10.1038/s41598-021-92176-1

Designing a multi-epitope vaccine candidate to combat MERS-CoV by employing an immunoinformatics approach
Cited by: 34
Author(s): Shafi Mahmud, Md. Oliullah Rafi, Gobindo Kumar Paul, Maria Meha Promi, Mst. Sharmin Sultana Shimu, Suvro Biswas, Talha Bin Emran, Kuldeep Dhama, Salem A. Alyami, Mohammad Ali Moni, Abu Saleh
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95044-0

Boron rich nanotube drug carrier system is suited for boron neutron capture therapy
Cited by: 5
Author(s): Fabian Heide, Matthew McDougall, Candice Harder-Viddal, R. M. Roshko, David E. Davidson, Jiandong Wu, Camila Aprosoff, Aniel Moya‐Torres, Francis Lin, Jörg Stetefeld
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-94809-x

Identification of non-classical hCA XII inhibitors using combination of computational approaches for drug design and discovery
Cited by: 4
Author(s): Mohammad M. Al‐Sanea, Garri Chilingaryan, Narek Abelyan, Grigor Arakelov, Harutyun Sahakyan, Vahram Arakelov, Karen Nazaryan, Shaimaa Hussein, Gharam M. Alazmi, Haifa E. Alsharari, Waad M. Al-faraj, Faten S. Alruwaili, Nouf Q. Albilasi, Tahani S. Alsharari, Abdulaziz A. S. Alsaleh, Turki M. Alazmi, Atiah H. Almalki, Nasser Hadal Alotaibi, Mohamed A. Abdelgawad
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-94401-3

Tracking oxidation-induced alterations in fibrin clot formation by NMR-based methods
Cited by: 5
Author(s): Wai-Hoe Lau, Nathan White, Tseng-Tsai Yeo, Russell L. Gruen, Konstantin Pervushin
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95618-y

Pathogenic nsSNPs that increase the risks of cancers among the Orang Asli and Malays
Cited by: 5
Author(s): Nurul Ain Khoruddin, Mohd NurFakhruzzaman Noorizhab, Lay Kek Teh, Farida Zuraina Mohd Yusof, Mohd Zaki Salleh
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95008-4

Biochemical and structural studies of target lectin SapL1 from the emerging opportunistic microfungus Scedosporium apiospermum
Cited by: 4
Author(s): Dania Martínez-Alarcón, Viviane Balloy, Jean‐Philippe Bouchara, Roland J. Pieters, A. Varrot
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95920-9

A peptide-based anti-Adalimumab antibody assay to monitor immune response to biologics treatment in juvenile idiopathic arthritis and childhood chronic non-infectious uveitis
Cited by: 2
Author(s): Hendrik Rusche, Edoardo Marrani, Feliciana Real‐Fernández, Roberta Ponti, Francesco Terzani, Ilaria Maccora, Olivier Monasson, Maria Vincenza Mastrolia, Elisa Peroni, Ilaria Pagnini, Rolando Cimaz, Anna Maria Papini, Gabriele Simonini, Paolo Rovero
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-96931-2

2-Carba-lysophosphatidic acid is a novel β-lysophosphatidic acid analogue with high potential for lysophosphatidic acid receptor activation and autotaxin inhibition
Cited by: 7
Author(s): Keiko Fukasawa, Mari Gotoh, Akiharu Uwamizu, Takatsugu Hirokawa, Masaki Ishikawa, Yasuhiko Shimizu, Shinji Yamamoto, Kenji Iwasa, Ken Yoshikawa, Junken Aoki, Kimiko Murakami‐Murofushi
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-96659-z

Characterization of a novel multidomain CE15-GH8 enzyme encoded by a polysaccharide utilization locus in the human gut bacterium Bacteroides eggerthii
Cited by: 7
Author(s): Cathleen Kmezik, Daniel Krska, Scott Mazurkewich, Johan Larsbrink
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98314-z

Association of the malate dehydrogenase-citrate synthase metabolon is modulated by intermediates of the Krebs tricarboxylic acid cycle
Cited by: 7
Author(s): Joy Omini, Izabela Wojciechowska, Aleksandra Skirycz, Hideaki Moriyama, Toshihiro Obata
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98419-5

Structural basis of human PDZD8–Rab7 interaction for the ER-late endosome tethering
Cited by: 11
Author(s): Haider Ali Khan, Lin Chen, Lingchen Tan, Young Jun Im
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98357-2

Genetic analysis by targeted next-generation sequencing and novel variation identification of maple syrup urine disease in Chinese Han population
Cited by: 1
Author(s): Xiaohua Fang, Xuejun Zhu, Feng Yin, Ying Bai, Xuechao Zhao, Liu Ning, Xiangdong Kong
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98790-3

Redox status of cysteines does not alter functional properties of human dUTPase but the Y54C mutation involved in monogenic diabetes decreases protein stability
Cited by: 0
Author(s): J. Szabó, Kinga Nyíri, Dániel Andrási, Judit Matejka, Olivér Ozohanics, Beáta G. Vértessy
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-99357-y

