Ecosyste.ms: Papers

10.3390/nu12113285

Opposing Effect of Naringenin and Quercetin on the Junctional Compartment of MDCK II Cells to Modulate the Tight Junction
Cited by: 11
Author(s): Mio Nakashima, Misaki Hisada, Nobuhito Goda, Takeshi Tenno, Ayaka Kotake, Yuko Inotsume, Ikuo Kameoka, Hidekazu Hiroaki
Software Mentions: 1
Published: about 4 years ago

10.1186/s12934-017-0737-2

Structure and application of antifreeze proteins from Antarctic bacteria
Cited by: 62
Author(s): Patricio A. Muñoz, Sebastián Márquez, Fernando González‐Nilo, Valeria Márquez-Miranda, Jenny M. Blamey
Software Mentions: 1
Published: over 7 years ago

10.1186/1475-2859-9-34

Isolation of an Escherichia coli K4 kfoC mutant over-producing capsular chondroitin
Cited by: 35
Author(s): Anna Zanfardino, Odile Francesca Restaino, Eugenio Notomista, Donatella Cimini, Chiara Schiraldi, Mario De Rosa, Maurilio De Felice, Mario Varcamonti
Software Mentions: 1
Published: over 14 years ago

10.1186/1475-2859-11-118

A dual tag system for facilitated detection of surface expressed proteins in Escherichia coli
Cited by: 18
Author(s): Johan Jarmander, Martin Gustavsson, Thi Huyen, Patrik Samuelson, Gen Larsson
Software Mentions: 1
Published: about 12 years ago

10.1186/s12934-018-1024-6

Characterization of a novel N-acylhomoserine lactonase, AidP, from Antarctic Planococcus sp.
Cited by: 18
Author(s): Wah-Seng See-Too, Peter Convey, David A. Pearce, Kok‐Gan Chan
Software Mentions: 1
Published: about 6 years ago

10.1186/s12934-018-0895-x

Use of chitin and chitosan to produce new chitooligosaccharides by chitinase Chit42: enzymatic activity and structural basis of protein specificity
Cited by: 55
Author(s): Peter Elias Kidibule, Paloma Santos‐Moriano, Elena Jiménez-Ortega, M. Ramirez-Escudero, M. Carmen Limón, Miguel Remacha, Francisco J. Plou, Julia Sanz‐Aparicio, María Fernández‐Lobato
Software Mentions: 1
Published: over 6 years ago

10.1099/mgen.0.000253

Sucrose 6F-phosphate phosphorylase: a novel insight in the human gut microbiome
Cited by: 11
Author(s): Alexandra Tauzin, Laëtitia Bruel, Élisabeth Laville, Cendrine Nicoletti, David Navarro, Bernard Henrissat, Josette Perrier, Gabrielle Potocki-Véronèse, Thierry Giardina, Mickaël Lafond
Software Mentions: 1
Published: over 5 years ago

10.1186/2042-5783-1-12

Prediction of a novel RNA binding domain in crocodilepox Zimbabwe Gene 157
Cited by: 1
Author(s): Nicole S. Little, Taylor T. H. Quon, Chris Upton
Software Mentions: 1
Published: about 13 years ago

10.1002/mbo3.210

O serotype‐independent susceptibility of <i>Pseudomonas aeruginosa</i> to lectin‐like pyocins
Cited by: 17
Author(s): Maarten G. K. Ghequire, Jozef Dingemans, Jean‐Paul Pirnay, Daniël De Vos, Pierre Cornélis, René De Mot
Software Mentions: 1
Published: about 10 years ago

10.1002/mbo3.339

Identification and functional analysis of a bacteriocin, pyocin S6, with ribonuclease activity from a <i>Pseudomonas aeruginosa</i> cystic fibrosis clinical isolate
Cited by: 27
Author(s): Jozef Dingemans, Maarten G. K. Ghequire, M. Craggs, René De Mot, Pierre Cornélis
Software Mentions: 1
Published: almost 9 years ago

10.1002/mbo3.306

Molecular insights into the enzymatic diversity of flavin‐trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm
Cited by: 22
Author(s): Ranjit K. Deka, Chad A. Brautigam, Wei Z. Liu, Diana R. Tomchick, Michael V. Norgard
Software Mentions: 1
Published: almost 9 years ago

10.1002/mbo3.346

The HigB/HigA toxin/antitoxin system of <i>Pseudomonas aeruginosa</i> influences the virulence factors pyochelin, pyocyanin, and biofilm formation
Cited by: 79
Author(s): Thomas K. Wood, Thomas K. Wood
Software Mentions: 1
Published: over 8 years ago

10.1002/mbo3.243

Molecular basis for the recognition of cyclic‐di‐ <scp>AMP</scp> by PstA, a P _II ‐like signal transduction protein
Cited by: 38
Author(s): Philip Young-Ill Choi, Kamakshi Sureka, Joshua J. Woodward, Liang Tong
Software Mentions: 1
Published: almost 10 years ago

