Projects: pypi: PyMOL

https://packages.ecosyste.ms/registries/pypi.org/packages/PyMOL


1 version
Latest release: about 2 years ago
5 dependent packages

Science Score: 90/100
Starting Score: 100 points
Bonuses:
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem

Very Likely Science (90)

Papers Mentioning PyMOL 8,266

10.3390/md15100318
Identification and Characterization of an Isoform Antifreeze Protein from the Antarctic Marine Diatom, Chaetoceros neogracile and Suggestion of the Core Region
Cited by: 8
Author(s): Minjae Kim, Yunho Gwak, Woo‐Sik Jung, EonSeon Jin
Software Mentions: 1
Published: about 8 years ago
10.3390/md12010214
First Report of a Peroxiredoxin Homologue in Jellyfish: Molecular Cloning, Expression and Functional Characterization of CcPrx4 from Cyanea capillata
Cited by: 17
Author(s): Zengliang Ruan, Guoyan Liu, Beilei Wang, Yonghong Zhou, Jia Lu, Qianqian Wang, Jie Zhao, Liming Zhang
Software Mentions: 1
Published: almost 12 years ago
10.3390/md12063091
Marine and Semi-Synthetic Hydroxysteroids as New Scaffolds for Pregnane X Receptor Modulation
Cited by: 12
Author(s): Valentina Sepe, Francesco Saverio Di Leva, Claudio D’Amore, Carmen Festa, Simona De Marino, Barbara Renga, Maria Valeria D’Auria, Ettore Novellino, Vittorio Limongelli, Lisette D’Souza, Mahesh S. Majik, Angela Zampella, Stefano Fiorucci
Software Mentions: 1
Published: over 11 years ago
10.3390/md16120518
Synergistic AML Cell Death Induction by Marine Cytotoxin (+)-1(R), 6(S), 1’(R), 6’(S), 11(R), 17(S)-Fistularin-3 and Bcl-2 Inhibitor Venetoclax
Cited by: 14
Author(s): Cristina Florean, Kyung Rok Kim, Michaël Schnekenburger, Hyun-Jung Kim, Céline Moriou, Cécile Debitus, Mario Dicato, Ali Al‐Mourabit, Byung Woo Han, Marc Diederich
Software Mentions: 1
Published: almost 7 years ago
10.3390/md17030142
d-Amino Acid Substitution of α-Conotoxin RgIA Identifies its Critical Residues and Improves the Enzymatic Stability
Cited by: 19
Author(s): Jie Ren, Xiaopeng Zhu, Pan Xu, Rui Li, Ying Fu, Shuai Dong, Dongting Zhangsun, Yong Wu, Sulan Luo
Software Mentions: 1
Published: over 6 years ago
10.3390/md16100359
A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178
Cited by: 8
Author(s): Yatong Wang, Yanhua Hou, Yifan Wang, Lu Zheng, Xianlei Xu, Kang Cheng Pan, Rongqi Li, Quanfu Wang
Software Mentions: 1
Published: about 7 years ago
10.3390/md19010012
Preparation, COX-2 Inhibition and Anticancer Activity of Sclerotiorin Derivatives
Cited by: 12
Author(s): Tao Chen, Yucong Huang, Junxian Hong, Xikang Wei, Fang Zeng, Jialin Li, Geting Ye, Jie Yuan, Yuhua Long
Software Mentions: 1
Published: almost 5 years ago
10.3390/md17060323
Biochemical Characterization and Elucidation of Action Pattern of a Novel Polysaccharide Lyase 6 Family Alginate Lyase from Marine Bacterium Flammeovirga sp. NJ-04
Cited by: 18
Author(s): Qian Li, Fu Hu, Benwei Zhu, Yun Sun, Zhong Yao
Software Mentions: 1
Published: over 6 years ago
10.3390/md17030147
Cold-Adapted Glutathione S-Transferases from Antarctic Psychrophilic Bacterium Halomonas sp. ANT108: Heterologous Expression, Characterization, and Oxidative Resistance
Cited by: 19
Author(s): Yanhua Hou, Chenhui Qiao, Yifan Wang, Yatong Wang, Xiulian Ren, Qifeng Wei, Quanfu Wang
Software Mentions: 1
Published: over 6 years ago
10.3390/md18080417
Antimicrobial Peptide TP4 Targets Mitochondrial Adenine Nucleotide Translocator 2
Cited by: 7
Author(s): Bor Chyuan Su, Yi‐Chung Liu, Chen-Hung Ting, Ping Lyu, Jyh-Yih Chen
Software Mentions: 1
Published: over 5 years ago
10.3390/md18120603
Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro
Cited by: 19
Author(s): Sung-Kun Yim, Kian Kim, Sang-Ho Chun, TaeHawn Oh, Woo-Huk Jung, Kyungsook Jung, Chul‐Ho Yun
Software Mentions: 1
Published: almost 5 years ago
10.3390/md18120637
Identification and Characterization of a New Type III Polyketide Synthase from a Marine Yeast, Naganishia uzbekistanensis
Cited by: 3