Increased survival in puppies affected by Canine Parvovirus type II using an immunomodulator as a therapeutic aid
Cited by: 7
Author(s): Adriana I Muñoz, Luis Vallejo‐Castillo, Ana L Fragozo, Said Vázquez‐Leyva, Lenin Pavón, Gilberto Pérez‐Sánchez, Rodolfo Soria-Castro, Gabriela Mellado-Sánchez, Laura Cobos-Marín, Sonia Mayra Pérez‐Tapia
Software Mentions: 1
Published: almost 5 years ago

10.1126/scisignal.abh2071

Mn ²⁺ coordinates Cap-0-RNA to align substrates for efficient 2′- <i>O</i> -methyl transfer by SARS-CoV-2 nsp16
Cited by: 12
Author(s): G. Minasov, Mónica Rosas‐Lemus, L. Shuvalova, Nicole L. Inniss, J.S. Brunzelle, Courtney M. Daczkowski, Paul Hoover, Andrew D. Mesecar, K.J.F. Satchell
Software Mentions: 1
Published: about 5 years ago

10.1126/science.abf1611

SARS-CoV-2 M ^pro inhibitors with antiviral activity in a transgenic mouse model
Cited by: 298
Author(s): Juan Qiao, Yueshan Li, Rui Zeng, Feng-Liang Liu, Rong-Hua Luo, Chong Huang, Yifei Wang, Jie Zhang, Baoxue Quan, Chaoyong Shen, Xin Mao, Xinlei Liu, Wenhao Sun, Wei Yang, Xincheng Ni, Kai Wang, Ling Xu, Zhenhao Duan, Qing-Cui Zou, Hailin Zhang, Qu Wang, Yanghaopeng Long, Minghua Li, Ruicheng Yang, Jianxin You, Yangli Zhou, Rui Yao, Wenpei Li, Jingming Liu, Pei Chen, Yang Liu, Guifeng Lin, Xin Yang, Jun Zou, Linli Li, Yiguo Hu, Guangwen Lu, Yuquan Wei, Yong‐Tang Zheng, Jian Lei, Shengyong Yang
Software Mentions: 1
Published: over 5 years ago

10.1100/2012/165258

Docking Studies, Synthesis, Characterization and Evaluation of Their Antioxidant and Cytotoxic Activities of Some Novel Isoxazole-Substituted 9-Anilinoacridine Derivatives
Cited by: 26
Author(s): Kalirajan Rajagopal, M. H. Mohammed Rafick, S. Sankar, Jubie Selvaraj
Software Mentions: 1
Published: over 14 years ago

10.1100/2012/738423

Computational Methods to Work as First-Pass Filter in Deleterious SNP Analysis of Alkaptonuria
Cited by: 11
Author(s): R. Magesh, George Priya Doss C
Software Mentions: 1
Published: over 14 years ago

10.1155/2013/305081

Studies of the Interaction between Isoimperatorin and Human Serum Albumin by Multispectroscopic Method: Identification of Possible Binding Site of the Compound Using Esterase Activity of the Protein
Cited by: 37
Author(s): Samira Ranjbar, Yalda Shokoohinia, Sirous Ghobadi, Nooshin Bijari, Sakineh Gholamzadeh, Nastaran Moradi, Mohammad Reza Ashrafi-Kooshk, Abbas Aghaei, Reza Khodarahmi
Software Mentions: 1
Published: over 13 years ago

10.1155/2014/536084

Effects of Water Models on Binding Affinity: Evidence from All-Atom Simulation of Binding of Tamiflu to A/H5N1 Neuraminidase
Cited by: 33
Author(s): Thanh Tuan Nguyen, Viet Hoang Man, Mai Suan Li
Software Mentions: 1
Published: over 12 years ago

10.1155/2015/740815

Discovery of Specific Inhibitors for Intestinal<i>E. coli</i> <i>β</i>-Glucuronidase through<i>In Silico</i>Virtual Screening
Cited by: 11
Author(s): Tian‐Lu Cheng, Kai‐Hsiang Chuang, Steve R. Roffler, Kai-Wen Cheng, Yu Lin Leu, Chih Hung Chuang, Chien Chaio Huang, Chien-Han Kao, Yuan-Chin Hsieh, Long Chang, Chen Tian, Chien Shu Chen
Software Mentions: 1
Published: over 11 years ago

10.1155/2021/6642626

Predicting the Most Deleterious Missense Nonsynonymous Single-Nucleotide Polymorphisms of Hennekam Syndrome-Causing CCBE1 Gene, In Silico Analysis
Cited by: 7
Author(s): Khyber Shinwari, Guojun Liu, S. S. Deryabina, Mikhail A. Bolkov, Irina A. Tuzankina, V. А. Chereshnev
Software Mentions: 1
Published: about 5 years ago

