10.1093/jxb/erx030

Phosphorylation of the phytosulfokine peptide receptor PSKR1 controls receptor activity
Cited by: 14
Author(s): Christine Kaufmann, Michael Motzkus, Margret Sauter
Software Mentions: 1
Published: over 9 years ago

10.1093/jxb/erx113

The 2-oxoglutarate-dependent dioxygenase superfamily participates in tanshinone production in Salvia miltiorrhiza
Cited by: 38
Author(s): Zhichao Xu, Jingyuan Song
Software Mentions: 1
Published: over 9 years ago

10.1093/jxb/erx070

Crystal structures of β-carboxysome shell protein CcmP: ligand binding correlates with the closed or open central pore
Cited by: 37
Author(s): Anna-Maria Larsson, Dirk Hasse, K. Valegård, Ingemar Andersson
Software Mentions: 1
Published: over 9 years ago

10.1093/jxb/erx115

β-Carboxysome bioinformatics: identification and evolution of new bacterial microcompartment protein gene classes and core locus constraints
Cited by: 33
Author(s): Maik S. Sommer, Fei Cai, Matthew R. Melnicki, Cheryl A. Kerfeld
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms20051206

Molecular Characterization of Microtubule Affinity-Regulating Kinase4 from Sus scrofa and Promotion of Lipogenesis in Primary Porcine Placental Trophoblasts
Cited by: 15
Author(s): Tian Liang, Aiyou Wen, Shuang-Lin Dong, Peishi Yan
Software Mentions: 1
Published: over 7 years ago

10.1093/jxb/ery036

The elusive ligand complexes of the DWARF14 strigolactone receptor
Cited by: 34
Author(s): Gunilla Carlsson, Dirk Hasse, Francesca Cardinale, Cristina Prandi, Ingemar Andersson
Software Mentions: 1
Published: over 8 years ago

10.1093/jxb/ery099

MADS transcription factors cooperate: complexities of complex formation
Cited by: 13
Author(s): Véronique Hugouvieux, Chloé Zubieta
Software Mentions: 1
Published: over 8 years ago

10.6026/97320630015456

Structure to function analysis with antigenic characterization of a hypothetical protein, HPAG1_0576 from Helicobacter pylori HPAG1
Cited by: 6
Author(s): Hanan Ashrafi, Muntequa Ishtiaq Siraji, Nazmir Nur Showva, Mohammad Uzzal Hossain, Tareq Hossan, Ashraful Hasan, Abdullah Mohammad Shohael, Mohammad Mahfuz Ali Khan Shawan
Software Mentions: 1
Published: almost 7 years ago

10.1093/jxb/ery351

<i>Verticillium dahliae</i>PevD1, an Alt a 1-like protein, targets cotton PR5-like protein and promotes fungal infection
Cited by: 44
Author(s): Yi Zhang, Yin Gao, Yingbo Liang, Yuchen Dong, Xiufen Yang, Dewen Qiu
Software Mentions: 1
Published: almost 8 years ago

10.1016/j.kint.2020.01.045

Long-term outcomes and response to treatment in diacylglycerol kinase epsilon nephropathy
Cited by: 29
Author(s): Vicky Brocklebank, Gurinder Kumar, Alexander J. Howie, Jayanthi Chandar, David V. Milford, Janet Craze, Jonathan Evans, Eric Finlay, Michael Freundlich, Daniel P. Gale, Carol Inward, Martin Mraz, Caroline Jones, William Wong, Stephen D. Marks, John Connolly, Bronte M. Corner, Kate Smith-Jackson, Patrick R. Walsh, Kevin J. Marchbank, Claire L. Harris, Valerie Wilson, Edwin K.S. Wong, Michal Malina, Sally Johnson, Neil Sheerin, David Kavanagh
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.ppat.0030069

Structure of GrlR and the Implication of Its EDED Motif in Mediating the Regulation of Type III Secretion System in EHEC
Cited by: 31
Author(s): Chacko Jobichen, Mo Li, Gal Yerushalmi, Yih Wan Tan, Yu Keung Mok, Ilan Rosenshine, Ka Yin Leung, J. Sivaraman
Software Mentions: 1
Published: about 19 years ago

10.1371/journal.ppat.0040005

Structure and Function of A41, a Vaccinia Virus Chemokine Binding Protein
Cited by: 65
Author(s): Mohammad W. Bahar, Julia C. Kenyon, Mike M. Pütz, Nicola G. A. Abrescia, James E. Pease, Emma L. Wise, David I. Stuart, Geoffrey L. Smith, Jonathan M. Grimes
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.ppat.1000046

The Lentiviral Integrase Binding Protein LEDGF/p75 and HIV-1 Replication
Cited by: 211
Author(s): Alan Engelman, Peter Cherepanov
Software Mentions: 1
Published: over 18 years ago

10.1016/j.redox.2021.101975

Glutaredoxin: Discovery, redox defense and much more
Cited by: 43
Author(s): Fernando T. Ogata, Vasco Branco, Filipa F. Vale, Lucia Coppo
Software Mentions: 1
Published: about 5 years ago