Author(s): Laure Martinelli, Vanessa Rédou, Bastien Cochereau, Ludovic Delage, Nolwenn Hymery, Elisabeth Poirier, Christophe Le Meur, Gaetan Le Foch, Lionel Cladière, Mohamed Mehiri, Nathalie Demont-Caulet, Laurence Meslet‐Cladière
Software Mentions: 1
Published: almost 5 years ago
10.3390/md18010013
Characterization of Nme5-Like Gene/Protein from the Red Alga Chondrus Crispus
Cited by: 5
Author(s): Dragutin Perina, Marina Korolija, Andreja Mikoč, Mirna Halasz, Maja Herak Bosnar, Helena Ćetković
Software Mentions: 1
Published: almost 6 years ago
10.3390/md17090512
Worms’ Antimicrobial Peptides
Cited by: 18
Author(s): Rosa‐Maria Bruno, Marc Maresca, Stéphane Canaan, Jean‐François Cavalier, Kamel Mabrouk, Céline Boidin-Wichlacz, Hamza Olleik, Daniela Zeppilli, Priscille Brodin, François Massol, Didier Jollivet, Sascha Jung, Aurélie Tasiemski
Software Mentions: 1
Published: about 6 years ago
10.3390/md19020067
An In-Silico Comparative Study of Lipases from the Antarctic Psychrophilic Ciliate Euplotes focardii and the Mesophilic Congeneric Species Euplotes crassus: Insight into Molecular Cold-Adaptation
Cited by: 10
Author(s): Guang Yang, Matteo Mozzicafreddo, Patrizia Ballarini, Sandra Pucciarelli, Cristina Miceli
Software Mentions: 1
Published: almost 5 years ago
10.3390/ma14123217
Peptides and Peptidomimetics as Inhibitors of Enzymes Involved in Fibrillar Collagen Degradation
Cited by: 3
Author(s): Patrycja Ledwoń, Anna Maria Papini, Paolo Rovero, Rafał Latajka
Software Mentions: 1
Published: over 4 years ago
10.3390/ma14154156
Design, Synthesis, and In Vitro Antiproliferative Activity of Hydantoin and Purine Derivatives with the 4-Acetylphenylpiperazinylalkyl Moiety
Cited by: 1
Author(s): Agnieszka Zagórska, Anna Czopek, Anna Jaromin, Magdalena Mielczarek-Puta, Marta Struga, Dorota Stary, Marek Bajda
Software Mentions: 1
Published: over 4 years ago
10.1039/c9md00183b
Aminopyrimidine–galactose hybrids are highly selective galectin-3 inhibitors
Cited by: 17
Author(s): Alexander Dahlqvist, Fredrik Zetterberg, Hakon Leffler, Ulf J. Nilsson
Software Mentions: 1
Published: almost 7 years ago
10.1155/2014/757123
C-Reactive Protein and Coronary Heart Disease: All Said—Is Not It?
Cited by: 52
Author(s): Frederik Strang, Heribert Schunkert
Software Mentions: 1
Published: almost 12 years ago
10.1155/2021/9954909
Inverse Agonist of Retinoid-Related Orphan Receptor-Alpha Prevents Apoptosis and Degeneration in Nucleus Pulposus Cells via Upregulation of YAP
Cited by: 5
Author(s): Tongzhou Liang, Jincheng Qiu, Shaoguang Li, Zhihuai Deng, Xianjian Qiu, Wenjun Hu, Pengfei Li, Taiqiu Chen, Zhancheng Liang, Hang Zhou, Bo Gao, Dongsheng Huang, Anjing Liang, Wenjie Gao
Software Mentions: 1
Published: over 4 years ago
10.1155/2017/9605894
Toll-Like Receptor 4 Signalling and Its Impact on Platelet Function, Thrombosis, and Haemostasis
Cited by: 67
Author(s): Thomas M. Vallance, Marie‐Theres Zeuner, Harry F. Williams, Darius Widera, Sakthivel Vaiyapuri
Software Mentions: 1
Published: almost 9 years ago
10.3390/medicina55050193
Group-1 Grass Pollen Allergens with Near-Identical Sequences Identified in Species of Subtropical Grasses Commonly Found in Southeast Asia
Cited by: 3
Author(s): Sirirat Aud-In, Koravit Somkid, Wisuwat Songnuan
Software Mentions: 1
Published: over 6 years ago
10.1007/s00430-020-00675-1
Single-nucleotide variants in human CD81 influence hepatitis C virus infection of hepatoma cells
Cited by: 6
Author(s): María Pía Alberione, Rebecca Moeller, Jared Kirui, Corinne Ginkel, Mandy Doepke, L.J. Stroh, Jan‐Philipp Machtens, Thomas Pietschmann, Gisa Gerold
Software Mentions: 1
Published: over 5 years ago
10.1002/med.21597
Lipoprotein‐associated phospholipase A2: The story continues
Cited by: 80
Author(s): Fubao Huang, Kai Wang, Jianhua Shen
Software Mentions: 1
Published: over 6 years ago
10.3390/membranes11010017
The Influence of the Mixed DPC:SDS Micelle on the Structure and Oligomerization Process of the Human Cystatin C
Cited by: 1
