10.3390/biom11040518

Allosteric Kinase Inhibitors Reshape MEK1 Kinase Activity Conformations in Cells and In Silico
Cited by: 4
Author(s): Jakob Fleischmann, Andreas Feichtner, Louis De Falco, Valentina Kugler, Selina Schwaighofer, Roland G. Huber, Eduard Stefan
Software Mentions: 1
Published: over 5 years ago

10.3390/biom10121631

Structure and Characterization of Phosphoglucomutase 5 from Atlantic and Baltic Herring—An Inactive Enzyme with Intact Substrate Binding
Cited by: 3
Author(s): Robert Gustafsson, Ulrich Eckhard, Weihua Ye, Erik D Enbody, Mats E. Pettersson, Per Jemth, Leif Andersson, M. Selmer
Software Mentions: 1
Published: over 5 years ago

10.3390/biom11040533

Structure and Dynamics of an Archeal Monoglyceride Lipase from Palaeococcus ferrophilus as Revealed by Crystallography and In Silico Analysis
Cited by: 1
Author(s): Geoffray Labar, Nathalie Brandt, Amaury Flaba, Johan Wouters, Laurence Leherte
Software Mentions: 1
Published: over 5 years ago

10.3390/biom11030414

Trehalose Restrains the Fibril Load towards α-Lactalbumin Aggregation and Halts Fibrillation in a Concentration-Dependent Manner
Cited by: 10
Author(s): Sania Bashir, Ishfaq Ahmad Ahanger, Anas Shamsi, Mohamed F. Alajmi, Afzal Hussain, Hani Choudhry, Faizan Ahmad, Md. Imtaiyaz Hassan, Asimul Islam
Software Mentions: 1
Published: over 5 years ago

10.3390/biom10121682

S-adenosyl-l-homocysteine Hydrolase: A Structural Perspective on the Enzyme with Two Rossmann-Fold Domains
Cited by: 8
Author(s): Krzysztof Brzeziński
Software Mentions: 1
Published: over 5 years ago

10.3390/biom9090508

Mutational Analysis of a Highly Conserved PLSSMXP Sequence in the Small Subunit of Bacillus licheniformis γ-Glutamyltranspeptidase
Cited by: 3
Author(s): Meng-Chun Chi, Huei-Fen Lo, Min-Guan Lin, Yiyu Chen, Tzu-Fan Wang, Long-Liu Lin
Software Mentions: 1
Published: almost 7 years ago

10.3390/biom10010072

Kinetic, Thermodynamic, and Crystallographic Studies of 2-Triazolylthioacetamides as Verona Integron-Encoded Metallo-β-Lactamase 2 (VIM-2) Inhibitor
Cited by: 7
Author(s): Xiang Yang, Yuejuan Zhang, Ying Ge, Yajun Zhou, Cheng Chen, Weixiao Yuan Wahlgren, Xiangshi Tan, Xi Chen, Ke‐Wu Yang
Software Mentions: 1
Published: over 6 years ago

10.3390/biom11060807

Activation of Anopheles stephensi Pantothenate Kinase and Coenzyme A Biosynthesis Reduces Infection with Diverse Plasmodium Species in the Mosquito Host
Cited by: 3
Author(s): Raquel M. Simão-Gurge, Neha Thakre, Jessica Strickland, Jun Isoe, Lillian R. Delacruz, Brandi K. Torrevillas, Anna Maria Meyer Maciel Rodríguez, Michael A. Riehle, Shirley Luckhart
Software Mentions: 1
Published: about 5 years ago

10.3390/biom9030116

Electrostatics of Tau Protein by Molecular Dynamics
Cited by: 19
Author(s): Tarsila G. Castro, Florentina-Daniela Munteanu, Artur Cavaco-Paulo
Software Mentions: 1
Published: over 7 years ago

10.3390/biom10121627

Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea
Cited by: 2
Author(s): Jaunius Urbonavičius, Daiva Tauraitė
Software Mentions: 1
Published: over 5 years ago

10.3390/biom11040523

More Than Meets the Eye: Revisiting the Roles of Heat Shock Factor 4 in Health and Diseases
Cited by: 8
Author(s): Saiful Effendi Syafruddin, Sheen Ling, Teck Yew Low, M. Aiman Mohtar
Software Mentions: 1
Published: over 5 years ago

10.3390/biom9120852

Molecular Dynamics Simulation of Transmembrane Transport of Chloride Ions in Mutants of Channelrhodopsin
Cited by: 3
Author(s): Wenying Zhang, Ting Yang, Shuangyan Zhou, Jie Cheng, Shuai Yuan, Glenn V. Lo, Yusheng Dou
Software Mentions: 1
Published: over 6 years ago

10.3390/biom10091287

Identification and Characterization of a Novel Thermostable and Salt-Tolerant β-1,3 Xylanase from Flammeovirga pacifica Strain WPAGA1
Cited by: 6
Author(s): Yi Zhou, Zhengwen Cai, Bo Zeng, Runying Zeng, Guangya Zhang
Software Mentions: 1
Published: almost 6 years ago