10.1186/1477-7827-9-16

Anti-HSP90 autoantibodies in sera of infertile women identify a dominant, conserved epitope EP6 (380-389) of HSP90 beta protein
Cited by: 15
Author(s): Eusebio S. Pires, Asmita Choudhury, Susan Idicula‐Thomas, Vrinda Khole
Software Mentions: 1
Published: over 15 years ago

10.1186/1477-7827-11-25

Inhibition of ovine in vitro fertilization by anti-Prt antibody: hypothetical model for Prt/ZP interaction
Cited by: 11
Author(s): Jorge Pimenta, João Sardinha, C.C. Marques, Ana Domingos, M.C. Baptista, J.P. Barbas, Ivo C. Martins, Patrı́cia Mesquita, Pedro Pessa, Rui Soares, Aldino Viegas, Eurico J. Cabrita, E M António Horta, Carlos M. G. A. Fontes, A M José Prates, Manuel F. O. Seabra Pereira
Software Mentions: 1
Published: over 13 years ago

10.3390/ijms20061269

Production and Characterization of Recombinant Wild Type Uricase from Indonesian Coelacanth (L. menadoensis) and Improvement of Its Thermostability by In Silico Rational Design and Disulphide Bridges Engineering
Cited by: 12
Author(s): Sakda Yainoy, Thanawat Phuadraksa, Sineewanlaya Wichit, Maprang Sompoppokakul, Napat Songtawee, Virapong Prachayasittikul, Chartchalerm Isarankura‐Na‐Ayudhya
Software Mentions: 1
Published: over 7 years ago

10.21203/rs.3.rs-30374/v1

An in-silico approach to develop of a multi-epitope vaccine candidate against SARS-CoV-2 envelope (E) protein
Cited by: 8
Author(s): Fatemeh Ghafouri, Reza Ahangari Cohan, Farshid Noorbakhsh, Hilda Samimi, Vahid Haghpanah
Software Mentions: 1
Published: about 6 years ago

10.18632/oncotarget.17558

Structural basis of a novel heterodimeric Fc for bispecific antibody production
Cited by: 34
Author(s): Hudie Wei, Haiyan Cai, Yuhao Jin, Pilin Wang, Qingqing Zhang, Yen-Hwei Lin, Weixiao Wang, Jinke Cheng, Naiyan Zeng, Ting Xu, Aiwu Zhou
Software Mentions: 1
Published: about 9 years ago

10.21203/rs.3.rs-49671/v1

Characterizing SARS-CoV-2 mutations in the United States
Cited by: 27
Author(s): Rui Wang, Jiahui Chen, Kaifu Gao, Yuta Hozumi, Changchuan Yin, Guowei Wei
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms20061256

Advances in Antigenic Peptide-Based Vaccine and Neutralizing Antibodies against Viruses Causing Hand, Foot, and Mouth Disease
Cited by: 24
Author(s): Mohd Ishtiaq Anasir, Chit Laa Poh
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.19101

Acetyl-lupeolic acid inhibits Akt signaling and induces apoptosis in chemoresistant prostate cancer cells <i>in vitro</i> and <i>in vivo</i>
Cited by: 15
Author(s): Claudia Schmidt, Cornelia Loos, Lu Jin, Michael Schmiech, Christoph Q. Schmidt, Menna El Gaafary, Tatiana Syrovets, Thomas Simmet
Software Mentions: 1
Published: about 9 years ago

10.34133/2020/1658678

Nonhuman Primate Model of Oculocutaneous Albinism with <i>TYR</i> and <i>OCA2</i> Mutations
Cited by: 8
Author(s): Kun Wu, Ji‐Neng Lv, Hui Yang, Fengmei Yang, Rui Lin, Qiang Lin, Ren‐Juan Shen, Junbin Wang, Wenhua Duan, Min Hu, Jun Zhang, Zhanlong He, Zi‐Bing Jin
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms20081812

Leishmania infantum β-Tubulin Identified by Reverse Engineering Technology through Phage Display Applied as Theranostic Marker for Human Visceral Leishmaniasis
Cited by: 11
Author(s): Lourena E. Costa, Patrícia Terra Alves, Ana Carneiro, Ana Carolina S. Dias, Patrícia Tiemi Fujimura, Glaucy Rodrigues de Araújo, Grasiele S.V. Tavares, Fernanda F. Ramos, Mariana C. Duarte, Daniel Menezes‐Souza, Peter Briza, Fátima F Briza, Eduardo Anton̂io Ferraz Coelho, Luiz Ricardo Goulart
Software Mentions: 1
Published: about 7 years ago

10.1186/1742-4690-4-19

Mutation in the loop C-terminal to the cyclophilin A binding site of HIV-1 capsid protein disrupts proper virus assembly and infectivity
Cited by: 12
Author(s): Samir Abdurahman, Stefan Höglund, Anders Höglund, Anders Vahlne
Software Mentions: 1
Published: over 19 years ago

10.1186/1742-4690-4-69

Characterization of the invariable residue 51 mutations of human immunodeficiency virus type 1 capsid protein on in vitro CA assembly and infectivity
Cited by: 22
Author(s): Samir Abdurahman, Masoud Youssefi, Stefan Höglund, Anders Vahlne
Software Mentions: 1
Published: almost 19 years ago

