Projects: pypi: PyMOL

https://packages.ecosyste.ms/registries/pypi.org/packages/PyMOL


1 version
Latest release: almost 3 years ago
5 dependent packages

Science Score: 90/100
Starting Score: 100 points
Bonuses:
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem

Very Likely Science (90)

Papers Mentioning PyMOL 8,266

10.7554/eLife.64056
Molecular insights into substrate recognition and discrimination by the N-terminal domain of Lon AAA+ protease
Cited by: 13
Author(s): Shiou‐Ru Tzeng, Yin-Chu Tseng, Chien‐Chu Lin, Chia-Ying Hsu, Shing‐Jong Huang, Yi-Ting Kuo, Chin-Fu Chang
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.60030
Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation
Cited by: 31
Author(s): Ljuvica Kolich, Ya-Ting Chang, Nicolas Coudray, Sabrina I. Giacometti, M.R. MacRae, Georgia L. Isom, Evelyn M Teran, Gira Bhabha, D.C. Ekiert
Software Mentions: 1
Published: about 6 years ago
10.7554/eLife.64411
Characterization and functional analysis of cathelicidin-MH, a novel frog-derived peptide with anti-septicemic properties
Cited by: 22
Author(s): Jinwei Chai, Xin Chen, Tiaofei Ye, Baishuang Zeng, Qingye Zeng, Jiena Wu, Barbora Kaščáková, Larissa Almeida Martins, Tatyana Prudniková, Ivana Kutá Smatanová, Michail Kotsyfakis, Xueqing Xu
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.12095
The acidic domain of the endothelial membrane protein GPIHBP1 stabilizes lipoprotein lipase activity by preventing unfolding of its catalytic domain
Cited by: 67
Author(s): Simon Mysling, Kristian Kølby Kristensen, Mikael Larsson, Anne P. Beigneux, Henrik Gårdsvoll, Loren G. Fong, André Bensadouen, Thomas J. D. Jørgensen, Stephen G. Young, Michael Ploug
Software Mentions: 1
Published: over 10 years ago
10.7554/eLife.27389
Asymmetric recognition of HIV-1 Envelope trimer by V1V2 loop-targeting antibodies
Cited by: 47
Author(s): Haoqing Wang, Harry B. Gristick, Louise Scharf, Anthony P. West, Rachel P. Galimidi, Michael S. Seaman, Natalia T. Freund, Michel C. Nussenzweig, Pamela J. Björkman
Software Mentions: 1
Published: about 9 years ago
10.7554/eLife.69444
Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
Cited by: 15
Author(s): Tatiana P. Soares da Costa, Cody J Hall, Santosh Panjikar, Jessica A Wyllie, Rebecca M. Christoff, Saadi Bayat, Mark D. Hulett, Belinda M. Abbott, Anthony R. Gendall, Matthew A. Perugini
Software Mentions: 1
Published: almost 5 years ago
10.7554/eLife.12613
Evolutionary genomics of epidemic visceral leishmaniasis in the Indian subcontinent
Cited by: 131
Author(s): Hideo Imamura, Tim Downing, Frederik Van den Broeck, Mandy Sanders, Suman Rijal, Shyam Sundar, An Mannaert, Manu Vanaerschot, Maya Berg, Géraldine De Muylder, Franck Dumetz, Bart Cuypers, Ilse Maes, Malgorzata A. Domagalska, Saskia Decuypere, Keshav Rai, Surendra Uranw, Narayan Bhattarai, Basudha Khanal, Vijay Kumar Prajapati, Smriti Sharma, Olivia Stark, Gabriele Schönian, Harry P. de Koning, Luca Settimo, Benoît Vanhollebeke, Syamal Roy, Bart Ostyn, Marleen Boelaert, Louis Maes, Matthew Berriman, Jean‐Claude Dujardin, James A. Cotton
Software Mentions: 1
Published: over 10 years ago
10.7554/eLife.30395
Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID
Cited by: 27
Author(s): Kapil Gupta, Aleksandra A. Watson, Tiago Baptista, Elisabeth Scheer, A. Chambers, Christine Koehler, Juan Zou, Ima Obong-Ebong, Eaazhisai Kandiah, Arturo Temblador, Adam Round, Éric Forest, Petr Man, Christoph Bieniossek, Ernest D. Laue, Edward A. Lemke, Juri Rappsilber, Carol V. Robinson, Didier Devys, Làszlò Tora, Imre Berger