10.3390/biom10040532

Structural Dynamics of the Lipid Antigen-Binding Site of CD1d Protein
Cited by: 4
Author(s): Bruno Cuevas-Zuviría, Marina Mínguez-Toral, Araceli Díaz‐Perales, María Garrido‐Arandia, Luis F. Pacios
Software Mentions: 1
Published: over 6 years ago

10.3390/biom11030410

Actin-Resistant DNase1L2 as a Potential Therapeutics for CF Lung Disease
Cited by: 7
Author(s): Danila Delfino, Giulia Mori, Claudio Rivetti, Antonella Grigoletto, Gloria Bizzotto, Cristian Cavozzi, Marco Malatesta, D. Cavazzini, Gianfranco Pasut, Riccardo Percudani
Software Mentions: 1
Published: over 5 years ago

10.3390/biom8020015

An Arabidopsis Clathrin Assembly Protein with a Predicted Role in Plant Defense Can Function as an Adenylate Cyclase
Cited by: 38
Author(s): Patience Chatukuta, Tshegofatso Bridget Dikobe, David T. Kawadza, Katlego S. Sehlabane, Mutsa M. Takundwa, Aloysius Wong, Chris Gehring, Oziniel Ruzvidzo
Software Mentions: 1
Published: over 8 years ago

10.3390/biom10020304

Targeting the Class A Carbapenemase GES-5 via Virtual Screening
Cited by: 1
Author(s): Raphael Klein, Laura Cendron, Martina Montanari, Pierangelo Bellio, Giuseppe Celenza, Lorenzo Maso, Donatella Tondi, Ruth Brenk
Software Mentions: 1
Published: over 6 years ago

10.3390/biom9120870

Biological Evaluation, Molecular Docking, and SAR Studies of Novel 2-(2,4-Dihydroxyphenyl)-1H- Benzimidazole Analogues
Cited by: 12
Author(s): Joanna Matysiak, Alicja Skrzypek, Monika Karpińska, Kamila Czarnecka, Paweł Szymański, Marek Bajda, Andrzej Niewiadomy
Software Mentions: 1
Published: over 6 years ago

10.3390/biom11050657

Green Production of Cladribine by Using Immobilized 2′-Deoxyribosyltransferase from Lactobacillus delbrueckii Stabilized through a Double Covalent/Entrapment Technology
Cited by: 6
Author(s): Cintia W. Rivero, Natalia Soledad García, Jesús Fernández‐Lucas, Lorena Betancor, Gustavo Pablo Romanelli, Jorge A. Trelles
Software Mentions: 1
Published: about 5 years ago

10.3390/biom11050620

Identification and Computational Analysis of Novel Pathogenic Variants in Pakistani Families with Diverse Epidermolysis Bullosa Phenotypes
Cited by: 9
Author(s): Fehmida Farid Khan, Nauman Ali Khan, Sakina Rehman, Amir Ejaz, Uzma Ali, Muhammad Erfan, Zubair M. Ahmed, Muhammad Naeem
Software Mentions: 1
Published: about 5 years ago

10.3390/biom11081101

LRRK2 Targeting Strategies as Potential Treatment of Parkinson’s Disease
Cited by: 17
Author(s): Dominika Wojewska, Arjan Kortholt
Software Mentions: 1
Published: almost 5 years ago

10.3390/biom11060836

Elaiophylin Is a Potent Hsp90/ Cdc37 Protein Interface Inhibitor with K-Ras Nanocluster Selectivity
Cited by: 5
Author(s): Farid Ahmad Siddiqui, Vladimir R. Vukić, Tiina A. Salminen, Daniel Abankwa
Software Mentions: 1
Published: about 5 years ago

10.3390/biom9120806

Chemical Constituents of the Leaves of Butterbur (Petasites japonicus) and Their Anti-Inflammatory Effects
Cited by: 18
Author(s): Jin Su Lee, Miran Jeong, Sangsu Park, Seung Mok Ryu, Jun Lee, Ziteng Song, Yuanqiang Guo, Jung‐Hye Choi, Dong‐Ho Lee, Dae Sik Jang
Software Mentions: 1
Published: over 6 years ago

10.3390/biom11020169

Molecular Modeling Studies on the Multistep Reactivation Process of Organophosphate-Inhibited Acetylcholinesterase and Butyrylcholinesterase
Cited by: 6
Author(s): Jakub Jończyk, Jędrzej Kukułowicz, Kamil Łątka, Barbara Malawska, Young‐Sik Jung, Kamil Musílek, Marek Bajda
Software Mentions: 1
Published: over 5 years ago

10.3390/biom9110643

Evaluation of Novel Chalcone-Thiosemicarbazones Derivatives as Potential Anti-Leishmania amazonensis Agents and Its HSA Binding Studies
Cited by: 12
Author(s): Edinéia Pastro Mendes, Carla Marins Goulart, Otávio Augusto Chaves, Viviane dos Santos Faiões, Marilene M. Canto-Carvalho, Gérzia C. Machado, Eduardo Caio Torres-Santos, Aurea Echevarrı́a
Software Mentions: 1
Published: over 6 years ago