10.1002/mbo3.366

Biochemical characterization of essential cell division proteins FtsX and FtsE that mediate peptidoglycan hydrolysis by PcsB in <i>Streptococcus pneumoniae</i>
Cited by: 19
Author(s): Ruchika Bajaj, Kevin E. Bruce, Amy L. Davidson, Britta E. Rued, Cynthia V. Stauffacher, Malcolm E. Winkler
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms8101594

Understanding High-Salt and Cold Adaptation of a Polyextremophilic Enzyme
Cited by: 24
Author(s): Ram Karan, Sam Mathew, Reyhan Muhammad, Didier B. Bautista, Malvina M. Vogler, Jörg Eppinger, Romina Oliva, Luigi Cavallo, Stefan T. Arold, Magnus Rueping
Software Mentions: 1
Published: about 4 years ago

10.3390/microorganisms8101610

Detailed Molecular Interactions of Favipiravir with SARS-CoV-2, SARS-CoV, MERS-CoV, and Influenza Virus Polymerases In Silico
Cited by: 26
Author(s): Mitsuru Sada, Takeshi Saraya, Haruyuki Ishii, Kaori Okayama, Yuriko Hayashi, Takeshi Tsugawa, Atsuyoshi Nishina, Koichi Murakami, Makoto Kuroda, Akihide Ryo, Hirokazu Kimura
Software Mentions: 1
Published: about 4 years ago

10.3390/microorganisms9040837

Structural Insights into the Methane-Generating Enzyme from a Methoxydotrophic Methanogen Reveal a Restrained Gallery of Post-Translational Modifications
Cited by: 9
Author(s): Julia M. Kurth, Marie-Caroline Müller, Cornelia U. Welte, T. Wagner
Software Mentions: 1
Published: over 3 years ago

10.3390/microorganisms8050703

Strigolactone Analogs Are Promising Antiviral Agents for the Treatment of Human Cytomegalovirus Infection
Cited by: 6
Author(s): Matteo Biolatti, Marco Blangetti, Giulia D’Arrigo, Francesca Spyrakis, Paola Cappello, Camilla Albano, Paolo Ravanini, Santo Landolfo, Marco De Andrea, Cristina Prandi, Valentina Dell’Oste
Software Mentions: 1
Published: over 4 years ago

10.3390/microorganisms8081250

Progress in Developing Inhibitors of SARS-CoV-2 3C-Like Protease
Cited by: 81
Author(s): Qingxin Li, CongBao Kang
Software Mentions: 1
Published: over 4 years ago

10.3390/microorganisms9091936

Gene Analysis, Cloning, and Heterologous Expression of Protease from a Micromycete Aspergillus ochraceus Capable of Activating Protein C of Blood Plasma
Cited by: 1
Author(s): С. К. Комаревцев, Peter Evseev, Mikhail M. Shneider, Е. А. Попова, Alexey E. Tupikin, В. Н. Степаненко, Мarsel R. Kabilov, С. В. Шабунин, A. A. Osmolovskiy, Konstantin A. Miroshnikov
Software Mentions: 1
Published: about 3 years ago

10.3390/microorganisms8010059

Novel Sequence Feature of SecA Translocase Protein Unique to the Thermophilic Bacteria: Bioinformatics Analyses to Investigate Their Potential Roles
Cited by: 3
Author(s): Bijendra Khadka, Dhillon Persaud, Radhey S. Gupta
Software Mentions: 1
Published: almost 5 years ago

10.3390/microorganisms9020293

Crossing the Wall: Characterization of the Multiheme Cytochromes Involved in the Extracellular Electron Transfer Pathway of Thermincola ferriacetica
Cited by: 11
Author(s): M. Faustino, Bruno M. Fonseca, Nazua L. Costa, Diana Lousa, Ricardo O. Louro, Catarina M. Paquete
Software Mentions: 1
Published: almost 4 years ago

10.3390/microorganisms9051109

Amino Acid Residues Involved in Inhibition of Host Gene Expression by Influenza A/Brevig Mission/1/1918 PA-X
Cited by: 2
Author(s): Kevin Chiem, Luis Martinez‐Sobrido, Aitor Nogales, Marta L. DeDiego
Software Mentions: 1
Published: over 3 years ago

10.3390/microorganisms9061300

Pathogen Moonlighting Proteins: From Ancestral Key Metabolic Enzymes to Virulence Factors
Cited by: 11
Author(s): Luís Franco-Serrano, David Sánchez-Redondo, Araceli Nájar-García, Sergio Hernández, Isaac Amela, Josep A. Pérez-Pons, Jaume Piñol, Angel Mozo-Villarías, Juan Cedano, Enrique Querol
Software Mentions: 1
Published: over 3 years ago

10.3390/microorganisms9010192

Identification of an Acidic Amino Acid Permease Involved in d-Aspartate Uptake in the Yeast Cryptococcus humicola
Cited by: 2
Author(s): Daiki Imanishi, Yoshio Kera, Shouji Takahashi
Software Mentions: 1
Published: almost 4 years ago

