10.3389/fvets.2020.00047

Identification of Linear B-Cell Epitopes on Hemagglutinin Protein of Canine Distemper Virus Using Two Monoclonal Antibodies
Cited by: 4
Author(s): Pengfei Shi, Zhigang Cao, Yuhua Cheng, Shipeng Cheng, Li Yi
Software Mentions: 1
Published: over 6 years ago

10.4155/fmc.15.104

Pteridine-2,4-diamine derivatives as radical scavengers and inhibitors of lipoxygenase that can possess anti-inflammatory properties
Cited by: 15
Author(s): Eleni Pontiki, Dimitra Hadjipavlou‐Litina, Alexandros Patsilinakos, Trang M. Tran, Charles M. Marson
Software Mentions: 1
Published: almost 11 years ago

10.4155/fsoa-2017-0075

Dual inhibitors of hepatitis C virus and hepatocellular carcinoma: design, synthesis and docking studies
Cited by: 6
Author(s): Mostafa M.M. El-Miligy, S. M. Rida, F. A. Ashour, Mona H. Badr, Ehab M El-Bassiony, Maha El-Demellawy, Ashraf M. Omar
Software Mentions: 1
Published: over 8 years ago

10.2217/fvl-2020-0269

Scouting the receptor-binding domain of SARS coronavirus 2: a comprehensive immunoinformatics inquisition
Cited by: 5
Author(s): Zaira Rehman, Ammad Fahim, Muhammad Faraz Bhatti
Software Mentions: 1
Published: over 5 years ago

10.2217/fvl-2020-0099

Possible SARS-coronavirus 2 inhibitor revealed by simulated molecular docking to viral main protease and host toll-like receptor
Cited by: 40
Author(s): Xiaopeng Hu, Xin Cai, Xun Song, Chenyang Li, Jiuliang Zhao, Wei Luo, Qian Zhang, Ivo Otte Ekumi, Zhendan He
Software Mentions: 1
Published: about 6 years ago

10.2217/fvl-2020-0233

Targeting SARS-CoV-2 nonstructural protein 15 endoribonuclease: an<i>in silico</i>perspective
Cited by: 8
Author(s): Shafi Mahmud, Abdo A. Elfiky, Al Amin, Sumon Chandro Mohanto, Ekhtiar Rahman, Uzzal Kumar Acharjee, Abu Saleh
Software Mentions: 1
Published: about 5 years ago

10.2217/fvl-2020-0342

Exploring the binding efficacy of ivermectin against the key proteins of SARS-CoV-2 pathogenesis: an <i>in silico</i> approach
Cited by: 41
Author(s): Abhigyan Choudhury, Nabarun Chandra Das, Ritwik Patra, Manojit Bhattacharya, Pratik Ghosh, Bidhan Chandra Patra, Suprabhat Mukherjee
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.111.000968

Amino Acid Substitutions in the <i>Caenorhabditis elegans</i> RNA Polymerase II Large Subunit AMA-1/RPB-1 that Result in α-Amanitin Resistance and/or Reduced Function
Cited by: 5
Author(s): Elizabeth A. Bowman, Donald L Riddle, William G. Kelly
Software Mentions: 1
Published: over 14 years ago

10.1534/g3.112.004531

RNA Polymerase II Mutations Conferring Defects in Poly(A) Site Cleavage and Termination in Saccharomyces cerevisiae
Cited by: 6
Author(s): Charles E. Kubicek, R. D. Chisholm, Sachiko Takayama, Diane K. Hawley
Software Mentions: 1
Published: over 13 years ago

10.1534/g3.115.017376

A Systematic Mutational Analysis of a Histone H3 Residue in Budding Yeast Provides Insights into Chromatin Dynamics
Cited by: 10
Author(s): Paige Johnson, Virginia Mitchell, Kelsi McClure, Martha Kellems, Sarah Marshall, M. Kathryn Allison, Harrison Lindley, Hoai-Trang T. Nguyen, Jessalyn E. Tackett, Andrea A. Duina
Software Mentions: 1
Published: about 11 years ago

10.1534/g3.118.200288

The Pseudokinase Domain of <i>Saccharomyces cerevisiae</i> Tra1 Is Required for Nuclear Localization and Incorporation into the SAGA and NuA4 Complexes
Cited by: 13
Author(s): Matthew D. Berg, Julie Genereaux, Jim Karagiannis, Christopher J. Brandl
Software Mentions: 1
Published: about 8 years ago