10.3390/biom9110699

Dithiocarbamate as a Valuable Scaffold for the Inhibition of Metallo-β-Lactmases
Cited by: 14
Author(s): Ying Ge, Li-Wei Xu, Ya Liu, Le-Yun Sun, Guang Han, Jiaqi Li, Ke‐Wu Yang
Software Mentions: 1
Published: over 6 years ago

10.3390/biom11010046

Molecular Targeting of VEGF with a Suramin Fragment–DOCA Conjugate by Mimicking the Action of Low Molecular Weight Heparins
Cited by: 4
Author(s): Jooho Park, Tae-Bong Kang, Ji-Hong Lim, Hyung‐Sik Won
Software Mentions: 1
Published: over 5 years ago

10.3390/biom11050718

Alpha-Synuclein and Mitochondrial Dysfunction in Parkinson’s Disease: The Emerging Role of VDAC
Cited by: 28
Author(s): Pierpaolo Risiglione, Federica Zinghirino, Maria Carmela Di Rosa, Andrea Magrì, Angela Messina
Software Mentions: 1
Published: about 5 years ago

10.3390/biom10040639

Meridianins and Lignarenone B as Potential GSK3β Inhibitors and Inductors of Structural Neuronal Plasticity
Cited by: 15
Author(s): Laura Llorach-Parés, Ened Rodríguez-Urgellés, Alfons Nonell-Canals, Jordi Alberch, Conxita Ávila, Melchor Sánchez-Martínez, Albert Giralt
Software Mentions: 1
Published: about 6 years ago

10.3390/biom11050740

Evaluating Mechanisms of IDH1 Regulation through Site-Specific Acetylation Mimics
Cited by: 3
Author(s): Joi Weeks, Alexandra I Strom, Vinnie Widjaja, Sati Alexander, Dahra K Pucher, Christal D. Sohl
Software Mentions: 1
Published: about 5 years ago

10.3390/biom11040602

Regulation of Phosphoinositide Levels in the Retina by Protein Tyrosine Phosphatase 1B and Growth Factor Receptor-Bound Protein 14
Cited by: 0
Author(s): Raju V S Rajala, Austin McCauley, Kenneth Teel, Ammaji Rajala
Software Mentions: 1
Published: about 5 years ago

10.3390/biom11070919

Remdesivir MD Simulations Suggest a More Favourable Binding to SARS-CoV-2 RNA Dependent RNA Polymerase Mutant P323L Than Wild-Type
Cited by: 20
Author(s): Anwar Mohammad, Fahd Al-Mulla, Dong Wei, Jehad Abubaker
Software Mentions: 1
Published: about 5 years ago

10.3390/biom9060238

COP9 Signalosome Interaction with UspA/Usp15 Deubiquitinase Controls VeA-Mediated Fungal Multicellular Development
Cited by: 15
Author(s): Cindy Meister, Karl G. Thieme, Anna M. Köhler, Kerstin Schmitt, Oliver Valerius, Gerhard H. Braus
Software Mentions: 1
Published: about 7 years ago

10.3390/biom10030455

Biological Evaluation and Docking Studies of New Carbamate, Thiocarbamate, and Hydrazide Analogues of Acyl Homoserine Lactones as Vibrio fischeri-Quorum Sensing Modulators
Cited by: 3
Author(s): Qiang Zhang, Yves Queneau, Laurent Soulère
Software Mentions: 1
Published: over 6 years ago

10.3390/biom10071066

Proteomic and Bioinformatic Investigations of Heat-Treated Anisakis simplex Third-Stage Larvae
Cited by: 7
Author(s): Maciej Kochanowski, Mirosław Różycki, Joanna Dąbrowska, Aneta Bełcik, Jacek Karamon, Jacek Sroka, Tomasz Cencek
Software Mentions: 1
Published: almost 6 years ago

10.3390/biom9100546

NMDA Receptor Opening and Closing—Transitions of a Molecular Machine Revealed by Molecular Dynamics
Cited by: 12
Author(s): Jiří Černý, Paulína Božíková, Aleš Balík, Sérgio M. Marques, Ladislav Vyklický
Software Mentions: 1
Published: almost 7 years ago

10.3390/biom8040148

Dual-Family Peptidylprolyl Isomerases (Immunophilins) of Select Monocellular Organisms
Cited by: 9
Author(s): Sailen Barik
Software Mentions: 1
Published: over 7 years ago

10.3390/biom10060828

Heparin Blocks the Inhibition of Tissue Kallikrein 1 by Kallistatin through Electrostatic Repulsion
Cited by: 4
Author(s): Lifeng Ma, Jiawei Wu, Ying Zheng, Zimei Shu, Zhenquan Wei, Yin-Biao Sun, Robin W. Carrell, Aiwu Zhou
Software Mentions: 1
Published: about 6 years ago

