186/s13071-015-1006-z
ANISERP: a new serpin from the parasite Anisakis simplexCited by: 9
Author(s): Elizabeth Valdivieso, María Jesús Perteguer, Carolina Hurtado, Pamela Campioli, Esperanza Rodríguez, Ana Saborido, Victoria Martínez-Sernández, Paulino Gómez‐Puertas, Florencio M. Ubeira, Teresa Gárate
Software Mentions: 1
Published: almost 11 years ago
10.1186/s13071-016-1391-y
Unique PFK regulatory property from some mosquito vectors of disease, and from Drosophila melanogasterCited by: 11
Author(s): Rodrigo Dutra Nunes, Nelilma C. Romeiro, Hugo Tremonte de Carvalho, Jean Ribeiro Moreira, Mauro Sola‐Penna, Mário A.C. Silva-Neto, Glória R.C. Braz
Software Mentions: 1
Published: over 10 years ago
10.1186/s13071-019-3833-9
Vaccination of mice with a recombinant novel cathepsin B inhibits Trichinella spiralis development, reduces the fecundity and worm burdenCited by: 32
Author(s): Jing Cui, Yang Han, Xin Yue, Fang Liu, Yan Song, Shu Wei Yan, Jun Lei, Xi Zhang, Peng Jiang, Zhong Quan Wang
Software Mentions: 1
Published: over 6 years ago
10.1186/s13071-020-3981-y
Molecular characterization of a Trichinella spiralis elastase-1 and its potential as a diagnostic antigen for trichinellosisCited by: 34
Author(s): Hu Chen, Peng Jiang, Xin Yue, Jie Zeng, Xin Zhuo Zhang, Yan Song, Ruo Dan Liu, Xi Zhang, Zhong Quan Wang, Jing Cui
Software Mentions: 1
Published: over 6 years ago
10.1186/s13071-018-2667-1
Characterization and expression analysis of a newly identified glutathione S-transferase of the hard tick Haemaphysalis longicornis during blood-feedingCited by: 28
Author(s): Emmanuel Pacia Hernandez, Kodai Kusakisako, Melbourne Rio Talactac, Remil Linggatong Galay, Takeshi Hatta, Tomohide Matsuo, Kozo Fujisaki, Naotoshi Tsuji, Tetsuya Tanaka
Software Mentions: 1
Published: over 8 years ago
10.1186/s13071-019-3767-2
Identification of linear epitopes in SjSP-13 of Schistosoma japonicum using a GST-peptide fusion protein microplate arrayCited by: 3
Author(s): Li Ma, Wenrong Zhao, Xin Hou, Mengmeng Liu, Yanna Li, Li Shen, Xindong Xu
Software Mentions: 1
Published: over 6 years ago
10.1186/s13071-015-1070-4
Mosquito Rasputin interacts with chikungunya virus nsP3 and determines the infection rate in Aedes albopictusCited by: 38
Author(s): Jelke J. Fros, Corinne Geertsema, Karima Zouache, Jim Baggen, Natalia E. Domeradzka, Daniël M van Leeuwen, Jacky Flipse, Just M. Vlak, Anna‐Bella Failloux, Gorben P. Pijlman
Software Mentions: 1
Published: almost 11 years ago
10.1186/1756-3305-6-156
TIMPs of parasitic helminths – a large-scale analysis of high-throughput sequence datasetsCited by: 19
Author(s): Cinzia Cantacessi, Andreas Hofmann, Darren Pickering, Séverine Navarro, Makedonka Mitreva, Alex Loukas
Software Mentions: 1
Published: about 13 years ago
10.1186/s13071-020-04495-3
Downregulated RPS-30 in Angiostrongylus cantonensis L5 plays a defensive role against damage due to oxidative stressCited by: 3
Author(s): Weiwei Sun, Xiumei Yan, Qing Shi, Yuan-Jiao Zhang, Junting Huang, Huicong Huang, Hengzhen Shi, Bowen Yan
Software Mentions: 1
Published: over 5 years ago
10.1186/s13071-021-04933-w