10.1534/g3.119.400227

Negative Regulation of the Mis17-Mis6 Centromere Complex by mRNA Decay Pathway and EKC/KEOPS Complex in Schizosaccharomyces pombe
Cited by: 0
Author(s): Xingya Xu, Norihiko Nakazawa, Li Wang, Orie Arakawa, Mitsuhiro Yanagida
Software Mentions: 1
Published: about 7 years ago

10.1534/g3.120.401644

RPL-4 and RPL-9 ̶Mediated Ribosome Purifications Facilitate the Efficient Analysis of Gene Expression in <i>Caenorhabditis elegans</i> Germ Cells
Cited by: 1
Author(s): Marco Nousch
Software Mentions: 1
Published: over 5 years ago

10.1093/g3journal/jkab111

Experimental exchange of paralogous domains in the MLH family provides evidence of sub-functionalization after gene duplication
Cited by: 2
Author(s): Christopher M Furman, Ryan Elbashir, Gianno Pannafino, Nathan L. Clark, Eric Alani
Software Mentions: 1
Published: about 5 years ago

10.3390/gels5010010

Calcium-Dependent RTX Domains in the Development of Protein Hydrogels
Cited by: 2
Author(s): Beyza Bulutoglu, Scott Banta
Software Mentions: 1
Published: over 7 years ago

10.3390/gels7020052

Bolaamphiphilic Bis-Dehydropeptide Hydrogels as Potential Drug Release Systems
Cited by: 6
Author(s): Carolina Amorim, Sérgio Rafael Silva Veloso, Elisabete M. S. Castanheira, L. Hilliou, Renato B. Pereira, Paula B. Andrade, José A. Martins, P. J. Jervis, Paula M. T. Ferreira
Software Mentions: 1
Published: about 5 years ago

10.3390/genes6030751

Chromatin Dynamics in Vivo: A Game of Musical Chairs
Cited by: 32
Author(s): Daniël P. Melters, Jonathan Nye, Haiqing Zhao, Yamini Dalal
Software Mentions: 1
Published: almost 11 years ago

10.3390/genes6041113

How Porin Heterogeneity and Trade-Offs Affect the Antibiotic Susceptibility of Gram-Negative Bacteria
Cited by: 21
Author(s): Thomas Ferenci, Katherine Phan
Software Mentions: 1
Published: over 10 years ago

10.3390/genes9040183

Genome-Wide Identification of the Alba Gene Family in Plants and Stress-Responsive Expression of the Rice Alba Genes
Cited by: 16
Author(s): Jitendra Kumar Verma, Vijay Wardhan, Deepali Singh, Subhra Chakraborty, Niranjan Chakraborty
Software Mentions: 1
Published: over 8 years ago

10.3390/genes9080386

Structural and Evolutionary Insights within the Polysaccharide Deacetylase Gene Family of Bacillus anthracis and Bacillus cereus
Cited by: 13
Author(s): Athena Andreou, Petros Giastas, Elias Christoforides, Elias Eliopoulos
Software Mentions: 1
Published: almost 8 years ago

10.3390/genes9080416

Maneuvers on PCNA Rings during DNA Replication and Repair
Cited by: 53
Author(s): Dea Slade
Software Mentions: 1
Published: almost 8 years ago

10.3390/genes10030203

Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey
Cited by: 11
Author(s): Junmin Xu, Yanping Li, Yunyun Lv, Chao Bian, Xinxin You, Daiji Endoh, Hiroki Teraoka, Qiong Shi
Software Mentions: 1
Published: over 7 years ago

10.3390/genes10040312

Novel Molecular Signatures in the PIP4K/PIP5K Family of Proteins Specific for Different Isozymes and Subfamilies Provide Important Insights into the Evolutionary Divergence of this Protein Family
Cited by: 9
Author(s): Bijendra Khadka, Radhey S. Gupta
Software Mentions: 1
Published: about 7 years ago

10.3390/genes10060441

A Wheat β-Patchoulene Synthase Confers Resistance against Herbivory in Transgenic Arabidopsis
Cited by: 4
Author(s): Qingyu Pu, Liang Jin, Qing Shen, Jingye Fu, Zhien Pu, Xuegui Wang, Qiang Wang
Software Mentions: 1
Published: about 7 years ago

10.3390/genes10100739

Genomic Analyses Identify Novel Molecular Signatures Specific for the Caenorhabditis and other Nematode Taxa Providing Novel Means for Genetic and Biochemical Studies
Cited by: 2
Author(s): Bijendra Khadka, Tonuka Chatterjee, Bhagwati P. Gupta, Radhey S. Gupta
Software Mentions: 1
Published: almost 7 years ago