10.3390/biom2010143

Mortalin, Apoptosis, and Neurodegeneration
Cited by: 57
Author(s): Carolina Londoño, Cristina Osorio, Vivian Gama, Óscar Álzate
Software Mentions: 1
Published: over 14 years ago

10.3390/biom10081125

Thiol Redox Regulation of Plant β-Carbonic Anhydrase
Cited by: 10
Author(s): Anna Dreyer, Alexander Schackmann, Alexandre Kriznik, Kamel Chibani, Corinna Wesemann, Lara Vogelsang, André Beyer, Karl‐Josef Dietz
Software Mentions: 1
Published: almost 6 years ago

10.3390/biom9080371

Structural Changes in the Acceptor Site of Photosystem II upon Ca2+/Sr2+ Exchange in the Mn4CaO5 Cluster Site and the Possible Long-Range Interactions
Cited by: 2
Author(s): Faisal Hammad Mekky Koua
Software Mentions: 1
Published: almost 7 years ago

10.3390/biom11091391

First Dye-Decolorizing Peroxidase from an Ascomycetous Fungus Secreted by Xylaria grammica
Cited by: 5
Author(s): Virginia Wambui Kimani, René Ullrich, Enrico Büttner, Robert Herzog, Harald Kellner, Nico Jehmlich, Martin Hofrichter, Christiane Liers
Software Mentions: 1
Published: almost 5 years ago

10.3390/biom11010003

Pursuing the Complexity of Alzheimer’s Disease: Discovery of Fluoren-9-Amines as Selective Butyrylcholinesterase Inhibitors and N-Methyl-d-Aspartate Receptor Antagonists
Cited by: 4
Author(s): J. Konečný, Anna Misiachna, Martina Hrabinová, Lenka Pulkrabkova, Markéta Benková, Lukáš Prchal, Tomáš Kučera, Tereza Kobrlová, Vladimir Finger, Marharyta Kolcheva, Štěpán Kortus, Daniel Jun, Marián Valko, Martin Hořák, Ondřej Soukup, Jan Korábečný
Software Mentions: 1
Published: over 5 years ago

10.3390/biom11091294

Subtype Differences in the Interaction of HIV-1 Matrix with Calmodulin: Implications for Biological Functions
Cited by: 1
Author(s): Alexej Dick, Chantal Simon
Software Mentions: 1
Published: almost 5 years ago

10.3390/biom6020027

The Diversity of Ribonuclease P: Protein and RNA Catalysts with Analogous Biological Functions
Cited by: 58
Author(s): Bradley P. Klemm, Nancy Wu, Yu Chen, Xin Liu, Kipchumba Kaitany, Michael J. Howard, Carol A. Fierke
Software Mentions: 1
Published: about 10 years ago

10.3390/biom9120786

Molecular Characterization of a Novel Family VIII Esterase with β-Lactamase Activity (PsEstA) from Paenibacillus sp.
Cited by: 9
Author(s): Sena Kwon, Woo-Kyoung Yoo, Young‐Ok Kim, Kyeong Kyu Kim, T Doohun Kim
Software Mentions: 1
Published: over 6 years ago

10.3390/biom8030057

Calmodulin: A Multitasking Protein in Kv7.2 Potassium Channel Functions
Cited by: 15
Author(s): Alessandro Alaimo, Álvaro Villarroel
Software Mentions: 1
Published: almost 8 years ago

10.3390/biom11050653

Computational Identification of Potential Anti-Inflammatory Natural Compounds Targeting the p38 Mitogen-Activated Protein Kinase (MAPK): Implications for COVID-19-Induced Cytokine Storm
Cited by: 22
Author(s): Seth O. Asiedu, Samuel K. Kwofie, Emmanuel Broni, Michael D. Wilson
Software Mentions: 1
Published: about 5 years ago

10.3390/biom9080379

Exploring Structure-Activity Relationship in Tacrine-Squaramide Derivatives as Potent Cholinesterase Inhibitors
Cited by: 22
Author(s): Barbora Svobodová, Eva Mezeiová, Vendula Hepnarová, Martina Hrabinová, Lubica Múčková, Tereza Kobrlová, Daniel Jun, Ondřej Soukup, María Luisa Jimeno, José Marco‐Contelles, Jan Korábečný
Software Mentions: 1
Published: almost 7 years ago

10.3390/biom9120864

Critical Factors in Human Antizymes that Determine the Differential Binding, Inhibition, and Degradation of Human Ornithine Decarboxylase
Cited by: 2
Author(s): Ju-Yi Hsieh, Yen Chin Liu, I-Ting Cheng, Chu-Ju Lee, Yu-Hsuan Wang, Yi-Shiuan Fang, Yiliang Liu, Guang‐Yaw Liu, Hui‐Chih Hung
Software Mentions: 1
Published: over 6 years ago