Author(s): Przemysław Jurczak, Emilia Sikorska, Paulina Czaplewska, Sylwia Rodziewicz‐Motowidło, Igor Zhukov, Aneta Szymańska
Software Mentions: 1
Published: almost 5 years ago
10.3390/membranes11060449
A Study of the Interaction of a New Benzimidazole Schiff Base with Synthetic and Simulated Membrane Models of Bacterial and Mammalian Membranes
Cited by: 5
Author(s): Alberto Aragón-Muriel, Yamil Liscano, David Morales‐Morales, Dorian Polo‐Ceron, José Oñate-Garzón
Software Mentions: 1
Published: over 4 years ago
10.3390/membranes10110357
Interaction between the Lentil Lipid Transfer Protein Lc-LTP2 and Its Novel Signal Ligand PI(4,5)P2
Cited by: 5
Author(s): Daria N. Melnikova, Ivan V. Bogdanov, Tatiana V. Ovchinnikova, Ekaterina I. Finkina
Software Mentions: 1
Published: almost 5 years ago
10.3390/membranes11080602
Rush Hour of LATs towards Their Transport Cycle
Cited by: 6
Author(s): Adrià Nicolàs-Aragó, Joana Fort, Manuel Palacı́n, Ekaitz Errasti-Murugarren
Software Mentions: 1
Published: over 4 years ago
10.1590/0074-02760160417
Insights into cytochrome bc1 complex binding mode of antimalarial 2-hydroxy-1,4-naphthoquinones through molecular modelling
Cited by: 14
Author(s): Ana Carolina Rennó Sodero, Bárbara Abrahim-Vieira, Pedro Tôrres, Pedro Geraldo Pascutti, Célia Regina da Silva Garcia, Vı́tor F. Ferreira, David R. da Rocha, Sabrina Baptista Ferreira, Floriano Paes Silva
Software Mentions: 1
Published: over 8 years ago
10.3390/metabo11030190
The Interaction of the Flavonoid Fisetin with Human Glutathione Transferase A1-1
Cited by: 4
Author(s): Mohammed H. Alqarni, Ahmed I. Foudah, Magdy Mohamed Muharram, Nikolaos E. Labrou
Software Mentions: 1
Published: over 4 years ago
10.1016/j.mgene.2015.04.001
Structural and functional analyses of Barth syndrome-causing mutations and alternative splicing in the tafazzin acyltransferase domain
Cited by: 15
Author(s): Atsushi Hijikata, Kei Yura, Osamu Ohara, Mitiko Ḡo
Software Mentions: 1
Published: over 10 years ago
10.1111/1751-7915.12300
Enhancement of the catalytic efficiency and thermostability of <scp> <i>S</i> </scp> <i>tenotrophomonas</i> sp. keratinase <scp>KerSMD</scp> by domain exchange with <scp>KerSMF</scp>
Cited by: 38
Author(s): Zhen Fang, Juan Zhang, Baihong Liu, Guocheng Du, Jian Chen
Software Mentions: 1
Published: about 10 years ago
10.15698/mic2018.07.640
Antagonism between salicylate and the cAMP signal controls yeast cell survival and growth recovery from quiescence
Cited by: 5
Author(s): Maurizio D. Baroni, Sonia Colombo, Enzo Martegani
Software Mentions: 1
Published: over 7 years ago
10.1186/s12934-017-0658-0
Enzymatic improvement of mitochondrial thiol oxidase Erv1 for oxidized glutathione fermentation by Saccharomyces cerevisiae
Cited by: 4
Author(s): Jyumpei Kobayashi, Daisuke Sasaki, Kiyotaka Y. Hara, Tomohisa Hasunuma, Akihiko Kondo
Software Mentions: 1
Published: over 8 years ago
10.1186/s12934-017-0841-3
Rational modification of substrate binding site by structure-based engineering of a cellobiose 2-epimerase in Caldicellulosiruptor saccharolyticus
Cited by: 21
Author(s): Ah-Reum Park, Jin-Sook Kim, Seung-Won Jang, Young-Gyun Park, Bong‐Seong Koo, Hyeon-Cheol Lee
Software Mentions: 1
Published: almost 8 years ago
10.1186/1475-2859-11-151
Rationally re-designed mutation of NAD-independent l-lactate dehydrogenase: high optical resolution of racemic mandelic acid by the engineered Escherichia coli
Cited by: 17
Author(s): Tianyi Jiang, Chao Gao, Peipei Dou, Cuiqing Ma, Jing Kong, Ping Xu
Software Mentions: 1
Published: almost 13 years ago
10.1186/s12934-019-1270-2
Soluble versions of outer membrane cytochromes function as exporters for heterologously produced cargo proteins
Cited by: 1
Author(s): Helge M. Dietrich, Miriam Edel, Thea Bursac, Manfred J. Meier, Katrin Sturm-Richter, Johannes Gescher
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12934-020-1291-x
Redesign and reconstruction of a steviol-biosynthetic pathway for enhanced production of steviol in Escherichia coli