10.3390/genes11080866

Displacement of Slow-Turnover DNA Glycosylases by Molecular Traffic on DNA
Cited by: 5
Author(s): Anna V. Yudkina, Anton V. Endutkin, Evgeniia A. Diatlova, Nina Moor, Ivan P. Vokhtantsev, Inga R. Grin, Dmitry O. Zharkov
Software Mentions: 1
Published: almost 6 years ago

10.3390/genes11091021

Two Cases of Recessive Intellectual Disability Caused by NDST1 and METTL23 Variants
Cited by: 5
Author(s): Amjad Khan, Zhichao Miao, Muhammad Umair, Amir Ullah, Mohammad A. Alshabeeb, Muhammad Bilal, Farooq Ahmad, Gudrun Rappold, Muhammad Ansar, Raphaël Carapito
Software Mentions: 1
Published: almost 6 years ago

10.3390/genes11101222

Fine-Tuning of Alanyl-tRNA Synthetase Quality Control Alleviates Global Dysregulation of the Proteome
Cited by: 1
Author(s): Paul Kelly, Arundhati Kavoor, Michael Ibba
Software Mentions: 1
Published: over 5 years ago

10.3390/genes11111258

Characterization, Knockdown and Parental Effect of Hexokinase Gene of Cnaphalocrocis medinalis (Lepidoptera: Pyralidae) Revealed by RNA Interference
Cited by: 14
Author(s): Muhammad Shakeel, Juan Du, Shangwei Li, Yuan-Jin Zhou, Naeem Sarwar, Syed Bukhari
Software Mentions: 1
Published: over 5 years ago

10.3390/genes11121434

TYK2 Variants in B-Acute Lymphoblastic Leukaemia
Cited by: 4
Author(s): Edgar Turrubiartes-Martínez, Irene Bodega-Mayor, Pablo Delgado‐Wicke, Francisca Molina‐Jiménez, Diana Casique‐Aguirre, Martín González-Andrade, Inmaculada Rapado, Mireia Camós, Cristina Díaz‐de‐Heredia, Eva Barragán, Manuel Ramírez-Orellana, Beatriz Aguado, Á Figuera, Joaquín Martínez‐López, Elena Fernández‐Ruiz
Software Mentions: 1
Published: over 5 years ago

10.3390/genes11121464

The AP2/ERF Gene Family in Triticum durum: Genome-Wide Identification and Expression Analysis under Drought and Salinity Stresses
Cited by: 70
Author(s): Sahar Faraji, Ertuğrul Filiz, Seyed Kamal Kazemitabar, Alessandro Vannozzi, Fabio Palumbo, Gianni Barcaccia, Parviz Heidari
Software Mentions: 1
Published: over 5 years ago

10.3390/genes11121474

Identification of Novel CDH23 Variants Causing Moderate to Profound Progressive Nonsyndromic Hearing Loss
Cited by: 8
Author(s): Khushnooda Ramzan, Nouf S. Al‐Numair, Sarah Al‐Ageel, Lina El-Baik, Nadia Sakati, Selwa A.F. Al-Hazzaa, Mohammed Al–Owain, Faiqa Imtiaz
Software Mentions: 1
Published: over 5 years ago

10.3390/genes12020127

Msh Pilus Mutations Increase the Ability of a Free-Living Bacterium to Colonize a Piscine Host
Cited by: 3
Author(s): Jarrett F. Lebov, Brendan J. M. Bohannan
Software Mentions: 1
Published: over 5 years ago

10.3390/genes12020294

Pancytopenia, Recurrent Infection, Poor Wound Healing, Heterotopia of the Brain Probably Associated with A Candidate Novel de Novo CDC42 Gene Defect: Expanding the Molecular and Phenotypic Spectrum
Cited by: 8
Author(s): Abdulaziz Asiri, Deemah Alwadaani, Muhammad Umair, Kheloud M. Alhamoudi, Mohammed H AlMuhanna, Abdul Nasır, Bahauddeen M. Alrfaei, Abeer Al Tuwaijri, Tlili Barhoumi, Yusra Alyafee, Bader Almuzzaini, Mohammed Aldrees, Mariam Ballow, Latifah Alayyar, Abdulkareem AlAbdulrahman, Yazeid Alhaidan, Nahlah Al Ghasham, Sulaiman Al-Ajaji, Mohammad Alsalamah, Wafa Al Suwairi, Majid Alfadhel
Software Mentions: 1
Published: over 5 years ago

10.3390/genes12040464

Cloning, Characterization, and RNA Interference Effect of the UDP-N-Acetylglucosamine Pyrophosphorylase Gene in Cnaphalocrocis medinalis
Cited by: 6
Author(s): Yuan-Jin Zhou, Juan Du, Shangwei Li, Muhammad Shakeel, Jiajing Li, Xiao-Gui Meng
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA118.007171