10.3390/biom6030030

Mechanistic and Structural Studies of Protein-Only RNase P Compared to Ribonucleoproteins Reveal the Two Faces of the Same Enzymatic Activity
Cited by: 8
Author(s): Cédric Schelcher, Claude Sauter, Philippe Giegé
Software Mentions: 1
Published: about 10 years ago

10.3390/biom10020176

Discrimination of Naturally-Occurring 2-Arylbenzofurans as Cyclooxygenase-2 Inhibitors: Insights into the Binding Mode and Enzymatic Inhibitory Activity
Cited by: 8
Author(s): Ericsson Coy-Barrera
Software Mentions: 1
Published: over 6 years ago

10.3390/biom10010076

Characterization of Matrix Metalloprotease-9 Gene from Nile tilapia (Oreochromis niloticus) and Its High-Level Expression Induced by the Streptococcus agalactiae Challenge
Cited by: 4
Author(s): Faya Liang, Qin‐Qing Wang, Yupeng Jiang, Bei-Ying Yue, Qing Zhou, Jiang-Hai Wang
Software Mentions: 1
Published: over 6 years ago

10.3390/biom9110704

Molecular Characterization of a Novel Cold-Active Hormone-Sensitive Lipase (HaHSL) from Halocynthiibacter Arcticus
Cited by: 9
Author(s): Ly Le, Woo-Kyoung Yoo, Chang-Woo Lee, Ying Wang, Sangeun Jeon, Kyeong Kyu Kim, Jun Hyuck Lee, T Doohun Kim
Software Mentions: 1
Published: over 6 years ago

10.3390/biom9090495

Unraveling Binding Mechanism of Alzheimer’s Drug Rivastigmine Tartrate with Human Transferrin: Molecular Docking and Multi-Spectroscopic Approach towards Neurodegenerative Diseases
Cited by: 42
Author(s): Anas Shamsi, Taj Mohammad, Mohd Shahnawaz Khan, Moyad Shahwan, Fohad Mabood Husain, Tabish Rehman, Md. Imtaiyaz Hassan, Faizan Ahmad, Asimul Islam
Software Mentions: 1
Published: almost 7 years ago

10.3390/biom9100585

Bio-Guided Fractionation of Ethanol Extract of Leaves of Esenbeckia alata Kunt (Rutaceae) Led to the Isolation of Two Cytotoxic Quinoline Alkaloids: Evidence of Selectivity Against Leukemia Cells
Cited by: 8
Author(s): Juan Manuel Álvarez-Caballero, Luís Enríque Cuca Suárez, Ericsson Coy-Barrera
Software Mentions: 1
Published: over 6 years ago

10.3390/biom10101408

Modulation of Guanylate Cyclase Activating Protein 1 (GCAP1) Dimeric Assembly by Ca2+ or Mg2+: Hints to Understand Protein Activity
Cited by: 10
Author(s): Francesco Bonì, Valerio Marino, Carlo Bidoia, Eloise Mastrangelo, Alberto Barbiroli, Daniele Dell’Orco, Mario Milani
Software Mentions: 1
Published: almost 6 years ago

10.3390/biom9090395

How the 26S Proteasome Degrades Ubiquitinated Proteins in the Cell
Cited by: 14
Author(s): Bernat Coll-Martínez, Bernat Crosas
Software Mentions: 1
Published: almost 7 years ago

10.3390/biom11060792

Highly Conserved C-Terminal Region of Indian Hedgehog N-Fragment Contributes to Its Auto-Processing and Multimer Formation
Cited by: 0
Author(s): Xiaoqing Wang, Hao Líu, Yanfang Liu, Gefei Han, Yushu Wang, Haifeng Chen, Lin He, Gang Ma
Software Mentions: 1
Published: about 5 years ago

10.3390/biom11030421

Beneficial Impacts of Incorporating the Non-Natural Amino Acid Azulenyl-Alanine into the Trp-Rich Antimicrobial Peptide buCATHL4B
Cited by: 7
Author(s): Areetha D’Souza, Matthew R. Necelis, Alona Kulesha, Gregory A. Caputo, Olga V. Makhlynets
Software Mentions: 1
Published: over 5 years ago

10.3390/biom10040623

Physicochemical Characterisation of KEIF—The Intrinsically Disordered N-Terminal Region of Magnesium Transporter A
Cited by: 5
Author(s): Stéphanie Jephthah, Linda K. Månsson, Domagoj Belić, J. Preben Morth, Marie Skepö
Software Mentions: 1
Published: about 6 years ago

10.3390/biom11091299

Structural Changes in the Cap of Rv0183/mtbMGL Modulate the Shape of the Binding Pocket
Cited by: 2
Author(s): Christoph Grininger, Mario Leypold, P. Aschauer, Tea Pavkov‐Keller, Lina Riegler-Berket, Rolf Breinbauer, Monika Oberer
Software Mentions: 1
Published: almost 5 years ago