10.3390/microorganisms7110515

Functional Characterization and Structural Analysis of NADH Oxidase Mutants from Thermus thermophilus HB27: Role of Residues 166, 174, and 194 in the Catalytic Properties and Thermostability
Cited by: 2
Author(s): Javier Rocha-Martín, Pedro A. Sánchez‐Murcia, Fernando López‐Gallego, Aurélio Hidalgo, José Berenguer
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9081645

Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module
Cited by: 4
Author(s): Tilman Schirmer, Tjaart de Beer, Stefanie Tamegger, Alexander Harms, Nikolaus Dietz, David M. Dranow, Thomas E. Edwards, Peter J. Myler, Isabelle Phan, Christoph Dehio
Software Mentions: 1
Published: over 3 years ago

10.17912/micropub.biology.000322

A mutation that alters the 255th glutamate to lysine in RSKS-1/S6 kinase reliably extends the lifespan of C. elegans.
Cited by: 0
Author(s): Jae Hyun Lee, Sieun S. Kim, Seung-Jae Lee
Software Mentions: 1
Published: about 4 years ago

10.1080/23802359.2019.1633963

Mitochondrial DNA analyses found five novel mutations in idiopathic epilepsy patients
Cited by: 0
Author(s): Cuiping You, Rui Tao, Qiang Su, Yucheng Lu, Long Wang, Shu Liu, Lifen Wang, Limin Wang, Fuzhong Xue, Fengyuan Che
Software Mentions: 1
Published: over 5 years ago

10.1186/s13100-021-00240-4

The unusual structure of the PiggyMac cysteine-rich domain reveals zinc finger diversity in PiggyBac-related transposases
Cited by: 5
Author(s): Marc Guérineau, Luíza Mamigonian Bessa, Séverine Moriau, Ewen Lescop, François Bontems, Nathalie Mathy, E. Guittet, Julien Bischerour, Mireille Bétermier, Nelly Morellet
Software Mentions: 1
Published: over 3 years ago

10.1038/s41379-019-0372-z

Mapping the binding sites of antibodies utilized in programmed cell death ligand-1 predictive immunohistochemical assays for use with immuno-oncology therapies
Cited by: 56
Author(s): Nicola Lawson, Carly I Dix, Paul Scorer, Christopher J. Stubbs, Edmond Wong, Liam Hutchinson, Eileen McCall, M. Schimpl, Emma DeVries, Jill Walker, Gareth Williams, James Hunt, Craig Barker
Software Mentions: 1
Published: over 4 years ago

10.1016/j.mam.2012.12.009

The ABCs of membrane transporters in health and disease (SLC series): Introduction
Cited by: 457
Author(s): Matthias A. Hediger, Benjamin Clémençon, Robert E. Burrier, Elspeth A. Bruford
Software Mentions: 1
Published: over 11 years ago

10.1186/s13229-019-0286-0

Disruption of PHF21A causes syndromic intellectual disability with craniofacial anomalies, epilepsy, hypotonia, and neurobehavioral problems including autism
Cited by: 26
Author(s): Hyung Goo Kim, Jill A. Rosenfeld, Daryl A. Scott, Gerard Bénédicte, Jonathan D J Labonne, Juliette Brown, Marianne McGuire, Sonal Mahida, Sakkubai Naidu, Jacqueline Gutierrez, Gaëtan Lesca, Vincent Des Portes, Ange Line Bruel, Arthur Sorlin, Fan Xia, Yline Capri, Eric A. Muller, Dianalee McKnight, Erin Torti, Franz Rüschendorf, Oliver Hummel, Zeyaul Islam, Prasanna R. Kolatkar, Lawrence C. Layman, Dongseok Ryu, Il Keun Kong, Suneeta Madan‐Khetarpal, Cheol-Hee Kim
Software Mentions: 1
Published: about 5 years ago

10.1016/j.molbiopara.2009.12.011

Structure of Trypanosoma brucei glutathione synthetase: Domain and loop alterations in the catalytic cycle of a highly conserved enzyme
Cited by: 13
Author(s): Paul K. Fyfe, M.S. Alphey, William N. Hunter
Software Mentions: 1
Published: over 14 years ago

10.1093/molbev/msw061

Are There Rab GTPases in Archaea?
Cited by: 22
Author(s): Jarosław Surkont, José B. Pereira-Leal
Software Mentions: 1
Published: over 8 years ago

10.1093/molbev/msy094

Demographic History and Genetic Adaptation in the Himalayan Region Inferred from Genome-Wide SNP Genotypes of 49 Populations
Cited by: 34
Author(s): Elena Arciero, Thirsa Kraaijenbrink, Asan, Marc Haber, Massimo Mezzavilla, Qasim Ayub, Wei Wang, Zhaxi Pingcuo, Huanming Yang, Jian Wang, Mark A. Jobling, George van Driem, Yali Xue, Peter de Knijff, Chris Tyler‐Smith
Software Mentions: 1
Published: over 6 years ago