A surface-exposed GH26 β-mannanase from Bacteroides ovatus: Structure, role, and phylogenetic analysis of BoMan26B
Cited by: 18
Author(s): Viktoria Bågenholm, Mathias Wiemann, Sumitha K. Reddy, Abhishek Bhattacharya, Anna Rosengren, D.T. Logan, Henrik Stålbrand
Software Mentions: 1
Published: about 7 years ago

10.1074/jbc.AC119.009977

Human ATG4 autophagy proteases counteract attachment of ubiquitin-like LC3/GABARAP proteins to other cellular proteins
Cited by: 37
Author(s): Alexander Agrotis, Lucas von Chamier, Harriet Oliver, Koshiro Kiso, Tanya Singh, Robin Ketteler
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA119.009367

Hereditary tyrosinemia type I–associated mutations in fumarylacetoacetate hydrolase reduce the enzyme stability and increase its aggregation rate
Cited by: 12
Author(s): Iratxe Macías, Ana Laín, Ganeko Bernardo‐Seisdedos, David Gil, Esperanza Gónzalez, Juan Manuel Falcón‐Pérez, Óscar Millet
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA119.007654

A novel epitope-presenting thermostable scaffold for the development of highly specific insulin-like growth factor-1/2 antibodies
Cited by: 3
Author(s): Carmen Peeß, Christian Schölz, David Casagolda, Hartmut Düfel, Michael Gerg, Frank Kowalewsky, Marco Bocola, Leopold von Proff, Sabine Goller, Heidi Klöppel-Swarlik, Alessandra Hoppe, Michael Schräml
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA119.009213

A strategy for the selection of monovalent antibodies that span protein dimer interfaces
Cited by: 14
Author(s): Jamie B. Spangler, Ignacio Moraga, Kevin Jude, Christina S Savvides, K. Christopher García
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA119.009306

Crystal structure of the first eukaryotic bilin reductase GtPEBB reveals a flipped binding mode of dihydrobiliverdin
Cited by: 8
Author(s): Johannes A. Sommerkamp, Nicole Frankenberg‐Dinkel, Eckhard Hofmann
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA119.009894

Group A, B, C, and G Streptococcus Lancefield antigen biosynthesis is initiated by a conserved α-d-GlcNAc-β-1,4-l-rhamnosyltransferase
Cited by: 21
Author(s): Azul Zorzoli, Benjamin Meyer, Elaine Adair, В. И. Торгов, V. V. Veselovsky, Л. Л. Данилов, Dušan Uhrı́n, Helge C. Dorfmueller
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA119.010160

The finger loop of the SRA domain in the E3 ligase UHRF1 is a regulator of ubiquitin targeting and is required for the maintenance of DNA methylation
Cited by: 10
Author(s): Robert M. Vaughan, Scott B. Rothbart, Bradley M. Dickson
Software Mentions: 1
Published: almost 7 years ago

10.1074/jbc.RA119.010099

Molecular basis for the function of the αβ heterodimer of human NAD-dependent isocitrate dehydrogenase
Cited by: 14
Author(s): Pengkai Sun, Tengfei Ma, Tianlong Zhang, Huarui Zhu, Jianyang Zhang, Yabing Liu, Jianping Ding
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.010619

A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16)
Cited by: 93
Author(s): Alexander Holm Viborg, Nicolas Terrapon, Vincent Lombard, Gurvan Michel, Mirjam Czjzek, Bernard Henrissat, Harry Brumer
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.010196

An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera
Cited by: 11
Author(s): Yuping Jia, Crista A. Burbidge, Crystal Sweetman, Emi Kaye Schutz, Kathleen L. Soole, Colin L. D. Jenkins, Robert D. Hancock, John B. Bruning, Christopher M. Ford
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.010072

Mutations at hypothetical binding site 2 in insulin and insulin-like growth factors 1 and 2 result in receptor- and hormone-specific responses
Cited by: 18
Author(s): Kateřina Macháčková, Květoslava Mlčochová, Pavlo Potalitsyn, Kateřina Hanková, Ondřej Socha, Miloš Budĕšı́nský, Anja Muždalo, Martin Lepšı́k, Michaela Černeková, Jelena Radosavljević, Milan Fábry, Katarína Mitrová, Martina Chrudinová, Jingjing Lin, Yevgen P. Yurenko, Pavel Hobza, Irena Selicharová, Lenka Žáková, Jiřı́ Jiráček
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.010206