10.3390/biom9090498

Computationally Designed Peptides for Zika Virus Detection: An Incremental Construction Approach
Cited by: 8
Author(s): Marcello Mascini, Emre Dikici, Marta Robles Mañueco, Julio A. Perez-Erviti, Sapna K. Deo, Darío Compagnone, Joseph Wang, José M. Pingarrón, Sylvia Daunert
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12934-021-01578-3

Engineering the acyltransferase domain of epothilone polyketide synthase to alter the substrate specificity
Cited by: 10
Author(s): Huimin Wang, Junheng Liang, Qianwen Yue, Long Li, Yan Shi, Guosong Chen, Yuezhong Li, Xiaoying Bian, Youming Zhang, Guoping Zhao, Xiaoming Ding
Software Mentions: 1
Published: about 5 years ago

10.1186/s12934-017-0737-2

Structure and application of antifreeze proteins from Antarctic bacteria
Cited by: 62
Author(s): Patricio A. Muñoz, Sebastián Márquez, Fernando González‐Nilo, Valeria Márquez-Miranda, Jenny M. Blamey
Software Mentions: 1
Published: almost 9 years ago

10.1186/1475-2859-9-34

Isolation of an Escherichia coli K4 kfoC mutant over-producing capsular chondroitin
Cited by: 35
Author(s): Anna Zanfardino, Odile Francesca Restaino, Eugenio Notomista, Donatella Cimini, Chiara Schiraldi, Mario De Rosa, Maurilio De Felice, Mario Varcamonti
Software Mentions: 1
Published: about 16 years ago

10.1186/1475-2859-11-118

A dual tag system for facilitated detection of surface expressed proteins in Escherichia coli
Cited by: 18
Author(s): Johan Jarmander, Martin Gustavsson, Thi Huyen, Patrik Samuelson, Gen Larsson
Software Mentions: 1
Published: almost 14 years ago

10.1186/s12934-018-1024-6

Characterization of a novel N-acylhomoserine lactonase, AidP, from Antarctic Planococcus sp.
Cited by: 18
Author(s): Wah-Seng See-Too, Peter Convey, David A. Pearce, Kok‐Gan Chan
Software Mentions: 1
Published: over 7 years ago

10.1186/s12934-018-0895-x

Use of chitin and chitosan to produce new chitooligosaccharides by chitinase Chit42: enzymatic activity and structural basis of protein specificity
Cited by: 55
Author(s): Peter Elias Kidibule, Paloma Santos‐Moriano, Elena Jiménez-Ortega, M. Ramirez-Escudero, M. Carmen Limón, Miguel Remacha, Francisco J. Plou, Julia Sanz‐Aparicio, María Fernández‐Lobato
Software Mentions: 1
Published: over 8 years ago

10.1099/mgen.0.000253

Sucrose 6F-phosphate phosphorylase: a novel insight in the human gut microbiome
Cited by: 11
Author(s): Alexandra Tauzin, Laëtitia Bruel, Élisabeth Laville, Cendrine Nicoletti, David Navarro, Bernard Henrissat, Josette Perrier, Gabrielle Potocki-Véronèse, Thierry Giardina, Mickaël Lafond
Software Mentions: 1
Published: over 7 years ago

10.1186/2042-5783-1-12

Prediction of a novel RNA binding domain in crocodilepox Zimbabwe Gene 157
Cited by: 1
Author(s): Nicole S. Little, Taylor T. H. Quon, Chris Upton
Software Mentions: 1
Published: over 14 years ago

10.1002/mbo3.210

O serotype‐independent susceptibility of <i>Pseudomonas aeruginosa</i> to lectin‐like pyocins
Cited by: 17
Author(s): Maarten G. K. Ghequire, Jozef Dingemans, Jean‐Paul Pirnay, Daniël De Vos, Pierre Cornélis, René De Mot
Software Mentions: 1
Published: almost 12 years ago

10.1002/mbo3.339

Identification and functional analysis of a bacteriocin, pyocin S6, with ribonuclease activity from a <i>Pseudomonas aeruginosa</i> cystic fibrosis clinical isolate
Cited by: 27
Author(s): Jozef Dingemans, Maarten G. K. Ghequire, M. Craggs, René De Mot, Pierre Cornélis
Software Mentions: 1
Published: over 10 years ago

10.1002/mbo3.306

Molecular insights into the enzymatic diversity of flavin‐trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm
Cited by: 22
Author(s): Ranjit K. Deka, Chad A. Brautigam, Wei Z. Liu, Diana R. Tomchick, Michael V. Norgard
Software Mentions: 1
Published: over 10 years ago

10.1002/mbo3.346

The HigB/HigA toxin/antitoxin system of <i>Pseudomonas aeruginosa</i> influences the virulence factors pyochelin, pyocyanin, and biofilm formation
Cited by: 79
Author(s): Thomas K. Wood, Thomas K. Wood
Software Mentions: 1
Published: over 10 years ago

10.1002/mbo3.243

Molecular basis for the recognition of cyclic‐di‐ <scp>AMP</scp> by PstA, a P _II ‐like signal transduction protein
Cited by: 38
Author(s): Philip Young-Ill Choi, Kamakshi Sureka, Joshua J. Woodward, Liang Tong
Software Mentions: 1
Published: over 11 years ago