Cited by: 41
Author(s): Jun Ho Moon, Kunjoong Lee, Jun Ho Lee, Pyung Cheon Lee
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12934-015-0227-3
Improved cell surface display of Salmonella enterica serovar Enteritidis antigens in Escherichia coli
Cited by: 10
Author(s): Martin Gustavsson, Thi Huyen, Petra Lüthje, Tran Bao Ngoc, Annelie Brauner, Patrik Samuelson, Nam Hai Truong, Gen Larsson
Software Mentions: 1
Published: over 10 years ago
10.1186/s12934-020-01501-2
Construction and characterization of a novel glucose dehydrogenase-leucine dehydrogenase fusion enzyme for the biosynthesis of l-tert-leucine
Cited by: 3
Author(s): Liping Liao, Yonghui Zhang, Yali Wang, Yousi Fu, Aihui Zhang, Ruodian Qiu, Shuhao Yang, Baishan Fang
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12934-018-0864-4
Two novel deep-sea sediment metagenome-derived esterases: residue 199 is the determinant of substrate specificity and preference
Cited by: 18
Author(s): Ying‐Yi Huo, Shu-Ling Jian, Hong Cheng, Zhen Rong, Heng‐Lin Cui, Xue-Wei Xu
Software Mentions: 1
Published: almost 8 years ago
10.1186/s12934-020-01451-9
Improved thermostability of creatinase from Alcaligenes Faecalis through non-biased phylogenetic consensus-guided mutagenesis
Cited by: 10
Author(s): Xue Bai, Daixi Li, Fuqiang Ma, Xiaotie Deng, Manjie Luo, Yue Feng, Guangyu Yang
Software Mentions: 1
Published: about 5 years ago
10.1186/s12934-021-01571-w
Biochemical and synergistic properties of a novel alpha‐amylase from Chinese nong‐flavor Daqu
Cited by: 7
Author(s): Lanchai Chen, Zhuolin Yi, Yang Fang, Yanling Jin, Kai He, Yao Xiao, Dong Zhao, Huibo Luo, Hui He, Qun Sun, Hai Zhao
Software Mentions: 1
Published: over 4 years ago
10.1186/s12934-019-1252-4
Substantially improving the enantioconvergence of PvEH1, a Phaseolus vulgaris epoxide hydrolase, towards m-chlorostyrene oxide by laboratory evolution
Cited by: 5
Author(s): Xun-Cheng Zong, Chuang Li, Yaohui Xu, Die Hu, Bo-Chun Hu, Zhiyuan Jia
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12934-020-01399-w
Expression, homology modeling and enzymatic characterization of a new β-mannanase belonging to glycoside hydrolase family 1 from Enterobacter aerogenes B19
Cited by: 7
Author(s): Siyu Liu, Tong Cui, Yan Song
Software Mentions: 1
Published: over 5 years ago
10.1186/s12934-017-0657-1
Functional differentiation of 3-ketosteroid Δ1-dehydrogenase isozymes in Rhodococcus ruber strain Chol-4
Cited by: 26
Author(s): Govinda Guevara, Laura Fernández de las Heras, Julián Perera, Juana María Navarro Lloréns
Software Mentions: 1
Published: over 8 years ago
10.1186/s12934-021-01538-x
Bacillus aryabhattai TFG5-mediated synthesis of humic substances from coir pith wastes
Cited by: 4
Author(s): Iniya Kumar Muniraj, Shameer Syed, R. Priyadharshini, Sivakumar Uthandi
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules21070824
Activating and Attenuating the Amicoumacin Antibiotics
Cited by: 43
Author(s): Hyun Bong Park, Corey E Perez, Elena K. Perry, Jason M. Crawford
Software Mentions: 1
Published: over 9 years ago
10.3390/molecules26082195
Beneficial Effects of Cyclic Ether 2-Butoxytetrahydrofuran from Sea Cucumber Holothuria scabra against Aβ Aggregate Toxicity in Transgenic Caenorhabditis elegans and Potential Chemical Interaction
Cited by: 9
Author(s): Taweesak Tangrodchanapong, Nilubon Sornkaew, Laphatrada Yurasakpong, Nakorn Niamnont, Chanin Nantasenamat, Prasert Sobhon, Krai Meemon
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules23123135
Bioactivity-Guided Separation of Potential D2 Dopamine Receptor Antagonists from Aurantii Fructus based on Molecular Docking Combined with High-Speed Counter-Current Chromatography
Cited by: 9
Author(s): Yun He, Shihao Zhu, Changqiao Wu, Ying Lü, Qi Tang
Software Mentions: 1
Published: almost 7 years ago
10.3390/molecules23102607
Aminobenzosuberone Scaffold as a Modular Chemical Tool for the Inhibition of Therapeutically Relevant M1 Aminopeptidases