10.1155/2014/970315

Human Interferon Alpha-2b: A Therapeutic Protein for Cancer Treatment
Cited by: 68
Author(s): Ratih Asmana Ningrum
Software Mentions: 1
Published: over 12 years ago

10.3390/s140713285

Strategy for Making a Superior Quenchbody to Proteins: Effect of the Fluorophore Position
Cited by: 16
Author(s): Hee Jin Jeong, Hiroshi Ueda
Software Mentions: 1
Published: almost 12 years ago

10.3390/s19224852

Determination of Picomolar Concentrations of Paraoxon in Human Urine by Fluorescence-Based Enzymatic Assay
Cited by: 12
Author(s): Giovanni Paolo Cetrangolo, Carla Gori, Jānis Ruško, Sara Terreri, Giuseppe Manco, Amelia Cimmino, Ferdinando Febbraio
Software Mentions: 1
Published: over 6 years ago

10.3390/s20030598

Molecular Dissection of dH3w, A Fluorescent Peptidyl Sensor for Zinc and Mercury
Cited by: 2
Author(s): Marialuisa Siepi, Rosario Oliva, Filomena Battista, Luigi Petraccone, Pompea Del Vecchio, Viviana Izzo, Fabrizio Dal Piaz, Rachele Isticato, Eugenio Notomista, Giuliana Donadio
Software Mentions: 1
Published: over 6 years ago

10.3390/s20123501

Spectral Characteristics and Sensor Ability of a New 1,8-Naphthalimide and Its Copolymer with Styrene
Cited by: 3
Author(s): Desislava Staneva, Silvia Angelova, Ivo Grabchev
Software Mentions: 1
Published: about 6 years ago

10.1038/s41392-019-0057-6

Genome-wide identification of DNA-PKcs-associated RNAs by RIP-Seq
Cited by: 15
Author(s): Zhiquan Song, Yufeng Xie, Zongpei Guo, Han Yang, Hua Guan, Xiaodan Liu, Teng Ma, Ping‐Kun Zhou
Software Mentions: 1
Published: about 7 years ago

10.1038/s41392-020-00365-7

SARS-CoV-2 spike behavior in situ: a Cryo-EM images for a better understanding of the COVID-19 pandemic
Cited by: 16
Author(s): Alaa M. Ismail, Abdo A. Elfiky
Software Mentions: 1
Published: over 5 years ago

10.1038/s41392-021-00649-6

Identification of SARS-CoV-2-against aptamer with high neutralization activity by blocking the RBD domain of spike protein 1
Cited by: 51
Author(s): Ge Yang, Ziyue Li, Mohammed Irfan, Liping Zhao, Wei Wei, Haihua Xiao, Weisheng Guo, Yongxiang Zhao, Feng Qu, Yuanyu Huang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41392-021-00756-4

S19W, T27W, and N330Y mutations in ACE2 enhance SARS-CoV-2 S-RBD binding toward both wild-type and antibody-resistant viruses and its molecular basis
Cited by: 21
Author(s): Fei Ye, Xi Lin, Zimin Chen, Fulun Yang, Sheng Lin, Jing Yang, Hua Chen, Honglu Sun, Lingling Wang, Ao Wen, Xindan Zhang, Yushan Dai, Yu Cao, Jingyun Yang, Guobo Shen, Li Yang, Jiong Li, Zhenling Wang, Wei Wang, Xiawei Wei, Guangwen Lu
Software Mentions: 1
Published: almost 5 years ago

10.1186/2044-5040-4-11

Kelch proteins: emerging roles in skeletal muscle development and diseases
Cited by: 120
Author(s): Vandana Gupta, Alan H. Beggs
Software Mentions: 1
Published: over 12 years ago

10.1186/s13395-020-00241-6

Drosophila myosin mutants model the disparate severity of type 1 and type 2B distal arthrogryposis and indicate an enhanced actin affinity mechanism
Cited by: 4
Author(s): Yanjuan Guo, William A. Kronert, Karen H. Hsu, Alice H. Huang, Floyd Sarsoza, Kaylyn M. Bell, Jennifer A. Suggs, Douglas M. Swank, Sanford I. Bernstein
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13029-015-0037-3

Molecular-docking study of malaria drug target enzyme transketolase in Plasmodium falciparum 3D7 portends the novel approach to its treatment
Cited by: 31
Author(s): Md. Anayet Hasan, Md. Habibul Hasan Mazumder, Arshad Chowdhury, Amit Datta, Mukhtar A. Khan
Software Mentions: 1
Published: about 11 years ago

10.1186/s40064-016-1794-4

Metabolic inhibition of meloxicam by specific CYP2C9 inhibitors in Cunninghamella blakesleeana NCIM 687: in silico and in vitro studies
Cited by: 6
Author(s): G. Shyam Prasad, K. Srisailam, R.B. Sashidhar
Software Mentions: 1
Published: over 10 years ago