10.18632/oncotarget.18070

Lysine methylation of FEN1 by SET7 is essential for its cellular response to replicative stress
Cited by: 11
Author(s): Palaniraja Thandapani, Anthony M. Couturier, Zhenbao Yu, Xing Li, Jean-François Couture, Shawn Li, Jean–Yves Masson, Stéphane Richard
Software Mentions: 1
Published: about 9 years ago

10.1186/1742-4690-7-58

A single amino acid substitution of the human immunodeficiency virus type 1 capsid protein affects viral sensitivity to TRIM5α
Cited by: 25
Author(s): Ayumu Kuroishi, Katarzyna Bożek, Tatsuo Shioda, Emi E. Nakayama
Software Mentions: 1
Published: about 16 years ago

10.1186/1742-4690-8-78

Lack of adaptation to human tetherin in HIV-1 Group O and P
Cited by: 48
Author(s): Su Jung Yang, Lisa A. Lopez, Colin M. Exline, Kevin G. Haworth, Paula M. Cannon
Software Mentions: 1
Published: almost 15 years ago

10.1186/1742-4690-8-101

The prototype HIV-1 maturation inhibitor, bevirimat, binds to the CA-SP1 cleavage site in immature Gag particles
Cited by: 62
Author(s): Angeline Nguyen, Christa L. Feasley, Ken W. Jackson, Theodore J. Nitz, Karl Salzwedel, Gillian M. Air, Michael Sakalian
Software Mentions: 1
Published: over 14 years ago

10.1186/1742-4690-9-36

MiniCD4 protein resistance mutations affect binding to the HIV-1 gp120 CD4 binding site and decrease entry efficiency
Cited by: 18
Author(s): Katrijn Grupping, Philippe Selhorst, Johan Míchiels, Katleen Vereecken, Leo Heyndríckx, Pascal Kessler, Guido Vanham, Loı̈c Martin, Kevin K. Ariën
Software Mentions: 1
Published: about 14 years ago

10.1186/1742-4690-10-14

A systematic study of the N-glycosylation sites of HIV-1 envelope protein on infectivity and antibody-mediated neutralization
Cited by: 100
Author(s): Wenbo Wang, Jianhui Nie, Courtney Prochnow, Carolyn Truong, Jiajun Zheng, Suting Wang, Xiaojiang S. Chen, Youchun Wang
Software Mentions: 1
Published: over 13 years ago

10.1186/1742-4690-10-65

Hypersusceptibility mechanism of Tenofovir-resistant HIV to EFdA
Cited by: 34
Author(s): Eleftherios Michailidis, Emily M. Ryan, Atsuko Hachiya, Karen A. Kirby, Bruno Marchand, Maxwell D. Leslie, Andrew D. Huber, Yee Tsuey Ong, Jacob C. Jackson, Kamalendra Singh, Eiichi Kodama, Hiroaki Mitsuya, Michael A. Parniak, Stefan G. Sarafianos
Software Mentions: 1
Published: about 13 years ago

10.1042/BCJ20160257

EssC: domain structures inform on the elusive translocation channel in the Type VII secretion system
Cited by: 42
Author(s): Martin Zoltner, Wui M.A.V. Ng, Jillian J. Money, Paul K. Fyfe, Holger Kneuper, Tracy Palmer, William N. Hunter
Software Mentions: 1
Published: about 10 years ago

10.3390/ijms20081864

Characterization and Dye Decolorization Potential of Two Laccases from the Marine-Derived Fungus Pestalotiopsis sp.
Cited by: 27
Author(s): Saowanee Wikee, Juliette Hatton, Annick Turbé-Doan, Yann Mathieu, Mariane Daou, Anne Lomascolo, Abhishek Kumar, Saisamorn Lumyong, Giuliano Sciara, Craig B. Faulds, Éric Record
Software Mentions: 1
Published: about 7 years ago

10.1186/1742-4690-10-77

Heterogeneous susceptibility of circulating SIV isolate capsids to HIV-interacting factors
Cited by: 26
Author(s): João I. Mamede, Marc Sitbon, Jean-Luc Battini, Valérie Courgnaud
Software Mentions: 1
Published: almost 13 years ago

10.1186/1742-4690-11-24

Structural basis for the inhibition of HIV-1 Nef by a high-affinity binding single-domain antibody
Cited by: 18
Author(s): Sebastian Lülf, Julie Matz, Marie‐Christine Rouyez, Annika Järviluoma, Kalle Saksela, Serge Bénichou, Matthias Geyer
Software Mentions: 1
Published: over 12 years ago

10.1186/1742-4690-11-38

Switching and emergence of CTL epitopes in HIV-1 infection
Cited by: 13
Author(s): Chungyong Han, Ai Kawana-Tachikawa, Akihisa Shimizu, Dayong Zhu, Hitomi Nakamura, Eisuke Adachi, Tadashi Kimura, Michiko Koga, Tomohiko Koibuchi, George F. Gao, Yusuke Sato, Atsushi Yamagata, Eric S. Martin, Shuya Fukai, Zabrina L. Brumme, Aikichi Iwamoto
Software Mentions: 1
Published: about 12 years ago