Cited by: 8
Author(s): Emmanuel Salomon, Marjorie Schmitt, Anil Kumar Marapaka, Athanasios Stamogiannos, Germain Revelant, Carine Schmitt, Sarah Alavi, Isabelle Florent, A. Addlagatta, Efstratios Stratikos, Céline Tarnus, Sébastien Albrecht
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules26103032
Effect of Sodium Valproate on the Conformational Stability of the Visual G Protein-Coupled Receptor Rhodopsin
Cited by: 1
Author(s): Neda Razzaghi, Pol Fernandez-Gonzalez, Aina Mas-Sanchez, Guillem Vila-Julià, Juan J. Pérez, Pere Garriga
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules20046319
Insights into the Antimicrobial Properties of Hepcidins: Advantages and Drawbacks as Potential Therapeutic Agents
Cited by: 46
Author(s): Lisa Lombardi, Giuseppantonio Maisetta, Giovanna Batoni, Arianna Tavanti
Software Mentions: 1
Published: over 10 years ago
10.3390/molecules23081959
Truly Target-Focused Pharmacophore Modeling: A Novel Tool for Mapping Intermolecular Surfaces
Cited by: 30
Author(s): Jérémie Mortier, Pratik Dhakal, Andrea Volkamer
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules24040810
Selective Inhibition of Human Monoamine Oxidase B by Acacetin 7-Methyl Ether Isolated from Turnera diffusa (Damiana)
Cited by: 33
Author(s): Narayan D. Chaurasiya, Jianping Zhao, Pankaj Pandey, Robert J. Doerksen, Ilias Muhammad, Babu L. Tekwani
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules23040785
Comparative Evaluation of the Antioxidant and Anti-Alzheimer’s Disease Potential of Coumestrol and Puerarol Isolated from Pueraria lobata Using Molecular Modeling Studies
Cited by: 12
Author(s): Prashamsa Koirala, Su Hui Seong, Hyun Ah Jung, Jae Sue Choi
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules26020475
Molecular Docking Suggests the Targets of Anti-Mycobacterial Natural Products
Cited by: 17
Author(s): Rafael Baptista, Sumana Bhowmick, Jianying Shen, Luis A. J. Mur
Software Mentions: 1
Published: almost 5 years ago
10.3390/molecules23020249
Interaction between Saikosaponin D, Paeoniflorin, and Human Serum Albumin
Cited by: 13
Author(s): Guo-Wu Liang, Yicun Chen, Yi Wang, Hongmei Wang, Xiangyu Pan, Peihong Chen, Qing-Xia Niu
Software Mentions: 1
Published: almost 8 years ago
10.3390/molecules25092163
Discovery of Novel Imidazopyridine GSK-3β Inhibitors Supported by Computational Approaches
Cited by: 9
Author(s): Rosa Buonfiglio, Federica Prati, Martina Bischetti, Claudia Cavarischia, Guido Furlotti, Rosella Ombrato
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules171011826
Inhibition of 11b-HSD1 by Tetracyclic Triterpenoids from Euphorbia kansui
Cited by: 16
Author(s): Jie Guo, Li Zhou, Hongping He, Ying Liu, Zhen Yang, Xiao‐Jiang Hao
Software Mentions: 1
Published: about 13 years ago
10.3390/molecules25235694
Encapsulation of Risperidone by Methylated β-Cyclodextrins: Physicochemical and Molecular Modeling Studies
Cited by: 9
Author(s): Laura Sbârcea, Ionuț-Mihai Tănase, Adriana Ledeţi, Denisa Cîrcioban, Gabriela Vlase, Paul Barvinschi, Marinela Miclău, Renata-Maria Văruţ, Cristina Trandafirescu, Ionuţ Ledeţi
Software Mentions: 1
Published: almost 5 years ago
10.3390/molecules25225285
Design, Synthesis and Biological Evaluation of (2′,5′ and 3′5′-Linked) cGAMP Analogs that Activate Stimulator of Interferon Genes (STING)
Cited by: 7
Author(s): Xin Xie, Junyi Liu, Xiaowei Wang
Software Mentions: 1
Published: about 5 years ago
10.3390/molecules22122048
Synthesis, Analysis, Cholinesterase-Inhibiting Activity and Molecular Modelling Studies of 3-(Dialkylamino)-2-hydroxypropyl 4-[(Alkoxy-carbonyl)amino]benzoates and Their Quaternary Ammonium Salts
Cited by: 8
Author(s): Tereza Padrtová, Pavlína Marvanová, Klára Odehnalová, Renáta Kubínová, Oscar Parravicini, Adriana Garro, Ricardo D. Enriz, Otakar Humpa, Michal Oravec, Petr Mokrý
Software Mentions: 1
Published: almost 8 years ago
10.3390/molecules26185606