10.1186/s43556-020-00001-4

Structural characterization of the C-terminal domain of SARS-CoV-2 nucleocapsid protein
Cited by: 67
Author(s): Renjie Zhou, Rui Zeng, Albrecht von Brunn, Jian Lei
Software Mentions: 1
Published: over 4 years ago

10.1186/s43556-020-00005-0

Structural basis for the multimerization of nonstructural protein nsp9 from SARS-CoV-2
Cited by: 20
Author(s): Changhui Zhang, Yiping Chen, Li Li, Yan Yang, Jun He, Cheng Chen, Dan Su
Software Mentions: 1
Published: over 4 years ago

10.1186/s13041-017-0287-x

TBK1: a new player in ALS linking autophagy and neuroinflammation
Cited by: 207
Author(s): James A Oakes, Maria C. Davies, Mark O. Collins
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12943-019-1112-1

The PI3K subunits, P110α and P110β are potential targets for overcoming P-gp and BCRP-mediated MDR in cancer
Cited by: 68
Author(s): Lei Zhang, Yidong Li, Qianchao Wang, Zhuo Chen, Xiaoyun Li, Zhuo‐Xun Wu, Chaohua Hu, Dan Liao, Wei Zhang, Zhe‐Sheng Chen
Software Mentions: 1
Published: almost 5 years ago

10.1186/1476-4598-9-173

Identification and characterization of retinoblastoma gene mutations disturbing apoptosis in human breast cancers
Cited by: 28
Author(s): Elisabet Ognedal Berge, Stian Knappskog, Stephanie Geisler, Vidar Staalesen, Marec Pacal, Anne‐Lise Børresen‐Dale, Pål Puntervoll, Johan R. Lillehaug, Per Eystein Lønning
Software Mentions: 1
Published: over 14 years ago

10.1186/s12943-020-01192-8

Disruption of the RNA modifications that target the ribosome translation machinery in human cancer
Cited by: 29
Author(s): Maxime Janin, Laia Coll-SanMartin, Manel Esteller
Software Mentions: 1
Published: over 4 years ago

10.1186/s12943-015-0362-9

FL118, a novel camptothecin derivative, is insensitive to ABCG2 expression and shows improved efficacy in comparison with irinotecan in colon and lung cancer models with ABCG2-induced resistance
Cited by: 47
Author(s): David Westover, Xiang Ling, Hong Lam, Jacob Welch, Chunyang Jin, Céline Gongora, Maguy Del Rio, Mansukh C. Wani, Fengzhi Li
Software Mentions: 1
Published: over 9 years ago

10.1186/1476-4598-9-28

An evolved ribosome-inactivating protein targets and kills human melanoma cells in vitro and in vivo
Cited by: 15
Author(s): Melissa Cheung, Leigh Revers, Subodini Perampalam, Xin Wei, Reza Kiarash, David E. Green, Aws Abdul-Wahid, Jean Gariépy
Software Mentions: 1
Published: almost 15 years ago

10.1016/j.molcel.2020.09.024

Cancer-Associated Gain-of-Function Mutations Activate a SWI/SNF-Family Regulatory Hub
Cited by: 16
Author(s): Cedric R. Clapier, Naveen Verma, Timothy J. Parnell, Bradley R. Cairns
Software Mentions: 1
Published: about 4 years ago

10.1016/j.molcel.2014.12.015

Structure and Assembly Pathway of the Ribosome Quality Control Complex
Cited by: 156
Author(s): Sichen Shao, Alan Brown, S. Balaji, Ramanujan S. Hegde
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.molcel.2008.02.023

Architecture of a Serine Recombinase-DNA Regulatory Complex
Cited by: 52
Author(s): Kent W. Mouw, Sally‐J. Rowland, Mark Gajjar, Martin R. Boocock, W. Marshall Stark, Phoebe A. Rice
Software Mentions: 1
Published: over 16 years ago

10.1016/j.molcel.2009.07.027

A Method for Genetically Installing Site-Specific Acetylation in Recombinant Histones Defines the Effects of H3 K56 Acetylation
Cited by: 437
Author(s): Heinz Neumann, Susan M. Hancock, Ruth Buning, Andrew Routh, Lynda Chapman, Joanna Somers, Tom Owen-Hughes, John van Noort, Daniela Rhodes, Jason W. Chin
Software Mentions: 1
Published: about 15 years ago

10.1016/j.molcel.2019.03.037

Structural Basis of an Asymmetric Condensin ATPase Cycle
Cited by: 63
Author(s): Markus Hassler, Indra A. Shaltiël, Marc Kschonsak, Bernd Simon, Fabian Merkel, Lena Thärichen, H. Bailey, Jakub Macošek, Sol Bravo, J Metz, Janosch Hennig, Christian H. Haering
Software Mentions: 1
Published: over 5 years ago