10.1186/s40064-016-2752-x

Binding interaction of a gamma-aminobutyric acid derivative with serum albumin: an insight by fluorescence and molecular modeling analysis
Cited by: 21
Author(s): Samir Kumar Pal, Sumit Kumar Pramanik, Baisali Bhattacharya, Biswadip Banerji, Nakul C. Maiti
Software Mentions: 1
Published: almost 10 years ago

10.1155/2015/346714

HLA-E: Presentation of a Broader Peptide Repertoire Impacts the Cellular Immune Response—Implications on HSCT Outcome
Cited by: 48
Author(s): Thomas Kraemer, Alexander A. Celik, Trevor Huyton, Heike Kunze‐Schumacher, Rainer Blasczyk, Christina Bade‐Doeding
Software Mentions: 1
Published: over 11 years ago

10.1155/2017/8596135

The DEAD-Box RNA Helicase DDX3 Interacts with m⁶A RNA Demethylase ALKBH5
Cited by: 51
Author(s): Abdullah Shah, Robina Farooq, Hassaan Mehboob Awan, Shanshan Hu, Xiaolin Wang, Liang Chen, Shengfang Ge
Software Mentions: 1
Published: over 9 years ago

10.1016/j.str.2011.09.020

Crystallographic Analysis of Polypyrimidine Tract-Binding Protein-Raver1 Interactions Involved in Regulation of Alternative Splicing
Cited by: 37
Author(s): Amar Joshi, Miguel B. Coelho, Olga Kotik-Kogan, Peter Simpson, Stephen Matthews, Christopher W.J. Smith, Stephen Curry
Software Mentions: 1
Published: over 14 years ago

10.1016/j.str.2008.02.021

Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3′ Ends by the Human La Protein
Cited by: 75
Author(s): Olga Kotik-Kogan, Elizabeth R. Valentine, Domenico Sanfelice, Maria R. Conte, Stephen Curry
Software Mentions: 1
Published: about 18 years ago

10.1016/j.str.2013.02.007

The Architecture of EssB, an Integral Membrane Component of the Type VII Secretion System
Cited by: 17
Author(s): Martin Zoltner, D. Norman, Paul K. Fyfe, Hassane El Mkami, Tracy Palmer, William N. Hunter
Software Mentions: 1
Published: over 13 years ago

10.1016/j.str.2008.04.017

The Crystal Structure of the Escherichia coli RNase E Apoprotein and a Mechanism for RNA Degradation
Cited by: 74
Author(s): Daniel J. Koslover, Anastasia J. Callaghan, M.J. Marcaida, Elspeth F. Garman, Monika Martick, William G. Scott, Ben F. Luisi
Software Mentions: 1
Published: almost 18 years ago

10.1016/j.str.2013.03.005

Multiscale Simulations Reveal Conserved Patterns of Lipid Interactions with Aquaporins
Cited by: 69
Author(s): Phillip J. Stansfeld, Elizabeth Jefferys, Mark S. P. Sansom
Software Mentions: 1
Published: about 13 years ago

10.1016/j.str.2009.10.012

Crystallographic Insight into Collagen Recognition by Discoidin Domain Receptor 2
Cited by: 118
Author(s): Federico Carafoli, Dominique Bihan, Stavros Stathopoulos, Antonios D. Konitsiotis, Marc Kvansakul, Richard W. Farndale, Birgit Leitinger, Erhard Hohenester
Software Mentions: 1
Published: over 16 years ago

10.1016/j.str.2013.12.004

Structure of the Human FANCL RING-Ube2T Complex Reveals Determinants of Cognate E3-E2 Selection
Cited by: 68
Author(s): Charlotte Hodson, A. Purkiss, Jennifer A. Miles, Helen Walden
Software Mentions: 1
Published: over 12 years ago

10.1016/j.str.2014.10.017

Molecular Basis of Histone Tail Recognition by Human TIP5 PHD Finger and Bromodomain of the Chromatin Remodeling Complex NoRC
Cited by: 55
Author(s): C. Tallant, Erica Valentini, O. Fedorov, Lois M. Overvoorde, Fleur M. Ferguson, P. Filippakopoulos, Dmitri I. Svergun, Stefan Knapp, A. Ciulli
Software Mentions: 1
Published: over 11 years ago

10.1016/j.str.2011.04.010

Biophysical and Computational Studies of Membrane Penetration by the GRP1 Pleckstrin Homology Domain
Cited by: 54
Author(s): Craig N. Lumb, Jun He, Yi Xue, Phillip J. Stansfeld, Robert V. Stahelin, Tatiana G. Kutateladze, Mark S. P. Sansom
Software Mentions: 1
Published: almost 15 years ago

10.1016/j.str.2012.07.003

ATP-Driven Remodeling of the Linker Domain in the Dynein Motor
Cited by: 78
Author(s): A. J. Roberts, Bara Malkova, Matthew Walker, Hitoshi Sakakibara, Naoki Numata, Takahide Kon, Reiko Ohkura, Thomas A. Edwards, Peter J. Knight, Kazuo Sutoh, Kazuhiro Oiwa, Simon Burgess
Software Mentions: 1
Published: almost 14 years ago