Software Mentions: 1
Published: over 8 years ago
10.7554/eLife.45343
Enterococcus faecium secreted antigen A generates muropeptides to enhance host immunity and limit bacterial pathogenesis
Cited by: 54
Author(s): byungchul Kim, Yen‐Chih Wang, Charles W Hespen, Juliel Espinosa, Jeanne Salje, Kavita J. Rangan, Deena A. Oren, Jin Young Kang, Virginia A. Pedicord, Howard C. Hang
Software Mentions: 1
Published: about 7 years ago
10.7554/eLife.02687
Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Cited by: 44
Author(s): Zhe Zhang, Tianlong Zhang, Shanshan Wang, Zhou Gong, Chun Tang, Jiangye Chen, Jianping Ding
Software Mentions: 1
Published: about 12 years ago
10.7554/eLife.51420
Molecular basis for catabolism of the abundant metabolite trans-4-hydroxy-L-proline by a microbial glycyl radical enzyme
Cited by: 12
Author(s): Lindsey R. F. Backman, Yung T. Huang, Mary C. Andorfer, Brian Gold, Ronald T. Raines, Emily P. Balskus, Catherine L. Drennan
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.65005
Structure of HIV-1 gp41 with its membrane anchors targeted by neutralizing antibodies
Cited by: 12
Author(s): Christophe Caillat, Delphine Guilligay, Johana Torralba, Nikolas Friedrich, José L. Nieva, Alexandra Trkola, Christophe Chipot, François Dagognet, Winfríed Weissenhorn
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.45221
Structural basis for mammalian nucleotide sugar transport
Cited by: 24
Author(s): Shivani Ahuja, Matthew R. Whorton
Software Mentions: 1
Published: about 7 years ago
10.7554/eLife.66165
Autism-associated SHANK3 missense point mutations impact conformational fluctuations and protein turnover at synapses
Cited by: 11
Author(s): Michael Bucher, Stephan Niebling, Yang Han, Dmitry Molodenskiy, Fatemeh Hassani Nia, Hans‐Jürgen Kreienkamp, Dmitri I. Svergun, Eunjoon Kim, Alla S. Kostyukova, Michael R. Kreutz, Marina Mikhaylova
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.39273
Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition
Cited by: 69
Author(s): J.L. Llácer, Tanweer Hussain, Adesh K. Saini, Jagpreet S. Nanda, Sukhvir Kaur, Yuliya Gordiyenko, Rajeev Kumar, Alan G. Hinnebusch, Jon R. Lorsch, V. Ramakrishnan
Software Mentions: 1
Published: over 7 years ago
10.7554/eLife.06421
The C-terminal region of the motor protein MCAK controls its structure and activity through a conformational switch
Cited by: 28
Author(s): Sandeep K. Talapatra, Bethany Harker, Julie Welburn
Software Mentions: 1
Published: about 11 years ago
10.7554/eLife.56059
A conserved LDL-receptor motif regulates corin and CD320 membrane targeting in polarized renal epithelial cells
Cited by: 6
Author(s): Ce Zhang, Yue Chen, Shujun Sun, Yikai Zhang, Lina Wang, Zhipu Luo, Meng Li, Liang Dong, Ningzheng Dong, Qingyu Wu
Software Mentions: 1
Published: over 5 years ago
10.7554/eLife.60048
Elongation inhibitors do not prevent the release of puromycylated nascent polypeptide chains from ribosomes
Cited by: 20
Author(s): Benjamin D. Hobson, Linghao Kong, Erik W. Hartwick, Ruben L Gonzalez, Peter A. Sims
Software Mentions: 1
Published: almost 6 years ago
10.7554/eLife.52541
Targeted induction of a silent fungal gene cluster encoding the bacteria-specific germination inhibitor fumigermin
Cited by: 48
Author(s): Maria C. Stroe, Tina Netzker, Kirstin Scherlach, Thomas Krüger, Christian Hertweck, Vito Valiante, Axel A. Brakhage