10.1016/j.molcel.2015.06.033

Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex
Cited by: 192
Author(s): J.L. Llácer, Tanweer Hussain, Laura E. Marler, Colin Echeverría Aitken, Anil Thakur, Jon R. Lorsch, Alan G. Hinnebusch, V. Ramakrishnan
Software Mentions: 1
Published: over 9 years ago

10.1007/s11010-016-2892-x

Benzimidazole inhibitors of protein kinase CK2 potently inhibit the activity of atypical protein kinase Rio1
Cited by: 17
Author(s): Konrad Kubiński, Maciej Masłyk, Andrzej Orzeszko
Software Mentions: 1
Published: almost 8 years ago

10.1074/mcp.RA120.002414

The Mechanism of NEDD8 Activation of CUL5 Ubiquitin E3 Ligases
Cited by: 9
Author(s): Ryan Lumpkin, Alla Ahmad, Rachel Blake, Christopher J. Condon, Elizabeth A. Komives
Software Mentions: 1
Published: almost 4 years ago

10.1074/mcp.M115.051169

Protein–Protein Interactions Modulate the Docking-Dependent E3-Ubiquitin Ligase Activity of Carboxy-Terminus of Hsc70-Interacting Protein (CHIP)*
Cited by: 14
Author(s): Vikram Narayan, Vivien Landré, Jia Ning, Lenka Hernychová, Petr Müller, Chandra Verma, Malcolm D. Walkinshaw, Elizabeth A. Blackburn, Kathryn L. Ball
Software Mentions: 1
Published: about 9 years ago

10.1074/mcp.M115.048504

Serum Albumin Domain Structures in Human Blood Serum by Mass Spectrometry and Computational Biology
Cited by: 80
Author(s): Adam Belsom, Michael Schneider, Lutz Fischer, Oliver Brock, Juri Rappsilber
Software Mentions: 1
Published: over 8 years ago

10.1186/s40591-015-0044-4

Strategic internal covalent cross-linking of TNF produces a stable TNF trimer with improved TNFR2 signaling
Cited by: 15
Author(s): Liqin Ban, Willem M. Kühtreiber, John Butterworth, Yoshiaki Okubo, Eva Vanamee, Denise L. Faustman
Software Mentions: 1
Published: over 9 years ago

10.1186/1755-8166-7-S1-P62

Protein structure prediction for novel mutations in Arylsulfatase-A gene
Cited by: 0
Author(s): M. Bala Divya, Sakshi Jain, Shubha R. Phadke, Ratna Kishore, Mahesh Kamate, Neerja Gupta, Ashwin Dalal
Software Mentions: 1
Published: almost 11 years ago

10.1007/s11030-020-10055-9

Interaction between piperine and genes associated with sciatica and its mechanism based on molecular docking technology and network pharmacology
Cited by: 13
Author(s): Jiuwang Yu, Yuan Hu, Lidao Bao, Lengge Si
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules26082399

The Interaction of Human Glutathione Transferase GSTA1-1 with Reactive Dyes
Cited by: 4
Author(s): Mohammed H. Alqarni, Ahmed I. Foudah, Magdy Mohamed Muharram, Nikolaos E. Labrou
Software Mentions: 1
Published: over 3 years ago

10.3390/molecules25194565

Clean Grinding Technique: A Facile Synthesis and In Silico Antiviral Activity of Hydrazones, Pyrazoles, and Pyrazines Bearing Thiazole Moiety against SARS-CoV-2 Main Protease (Mpro)
Cited by: 48
Author(s): Sraa Abu‐Melha, Mastoura M. Edrees, Sayed M. Riyadh, Mohamad R. Abdelaziz, Abdo A. Elfiky, Sobhi M. Gomha
Software Mentions: 1
Published: about 4 years ago

10.3390/molecules24152724

Discovery of (5-Phenylfuran-2-yl)methanamine Derivatives as New Human Sirtuin 2 Inhibitors
Cited by: 4
Author(s): Lijiao Wang, Chao Li, Wei Chen, Chen Song, Xing Zhang, Yun Fan, Chen Wang, Yuanyuan Zhang, Shan Qian, Zhouyu Wang, Lingling Yang
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules22020259

The Architecture of Thiol Antioxidant Systems among Invertebrate Parasites
Cited by: 21
Author(s): Alberto Guevara-Flores, José de Jesús Martínez-González, Juan L. Rendón, Irene Patricia del Arenal Mena
Software Mentions: 1
Published: almost 8 years ago

10.3390/molecules25102461

β2-Homo-Amino Acid Scan of µ-Selective Opioid Tetrapeptide TAPP
Cited by: 6
Author(s): Dagmara Tymecka, Piotr F. J. Lipiński, Piotr Kossoń, Aleksandra Misicka
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules22111863