The parasite Schistocephalus solidus secretes proteins with putative host manipulation functionsCited by: 10
Author(s): Chloé Suzanne Berger, Jérôme Laroche, Halim Maaroufi, Hélène Martin, Kyung‐Mee Moon, Christian R. Landry, Leonard J. Foster, Nadia Aubin‐Horth
Software Mentions: 1
Published: almost 5 years ago
10.1155/2019/9024894
Novel Compound Heterozygous PRKN Variants in a Han-Chinese Family with Early-Onset Parkinson’s DiseaseCited by: 2
Author(s): Kuan Fan, Pengzhi Hu, Chengyuan Song, Xiong Deng, Jie Wen, Yiming Liu, Hao Deng
Software Mentions: 1
Published: over 6 years ago
10.3390/pathogens10070861
Rapid Generation of Coronaviral Immunity Using Recombinant Peptide Modified NanodiamondsCited by: 9
Author(s): Rostyslav Bilyy, Quentin Pagneux, Nathan François, Galyna Bila, Roman Grytsko, Yuri Lebedin, Alexandre Barras, Jean Dubuisson, Sandrine Belouzard, Karin Séron, Rabah Boukherroub, Sabine Szunerits
Software Mentions: 1
Published: almost 5 years ago
10.3390/pathogens10040438
Longitudinal Development of Antibody Responses in COVID-19 Patients of Different Severity with ELISA, Peptide, and Glycan Arrays: An Immunological Case SeriesCited by: 18
Author(s): Jasmin Heidepriem, Christine Dahlke, Robin Kobbe, René Santer, Till Koch, Anahita Fathi, Bruna Mara Silva Seco, My L. Ly, Stefan Schmiedel, Dorothee Schwinge, Sonia Serna, Katrin Sellrie, Niels‐Christian Reichardt, Peter H. Seeberger, Marylyn M. Addo, Felix F. Loeffler
Software Mentions: 1
Published: over 5 years ago
10.3390/pathogens10040437
Association of Bovine Leukemia Virus-Induced Lymphoma with BoLA-DRB3 Polymorphisms at DNA, Amino Acid, and Binding Pocket Property LevelsCited by: 18
Author(s): Chieh-Wen Lo, Shin‐nosuke Takeshima, Kōsuke Okada, Etsuko Saitou, Tatsuo Fujita, Yasunobu Matsumoto, Satoshi Wada, Hidetoshi Inoko, Yoko Aida
Software Mentions: 1
Published: over 5 years ago
10.3390/pathogens10091199
Canine Morbillivirus from Colombian Lineage Exhibits In Silico and In Vitro Potential to Infect Human CellsCited by: 5
Author(s): Santiago Rendón-Marín, Carolina Quintero-Gil, Diego Guerra, Carlos Muskus, Julián Ruíz-Sáenz
Software Mentions: 1
Published: almost 5 years ago
10.3390/pathogens9100829
Genomic Diversity and Hotspot Mutations in 30,983 SARS-CoV-2 Genomes: Moving Toward a Universal Vaccine for the “Confined Virus”?Cited by: 45
Author(s): Tarek Alouane, Meriem Laamarti, Abdelomunim Essabbar, Mohammed Hakmi, El Mehdi Bouricha, Mohammed Walid Chemao-Elfihri, Souad Kartti, Nasma Boumajdi, Houda Bendani, Rokia Laamarti, Fatima Ghrifi, Loubna Allam, Tarik Aanniz, Mouna Ouadghiri, Naïma El Hafidi, Rachid El Jaoudi, Houda Benrahma, Jalil El Attar, Rachid Mentag, Laïla Sbabou, Chakib Nejjari, Saaïd Amzazi, Lahcen Belyamani, Azeddine Ibrahimi
Software Mentions: 1
Published: over 5 years ago
10.3390/pathogens10070902
Cyclophilins and Their Roles in Hepatitis C Virus and Flavivirus Infections: Perspectives for Novel Antiviral ApproachesCited by: 4
Author(s): Carla E. Gallardo-Flores, Che C. Colpitts
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12969-021-00612-3
Comment on: homozygous variant p. Arg90His in NCF1 is associated with early-onset interferonopathy: a case reportCited by: 1