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.53479
A CLC-ec1 mutant reveals global conformational change and suggests a unifying mechanism for the CLC Cl–/H+ transport cycle
Cited by: 28
Author(s): Tanmay Chavan, Ricky C. Cheng, Tao Jiang, I.I. Mathews, Richard A. Stein, Antoine Koehl, Hassane S. Mchaourab, Emad Tajkhorshid, Merritt Maduke
Software Mentions: 1
Published: about 6 years ago
10.7554/eLife.53169
An ultralong CDRH2 in HCV neutralizing antibody demonstrates structural plasticity of antibodies against E2 glycoprotein
Cited by: 19
Author(s): Andrew I. Flyak, Stormy Ruiz, Jordan Salas, Semi Rho, Justin R. Bailey, Pamela J. Björkman
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.35407
Multisite dependency of an E3 ligase controls monoubiquitylation-dependent cell fate decisions
Cited by: 25
Author(s): Achim Werner, Regina Baur, Nia Teerikorpi, Deniz U Kaya, Michael Rapé
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19041239
Telomerase Inhibition by a New Synthetic Derivative of the Aporphine Alkaloid Boldine
Cited by: 11
Author(s): Sakineh Kazemi Noureini, Mitra Kheirabadi, Fatima Masoumi, Farve Khosrogerdi, Younes Zarei, Cristian Suárez-Rozas, Julio Salas-Norambuena, Bruce K. Cassels
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms19041248
Molecular Evolution and Expression Divergence of HMT Gene Family in Plants
Cited by: 8
Author(s): Man Zhao, Peng Chen, Wenyi Wang, Fengjie Yuan, Derui Zhu, Zhao Wang, Xiangxian Ying
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms19041184
The Crystal Structure of the R280K Mutant of Human p53 Explains the Loss of DNA Binding
Cited by: 15
Author(s): Ana Gomes, Filipa Trovão, Benedita A. Pinheiro, Filipe Freire, Sara Gomes, Carla Cristina Marques de Oliveira, Lucı́lia Domingues, Maria João Romão, Lucı́lia Saraiva, Ana Luı́sa Carvalho
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms19051409
Expression and Interaction Analysis among Saffron ALDHs and Crocetin Dialdehyde
Cited by: 11
Author(s): Lourdes Gómez-Gómez, Luis F. Pacios, Araceli Díaz‐Perales, María Garrido‐Arandia, Javier Argandoña, Ángela Rubio-Moraga, Oussama Ahrazem
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms19051430
A Functional Study Identifying Critical Residues Involving Metal Transport Activity and Selectivity in Natural Resistance-Associated Macrophage Protein 3 in Arabidopsis thaliana
Cited by: 17
Author(s): Jiyu Li, Lihua Wang, Lu Zheng, Yuerong Wang, Xi Chen, Wei Zhang
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms19061617
Ligand Access Channels in Cytochrome P450 Enzymes: A Review
Cited by: 53
Author(s): Philippe Urban, Thomas Lautier, Denis Pompon, Gilles Truan
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms19072135
In Planta Preliminary Screening of ER Glycoprotein Folding Quality Control (ERQC) Modulators
Cited by: 5
Author(s): Lucia Marti, Andrea Lia, Ida-Barbara Reca, Pietro Roversi, Angelo Santino, Nicole Zitzmann
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19082452
Expression, Functional Characterization, and Preliminary Crystallization of the Cochaperone Prefoldin from the Thermophilic Fungus Chaetomium thermophilum
Cited by: 4
Author(s): Kento Morita, Yohei Yamamoto, Akiko Hori, Tomohiro Obata, Yutaka Uno, Kyosuke Shinohara, Keiichi Noguchi, Kentaro Noi, Teru Ogura, Kentaro Ishii, Koichi Kato, Mahito Kikumoto, Rocío Arranz, José M. Valpuesta, Masafumi Yohda
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19082151