10.1016/j.str.2015.04.021

The SWI/SNF Subunit INI1 Contains an N-Terminal Winged Helix DNA Binding Domain that Is a Target for Mutations in Schwannomatosis
Cited by: 30
Author(s): Mark D. Allen, Stefan Freund, Giovanna Zinzalla, Mark Bycroft
Software Mentions: 1
Published: about 11 years ago

10.1016/j.str.2012.08.017

The Crystal Structure of the Intact E. coli RelBE Toxin-Antitoxin Complex Provides the Structural Basis for Conditional Cooperativity
Cited by: 82
Author(s): Andreas Bøggild, N. Sofos, Kasper R. Andersen, Ane Feddersen, Ashley Easter, Lori A. Passmore, D.E. Brodersen
Software Mentions: 1
Published: almost 14 years ago

10.1016/j.str.2016.02.001

Unlocking the Bacterial SecY Translocon
Cited by: 38
Author(s): Robin A. Corey, William J. Allen, Joanna Komar, Simonas Masiulis, Sam A. Menzies, Alice Robson, Ian Collinson
Software Mentions: 1
Published: over 10 years ago

10.1016/j.str.2017.04.013

Structural Studies of HHARI/UbcH7∼Ub Reveal Unique E2∼Ub Conformational Restriction by RBR RING1
Cited by: 42
Author(s): Katja K. Dove, Jennifer L. Olszewski, Luigi Martino, David M. Duda, Xiaoli Wu, Darcie J. Miller, Katherine H. Reiter, Katrin Rittinger, Brenda A. Schulman, Rachel E. Klevit
Software Mentions: 1
Published: about 9 years ago

10.1016/j.str.2017.05.005

Structural Basis for Specific Interaction of TGFβ Signaling Regulators SARA/Endofin with HD-PTP
Cited by: 12
Author(s): Deepankar Gahloth, Colin Levy, Larry P. Walker, Lydia Wunderley, A. Paul Mould, Sandra Taylor, Philip Woodman, Lydia Tabernero
Software Mentions: 1
Published: about 9 years ago

10.1016/j.str.2017.10.004

The Cryoelectron Microscopy Structure of the Type 1 Chaperone-Usher Pilus Rod
Cited by: 43
Author(s): Manuela K. Hospenthal, Dawid Zyla, Tiago Costa, Adam Redzej, Christoph Giese, James Lillington, Rudi Glockshuber, Gabriel Waksman
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2017.11.008

Second-Shell Basic Residues Expand the Two-Metal-Ion Architecture of DNA and RNA Processing Enzymes
Cited by: 31
Author(s): Vito Genna, Matteo Colombo, Marco De Vivo, Marco Marcia
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2017.12.003

Robo1 Forms a Compact Dimer-of-Dimers Assembly
Cited by: 24
Author(s): Наталія Александрова, Irina Gutsche, Eaazhisai Kandiah, Sergiy V. Avilov, Maxim V. Petoukhov, E. Seiradake, A.A. McCarthy
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2018.02.007

Structural and Functional Insights into Bacillus subtilis Sigma Factor Inhibitor, CsfB
Cited by: 12
Author(s): Santiago Martínez-Lumbreras, Caterina Alfano, N.J. Evans, Katherine M. Collins, Kelly A. Flanagan, R. Andrew Atkinson, E. Krysztofinska, Anupama Vydyanath, Jacquelin Jackter, Sarah Fixon-Owoo, Amy H. Camp, Rivka L. Isaacson
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2018.03.019

The Structure of an Infectious Human Polyomavirus and Its Interactions with Cellular Receptors
Cited by: 29
Author(s): Daniel L. Hurdiss, Martin Frank, Joseph S. Snowden, Andrew Macdonald, Neil A. Ranson
Software Mentions: 1
Published: about 8 years ago

10.1016/j.str.2018.12.001

Selection and Characterization of Artificial Proteins Targeting the Tubulin α Subunit
Cited by: 16
Author(s): Valérie Campanacci, Agathe Urvoas, Tanja Consolati, Soraya Cantos-Fernandes, Magali Aumont-Niçaise, Marie Valerio-Lepiniec, Thomas Surrey, Philippe Minard, B. Gigant
Software Mentions: 1
Published: over 7 years ago

10.1016/j.jmb.2009.12.047

The Indispensable N-Terminal Half of eIF3j/HCR1 Cooperates with its Structurally Conserved Binding Partner eIF3b/PRT1-RRM and with eIF1A in Stringent AUG Selection
Cited by: 76
Author(s): Latifa ElAntak, Susan Wagner, Anna Herrmannová, Martina Karásková, Edit Rutkai, Peter J. Lukavsky, Leoš Shivaya Valášek
Software Mentions: 1
Published: over 16 years ago