Benzoic Acid Derivatives with Trypanocidal Activity: Enzymatic Analysis and Molecular Docking Studies toward Trans-Sialidase
Cited by: 11
Author(s): Muhammad Kashif, Antonio Moreno-Herrera, Juan Carlos Villalobos-Rocha, Benjamín Nogueda‐Torres, Jaime Pérez‐Villanueva, Karen Rodríguez‐Villar, José L. Medina-Franco, Peterson de Andrade, Ivone Carvalho, Gildardo Rivera
Software Mentions: 1
Published: about 7 years ago

10.3390/molecules171113687

On the Catalytic Effect of Water in the Intramolecular Diels–Alder Reaction of Quinone Systems: A Theoretical Study
Cited by: 17
Author(s): Jorge Soto‐Delgado, Arie Aizman, Renato Contreras, Luís R. Domingo
Software Mentions: 1
Published: about 12 years ago

10.3390/molecules25225409

Critical Review of Existing MHC I Immunopeptidome Isolation Methods
Cited by: 13
Author(s): Alexandr Kuznetsov, A I Voronina, Vadim M. Govorun, Georgij Arapidi
Software Mentions: 1
Published: about 4 years ago

10.3390/molecules25102268

N-Alkyl-2-[4-(trifluoromethyl)benzoyl]hydrazine-1-carboxamides and Their Analogues: Synthesis and Multitarget Biological Activity
Cited by: 9
Author(s): Martin Krátký, Zsuzsa Baranyai, Šárka Štěpánkova, Katarína Svrčková, Markéta Švarcová, Jiřina Stolaříková, Lilla Horváth, Szilvia Bősze
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules25051198

A Second Look at the Crystal Structures of Drosophila melanogaster Acetylcholinesterase in Complex with Tacrine Derivatives Provides Insights Concerning Catalytic Intermediates and the Design of Specific Insecticides
Cited by: 9
Author(s): Florian Nachon, Terrone L. Rosenberry, Israel Silman, Joel L. Sussman
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules26041151

Suramin Targets the Conserved Ligand-Binding Pocket of Human Raf1 Kinase Inhibitory Protein
Cited by: 4
Author(s): Cheng Guo, Zhihua Wu, W. Sabrina Lin, Hao Xu, Ting Wei Chang, Yazhuang Dai, Donghai Lin
Software Mentions: 1
Published: almost 4 years ago

10.3390/molecules24224036

South African Abietane Diterpenoids and Their Analogs as Potential Antimalarials: Novel Insights from Hybrid Computational Approaches
Cited by: 5
Author(s): Thommas M. Musyoka, Özlem Tastan Bishop
Software Mentions: 1
Published: about 5 years ago

10.3390/molecules22101584

The Recognition of Calmodulin to the Target Sequence of Calcineurin—A Novel Binding Mode
Cited by: 7
Author(s): Chia-Lin Chyan, Deli Irene, Sin-Mao Lin
Software Mentions: 1
Published: about 7 years ago

10.3390/molecules26010033

Discovery and Biological Evaluation of CD147 N-Glycan Inhibitors: A New Direction in the Treatment of Tumor Metastasis
Cited by: 3
Author(s): Wenqian Li, Daojiong Wang, Yushu Ge, Lei Zhang, Jiang Wu, Dan Liú
Software Mentions: 1
Published: almost 4 years ago

10.3390/molecules25184082

Harringtonine Inhibits Zika Virus Infection through Multiple Mechanisms
Cited by: 12
Author(s): Zheng Zong Lai, Yi Jung Ho, Jeng‐Wei Lu
Software Mentions: 1
Published: about 4 years ago

10.3390/molecules23061413

Structure–Activity Relationship of the Tyrosinase Inhibitors Kuwanon G, Mulberrofuran G, and Albanol B from Morus Species: A Kinetics and Molecular Docking Study
Cited by: 21
Author(s): Prashamsa Koirala, Su Hui Seong, Yajuan Zhou, Srijan Shrestha, Hyun Ah Jung, Jae Sue Choi
Software Mentions: 1
Published: over 6 years ago

10.3390/molecules25092025

Identification of Transient Receptor Potential Vanilloid 3 Antagonists from Achillea alpina L. and Separation by Liquid-Liquid-Refining Extraction and High-Speed Counter-Current Chromatography
Cited by: 8
Author(s): Shiwei Sun, Rongrong Wang, Xinghuai Sun, Jiahe Fan, Hang Qi, Yang Liu, Guo-Qing Qin, Wei Wang
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules24081476

In Silico Evaluation of Ibuprofen and Two Benzoylpropionic Acid Derivatives with Potential Anti-Inflammatory Activity
Cited by: 21
Author(s): José Adolfo Homobono Machado Bittencourt, Moysés F. A. Neto, Pedro Sousa Lacerda, Renata C. V. S. Bittencourt, Raí C. Silva, Cleison C. Lobato, Luciane B. Silva, Franco Henrique Andrade Leite, Juliana Pavan Zuliani, Joaquín M C Rosa, Rosivaldo S. Borges, Cleydson Breno Rodrigues dos Santos
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules24122229