Structural and functional aspects of mannuronic acid–specific PL6 alginate lyase from the human gut microbe Bacteroides cellulosilyticus
Cited by: 39
Author(s): Emil G. P. Stender, Christian Andersen, Folmer Fredslund, Jesper Holck, Amalie Solberg, David Tézé, Günther H.J. Peters, Bjørn E. Christensen, Finn Lillelund Aachmann, Ditte Hededam Welner, Birte Svensson
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.010251

An engineered antibody fragment targeting mutant β-catenin via major histocompatibility complex I neoantigen presentation
Cited by: 14
Author(s): Michelle S. Miller, Jacqueline Douglass, Michael S. Hwang, Andrew D. Skora, Michael Murphy, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Shibin Zhou, Sandra B. Gabelli
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.011018

The structure of the bacterial iron–catecholate transporter Fiu suggests that it imports substrates via a two-step mechanism
Cited by: 19
Author(s): Rhys Grinter, Trevor Lithgow
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.011435

Structural and biochemical studies of the glucuronoyl esterase OtCE15A illuminate its interaction with lignocellulosic components
Cited by: 16
Author(s): Scott Mazurkewich, Jens-Christian N. Poulsen, Leila Lo Leggio, Johan Larsbrink
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.011098

Neutrophil myeloperoxidase harbors distinct site-specific peculiarities in its glycosylation
Cited by: 34
Author(s): Karli R. Reiding, Vojtěch Franc, Minke G. Huitema, Elisabeth Brouwer, Peter Heeringa, Albert J. R. Heck
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.012078

Single-molecule imaging analysis reveals the mechanism of a high-catalytic-activity mutant of chitinase A from Serratia marcescens
Cited by: 10
Author(s): Akasit Visootsat, Akihiko Nakamura, Paul Vignon, Hiroki Watanabe, Takayuki Uchihashi, Ryota Iino
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.010221

A transient amphipathic helix in the prodomain of PCSK9 facilitates binding to low-density lipoprotein particles
Cited by: 14
Author(s): Samantha K. Sarkar, Alexander C. Y. Foo, Angela Matyas, Ikhuosho Asikhia, Tanja Kosenko, Natalie K. Goto, Ariela Vergara-Jaque, Thomas A. Lagace
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA119.010645

HLA-DM catalytically enhances peptide dissociation by sensing peptide–MHC class II interactions throughout the peptide-binding cleft
Cited by: 9
Author(s): Eduardo Reyes-Vargas, Adam P. Barker, Zemin Zhou, He Xiao, Peter E. Jensen
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA120.012783

Mammalian lectin arrays for screening host–microbe interactions
Cited by: 12
Author(s): Sabine A. F. Jégouzo, Conor Nelson, Thomas Hardwick, Suet‐Ping Wong, Noel Kuan Kiat Lau, Gaik Kin Emily Neoh, Rocío Castellanos-Rueda, Zhiyao Huang, Benjamin Mignot, Aanya Hirdaramani, Annie Howitt, Kathryn Frewin, Zheng Ming Shen, Rhys Fox, Rachel Wong, Momoko Ando, Lauren Emony, Henderson Zhu, Angela Holder, Dirk Werling, Nitya Krishnan, Abigail Clements, Maureen E. Taylor, Kurt Drickamer
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA120.012695

Effects of deficiency in the RLBP1-encoded visual cycle protein CRALBP on visual dysfunction in humans and mice
Cited by: 23
Author(s): José Ronaldo Lima de Carvalho, Hye Jin Kim, Keiko Ueda, Jin Zhao, Aaron P. Owji, Tingting Yang, Stephen H. Tsang, Janet R. Sparrow
Software Mentions: 1
Published: about 6 years ago

10.1074/jbc.RA120.012892

eGFP-tagged Wnt-3a enables functional analysis of Wnt trafficking and signaling and kinetic assessment of Wnt binding to full-length Frizzled
Cited by: 21
Author(s): Janine Wesslowski, Paweł Kozielewicz, Xianxian Wang, Haijun Cui, Hannes Schihada, D Kranz, Pradhipa Karuna M, Pavel A. Levkin, Julia Christina Gross, Michael Boutros, Gunnar Schulte, Gary Davidson
Software Mentions: 1
Published: about 6 years ago

10.1074/jbc.RA120.013136

The structure and reactivity of the HoxEFU complex from the cyanobacterium Synechocystis sp. PCC 6803
Cited by: 14
Author(s): Jacob H. Artz, Monika Tokmina‐Lukaszewska, David W. Mulder, Carolyn E. Lubner, Kirstin Gutekunst, Jens Appel, Brian Bothner, Marko Boehm, Paul W. King
Software Mentions: 1
Published: about 6 years ago