Author(s): George N. Goulielmos, Maria I. Zervou, Elias Eliopoulos
Software Mentions: 1
Published: almost 5 years ago
10.7717/peerj.1674
Initiating a watch list for Ebola virus antibody escape mutationsCited by: 35
Author(s): Craig R. Miller, Erin L. Johnson, Aran Z. Burke, Kyle Martin, Tanya A. Miura, Holly A. Wichman, Celeste J. Brown, F. Marty Ytreberg
Software Mentions: 1
Published: over 10 years ago
10.7717/peerj.4270
Novel NAC-loaded poly(lactide-co-glycolide acid) nanoparticles for cataract treatment: preparation, characterization, evaluation of structure, cytotoxicity, and molecular docking studiesCited by: 11
Author(s): Yasemin Budama‐Kilinc, Rabia Çakır-Koç, Serda Kecel‐Gunduz, Yağmur Kökcü, Bilge Bıçak, Hande Mutlu, Ayşen E. Özel
Software Mentions: 1
Published: over 8 years ago
10.7717/peerj.2289
A multifunctional GH39 glycoside hydrolase from the anaerobic gut fungus<i>Orpinomyces</i>sp. strain C1ACited by: 24
Author(s): J. Morrison, Mostafa S. Elshahed, Noha H. Youssef
Software Mentions: 1
Published: almost 10 years ago
10.7717/peerj.5780
Plant-derived chimeric antibodies inhibit the invasion of human fibroblasts by<i>Toxoplasma gondii</i>Cited by: 7
Author(s): Sherene Swee Yin Lim, Kek Heng Chua, Greta Nölke, Holger Spiegel, Wai Leong Goh, Sek C. Chow, Boon Pin Kee, Rainer Fischer, Stefan Schillberg, Rofina Yasmin Othman
Software Mentions: 1
Published: over 7 years ago
10.7717/peerj.85
Molecular modeling and pharmacophore elucidation study of the Classical Swine Fever virus helicase as a promising pharmacological targetCited by: 22
Author(s): Dimitriοs Vlachakis, Σοφία Κοσσίδα
Software Mentions: 1
Published: about 13 years ago
10.7717/peerj.1528
Activity and biophysical inhibition resistance of a novel synthetic lung surfactant containing Super-Mini-B DATK peptideCited by: 8
Author(s): Robert H. Notter, Zhengdong Wang, Frans J. Walther
Software Mentions: 1
Published: over 10 years ago
10.7717/peerj.3160
<i>In-silico</i>prediction and modeling of the<i>Entamoeba histolytica</i>proteins: Serine-rich<i>Entamoeba histolytica</i>protein and 29 kDa Cysteine-rich proteaseCited by: 15
Author(s): Manoj Kumar, Subhash Chandra Parija
Software Mentions: 1
Published: about 9 years ago
10.7717/peerj.11232
Bioinformatic prediction of immunodominant regions in spike protein for early diagnosis of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Cited by: 5
Author(s): Shihao Zhuang, Lingli Tang, Yufeng Dai, Xiaojing Feng, Yutao Fang, Haoneng Tang, Ping Jiang, Xiang Wu, Hezhi Fang, Hongzhi Chen
Software Mentions: 1
Published: about 5 years ago
10.7717/peerj.10143
In silico structural homology modeling and characterization of multiple N-terminal domains of selected bacterial TcpsCited by: 2
Author(s): Mohammed Alaidarous
Software Mentions: 1
Published: over 5 years ago
10.7717/peerj.3341
Lid opening and conformational stability of T1 Lipase is mediated by increasing chain length polar solventsCited by: 19
Author(s): Jonathan Maiangwa, Mohd Shukuri Mohamad Ali, Abu Bakar Salleh, Raja Noor Zaliha Raja Abd Rahman, Yahaya M. Normi, Fairolniza Mohd Shariff, Thean Chor Leow
Software Mentions: 1
Published: about 9 years ago