Protein Environment: A Crucial Triggering Factor in Josephin Domain Aggregation: The Role of 2,2,2-Trifluoroethanol
Cited by: 3
Author(s): Cristina Visentin, Susanna Navarro, Gianvito Grasso, Maria Elena Regonesi, Marco Agostino Deriu, Paolo Tortora, Salvador Ventura
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19082405
Edema Induced by a Crotalus durissus terrificus Venom Serine Protease (Cdtsp 2) Involves the PAR Pathway and PKC and PLC Activation
Cited by: 10
Author(s): Caroline Rabelo Costa, Mariana Novo Belchor, Caroline Fabri Bittencourt Rodrigues, Daniela de Oliveira Toyama, Marcos Antônio de Oliveira, Danielle P. Novaes, Marcos Hikari Toyama
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19092570
Ultrastructural Analysis of Prune Dwarf Virus Intercellular Transport and Pathogenesis
Cited by: 12
Author(s): Edmund Kozieł, Katarzyna Otulak, Józef J. Bujarski
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19092677
Targeting Amyloid Aggregation: An Overview of Strategies and Mechanisms
Cited by: 96
Author(s): Sofia Giorgetti, Claudio Greco, Paolo Tortora, Francesco A. Aprile
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19092496
Molecular Dynamics Exploration of Selectivity of Dual Inhibitors 5M7, 65X, and 65Z toward Fatty Acid Binding Proteins 4 and 5
Cited by: 40
Author(s): Fangfang Yan, Liu Xin-Guo, Shaolong Zhang, Jing Su, Qinggang Zhang, Jianzhong Chen
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19092692
Comparative In Vitro and In Silico Analysis of the Selectivity of Indirubin as a Human Ah Receptor Agonist
Cited by: 23
Author(s): Samantha C. Faber, Anatoly A. Soshilov, Sara Giani Tagliabue, Laura Bonati, Michael S. Denison
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19102876
Membrane-Bound Class III Peroxidases: Unexpected Enzymes with Exciting Functions
Cited by: 35
Author(s): Sabine Lüthje, Teresa Martínez-Cortés
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19103144
Effects of Panax Notoginseng Saponins on Esterases Responsible for Aspirin Hydrolysis In Vitro
Cited by: 10
Author(s): Zongxi Sun, Yang‐Chang Wu, Song Liu, Shaonan Hu, Bo Zhao, Pengyue Li, Shouying Du
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms19102928
Mapping the Contact Sites of the Escherichia coli Division-Initiating Proteins FtsZ and ZapA by BAMG Cross-Linking and Site-Directed Mutagenesis
Cited by: 11
Author(s): Winfried Roseboom, Madhvi G. Nazir, Nils Y. Meiresonne, Tamimount Mohammadi, Jolanda Verheul, Hansuk Buncherd, Alexandre M. J. J. Bonvin, Leo J. de Koning, Chris G. de Koster, Luitzen de Jong, Tanneke den Blaauwen
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19102953
Adaptive Evolution of the Eda Gene and Scales Loss in Schizothoracine Fishes in Response to Uplift of the Tibetan Plateau
Cited by: 10
Author(s): Cunfang Zhang, Chao Tong, Arne Ludwig, Yongtao Tang, Sijia Liu, Renyi Zhang, Chenguang Feng, Guogang Li, Zuogang Peng, Kai Zhao
Software Mentions: 1
Published: almost 8 years ago
10.3390/ijms19113664
Discovery of Novel Druggable Sites on Zika Virus NS3 Helicase Using X-ray Crystallography-Based Fragment Screening
Cited by: 3
Author(s): Ali H Munawar, Steven Beelen, Munawar Ahmad, Eveline Lescrinier, S.V. Strelkov
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms19113315
Co-Evolution of Intrinsically Disordered Proteins with Folded Partners Witnessed by Evolutionary Couplings
Cited by: 21
Author(s): Rita Pancsa, Fruzsina Zsolyomi, Péter Tompa