A Novel Cold-Adapted and Salt-Tolerant RNase R from Antarctic Sea-Ice Bacterium Psychrobacter sp. ANT206
Cited by: 12
Author(s): Yatong Wang, Yanhua Hou, Ping Nie, Yifan Wang, Xiulian Ren, Qifeng Wei, Quanfu Wang
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules24101945

Design of a Human Rhinovirus-14 3C Protease-Inducible Caspase-3
Cited by: 4
Author(s): Hanna J. Wagner, Wilfried Weber
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules24050881

APE-Gen: A Fast Method for Generating Ensembles of Bound Peptide-MHC Conformations
Cited by: 28
Author(s): Jayvee R. Abella, Dinler Amaral Antunes, Cecilia Clementi, Lydia E. Kavraki
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules26071943

Aha1 Exhibits Distinctive Dynamics Behavior and Chaperone-Like Activity
Cited by: 6
Author(s): Huifang Hu, Qing Wang, Jingwen Du, Zhijun Liu, Yiluan Ding, Hongjuan Xue, Chen Zhou, Linyin Feng, Naixia Zhang
Software Mentions: 1
Published: over 3 years ago

10.3390/molecules22081312

The Role of Solvent-Accessible Leu-208 of Cold-Active Pseudomonas fluorescens Strain AMS8 Lipase in Interfacial Activation, Substrate Accessibility and Low-Molecular Weight Esterification in the Presence of Toluene
Cited by: 28
Author(s): Norhayati Yaacob, Nor Ahmad Kamarudin, Adam Thean Chor Leow, Abu Bakar Salleh, Raja Raja Abd Rahman, Mohd Mohamad Ali
Software Mentions: 1
Published: over 7 years ago

10.3390/molecules26030691

Molecular Modelling Studies on Pyrazole Derivatives for the Design of Potent Rearranged during Transfection Kinase Inhibitors
Cited by: 5
Author(s): Swapnil P. Bhujbal, Seketoulie Keretsu, Seung Joo Cho
Software Mentions: 1
Published: almost 4 years ago

10.3390/molecules22122098

Comparison of the Binding of Reversible Inhibitors to Human Butyrylcholinesterase and Acetylcholinesterase: A Crystallographic, Kinetic and Calorimetric Study
Cited by: 162
Author(s): Terrone L. Rosenberry, Xavier Brazzolotto, Ian R. Macdonald, M. Wandhammer, M. Trovaslet-Leroy, Sultan Darvesh, Florian Nachon
Software Mentions: 1
Published: almost 7 years ago

10.3390/molecules26154540

Molecular Dynamics Simulations in Designing DARPins as Phosphorylation-Specific Protein Binders of ERK2
Cited by: 0
Author(s): Vertika Gautam, Piyarat Nimmanpipug, Sharifuddin M. Zain, Noorsaadah Abd. Rahman, Vannajan Sanghiran Lee
Software Mentions: 1
Published: over 3 years ago

10.3390/molecules24040682

Synthesis, Characterization, and Biological Activity of a Novel Series of Benzo[4,5]imidazo[2,1-b]thiazole Derivatives as Potential Epidermal Growth Factor Receptor Inhibitors
Cited by: 19
Author(s): Xin Deng, Xiaoyu Tan, Tiantian An, Qingqing Ma, Zhe Jin, Ce Wang, Qingguo Meng, Chun Hu
Software Mentions: 1
Published: almost 6 years ago

10.3390/molecules26103054

Identification of the Active Principle Conferring Anti-Inflammatory and Antinociceptive Properties in Bamboo Plant
Cited by: 0
Author(s): Bruna Araújo de Sousa, Osmar N. Silva, William F. Porto, T. L. Rocha, Luciano Silva, Ana Paula Ferreira Leal, Danieli Fernanda Buccini, James Oluwagbamigbe Fajemiroye, Ruy de Araújo Caldas, Octávio L. Franco, Maria Fátima Grossi-de-Sá, César de la Fuente-Núñez, Susana Elisa Moreno
Software Mentions: 1
Published: over 3 years ago

10.3390/molecules26010185

Anticancer Activity of Lesbicoumestan in Jurkat Cells via Inhibition of Oxidative Stress-Mediated Apoptosis and MALT1 Protease
Cited by: 5
Author(s): Jooeun Lee, Bo Fang, Nguyễn Thị Thanh Thủy, Jaewoo Hong, Ji Shin Lee, Namki Cho, Hee Min Yoo
Software Mentions: 1
Published: almost 4 years ago

10.3390/molecules19021672

Docking Studies in Target Proteins Involved in Antibacterial Action Mechanisms: Extending the Knowledge on Standard Antibiotics to Antimicrobial Mushroom Compounds
Cited by: 35
Author(s): Maria José Alves, Hugo J.C. Froufe, Ana F T Costa, Anabela F Santos, Liliana G Oliveira, Sara R M Osório, Rui M.V. Abreu, Manuela Pintado, Isabel C.F.R. Ferreira
Software Mentions: 1
Published: almost 11 years ago