Proteasomal Degradation of Zn-Dependent Hdacs: The E3-Ligases Implicated and the Designed Protacs That Enable Degradation
Cited by: 3
Author(s): Laura Márquez-Cantudo, Ana Ramos, Claire Coderch, Beatriz de Pascual‐Teresa
Software Mentions: 1
Published: about 4 years ago
10.3390/molecules25225405
In Silico Analysis and In Vitro Characterization of the Bioactive Profile of Three Novel Peptides Identified from 19 kDa α-Zein Sequences of Maize
Cited by: 13
Author(s): Jorge L. Díaz-Gómez, Ines Neundorf, Laura Margarita López-Castillo, Fabiola Castorena‐Torres, Sergio O. Serna‐Saldívar, Silverio García‐Lara
Software Mentions: 1
Published: almost 5 years ago
10.3390/molecules26154599
Betulin, a Newly Characterized Compound in Acacia auriculiformis Bark, Is a Multi-Target Protein Kinase Inhibitor
Cited by: 5
Author(s): AA Ahmadu, Claire Delehouzé, Anas Haruna, Lukman Mustapha, Bilqis A. Lawal, Aniefiok Udobre, Blandine Baratte, Camilla Triscornia, Axelle Autret, Robert Thomas, J. Chloë Bulinski, Morgane Rousselot, Mélanie Simoes Eugénio, Marie‐Thérèse Dimanche‐Boitrel, Jacobus P. Petzer, Lesetja J. Legoabe, Stéphane Bach
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules25153429
Antinociceptive and Cytotoxic Activity of Opioid Peptides with Hydrazone and Hydrazide Moieties at the C-Terminus
Cited by: 11
Author(s): Jolanta Dyniewicz, Piotr F. J. Lipiński, Piotr Kossoń, Marta Bochyńska-Czyż, Joanna Matalińska, Aleksandra Misicka
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules171112882
Solvent-Free Synthesis, DNA-Topoisomerase II Activity and Molecular Docking Study of New Asymmetrically N,N'-Substituted Ureas
Cited by: 8
Author(s): Andressa Esteves-Souza, Cláudio Eduardo Rodrigues-Santos, Catarina de Nigris Del Cistia, Daniel Rosa da Silva, Carlos Maurício R. Sant’Anna, Aurea Echevarrı́a
Software Mentions: 1
Published: about 13 years ago
10.3390/molecules24193489
Atroxlysin-III, A Metalloproteinase from the Venom of the Peruvian Pit Viper Snake Bothrops atrox (Jergón) Induces Glycoprotein VI Shedding and Impairs Platelet Function
Cited by: 11
Author(s): Luciana Souza de Oliveira, Maria Inácia Estevão-Costa, Valéria Gonçalves de Alvarenga, Dan Vivas-Ruiz, Armando Yarlequé, Augusto Martins Lima, Ana M. Cavaco, Johannes A. Eble, Eladio Flores Sánchez
Software Mentions: 1
Published: about 6 years ago
10.3390/molecules25204798
Topological Regulation of the Bioactive Conformation of a Disulfide-Rich Peptide, Heat-Stable Enterotoxin
Cited by: 5
Author(s): Shigeru Shimamoto, Mayu Fukutsuji, Toi Osumi, Masaya Goto, Hiroshi Toyoda, Yuji Hidaka
Software Mentions: 1
Published: about 5 years ago
10.3390/molecules24122331
Design, Synthesis and Biological Evaluation of 7-Chloro-9H-pyrimido[4,5-b]indole-based Glycogen Synthase Kinase-3β Inhibitors
Cited by: 10
Author(s): С. А. Андреев, Tatu Pantsar, Francesco Ansideri, Mark Kudolo, Michael Förster, Dieter Schollmeyer, Stefan Laufer, Pierre Koch
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules23061313
Molecular Docking of Potential Inhibitors of Broccoli Myrosinase
Cited by: 15
Author(s): Juan Román, Antonio del Castillo, Andrea Mahn
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules24193422
Design, Synthesis, and Biological Evaluation of Novel Thienopyrimidine Derivatives as PI3Kα Inhibitors
Cited by: 4
Author(s): Lide Yu, Qinqin Wang, Caolin Wang, Binliang Zhang, Zunhua Yang, Fang Yuan, Wufu Zhu, Pengwu Zheng
Software Mentions: 1
Published: about 6 years ago
10.3390/molecules26071816
In Vitro Study of the Fibrinolytic Activity via Single Chain Urokinase-Type Plasminogen Activator and Molecular Docking of FGFC1
Cited by: 7
Author(s): Chunli Gao, Quan Shen, Pengjie Tang, Yuling Cao, Hou‐Wen Lin, Bailin Li, Peng Sun, Bin Bao, Wenhui Wu
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules26092742
Computational Design of Novel Allosteric Inhibitors for Plasmodium falciparum DegP
Cited by: 5
Author(s): Sadaf Shehzad, Rajan Kumar Pandey, Pawan Malhotra, Dinesh Gupta