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms19113316
The 2β Splice Variation Alters the Structure and Function of the Stromal Interaction Molecule Coiled-Coil Domains
Cited by: 9
Author(s): Steve Chung, MengQi Zhang, Peter B. Stathopulos
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms19113409
In Silico Analysis of Missense Mutations as a First Step in Functional Studies: Examples from Two Sphingolipidoses
Cited by: 11
Author(s): Ana Patrícia Duarte, Diogo Ribeiro, Luciana Moreira, Olga Amaral
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms19123728
Studies on the Dual Activity of EGFR and HER-2 Inhibitors Using Structure-Based Drug Design Techniques
Cited by: 8
Author(s): Rafaela Molina de Angelo, Michell O. Almeida, Heberth de Paula, Káthia Maria Honório
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms19123915
The Nif3-Family Protein YqfO03 from Pseudomonas syringae MB03 Has Multiple Nematicidal Activities against Caenorhabditis elegans and Meloidogyne incognita
Cited by: 13
Author(s): Abdul Manan, Zahoor Ahmad Bazai, Fan Jin, Huiyang Yu, Lin Li
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20010050
Biosynthesis of Natural Rubber: Current State and Perspectives
Cited by: 72
Author(s): Xiao Men, Fan Wang, Guoqiang Chen, Haibo Zhang, Ming Xian
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20010015
Genome-Wide Analysis, Expression Profile, and Characterization of the Acid Invertase Gene Family in Pepper
Cited by: 24
Author(s): Long-Bin Shen, Yuling Qin, Zhiqiang Qi, Niu Yu, Ziji Liu, Weixia Liu, He Huang, Zhen-Mu Cao, Yan Yang
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20020286
Molecular Mechanisms of Leucine Zipper EF-Hand Containing Transmembrane Protein-1 Function in Health and Disease
Cited by: 18
Author(s): Qi‐Tong Lin, Peter B. Stathopulos
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20020383
Oxazole-Bridged Combretastatin A-4 Derivatives with Tethered Hydroxamic Acids: Structure–Activity Relations of New Inhibitors of HDAC and/or Tubulin Function
Cited by: 19
Author(s): Florian Schmitt, Lisa Chiara Gosch, Alexandra Dittmer, Matthias Rothemund, Thomas Mueller, Rainer Schobert, Bernhard Biersack, Andrea Volkamer, Michael Höpfner
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20020440
Structure and Mechanism of the Divalent Anion/Na+ Symporter
Cited by: 6
Author(s): Min Lu
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20020333
A Computational Method to Propose Mutations in Enzymes Based on Structural Signature Variation (SSV)
Cited by: 9
Author(s): Diego Mariano, Lucianna Helene Santos, Karina Machado, Adriano Velasque Werhli, Leonardo Henrique França de Lima, Raquel Cardoso de Melo‐Minardi
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20030494
New Acylglycosides Flavones from Fuzhuan Brick Tea and Simulation Analysis of Their Bioactive Effects
Cited by: 17
Author(s): Ying Lü, Yun He, Shihao Zhu, Xiaohong Zhong, Dong Chen, Zhonghua Liu
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20040835
A Novel Rare Missense Variation of the NOD2 Gene: Evidencesof Implication in Crohn’s Disease
Cited by: 7
Author(s): Sara Frade-Proud’hon-Clerc, Thomas Smol, Frédéric Frénois, Olivier Sand, Emmanuel Vaillant, Véronique Dhennin, Amélie Bonnefond, Philippe Froguel, Mathurin Fumery, Nathalie Guillon-Dellac, Corinne Gower‐Rousseau, Francis Vasseur
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20040987