10.1186/s12977-014-0079-7

HIV-1 Gag C-terminal amino acid substitutions emerging under selective pressure of protease inhibitors in patient populations infected with different HIV-1 subtypes
Cited by: 12
Author(s): Guangdi Li, Jens Verheyen, Kristof Theys, Supinya Piampongsant, Kristel Van Laethem, Anne‐Mieke Vandamme
Software Mentions: 1
Published: almost 12 years ago

10.1186/1742-4690-10-144

Dual inhibition of HIV-1 replication by integrase-LEDGF allosteric inhibitors is predominant at the post-integration stage
Cited by: 106
Author(s): Erwann Le Rouzic, Damien Bonnard, Sophie Chasset, Jean-Michel Bruneau, Francis Chevreuil, Frédéric Le Strat, Juliette Nguyen, Roxane Beauvoir, Céline Amadori, Julie Brias, Sophie Vomscheid, Sylvia Eiler, Nicolas Lévy, Olivier Delelis, Eric Deprez, Ali Saı̈b, Alessia Zamborlini, Stéphane Emiliani, Marc Ruff, Benoît Ledoussal, F. Moreau, Richard Bénarous
Software Mentions: 1
Published: over 12 years ago

10.3390/ijms20092231

Molecular and Structural Basis of the Proteasome α Subunit Assembly Mechanism Mediated by the Proteasome-Assembling Chaperone PAC3-PAC4 Heterodimer
Cited by: 14
Author(s): Tadashi Satoh, Maho Yagi-Utsumi, Kenta Okamoto, Eiji Kurimoto, Keiji Tanaka, Koichi Kato
Software Mentions: 1
Published: about 7 years ago

10.6026/97320630013054

Annotation of gene sequence and protein structure of brinjal EDS1
Cited by: 2
Author(s): Soumya Sharma, Sarika Jaiswal, Sunil Archak
Software Mentions: 1
Published: over 9 years ago

10.1186/s12977-015-0194-0

Determinants in HIV-2 Env and tetherin required for functional interaction
Cited by: 6
Author(s): Colin M. Exline, Su Jung Yang, Kevin G. Haworth, Srinivas Rengarajan, Lisa A. Lopez, Magali E. Droniou, Eduardo Seclén, Paula M. Cannon
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12977-016-0291-8

Mutagenesis of N-terminal residues of feline foamy virus Gag reveals entirely distinct functions during capsid formation, particle assembly, Gag processing and budding
Cited by: 5
Author(s): Yang Liu, Matthew J. Betts, Janet Lei-Rossmann, Guochao Wei, Qiuying Bao, Timo Kehl, Robert B. Russell, Martin Löchelt
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12977-018-0414-5

New World feline APOBEC3 potently controls inter-genus lentiviral transmission
Cited by: 7
Author(s): Yoriyuki Konno, Sumiharu Nagaoka, Izumi Kimura, Keisuke Yamamoto, Yumiko Kagawa, Ryuichi Kumata, Hirofumi Aso, Mahoko Takahashi Ueda, So Nakagawa, Tomoko Kobayashi, Yoshio Koyanagi, Kei Sato
Software Mentions: 1
Published: about 8 years ago

10.1186/s12977-018-0432-3

Myricetin antagonizes semen-derived enhancer of viral infection (SEVI) formation and influences its infection-enhancing activity
Cited by: 14
Author(s): Ruxia Ren, Sha Yin, B. Lai, Lingzhen Ma, Jiayong Wen, Xuanxuan Zhang, Fangyuan Lai, Shuwen Liu, Lin Li
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12284-020-00448-7

Exploring Natural Allelic Variations of the β-Triketone Herbicide Resistance Gene HIS1 for Application in indica Rice and Particularly in Two-Line Hybrid Rice
Cited by: 2
Author(s): Qiming Lv, Xiuli Zhang, Dingyang Yuan, Zhiyuan Huang, Rui Peng, Jiming Peng, Zuren Li, Li Tang, Ducai Liu, Xiaomao Zhou, Lifeng Wang, Lang Pan, Ye Shao, Bigang Mao, Yeyun Xin, Lihuang Zhu, Baisuo Zhao, Lianyang Bai
Software Mentions: 1
Published: over 5 years ago

10.1186/s12284-021-00499-4

Comparisons within the Rice GA 2-Oxidase Gene Family Revealed Three Dominant Paralogs and a Functional Attenuated Gene that Led to the Identification of Four Amino Acid Variants Associated with GA Deactivation Capability
Cited by: 4
Author(s): Kun‐Ting Hsieh, Yi-Ting Chen, Ting-Jen Hu, Shu‐Yuan Lin, Cheng-Yu Hsieh, Su-Hui Liu, Shiau-Yu Shiue, Shuen‐Fang Lo, I-Wen Wang, Chiu‐yu Tseng, Liang-Jwu Chen
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms20092143

Biochemical Characterization of a New β-Agarase from Cellulophaga Algicola
Cited by: 10
Author(s): Zhenggang Han, Yuxi Zhang, Jiangke Yang
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms20092274

Hidden Aggregation Hot-Spots on Human Apolipoprotein E: A Structural Study
Cited by: 8
Author(s): Paraskevi L. Tsiolaki, Aikaterini D. Katsafana, Fotis A. Baltoumas, Nikolaos Louros, Vassiliki A. Iconomidou
Software Mentions: 1
Published: about 7 years ago