10.1016/j.jmb.2010.06.025

Structure and Reactivity of Bacillus subtilis MenD Catalyzing the First Committed Step in Menaquinone Biosynthesis
Cited by: 33
Author(s): Alice Dawson, Minjiao Chen, Paul K. Fyfe, Zhihong Guo, William N. Hunter
Software Mentions: 1
Published: almost 16 years ago

10.1016/j.jmb.2009.09.006

RelB and RelE of Escherichia coli Form a Tight Complex That Represses Transcription via the Ribbon–Helix–Helix Motif in RelB
Cited by: 107
Author(s): Martin Overgaard, Jonas Borch, Kenn Gerdes
Software Mentions: 1
Published: over 16 years ago

10.1016/j.jmb.2019.04.009

Can Predicted Protein 3D Structures Provide Reliable Insights into whether Missense Variants Are Disease Associated?
Cited by: 300
Author(s): Sirawit Ittisoponpisan, Suhail A. Islam, Tarun Khanna, Eman Alhuzimi, Alessia David, Michael J.E. Sternberg
Software Mentions: 1
Published: about 7 years ago

10.1016/j.jmb.2010.05.053

An Alternative Conformation of the T-Cell Receptor α Constant Region
Cited by: 14
Author(s): Gijs I van Boxel, S. Holmes, Lars Fugger, E Y Jones
Software Mentions: 1
Published: about 16 years ago

10.1016/j.jmb.2008.01.030

Structure of the Tandem Fibronectin Type 3 Domains of Neural Cell Adhesion Molecule
Cited by: 37
Author(s): Federico Carafoli, Jane L. Saffell, Erhard Hohenester
Software Mentions: 1
Published: over 18 years ago

10.1016/j.jmb.2015.03.010

The Pentameric Nucleoplasmin Fold Is Present in Drosophila FKBP39 and a Large Number of Chromatin-Related Proteins
Cited by: 29
Author(s): Christian Edlich‐Muth, Jean-Baptiste Artero, Philip Callow, Marcin R. Przewloka, Aleksandra A. Watson, Wei Zhang, David M. Glover, Janusz Dębski, Michał Dadlez, Adam Round, V. Trevor Forsyth, Ernest D. Laue
Software Mentions: 1
Published: about 11 years ago

10.1016/j.jmb.2011.01.034

The DNA-Binding Domain of Human PARP-1 Interacts with DNA Single-Strand Breaks as a Monomer through Its Second Zinc Finger
Cited by: 132
Author(s): Sebastian Eustermann, Hortense Videler, Ji‐Chun Yang, Paul T. Cole, Dominika T. Gruszka, Dmitry B. Veprintsev, David Neuhaus
Software Mentions: 1
Published: over 15 years ago

10.1016/j.jmb.2012.08.005

Structural Basis for ASPP2 Recognition by the Tumor Suppressor p73
Cited by: 20
Author(s): P. Canning, Frank von Delft, Alex N. Bullock
Software Mentions: 1
Published: over 13 years ago

10.1016/j.jmb.2010.07.007

Allosteric Remodelling of the Histone H3 Binding Pocket in the Pygo2 PHD Finger Triggered by Its Binding to the B9L/BCL9 Co-Factor
Cited by: 40
Author(s): Teresa L. Miller, Trevor J. Rutherford, Christopher M. Johnson, Marc Fiedler, Mariann Bienz
Software Mentions: 1
Published: almost 16 years ago

10.1016/j.jmb.2009.09.061

The Structure of the N-Terminus of Kindlin-1: A Domain Important for αIIbβ3 Integrin Activation
Cited by: 82
Author(s): Benjamin T. Goult, Mohamed Bouaouina, David S. Harburger, Neil Bate, Bipin Patel, Nicholas J. Anthis, Iain D. Campbell, David A. Calderwood, Igor Barsukov, G. C. K. Roberts, David R. Critchley
Software Mentions: 1
Published: over 16 years ago

10.1016/j.jmb.2019.06.003

CHAP: A Versatile Tool for the Structural and Functional Annotation of Ion Channel Pores
Cited by: 90
Author(s): Gianni Klesse, Shanlin Rao, Mark S.P. Sansom, Stephen J. Tucker
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.jmb.2009.01.069

Crystallographic and Cellular Characterisation of Two Mechanisms Stabilising the Native Fold of α1-Antitrypsin: Implications for Disease and Drug Design
Cited by: 34
Author(s): Bibek Gooptu, Elena Miranda, Irene Nobeli, Meera Mallya, A. Purkiss, Sarah C. Leigh Brown, Charlotte Summers, Russell L. Phillips, David A. Lomas, Tracey E. Barrett
Software Mentions: 1
Published: over 17 years ago