10.1074/jbc.REV120.011473

Role of the lipid bilayer in outer membrane protein folding in Gram-negative bacteria
Cited by: 73
Author(s): Jim E. Horne, David J. Brockwell, Sheena E. Radford
Software Mentions: 1
Published: about 6 years ago

10.1074/jbc.RA120.014016

T cell receptor interactions with human leukocyte antigen govern indirect peptide selectivity for the cancer testis antigen MAGE-A4
Cited by: 18
Author(s): C.H. Coles, Catriona McMurran, Alun G. Lloyd, M. Benjamin Hock, Linda Hibbert, M.C.C. Raman, Conor Hayes, P.J. Lupardus, D.K. Cole, Stephen Harper
Software Mentions: 1
Published: almost 6 years ago

10.1074/jbc.RA119.009811

Intracerebroventricular enzyme replacement therapy with β-galactosidase reverses brain pathologies due to GM1 gangliosidosis in mice
Cited by: 27
Author(s): Joseph C. Chen, Amanda Luu, Nathan Wise, Rolando De Angelis, Vishal Agrawal, Linley Mangini, Jon Vincelette, Britta Handyside, Harry J. Sterling, Melanie J. Lo, Hio Wong, Nicole Galicia, Glenn Pacheco, Jeremy Van Vleet, Alexander Giaramita, Sylvia Fong, Sushmita Roy, Chuck Hague, Roger Lawrence, Sherry Bullens, Terri Christianson, Alessandra d’Azzo, Brett E. Crawford, Stuart Bunting, Jonathan H. LeBowitz, Gouri Yogalingam
Software Mentions: 1
Published: almost 6 years ago

10.1074/jbc.RA120.014135

Characterizing the binding and function of TARP γ8-selective AMPA receptor modulators
Cited by: 17
Author(s): Jan-Niklas Dohrke, Jake F. Watson, Kristian Birchall, Ingo H. Greger
Software Mentions: 1
Published: almost 6 years ago

10.1074/jbc.RA120.014177

Tandem sialoglycan-binding modules in a Streptococcus sanguinis serine-rich repeat adhesin create target dependent avidity effects
Cited by: 2
Author(s): Haley Stubbs, Barbara A. Bensing, Izumi Yamakawa, Pankaj Sharma, Hai Yu, Xi Chen, Paul M. Sullam, T.M. Iverson
Software Mentions: 1
Published: almost 6 years ago

10.1074/jbc.RA120.014792

Domain architecture divergence leads to functional divergence in binding and catalytic domains of bacterial and fungal cellobiohydrolases
Cited by: 11
Author(s): Akihiko Nakamura, Daiki Ishiwata, Akasit Visootsat, Taku Uchiyama, Kimihiko Mizutani, Satoshi Kaneko, Takeshi Murata, Kiyohiko Igarashi, Ryota Iino
Software Mentions: 1
Published: almost 6 years ago

10.1074/jbc.RA120.014366

Evolutionary selection of a 19-stranded mitochondrial β-barrel scaffold bears structural and functional significance
Cited by: 12
Author(s): Shashank Srivastava, Radhakrishnan Mahalakshmi
Software Mentions: 1
Published: almost 6 years ago

10.1074/jbc.RA120.014705

The C-terminal region of the plasmid partitioning protein TubY is a tetramer that can bind membranes and DNA
Cited by: 1
Author(s): Ikuko Hayashi
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.015645

Mapping the transition state for a binding reaction between ancient intrinsically disordered proteins
Cited by: 10
Author(s): Elin Karlsson, Cristina Paissoni, Amanda M. Erkelens, Zeinab Amiri-Tehranizadeh, Frieda A. Sorgenfrei, Eva Andersson, Weihua Ye, Carlo Camilloni, Per Jemth
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.014695

Mouse Ifit1b is a cap1-RNA–binding protein that inhibits mouse coronavirus translation and is regulated by complexing with Ifit1c
Cited by: 4
Author(s): Harriet V Mears, Trevor R. Sweeney
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.014145

The cation diffusion facilitator protein MamM's cytoplasmic domain exhibits metal-type dependent binding modes and discriminates against Mn2+
Cited by: 3
Author(s): S. Barber-Zucker, Jenny Hall, Afonso Froes, Sofiya Kolusheva, Fraser MacMillan, Raz Zarivach
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.014780

Identification of compounds that bind the centriolar protein SAS-6 and inhibit its oligomerization
Cited by: 2
Author(s): J. Busch, Minos‐Timotheos Matsoukas, Maria Musgaard, Georgios A. Spyroulias, Philip C. Biggin, Ioannis Vakonakis
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.014883