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules26051451
The Complex Structure of Protein AaLpxC from Aquifex aeolicus with ACHN-975 Molecule Suggests an Inhibitory Mechanism at Atomic-Level against Gram-Negative Bacteria
Cited by: 2
Author(s): Shuai Fan, Danyang Li, Maocai Yan, Xiao Feng, Guixia Lv, Guoxing Wu, Yuanyuan Jin, Yucheng Wang, Zhaoyong Yang
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules21070823
Identification of the Structural Features of Guanine Derivatives as MGMT Inhibitors Using 3D-QSAR Modeling Combined with Molecular Docking
Cited by: 17
Author(s): Guizhi Sun, Ting Fan, Na Zhang, Tongxiang Ren, Lu Zhao, Rugang Zhong
Software Mentions: 1
Published: over 9 years ago
10.3390/molecules23020347
Design, Synthesis, and Biological Evaluation of 2-(Benzylamino-2-Hydroxyalkyl)Isoindoline-1,3-Diones Derivatives as Potential Disease-Modifying Multifunctional Anti-Alzheimer Agents
Cited by: 24
Author(s): Dawid Panek, Anna Więckowska, Anna Pasieka, Justyna Godyń, Jakub Jończyk, Marek Bajda, Damijan Knez, Stanislav Gobec, Barbara Malawska
Software Mentions: 1
Published: almost 8 years ago
10.3390/molecules25235533
Inhibiting the NLRP3 Inflammasome
Cited by: 60
Author(s): Lina Y El-Sharkawy, David Brough, Sally Freeman
Software Mentions: 1
Published: almost 5 years ago
10.3390/molecules23092116
Structure-Based Discovery and Synthesis of Potential Transketolase Inhibitors
Cited by: 16
Author(s): Jingqian Huo, Bin Zhao, Zhe Zhang, Jihong Xing, Jinlin Zhang, Jingao Dong, Zhijin Fan
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules26082157
Native Structure-Based Peptides as Potential Protein–Protein Interaction Inhibitors of SARS-CoV-2 Spike Protein and Human ACE2 Receptor
Cited by: 22
Author(s): Norbert Odolczyk, Ewa Marzec, Maria Winiewska-Szajewska, Jarosław Poznański, Piotr Zielenkiewicz
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules26133957
Ditopic Aza-Scorpiand Ligands Interact Selectively with ds-RNA and Modulate the Interaction upon Formation of Zn2+ Complexes
Cited by: 1
Author(s): Lluís Guijarro, Álvaro Martínez‐Camarena, Javier U. Chicote, Antonio Garcı́a-España, Enrique Garcı́a-España, Mario Inclán, Begoña Verdejo, Jorge González‐García
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules25194494
Discovery of Novel Indoleamine 2,3-Dioxygenase 1 (IDO1) and Histone Deacetylase 1 (HDAC1) Dual Inhibitors Derived from the Natural Product Saprorthoquinone
Cited by: 8
Author(s): Yang‐I Lin, Heyanhao Zhang, Tong Niu, Mingkai Tang, Jun Chang
Software Mentions: 1
Published: about 5 years ago
10.3390/molecules24020305
Cell Responses to Extracellular α-Synuclein
Cited by: 31
Author(s): Alexei Surguchev, Fatemeh Nouri Emamzadeh, Andrei Surguchov
Software Mentions: 1
Published: almost 7 years ago
10.3390/molecules25204850
Engineering Stem Cell Factor Ligands with Different c-Kit Agonistic Potencies
Cited by: 6
Author(s): Tal Tilayov, Tal Hingaly, Yariv Greenshpan, Shira Cohen, Barak Akabayov, Roi Gazit, Niv Papo
Software Mentions: 1
Published: about 5 years ago
10.3390/molecules26071834
QSAR and Pharmacophore Modeling of Nitrogen Heterocycles as Potent Human N-Myristoyltransferase (Hs-NMT) Inhibitors
Cited by: 9
Author(s): Magdi E. A. Zaki, Sami A. Al‐Hussain, Vijay H. Masand, Siddhartha Akasapu, Israa Lewaa
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules23112926
Investigation of New Orexin 2 Receptor Modulators Using In Silico and In Vitro Methods
Cited by: 5
Author(s): Jana Janočková, Rafael Doležal, Eugenie Nepovimová, Tereza Kobrlová, Markéta Benková, Kamil Kuča, J. Konečný, Eva Mezeiová, Michaela Melikova, Vendula Hepnarová, Avi Ring, Ondřej Soukup, Jan Korábečný
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules26041007
Structural and Thermodynamic Analysis of the Resistance Development to Pimodivir (VX-787), the Clinical Inhibitor of Cap Binding to PB2 Subunit of Influenza A Polymerase
Cited by: 7