10.6026/97320630017011

Molecular docking analysis of azithromycin and hydroxychloroquine with spike surface glycoprotein of SARS-CoV-2
Cited by: 4
Author(s): Jitender Singh
Software Mentions: 1
Published: over 5 years ago

10.1126/sciadv.aat7052

Crystal structure of rhodopsin in complex with a mini-G _o sheds light on the principles of G protein selectivity
Cited by: 61
Author(s): Ching‐Ju Tsai, Filip Pamula, Rony Nehmé, Jonas Mühle, T. Weinert, Tilman Flock, Przemyslaw Nogly, Patricia C. Edwards, Byron Carpenter, Thomas Gruhl, Pikyee Ma, Xavier Deupí, Jörg Standfuss, Christopher G. Tate, Gebhard F. X. Schertler
Software Mentions: 1
Published: almost 8 years ago

10.1126/sciadv.aau1199

The IgM pentamer is an asymmetric pentagon with an open groove that binds the AIM protein
Cited by: 74
Author(s): Emiri Hiramoto, Akihisa Tsutsumi, Risa Suzuki, Shigeru Matsuoka, Satoko Arai, Masahide Kikkawa, Toru Miyazaki
Software Mentions: 1
Published: almost 8 years ago

10.1126/sciadv.aau6769

HIV-1 vaccine design through minimizing envelope metastability
Cited by: 65
Author(s): Linling He, Sonu Kumar, Joel D. Allen, Deli Huang, Xue Lin, Colin Mann, Karen L. Saye-Francisco, Jeffrey Copps, Achyut Sarkar, Gabrielle S Blizard, Gabriel Ozorowski, Devin Sok, Max Crispin, Andrew B. Ward, David Nemazee, Dennis R. Burton, Ian A. Wilson, Jiang Zhu
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms20092284

Characterizing a Halo-Tolerant GH10 Xylanase from Roseithermus sacchariphilus Strain RA and Its CBM-Truncated Variant
Cited by: 24
Author(s): Seng Chong Teo, Kok Jun Liew, Mohd Shahir Shamsir, Chun Shiong Chong, Neil C. Bruce, Kok‐Gan Chan, Kian Mau Goh
Software Mentions: 1
Published: about 7 years ago

10.1126/sciadv.aaw1567

Olanzapine: A potent agonist at the hM4D(Gi) DREADD amenable to clinical translation of chemogenetics
Cited by: 42
Author(s): Mikail Weston, Teresa Kaserer, Angela Wu, Alexandre Mouravlev, Jenna C. Carpenter, Albert Snowball, Samuel Knauß, Melanie von Schimmelmann, Matthew J. During, Gabriele Lignani, Stephanie Schorge, Deborah Young, Dimitri M. Kullmann, Andreas Lieb
Software Mentions: 1
Published: over 7 years ago

10.6026/97320630013241

Naturally occurring capsid protein variants L1 of human papillomavirus genotype 16 in Morocco
Cited by: 6
Author(s): Aissam El-Aliani, My Abdelaziz El Alaoui, Imane Chaoui, My Mustapha Ennaji, Mohammed Attaleb, Mohammed El Mzibri
Software Mentions: 1
Published: almost 9 years ago

10.1126/sciadv.aav7574

Asymmetry in catalysis by <i>Thermotoga maritima</i> membrane-bound pyrophosphatase demonstrated by a nonphosphorus allosteric inhibitor
Cited by: 13
Author(s): Keni Vidilaseris, Alexandros Kiriazis, Ainoleena Turku, Ayman Khattab, Niklas G. Johansson, Teppo O. Leino, Paula Kiuru, Gustav Boije af Gennäs, Seppo Meri, Jari Yli‐Kauhaluoma, Henri Xhaard, Adrian Goldman
Software Mentions: 1
Published: about 7 years ago

10.1126/sciadv.aax1803

Dimeric structures of quinol-dependent nitric oxide reductases (qNORs) revealed by cryo–electron microscopy
Cited by: 14
Author(s): Chai Gopalasingam, Rachel M. Johnson, George N. Chiduza, Takehiko Tosha, Masaki Yamamoto, Yoshitsugu Shiro, S.V. Antonyuk, Stephen P. Muench, S.S. Hasnain
Software Mentions: 1
Published: almost 7 years ago

10.1126/sciadv.aax3567

Human adenovirus type 26 uses sialic acid–bearing glycans as a primary cell entry receptor
Cited by: 62
Author(s): Alex Baker, R.M. Mundy, James A. Davies, P.J. Rizkallah, Alan L. Parker
Software Mentions: 1
Published: almost 7 years ago

10.1126/sciadv.aax3641

RNA binding activates RIG-I by releasing an autorepressed signaling domain
Cited by: 13
Author(s): Thayne H. Dickey, Brian Song, Anna Marie Pyle
Software Mentions: 1
Published: almost 7 years ago

10.6026/97320630016375

Towards the design of epitope candidates for Coronavirus 2
Cited by: 4
Author(s): Hasanain Abdulhameed Odhar
Software Mentions: 1
Published: about 6 years ago