Nitro-fatty acids as activators of hSIRT6 deacetylase activity
Cited by: 13
Author(s): Mara Carreño, Mariana Bresque, Matías Machado, Leonardo Santos, Rosario Durán, Darío A. Vitturi, Carlos Escande, Ana Denicola
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016105

Molecular characterization of the RNA-protein complex directing −2/−1 programmed ribosomal frameshifting during arterivirus replicase expression
Cited by: 9
Author(s): Ankoor Patel, Emmely E. Treffers, Markus Meier, Trushar R. Patel, Jörg Stetefeld, Eric J. Snijder, Brian L. Mark
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA119.012056

Exploitation of dihydroorotate dehydrogenase (DHODH) and p53 activation as therapeutic targets: A case study in polypharmacology
Cited by: 9
Author(s): Marcus J.G.W. Ladds, Gergana Popova, Andrés Pastor Fernández, Srinivasaraghavan Kannan, Ingeborg M.M. van Leeuwen, Maria Håkansson, Björn Walse, Fredrik Tholander, Ravi Bhatia, Chandra Verma, David P. Lane, Sonia Laı́n
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.015553

GUCY2D mutations in retinal guanylyl cyclase 1 provide biochemical reasons for dominant cone–rod dystrophy but not for stationary night blindness
Cited by: 9
Author(s): Igor V. Peshenko, Elena V. Olshevskaya, Alexander M. Dizhoor
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016457

Determinants of replication protein A subunit interactions revealed using a phosphomimetic peptide
Cited by: 3
Author(s): Sung‐Jin Lee, Jeongbeen Heo, Chin‐Ju Park
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016149

Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-β-1,3-galactanase from Phanerochaete chrysosporium
Cited by: 3
Author(s): Kiminori Matsuyama, N. Kishine, Zui Fujimoto, Naoki Sunagawa, Toshihisa Kotake, Yoichi Tsumuraya, Masahiro Samejima, Kiyohiko Igarashi, Satoshi Kaneko
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016352

The evolution and mechanism of GPCR proton sensing
Cited by: 24
Author(s): Jacob B. Rowe, Nicholas J. Kapolka, Geoffrey J. Taghon, William M. Morgan, Daniel G. Isom
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.015952

Crystal structures of γ-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine
Cited by: 2
Author(s): Ning Wang, Xiu-Lan Chen, Chao Gao, Ming Peng, Peng Wang, Na Zhang, Fuchuan Li, Gui‐Peng Yang, Qing-Tao Shen, Shengying Li, Yin Chen, Yuzhong Zhang, Chunyang Li
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016297

Ancestral reconstruction of mammalian FMO1 enables structural determination, revealing unique features that explain its catalytic properties
Cited by: 9
Author(s): Gautier Bailleul, Callum R. Nicoll, María Laura Mascotti, Andrea Mattevi, Marco W. Fraaije
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.015996

Structural basis for antigen recognition by methylated lysine–specific antibodies
Cited by: 6
Author(s): M. Ishii, Makoto Nakakido, José M. M. Caaveiro, Daisuke Kuroda, C.J. Okumura, Toshiaki Maruyama, Kevin C. Entzminger, Kouhei Tsumoto
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016542

Structure of transmembrane prolyl 4-hydroxylase reveals unique organization of EF and dioxygenase domains
Cited by: 4
Author(s): Matti Myllykoski, Aleksi Sutinen, M.K. Koski, J.P. Kallio, Arne Raasakka, Johanna Myllyharju, Rik K. Wierenga, Peppi Koivunen
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.014956

Mutational analysis of the alpha subunit of eIF2B provides insights into the role of eIF2B bodies in translational control and VWM disease
Cited by: 6
Author(s): Karl Norris, Rachel E Hodgson, Tawni Dornelles, Kyle Allen, Benjamin Abell, Mark P. Ashe, Susan G. Campbell
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016271

Crystal structure of higher plant heme oxygenase-1 and its mechanism of interaction with ferredoxin
Cited by: 7
Author(s): Rei Tohda, Hideaki Tanaka, Risa Mutoh, Xuhong Zhang, Young-Ho Lee, Tsuyoshi Konuma, Takahisa Ikegami, Catharina T. Migita, Genji Kurisu
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100255

A general chemical crosslinking strategy for structural analyses of weakly interacting proteins applied to preTCR–pMHC complexes
Cited by: 3
Author(s): Réka Mizsei, Xiaolong Li, Wan-Na Chen, Mónika Szabó, Jia-Huai Wang, Gerhard Wagner, Ellis L. Reinherz, Robert J. Mallis
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016393