Author(s): Jiřı́ Gregor, Kateřina Radilová, J. Brynda, Jindřich Fanfrlík, Jan Konvalinka, Milan Kožíšek
Software Mentions: 1
Published: almost 5 years ago
10.3390/molecules26164816
Triarylborane Dyes as a Novel Non-Covalent and Non-Inhibitive Fluorimetric Markers for DPP III Enzyme
Cited by: 4
Author(s): Ž. Ban, Zrinka Karačić, Sanja Tomić, Hashem Amini, Todd B. Marder, Ivo Piantanida
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules21111534
Oxoisoaporphine as Potent Telomerase Inhibitor
Cited by: 11
Author(s): Zu‐Zhuang Wei, Qi‐Pin Qin, Jia-Nian Chen, Zhen-Feng Chen
Software Mentions: 1
Published: about 9 years ago
10.3390/molecules25092195
Effects of a Reserve Protein on Spodoptera frugiperda Development: A Biochemical and Molecular Approach to the Entomotoxic Mechanism
Cited by: 2
Author(s): Carolina Turatti Oliveira, Suzy Wider Machado, Cézar da Silva Bezerra, Marlon Henrique Cardoso, Octávio L. Franco, Carlos P. Silva, Demetrio Gomes Alves, Cristina Rios, Maria Lígia Rodrigues Macedo
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules23040917
A Comparative Genomic Survey Provides Novel Insights into Molecular Evolution of l-Aromatic Amino Acid Decarboxylase in Vertebrates
Cited by: 7
Author(s): Yanping Li, Yunyun Lv, Chao Bian, Xinxin You, Li Deng, Qiong Shi
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules23071630
Molecular Diversity of Alkenal Double Bond Reductases in the Liverwort Marchantia paleacea
Cited by: 4
Author(s): Yifeng Wu, Hongbo Zheng, Xinyan Li, Ai‐Xia Cheng, Hongxiang Lou
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules25010159
Structural Bases for the Fitness Cost of the Antibiotic-Resistance and Lethal Mutations at Position 1408 of 16S rRNA
Cited by: 3
Author(s): Jiro Kondo, M. Koganei
Software Mentions: 1
Published: almost 6 years ago
10.3390/molecules25081889
Synthesis, Docking, and In Vitro Anticoagulant Activity Assay of Hybrid Derivatives of Pyrrolo[3,2,1-ij]Quinolin-2(1H)-one as New Inhibitors of Factor Xa and Factor XIa
Cited by: 16
Author(s): Nadezhda P. Novichikhina, İvan Ilin, Anna Tashchilova, А. В. Сулимов, Danil Kutov, Irina V. Ledenyova, M. Yu. Krysin, Kh. S. Shikhaliev, Anna Gantseva, Ekaterina Gantseva, Н. А. Подоплелова, В. Б. Сулимов
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules23102726
Structural Basis for the Interaction between p53 Transactivation Domain and the Mediator Subunit MED25
Cited by: 11
Author(s): Min‐Sung Lee, Kyung-Eun Lim, Mi-Kyung Lee, Seung‐Wook Chi
Software Mentions: 1
Published: about 7 years ago
10.3390/molecules24050996
Identification of Leishmania major UDP-Sugar Pyrophosphorylase Inhibitors Using Biosensor-Based Small Molecule Fragment Library Screening
Cited by: 8
Author(s): Ohm Prakash, Jana Führing, John Post, Sharon M. Shepherd, T.C. Eadsforth, David W. Gray, Roman Fedorov, Françoise H. Routier
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules24132360
(F)uridylylated Peptides Linked to VPg1 of Foot-and- Mouth Disease Virus (FMDV): Design, Synthesis and X-Ray Crystallography of the Complexes with FMDV RNA-Dependent RNA Polymerase
Cited by: 2
Author(s): Sonia de Castro, Cristina Ferrer-Orta, Alberto Mills, Gloria Fernández-Cureses, Federico Gago, N. Verdaguer, Marı́a-José Camarasa
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules21060772
Design, Synthesis, and Biological Evaluation of Novel PARP-1 Inhibitors Based on a 1H-Thieno[3,4-d] Imidazole-4-Carboxamide Scaffold
Cited by: 6
Author(s): Lingxiao Wang, Feng Liu, Ning Jiang, Wenxia Zhou, Xinbo Zhou, Zhuo Zheng
Software Mentions: 1
Published: over 9 years ago
10.3390/molecules25225271
Cinnamides Target Leishmania amazonensis Arginase Selectively
Cited by: 13
Author(s): Edson Roberto da Silva, Júlio Abel Alfredo dos Santos Simone Come, Simone Brogi, Vincenzo Calderone, Giulia Chemi, Giuseppe Campiani, Trícia Maria Ferrreira de Sousa Oliveira, Thanh-Nhat Pham, Marc Pudlo, Christian Girard, Claudia do Carmo Maquiaveli
Software Mentions: 1
Published: about 5 years ago