10.1126/sciadv.aay6415

The structure of Photosystem I acclimated to far-red light illuminates an ecologically important acclimation process in photosynthesis
Cited by: 43
Author(s): Christopher J. Gisriel, Gaozhong Shen, Vasily Kurashov, Ming Yang Ho, Shangji Zhang, Dewight Williams, John H. Golbeck, Petra Fromme, Donald A. Bryant
Software Mentions: 1
Published: over 6 years ago

10.1126/sciadv.aax5783

Stitching the synapse: Cross-linking mass spectrometry into resolving synaptic protein interactions
Cited by: 71
Author(s): Miguel A. Gonzalez‐Lozano, Frank Koopmans, Patrick F. Sullivan, Jonas Protze, Gerd Krause, Matthijs Verhage, K. W. Li, Fan Liu, August B. Smit
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms20092291

Molecular Characterization, Bioinformatic Analysis, and Expression Profile of Lin-28 Gene and Its Protein from Arabian Camel (Camelus dromedarius)
Cited by: 3
Author(s): Sultan N. Alharbi, Ibtehal S. Alduhaymi, Lama Alqahtani, Musaad A. Altammaami, Fahad M. Alhoshani, Deema K Alrabiah, Saleh O. Alyemni, Khulud A. Alsulami, Waleed Alghamdi, Mohannad Fallatah
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms20102460

Structural Insights into the Molecular Evolution of the Archaeal Exo-β-d-Glucosaminidase
Cited by: 2
Author(s): Shouhei Mine, Masahiro Watanabe
Software Mentions: 1
Published: about 7 years ago

10.1126/sciadv.abb5924

Small-molecule sequestration of amyloid-β as a drug discovery strategy for Alzheimer’s disease
Cited by: 81
Author(s): Gabriella T. Heller, Francesco A. Aprile, Thomas C. T. Michaels, Ryan Limbocker, Michele Perni, Francesco Simone Ruggeri, Benedetta Mannini, Thomas Löhr, Massimiliano Bonomi, Carlo Camilloni, Alfonso De Simone, Isabella C. Felli, Roberta Pierattelli, Tuomas P. J. Knowles, Christopher M. Dobson
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms20102572

Physiological, Structural, and Functional Analysis of the Paralogous Cation–Proton Antiporters of NhaP Type from Vibrio cholerae
Cited by: 8
Author(s): Muntahi Mourin, Alvan Wai, Joe D. J. OʼNeil, Georg Hausner, Pavel Dibrov
Software Mentions: 1
Published: about 7 years ago

10.1126/sciadv.abg4403

Crystal structure of ADAMTS13 CUB domains reveals their role in global latency
Cited by: 20
Author(s): H. J. Kim, Yingqi Xu, Anastasis Petri, Karen Vanhoorelbeke, James T. B. Crawley, Jonas Emsley
Software Mentions: 1
Published: about 5 years ago

10.1126/sciadv.abf6744

Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping
Cited by: 9
Author(s): M.A. Marquez-Monino, Raquel Ortega-García, Megan L. Shipton, Elsa Franco-Echevarría, Andrew M. Riley, J. Sanz‐Aparicio, Barry V. L. Potter, Beatriz González
Software Mentions: 1
Published: about 5 years ago

10.1126/sciadv.abg4000

Cork-in-bottle mechanism of inhibitor binding to mammalian complex I
Cited by: 31
Author(s): Injae Chung, Riccardo Serreli, Jason B. Cross, Maria Emilia Di Francesco, Joseph R. Marszalek, Judy Hirst
Software Mentions: 1
Published: about 5 years ago

10.1126/sciadv.abf8864

Cryo-EM structure of the photosynthetic RC-LH1-PufX supercomplex at 2.8-Å resolution
Cited by: 27
Author(s): Laura Bracun, Atsushi Yamagata, Bern M. Christianson, Tohru Terada, Daniel P. Canniffe, Mikako Shirouzu, Luning Liu
Software Mentions: 1
Published: about 5 years ago

10.1126/sciadv.abi6856

Rare genetic variability in human drug target genes modulates drug response and can guide precision medicine
Cited by: 14
Author(s): Yitian Zhou, Gabriel Herras Arribas, Ainoleena Turku, Tuuli Jürgenson, Souren Mkrtchian, Kristi Krebs, Yì Wáng, Barbora Svobodová, Lili Milani, Gunnar Schulte, Jan Korábečný, Stefano Gastaldello, Volker M. Lauschke
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41597-020-00652-6

Structural models of human ACE2 variants with SARS-CoV-2 Spike protein for structure-based drug design
Cited by: 23
Author(s): Marija Sorokina, João M.C. Teixeira, Susana Barrera-Vilarmau, Ralf Paschke, Ioannis Papasotiriou, João P. G. L. M. Rodrigues, Panagiotis L. Kastritis
Software Mentions: 1
Published: almost 6 years ago

10.1126/sciimmunol.aao1384

A molecular basis of human T cell receptor autoreactivity toward self-phospholipids
Cited by: 36
Author(s): Adam Shahine, Ildiko Van Rhijn, Tan-Yun Cheng, Sarah K. Iwany, Stéphanie Gras, D. Branch Moody, Jamie Rossjohn
Software Mentions: 1
Published: over 8 years ago