Structural basis for multifunctional roles of human Ints3 C-terminal domain
Cited by: 10
Author(s): Jian Li, Xiaofeng Ma, Surajit Banerjee, Sankar Baruah, Nicholas Schnicker, Eunmiri Roh, Weiya Ma, Kangdong Liu, Ann M. Bode, Zigang Dong
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.016818

Structure and mechanism of Staphylococcus aureus oleate hydratase (OhyA)
Cited by: 12
Author(s): C.D. Radka, Justin L. Batte, Matthew W. Frank, Brandon Young, Charles O. Rock
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.RA120.015932

Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase
Cited by: 14
Author(s): R. Jonnalagadda, Antonio Del Rio Flores, Wenlong Cai, Rimsha Mehmood, Maanasa Narayanamoorthy, Chaoxiang Ren, Jan Paulo T. Zaragoza, Heather J. Kulik, Wenjun Zhang, Catherine L. Drennan
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100343

Defective binding of SPINK1 variants is an uncommon mechanism for impaired trypsin inhibition in chronic pancreatitis
Cited by: 15
Author(s): András Szabó, Vanda Toldi, Lívia Diána Gazda, Alexandra Demcsák, József Tőzsér, Miklós Sahin‐Tóth
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100361

Disruption of the integrin-linked kinase (ILK) pseudokinase domain affects kidney development in mice
Cited by: 5
Author(s): Nada Bulus, Kyle L. Brown, Glenda Mernaugh, Anika Böttcher, Xinyu Dong, Charles R. Sanders, Ambra Pozzi, Reinhard Fässler, Roy Zent
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100308

Structural characterization of Myxococcus xanthus MglC, a component of the polarity control system, and its interactions with its paralog MglB
Cited by: 5
Author(s): Srajan Kapoor, Akriti Kodesia, Nidhi Kalidas, . Ashish, Krishan Gopal Thakur
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100360

Cross-linking and modification of fibronectin by peroxynitrous acid: Mapping and quantification of damage provides a new model for domain interactions
Cited by: 11
Author(s): Michele Mariotti, Adelina Rogowska-Wrzesińska, Per Hägglund, Michael J. Davies
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100350

Binding of calcium and magnesium to human cardiac troponin C
Cited by: 12
Author(s): Kaveh Rayani, Justin T Seffernick, Alison Yueh Li, Jonathan P. Davis, Anne M. Spuches, Filip Van Petegem, R. John Solaro, Steffen Lindert, Glen F. Tibbits
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100427

DNA ligase I fidelity mediates the mutagenic ligation of pol β oxidized and mismatch nucleotide insertion products in base excision repair
Cited by: 10
Author(s): Pradnya Kamble, Kalen Hall, Mahesh Chandak, Qun Tang, Melike Çağlayan
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100472

An experimental strategy to probe Gq contribution to signal transduction in living cells
Cited by: 16
Author(s): Julian Patt, Judith Alenfelder, Eva Marie Pfeil, Jan H. Voß, Nicole Merten, Funda Eryilmaz, Nina Heycke, Uli Rick, Asuka Inoue, Stefan Kehraus, Xavier Deupí, Christa E. Müller, Gabriele M. König, Max Crüsemann, Evi Kostenis
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100463

Characterization of two enzymes from Psychrobacter cryohalolentis that are required for the biosynthesis of an unusual diacetamido-d-sugar
Cited by: 6
Author(s): M.P. Linehan, James B. Thoden, Hazel M. Holden
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100492

Structure of 3-mercaptopropionic acid dioxygenase with a substrate analog reveals bidentate substrate binding at the iron center
Cited by: 10
Author(s): Nicholas J York, Molly M. Lockart, Sinjinee Sardar, Nimesh Khadka, Wuxian Shi, Ronald E. Stenkamp, Jianye Zhang, Philip D. Kiser, Brad S. Pierce
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100458

Ca2+-saturated calmodulin binds tightly to the N-terminal domain of A-type fibroblast growth factor homologous factors
Cited by: 9
Author(s): Ryan Mahling, Cade R. Rahlf, Samuel C. Hansen, Matthew R. Hayden, Madeline A. Shea
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100545

TGF-β-induced cell motility requires downregulation of ARHGAPs to sustain Rac1 activity
Cited by: 3
Author(s): Mitsuyoshi Motizuki, Daizo Koinuma, Takashi Yokoyama, Yoshio Itoh, Chiho Omata, Kohei Miyazono, Masao Saitoh, Keiji Miyazawa
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100612

Functional mechanisms of MYRF DNA-binding domain mutations implicated in birth defects
Cited by: 7
Author(s): Chuandong Fan, Hongjoo An, Mohamed Sharif, Dongkyeong Kim, Yungki Park
Software Mentions: 1
Published: over 5 years ago