10.3390/molecules23123281

Purification and Functional Characterization of the C-Terminal Domain of the β-Actin-Binding Protein AIM1 In Vitro
Cited by: 1
Author(s): Fang Wu, Liangkai Cheng, Yu Qi, Lin Zhang, Hong Li, Caiyan Wang
Software Mentions: 1
Published: almost 6 years ago

10.3390/molecules25030627

TLR4-Targeting Therapeutics: Structural Basis and Computer-Aided Drug Discovery Approaches
Cited by: 53
Author(s): Qurat Ul Ain, Maria Batool, Sangdun Choi
Software Mentions: 1
Published: almost 5 years ago

10.3390/molecules24152786

Inhibiting Acetylcholinesterase to Activate Pleiotropic Prodrugs with Therapeutic Interest in Alzheimer’s Disease
Cited by: 17
Author(s): François-Xavier Toublet, Cédric Lecoutey, Julien Lalut, Bérénice Hatat, Audrey Davis, Marc Since, Sophie Corvaisier, Thomas Freret, Jana Sopkova de Oliveira Santos, Sylvie Claeysen, Michel Boulouard, Patrick Dallemagne, Christophe Rochais
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules26144321

Doxycycline Interferes with Zika Virus Serine Protease and Inhibits Virus Replication in Human Skin Fibroblasts
Cited by: 4
Author(s): Teow Chong Teoh, Sawsam J. Al-Harbi, Ammar Y. Abdulrahman, Hussin A. Rothan
Software Mentions: 1
Published: over 3 years ago

10.3390/molecules25153425

Effect of Distance from Catalytic Synergy Group to Iron Porphyrin Center on Activity of G-Quadruplex/Hemin DNAzyme
Cited by: 5
Author(s): Dehui Qiu, Jingang Mo, Yuan Liu, Jiangyan Zhang, Yongqiang Cheng, Xiaobo Zhang
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules24183215

Molecular Dynamics Gives New Insights into the Glucose Tolerance and Inhibition Mechanisms on β-Glucosidases
Cited by: 16
Author(s): Leon S. C. Costa, Diego Mariano, Rafael E. O. Rocha, Johannes Kraml, Carlos Henrique da Silveira, Klaus R. Liedl, Raquel Cardoso de Melo‐Minardi, Leonardo Henrique França de Lima
Software Mentions: 1
Published: about 5 years ago

10.3390/molecules19067057

Mesoporous Silicas with Tunable Morphology for the Immobilization of Laccase
Cited by: 46
Author(s): Victoria Gascón, Isabel Dı́az, Carlos Márquez‐Álvarez, Rosa M. Blanco
Software Mentions: 1
Published: over 10 years ago

10.3390/molecules25235580

Anti-Allergic Potential of Cinnamaldehyde via the Inhibitory Effect of Histidine Decarboxylase (HDC) Producing Klebsiella pneumonia
Cited by: 10
Author(s): Lorina Ineta Badger-Emeka, Promise Madu Emeka, Krishnaraj Thirugnanasambantham, Hairul-Islam Mohamed Ibrahim
Software Mentions: 1
Published: almost 4 years ago

10.3390/v12030333

Preparation, Characterization and Diagnostic Valuation of Two Novel Anti-HPV16 E7 Oncoprotein Monoclonal Antibodies
Cited by: 3
Author(s): Renjian Hu, Zhen Dong, Kui Zhang, Guoqing Pan, Chongyang Li, Hongjuan Cui
Software Mentions: 1
Published: over 4 years ago

10.3390/v12030276

Influenza A Virus Antibodies with Antibody-Dependent Cellular Cytotoxicity Function
Cited by: 19
Author(s): Rongyuan Gao, Zizhang Sheng, Chithra Sreenivasan, Dan Dan Wang, Liang Feng
Software Mentions: 1
Published: over 4 years ago

10.3390/v12050502

Molecular Evolution and Structural Mapping of N-Terminal Domain in Spike Gene of Middle East Respiratory Syndrome Coronavirus (MERS-CoV)
Cited by: 4
Author(s): Asif Naeem, Maaweya E. Hamed, Majed F. Alghoribi, Waleed Aljabr, Hadel Alsaran, Mushira Enani, Bandar Alosaimi
Software Mentions: 1
Published: over 4 years ago

10.3390/v12050518

Influenza Virus Like Particles (VLPs): Opportunities for H7N9 Vaccine Development
Cited by: 23
Author(s): Peter Pushko, Irina Tretyakova
Software Mentions: 1
Published: over 4 years ago

10.3390/v12060687

Live Visualization of Hemagglutinin Dynamics during Infection by Using a Novel Reporter Influenza A Virus
Cited by: 2
Author(s): Luiz Gustavo dos Anjos Borges, Giuseppe Pisanelli, Oyahida Khatun, Adolfo Garcı́a-Sastre, Shashank Tripathi
Software Mentions: 1
Published: over 4 years ago