10.1038/srep02318

Towards a better understanding of the novel avian-origin H7N9 influenza A virus in China
Cited by: 18
Author(s): Yongbo Wang, Zhangyan Dai, Han Cheng, Zexian Liu, Zhicheng Pan, Wankun Deng, Tianshun Gao, Xiaotong Li, Yuangen Yao, Jian Ren, Yu Xue
Software Mentions: 1
Published: almost 13 years ago

10.1038/srep04942

High-throughput profiling of influenza A virus hemagglutinin gene at single-nucleotide resolution
Cited by: 135
Author(s): Nicholas C. Wu, Arthur P. Young, Laith Q. Al‐Mawsawi, C. Anders Olson, Jun Feng, Hangfei Qi, Shu Hwa Chen, I-Hsuan Lu, Chung Yen Lin, Robert Chin, Harding H. Luan, Nguyen Nguyen, Stanley F. Nelson, Xinmin Li, Ting Wu, Ren Sun
Software Mentions: 1
Published: about 12 years ago

10.1038/srep04965

Selective Small Molecule Compounds Increase BMP-2 Responsiveness by Inhibiting Smurf1-mediated Smad1/5 Degradation
Cited by: 58
Author(s): Ya Cao, Cheng Wang, Xueli Zhang, Guichun Xing, Kefeng Lu, Yongqing Gu, Fuchu He, Lingqiang Zhang
Software Mentions: 1
Published: about 12 years ago

10.3390/ijms20112643

Transcriptome Analysis of Clinopodium chinense (Benth.) O. Kuntze and Identification of Genes Involved in Triterpenoid Saponin Biosynthesis
Cited by: 9
Author(s): Yuanyuan Shi, Shengxiang Zhang, Daiyin Peng, Chenkai Wang, Derui Zhao, Kelong Ma, Jiawen Wu, Luqi Huang
Software Mentions: 1
Published: about 7 years ago

10.1038/srep07322

Structural insight into substrate recognition by the endoplasmic reticulum folding-sensor enzyme: crystal structure of third thioredoxin-like domain of UDP-glucose:glycoprotein glucosyltransferase
Cited by: 34
Author(s): Tong Zhu, Tadashi Satoh, Koichi Kato
Software Mentions: 1
Published: over 11 years ago

10.1038/srep08026

Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway
Cited by: 561
Author(s): Joana S. Fraga, Ana Maranha, V. Mendes, Pedro José Barbosa Pereira, Nuno Empadinhas, Sandra Macedo-Ribeiro
Software Mentions: 1
Published: over 11 years ago

10.1038/srep08361

A Ligand-observed Mass Spectrometry Approach Integrated into the Fragment Based Lead Discovery Pipeline
Cited by: 28
Author(s): Xin Chen, Shanshan Qin, Shuai Chen, Jinxin Li, Lixin Li, Zhongling Wang, Quan Wang, Jianping Lin, Cheng Yang, Shui Wang
Software Mentions: 1
Published: over 11 years ago

10.3390/ijms20112689

Luteolin-7-O-β-d-Glucoside Inhibits Cellular Energy Production Interacting with HEK2 in Keratinocytes
Cited by: 15
Author(s): Ramona Palombo, Sabrina Caporali, Mattia Falconi, Federico Iacovelli, Blasco Morozzo della Rocca, Alessandro Lo Surdo, Elena Campione, Eleonora Candi, Gerry Melino, Sergio Bernardini, Alessandro Terrinoni
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms20122962

Analysis of the TP53 Deleterious Single Nucleotide Polymorphisms Impact on Estrogen Receptor Alpha-p53 Interaction: A Machine Learning Approach
Cited by: 8
Author(s): Kumaraswamy Naidu Chitrala, Mitzi Nagarkatti, Prakash Nagarkatti, Y. Suneetha
Software Mentions: 1
Published: about 7 years ago

10.1038/srep08769

Structure of human dipeptidyl peptidase 10 (DPPY): a modulator of neuronal Kv4 channels
Cited by: 24
Author(s): G.A. Bezerra, E. Dobrovetsky, A. Seitova, Sofiya Fedosyuk, Sirano Dhe‐Paganon, Karl Gruber
Software Mentions: 1
Published: over 11 years ago

10.3390/ijms20133184

Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase from Streptomyces griseoflavus Ac-993
Cited by: 18
Author(s): А.Г. Габдулхаков, Ilya Kolyadenko, Olga Kostareva, Alisa Mikhaylina, Paulo Oliveira, Paula Tamagnini, A. V. Lisov, Svetlana Tishchenko
Software Mentions: 1
Published: about 7 years ago

10.1038/srep09375

Enhanced photocurrent production by bio-dyes of photosynthetic macromolecules on designed TiO2 film
Cited by: 54
Author(s): Daoyong Yu, Mengfei Wang, Guangpu Zhu, Baosheng Ge, Shuang Liu, Fang Huang
Software Mentions: 1
Published: over 11 years ago

10.1038/srep09449

Structure and function of a Clostridium difficile sortase enzyme
Cited by: 22
Author(s): Christopher J. Chambers, April K. Roberts, Clifford C. Shone, K. Ravi Acharya
Software Mentions: 1
Published: over 11 years ago