10.1016/j.jmb.2015.03.021

Structure of a Single-Chain Fv Bound to the 17 N-Terminal Residues of Huntingtin Provides Insights into Pathogenic Amyloid Formation and Suppression
Cited by: 21
Author(s): Erwin De Genst, Dimitri Y. Chirgadze, Fabrice Klein, David Butler, Dijana Matak-Vinković, Yvon Trottier, James S. Huston, Anne Messer, Christopher M. Dobson
Software Mentions: 1
Published: about 11 years ago

10.1016/j.jmb.2008.03.077

Thioredoxin A Active-Site Mutants Form Mixed Disulfide Dimers That Resemble Enzyme–Substrate Reaction Intermediates
Cited by: 20
Author(s): Thijs R. H. M. Kouwen, Juni Andréll, Rianne Schrijver, Jean-Yves F. Dubois, M.J. Maher, So Iwata, E.P. Carpenter, Jan Maarten van Dijl
Software Mentions: 1
Published: about 18 years ago

10.1016/j.jmb.2014.11.009

Distinct Features of Cap Binding by eIF4E1b Proteins
Cited by: 21
Author(s): Dorota Kubacka, Ricardo Núñez Miguel, Nicola Minshall, Edward Darżynkiewicz, Nancy Standart, Joanna Zuberek
Software Mentions: 1
Published: over 11 years ago

10.1016/j.jmb.2010.01.074

Protein Folding Requires Crowd Control in a Simulated Cell
Cited by: 76
Author(s): Benjamin R. Jefferys, Lawrence A. Kelley, Michael J.E. Sternberg
Software Mentions: 1
Published: over 16 years ago

10.1016/j.jmb.2010.03.008

Structural and Functional Analysis of the Engineered Type I DNA Methyltransferase EcoR124INT
Cited by: 11
Author(s): James E. Taylor, Philip Callow, Anna Swiderska, Geoff Kneale
Software Mentions: 1
Published: about 16 years ago

10.1016/j.jmb.2016.07.003

Chopping and Changing: the Evolution of the Flavin-dependent Monooxygenases
Cited by: 65
Author(s): María Laura Mascotti, Maximiliano Juri Ayub, Nicholas Furnham, Janet M. Thornton, Roman A. Laskowski
Software Mentions: 1
Published: about 10 years ago

10.1016/j.jmb.2011.03.033

Structural Analysis of a Novel Class of R–M Controller Proteins: C.Csp231I from Citrobacter sp. RFL231
Cited by: 12
Author(s): J.E. McGeehan, Simon Streeter, Sarah Thresh, James E. Taylor, M.B. Shevtsov, Geoff Kneale
Software Mentions: 1
Published: about 15 years ago

10.1016/j.jmb.2012.01.043

Micrococcal Nuclease Does Not Substantially Bias Nucleosome Mapping
Cited by: 69
Author(s): James Allan, Ross M. Fraser, Tom Owen-Hughes, David Keszenman-Pereyra
Software Mentions: 1
Published: over 14 years ago

10.1016/j.jmb.2013.09.018

Subunit Positioning and Stator Filament Stiffness in Regulation and Power Transmission in the V1 Motor of the Manduca sexta V-ATPase
Cited by: 22
Author(s): Stephen P. Muench, Sjors H.W. Scheres, Markus Huss, Clair Phillips, Olga Vitavska, Helmut Wieczorek, John Trinick, Michael A. Harrison
Software Mentions: 1
Published: over 12 years ago

10.1016/j.jmb.2019.04.022

Mechanisms of σ54-Dependent Transcription Initiation and Regulation
Cited by: 42
Author(s): Amy E. Danson, Milija Jovanovic, Martin Buck, Xiaodong Zhang
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.jmb.2008.04.070

Ribonuclease A Homologues of the Zebrafish: Polymorphism, Crystal Structures of Two Representatives and their Evolutionary Implications
Cited by: 23
Author(s): K. Kazakou, Daniel E. Holloway, Stephen H. Prior, Vasanta Subramanian, K. Ravi Acharya
Software Mentions: 1
Published: about 18 years ago

10.1016/j.jmb.2012.07.010

Gating Movement of Acetylcholine Receptor Caught by Plunge-Freezing
Cited by: 174
Author(s): Nigel Unwin, Yoshinori Fujiyoshi
Software Mentions: 1
Published: almost 14 years ago

10.1016/j.jmb.2011.02.020

Crystal Structure of R120G Disease Mutant of Human αB-Crystallin Domain Dimer Shows Closure of a Groove
Cited by: 106
Author(s): Alice R. Clark, C.E. Naylor, Claire Bagnéris, Nicholas H. Keep, C. Slingsby
Software Mentions: 1
Published: over 15 years ago

10.1016/j.jmb.2008.12.033

Insights into the Conformational Variability and Regulation of Human Nek2 Kinase
Cited by: 48
Author(s): Isaac M. Westwood, Donna-Marie Cheary, Joanne E. Baxter, Mark W. Richards, R.L.M. van Montfort, Andrew M. Fry, Richard Bayliss
Software Mentions: 1
Published: over 17 years ago