10.1002/mbo3.366

Biochemical characterization of essential cell division proteins FtsX and FtsE that mediate peptidoglycan hydrolysis by PcsB in <i>Streptococcus pneumoniae</i>
Cited by: 19
Author(s): Ruchika Bajaj, Kevin E. Bruce, Amy L. Davidson, Britta E. Rued, Cynthia V. Stauffacher, Malcolm E. Winkler
Software Mentions: 1
Published: about 10 years ago

10.3390/microorganisms8101594

Understanding High-Salt and Cold Adaptation of a Polyextremophilic Enzyme
Cited by: 24
Author(s): Ram Karan, Sam Mathew, Reyhan Muhammad, Didier B. Bautista, Malvina M. Vogler, Jörg Eppinger, Romina Oliva, Luigi Cavallo, Stefan T. Arold, Magnus Rueping
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8101610

Detailed Molecular Interactions of Favipiravir with SARS-CoV-2, SARS-CoV, MERS-CoV, and Influenza Virus Polymerases In Silico
Cited by: 26
Author(s): Mitsuru Sada, Takeshi Saraya, Haruyuki Ishii, Kaori Okayama, Yuriko Hayashi, Takeshi Tsugawa, Atsuyoshi Nishina, Koichi Murakami, Makoto Kuroda, Akihide Ryo, Hirokazu Kimura
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms9040837

Structural Insights into the Methane-Generating Enzyme from a Methoxydotrophic Methanogen Reveal a Restrained Gallery of Post-Translational Modifications
Cited by: 9
Author(s): Julia M. Kurth, Marie-Caroline Müller, Cornelia U. Welte, T. Wagner
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms8050703

Strigolactone Analogs Are Promising Antiviral Agents for the Treatment of Human Cytomegalovirus Infection
Cited by: 6
Author(s): Matteo Biolatti, Marco Blangetti, Giulia D’Arrigo, Francesca Spyrakis, Paola Cappello, Camilla Albano, Paolo Ravanini, Santo Landolfo, Marco De Andrea, Cristina Prandi, Valentina Dell’Oste
Software Mentions: 1
Published: about 6 years ago

10.3390/microorganisms8081250

Progress in Developing Inhibitors of SARS-CoV-2 3C-Like Protease
Cited by: 81
Author(s): Qingxin Li, CongBao Kang
Software Mentions: 1
Published: almost 6 years ago

10.3390/microorganisms9091936

Gene Analysis, Cloning, and Heterologous Expression of Protease from a Micromycete Aspergillus ochraceus Capable of Activating Protein C of Blood Plasma
Cited by: 1
Author(s): С. К. Комаревцев, Peter Evseev, Mikhail M. Shneider, Е. А. Попова, Alexey E. Tupikin, В. Н. Степаненко, Мarsel R. Kabilov, С. В. Шабунин, A. A. Osmolovskiy, Konstantin A. Miroshnikov
Software Mentions: 1
Published: almost 5 years ago

10.3390/microorganisms8010059

Novel Sequence Feature of SecA Translocase Protein Unique to the Thermophilic Bacteria: Bioinformatics Analyses to Investigate Their Potential Roles
Cited by: 3
Author(s): Bijendra Khadka, Dhillon Persaud, Radhey S. Gupta
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms9020293

Crossing the Wall: Characterization of the Multiheme Cytochromes Involved in the Extracellular Electron Transfer Pathway of Thermincola ferriacetica
Cited by: 11
Author(s): M. Faustino, Bruno M. Fonseca, Nazua L. Costa, Diana Lousa, Ricardo O. Louro, Catarina M. Paquete
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms9051109

Amino Acid Residues Involved in Inhibition of Host Gene Expression by Influenza A/Brevig Mission/1/1918 PA-X
Cited by: 2
Author(s): Kevin Chiem, Luis Martinez‐Sobrido, Aitor Nogales, Marta L. DeDiego
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9061300

Pathogen Moonlighting Proteins: From Ancestral Key Metabolic Enzymes to Virulence Factors
Cited by: 11
Author(s): Luís Franco-Serrano, David Sánchez-Redondo, Araceli Nájar-García, Sergio Hernández, Isaac Amela, Josep A. Pérez-Pons, Jaume Piñol, Angel Mozo-Villarías, Juan Cedano, Enrique Querol
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9010192

Identification of an Acidic Amino Acid Permease Involved in d-Aspartate Uptake in the Yeast Cryptococcus humicola
Cited by: 2
Author(s): Daiki Imanishi, Yoshio Kera, Shouji Takahashi
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms7110515

Functional Characterization and Structural Analysis of NADH Oxidase Mutants from Thermus thermophilus HB27: Role of Residues 166, 174, and 194 in the Catalytic Properties and Thermostability
Cited by: 2
Author(s): Javier Rocha-Martín, Pedro A. Sánchez‐Murcia, Fernando López‐Gallego, Aurélio Hidalgo, José Berenguer
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms9081645

Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module
Cited by: 4
Author(s): Tilman Schirmer, Tjaart de Beer, Stefanie Tamegger, Alexander Harms, Nikolaus Dietz, David M. Dranow, Thomas E. Edwards, Peter J. Myler, Isabelle Phan, Christoph Dehio
Software Mentions: 1
Published: almost 5 years ago

10.17912/micropub.biology.000322

A mutation that alters the 255th glutamate to lysine in RSKS-1/S6 kinase reliably extends the lifespan of C. elegans.
Cited by: 0
Author(s): Jae Hyun Lee, Sieun S. Kim, Seung-Jae Lee
Software Mentions: 1
Published: over 5 years ago

10.1080/23802359.2019.1633963

Mitochondrial DNA analyses found five novel mutations in idiopathic epilepsy patients
Cited by: 0
Author(s): Cuiping You, Rui Tao, Qiang Su, Yucheng Lu, Long Wang, Shu Liu, Lifen Wang, Limin Wang, Fuzhong Xue, Fengyuan Che
Software Mentions: 1
Published: about 7 years ago

10.1186/s13100-021-00240-4

The unusual structure of the PiggyMac cysteine-rich domain reveals zinc finger diversity in PiggyBac-related transposases
Cited by: 5
Author(s): Marc Guérineau, Luíza Mamigonian Bessa, Séverine Moriau, Ewen Lescop, François Bontems, Nathalie Mathy, E. Guittet, Julien Bischerour, Mireille Bétermier, Nelly Morellet
Software Mentions: 1
Published: about 5 years ago

10.1038/s41379-019-0372-z

Mapping the binding sites of antibodies utilized in programmed cell death ligand-1 predictive immunohistochemical assays for use with immuno-oncology therapies
Cited by: 56
Author(s): Nicola Lawson, Carly I Dix, Paul Scorer, Christopher J. Stubbs, Edmond Wong, Liam Hutchinson, Eileen McCall, M. Schimpl, Emma DeVries, Jill Walker, Gareth Williams, James Hunt, Craig Barker
Software Mentions: 1
Published: over 6 years ago

10.1016/j.mam.2012.12.009

The ABCs of membrane transporters in health and disease (SLC series): Introduction
Cited by: 457
Author(s): Matthias A. Hediger, Benjamin Clémençon, Robert E. Burrier, Elspeth A. Bruford
Software Mentions: 1
Published: over 13 years ago

10.1186/s13229-019-0286-0

Disruption of PHF21A causes syndromic intellectual disability with craniofacial anomalies, epilepsy, hypotonia, and neurobehavioral problems including autism
Cited by: 26
Author(s): Hyung Goo Kim, Jill A. Rosenfeld, Daryl A. Scott, Gerard Bénédicte, Jonathan D J Labonne, Juliette Brown, Marianne McGuire, Sonal Mahida, Sakkubai Naidu, Jacqueline Gutierrez, Gaëtan Lesca, Vincent Des Portes, Ange Line Bruel, Arthur Sorlin, Fan Xia, Yline Capri, Eric A. Muller, Dianalee McKnight, Erin Torti, Franz Rüschendorf, Oliver Hummel, Zeyaul Islam, Prasanna R. Kolatkar, Lawrence C. Layman, Dongseok Ryu, Il Keun Kong, Suneeta Madan‐Khetarpal, Cheol-Hee Kim
Software Mentions: 1
Published: over 6 years ago

10.1016/j.molbiopara.2009.12.011

Structure of Trypanosoma brucei glutathione synthetase: Domain and loop alterations in the catalytic cycle of a highly conserved enzyme
Cited by: 13
Author(s): Paul K. Fyfe, M.S. Alphey, William N. Hunter
Software Mentions: 1
Published: over 16 years ago

10.1093/molbev/msw061

Are There Rab GTPases in Archaea?
Cited by: 22
Author(s): Jarosław Surkont, José B. Pereira-Leal
Software Mentions: 1
Published: over 10 years ago

10.1093/molbev/msy094

Demographic History and Genetic Adaptation in the Himalayan Region Inferred from Genome-Wide SNP Genotypes of 49 Populations
Cited by: 34
Author(s): Elena Arciero, Thirsa Kraaijenbrink, Asan, Marc Haber, Massimo Mezzavilla, Qasim Ayub, Wei Wang, Zhaxi Pingcuo, Huanming Yang, Jian Wang, Mark A. Jobling, George van Driem, Yali Xue, Peter de Knijff, Chris Tyler‐Smith
Software Mentions: 1
Published: about 8 years ago

10.1186/s43556-020-00001-4

Structural characterization of the C-terminal domain of SARS-CoV-2 nucleocapsid protein
Cited by: 67
Author(s): Renjie Zhou, Rui Zeng, Albrecht von Brunn, Jian Lei
Software Mentions: 1
Published: almost 6 years ago