10.1038/srep09641

Ryanodine receptors are targeted by anti-apoptotic Bcl-XL involving its BH4 domain and Lys87 from its BH3 domain
Cited by: 30
Author(s): Tim Vervliet, Irma Lemmens, Elien Vandermarliere, Elke Decrock, Hristina Ivanova, Giovanni Monaco, Vincenzo Sorrentino, Nael Nadif Kasri, Ludwig Missiaen, Lennart Martens, Humbert De Smedt, Luc Leybaert, Jan B. Parys, Jan Tavernier, Geert Bultynck
Software Mentions: 1
Published: about 11 years ago

10.3390/ijms20143477

Biomolecules of 2-Thiouracil, 4-Thiouracil and 2,4-Dithiouracil: A DFT Study of the Hydration, Molecular Docking and Effect in DNA:RNAMicrohelixes
Cited by: 7
Author(s): M. Alcolea Palafox, A. Milton Franklin Benial, V. K. Rastogi
Software Mentions: 1
Published: almost 7 years ago

10.1038/srep10447

Structural and functional characterization of a novel scFv anti-HSP60 of Strongyloides sp.
Cited by: 16
Author(s): Marcelo Arantes Levenhagen, Francisco Abad Santos, Patrícia Tiemi Fujimura, Ana Paula Caneiro, Julia Maria Costa‐Cruz, Luiz Ricardo Goulart
Software Mentions: 1
Published: about 11 years ago

10.3390/ijms20143530

Characterization of the First Bacterial and Thermostable GDP-Mannose 3,5-Epimerase
Cited by: 13
Author(s): Ophelia Gevaert, Stevie Van Overtveldt, Koen Beerens, Tom Desmet
Software Mentions: 1
Published: almost 7 years ago

10.1038/srep11581

Structural and Physical Basis for Anti-IgE Therapy
Cited by: 40
Author(s): Jon D. Wright, Hsing-Mao Chu, Chun‐Hsiang Huang, Che Ma, Tse Wen Chang, Carmay Lim
Software Mentions: 1
Published: about 11 years ago

10.1038/srep11629

Highly homologous proteins exert opposite biological activities by using different interaction interfaces
Cited by: 10
Author(s): Anat Amir, Martijn van Rosmalen, Guy Mayer, Mario Lebendiker, Tsafi Danieli, Assaf Friedler
Software Mentions: 1
Published: about 11 years ago

10.1038/srep11648

Molecular evolution of haemagglutinin (H) gene in measles virus
Cited by: 32
Author(s): Hirokazu Kimura, Masaaki Saitoh, Miho Kobayashi, Haruyuki Ishii, Takeshi Saraya, Daisuke Kurai, Hiroyuki Tsukagoshi, Komei Shirabe, Atsuyoshi Nishina, Kunihisa Kozawa, Makoto Kuroda, Fumihiko Takeuchi, Tsuyoshi Sekizuka, Hisanori Minakami, Akihide Ryo, Makoto Takeda
Software Mentions: 1
Published: about 11 years ago

10.1038/srep10270

Optimizing fluorescent protein trios for 3-Way FRET imaging of protein interactions in living cells
Cited by: 21
Author(s): Brandon L. Scott, Adam D. Hoppe
Software Mentions: 1
Published: about 11 years ago

10.3390/ijms20143602

The Role of Cysteine Cathepsins in Cancer Progression and Drug Resistance
Cited by: 71
Author(s): Magdalena Rudzińska, Alessandro Parodi, Surinder M. Soond, А.З. Винаров, Dmitry Korolev, Andrey Morozov, Cenk Dağlıoğlu, Yusuf Tutar, Andrey A. Zamyatnin
Software Mentions: 1
Published: almost 7 years ago

10.3390/ijms20143382

Epileptic Encephalopathy In A Patient With A Novel Variant In The Kv7.2 S2 Transmembrane Segment: Clinical, Genetic, and Functional Features
Cited by: 11
Author(s): Maria Virginia Soldovieri, Paolo Ambrosino, Ilaria Mosca, Francesco Miceli, Cristina Franco, Lorella M.T. Canzoniero, Beth M. Kline‐Fath, Edward C. Cooper, Charu Venkatesan, Maurizio Taglialatela
Software Mentions: 1
Published: almost 7 years ago

10.1038/srep11674

Crystal Structures of a Hyperthermophilic Archaeal Homoserine Dehydrogenase Suggest a Novel Cofactor Binding Mode for Oxidoreductases
Cited by: 14
Author(s): Junji Hayashi, Shota Inoue, Kwang Jin Kim, Kazunari Yoneda, Yutaka Kawarabayasi, Toshihisa Ohshima, Haruhiko Sakuraba
Software Mentions: 1
Published: about 11 years ago

10.1038/srep12052

Ortho-methylated 3-hydroxypyridines hinder hen egg-white lysozyme fibrillogenesis
Cited by: 16
Author(s): Luca Marino, Kris Pauwels, Rodrigo Casasnovas, Pilar Sanchís, Bartolomé Vilanova, Francisco Muñoz, Josefa Donoso, Miquel Adrover
Software Mentions: 1
Published: almost 11 years ago