10.1016/j.jmb.2010.06.028

Interactions of the Melanocortin-4 Receptor with the Peptide Agonist NDP-MSH
Cited by: 20
Author(s): Kathryn Chapman, Gemma K. Kinsella, Alan Cox, Dan Donnelly, John B. C. Findlay
Software Mentions: 1
Published: almost 16 years ago

10.1530/JME-16-0024

Antiestrogens: structure-activity relationships and use in breast cancer treatment
Cited by: 61
Author(s): Tatiana Traboulsi, Mohamed El Ezzy, James L. Gleason, Sylvie Mader
Software Mentions: 1
Published: over 9 years ago

10.1007/s00239-014-9639-7

One origin for metallo-β-lactamase activity, or two? An investigation assessing a diverse set of reconstructed ancestral sequences based on a sample of phylogenetic trees
Cited by: 21
Author(s): Rosanna Grace Alderson, Daniel Barker, John B. O. Mitchell
Software Mentions: 1
Published: almost 12 years ago

10.1186/1750-2187-6-2

Activation of &lt;em&gt;K-RAS&lt;/em&gt; by co-mutation of codons 19 and 20 is transforming
Cited by: 24
Author(s): Adam Naguib, Catherine H. Wilson, David J. Adams, Mark J. Arends
Software Mentions: 1
Published: over 15 years ago

10.1186/1750-2187-8-3

Determinants at the N- and C-termini of Gα&lt;sub&gt;12&lt;/sub&gt; required for activation of Rho-mediated signaling
Cited by: 9
Author(s): Benjamin J. Ritchie, William C. Smolski, Ellyn R Montgomery, Elizabeth S. Fisher, Tina Young Choi, Calla Olson, Lori A Foster, Thomas E. Meigs
Software Mentions: 1
Published: over 13 years ago

10.3892/ol.2013.1679

Analysis of the anticancer activity of curcuminoids, thiotryptophan and 4-phenoxyphenol derivatives
Cited by: 18
Author(s): Shireen Parsai, Rick W. Keck, Ewa Skrzypczak‐Jankun, Jerzy Jankun
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.01211

Multiple interfaces between a serine recombinase and an enhancer control site-specific DNA inversion
Cited by: 20
Author(s): Meghan M. McLean, Yong Keun Chang, Gautam Dhar, John K. Heiss, Reid C. Johnson
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.39451

Redox-dependent rearrangements of the NiFeS cluster of carbon monoxide dehydrogenase
Cited by: 42
Author(s): E.C. Wittenborn, Mériem Merrouch, Chie Ueda, Laura Fradale, Christophe Léger, Vincent Fourmond, Maria-Eirini Pandelia, Sébastien Dementin, Catherine L. Drennan
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.54469

R-spondins engage heparan sulfate proteoglycans to potentiate WNT signaling
Cited by: 32
Author(s): Ramin Dubey, Peter van Kerkhof, Ingrid Jordens, Tomas Malinauskas, Ganesh V. Pusapati, Joseph K McKenna, Dan Li, Jan E. Carette, Mitchell Ho, Christian Siebold, Madelon M. Maurice, Andres M. Lebensohn, Rajat Rohatgi
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.13909

Quality control in oocytes by p63 is based on a spring-loaded activation mechanism on the molecular and cellular level
Cited by: 52
Author(s): Daniel Coutandin, Christian Osterburg, Ratnesh Kumar Srivastav, Manuela Sumyk, Sebastian Kehrloesser, Jakob Gebel, Marcel Tuppi, Jens Hannewald, Björn Malte Schäfer, E. Salah, Sebastian Mathea, Uta Müller-Kuller, James Doutch, Manuel Grez, Stefan Knapp, Volker Dötsch
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.03433

Analysis of the crystal structure of an active MCM hexamer
Cited by: 52
Author(s): Justin M. Miller, Buenafe T. Arachea, L.B. Epling, Eric J. Enemark
Software Mentions: 1
Published: almost 12 years ago

10.7554/eLife.37138

Human gut Bacteroides capture vitamin B12 via cell surface-exposed lipoproteins
Cited by: 51
Author(s): Aaron G. Wexler, Whitman B. Schofield, Patrick H. Degnan, Ewa Folta‐Stogniew, Natasha A. Barry, Andrew L. Goodman
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.11134

cryo-EM structures of the E. coli replicative DNA polymerase reveal its dynamic interactions with the DNA sliding clamp, exonuclease and τ
Cited by: 76
Author(s): Rafael Fernández-Leiro, Julian Conrad, Sjors H.W. Scheres, Meindert H. Lamers
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.01993

A conserved MCM single-stranded DNA binding element is essential for replication initiation
Cited by: 70
Author(s): C.A. Froelich, Sung-Myung Kang, L.B. Epling, Stephen P. Bell, Eric J. Enemark
Software Mentions: 1
Published: over 12 years ago