Four Major Channels Detected in the Cytochrome P450 3A4: A Step toward Understanding Its Multispecificity
Cited by: 16
Author(s): Lydia Benkaidali, François André, Gautier Moroy, Bahoueddine Tangour, François Maurel, Michel Petitjean
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20040860
Shedding Light on the Interaction of Human Anti-Apoptotic Bcl-2 Protein with Ligands through Biophysical and in Silico Studies
Cited by: 21
Author(s): João Carlos Ramos, Jayaraman Muthukumaran, Filipe Freire, João Paquete-Ferreira, Ana Rita Otrelo-Cardoso, Dmitri I. Svergun, Alejandro Panjkovich, Teresa Santos‐Silva
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20051206
Molecular Characterization of Microtubule Affinity-Regulating Kinase4 from Sus scrofa and Promotion of Lipogenesis in Primary Porcine Placental Trophoblasts
Cited by: 15
Author(s): Tian Liang, Aiyou Wen, Shuang-Lin Dong, Peishi Yan
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20061269
Production and Characterization of Recombinant Wild Type Uricase from Indonesian Coelacanth (L. menadoensis) and Improvement of Its Thermostability by In Silico Rational Design and Disulphide Bridges Engineering
Cited by: 12
Author(s): Sakda Yainoy, Thanawat Phuadraksa, Sineewanlaya Wichit, Maprang Sompoppokakul, Napat Songtawee, Virapong Prachayasittikul, Chartchalerm Isarankura‐Na‐Ayudhya
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20061256
Advances in Antigenic Peptide-Based Vaccine and Neutralizing Antibodies against Viruses Causing Hand, Foot, and Mouth Disease
Cited by: 24
Author(s): Mohd Ishtiaq Anasir, Chit Laa Poh
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms20081812
Leishmania infantum β-Tubulin Identified by Reverse Engineering Technology through Phage Display Applied as Theranostic Marker for Human Visceral Leishmaniasis
Cited by: 11
Author(s): Lourena E. Costa, Patrícia Terra Alves, Ana Carneiro, Ana Carolina S. Dias, Patrícia Tiemi Fujimura, Glaucy Rodrigues de Araújo, Grasiele S.V. Tavares, Fernanda F. Ramos, Mariana C. Duarte, Daniel Menezes‐Souza, Peter Briza, Fátima F Briza, Eduardo Anton̂io Ferraz Coelho, Luiz Ricardo Goulart
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20081864
Characterization and Dye Decolorization Potential of Two Laccases from the Marine-Derived Fungus Pestalotiopsis sp.
Cited by: 27
Author(s): Saowanee Wikee, Juliette Hatton, Annick Turbé-Doan, Yann Mathieu, Mariane Daou, Anne Lomascolo, Abhishek Kumar, Saisamorn Lumyong, Giuliano Sciara, Craig B. Faulds, Éric Record
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20092231
Molecular and Structural Basis of the Proteasome α Subunit Assembly Mechanism Mediated by the Proteasome-Assembling Chaperone PAC3-PAC4 Heterodimer
Cited by: 14
Author(s): Tadashi Satoh, Maho Yagi-Utsumi, Kenta Okamoto, Eiji Kurimoto, Keiji Tanaka, Koichi Kato
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20092143
Biochemical Characterization of a New β-Agarase from Cellulophaga Algicola
Cited by: 10
Author(s): Zhenggang Han, Yuxi Zhang, Jiangke Yang
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20092274
Hidden Aggregation Hot-Spots on Human Apolipoprotein E: A Structural Study
Cited by: 8
Author(s): Paraskevi L. Tsiolaki, Aikaterini D. Katsafana, Fotis A. Baltoumas, Nikolaos Louros, Vassiliki A. Iconomidou
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20092284
Characterizing a Halo-Tolerant GH10 Xylanase from Roseithermus sacchariphilus Strain RA and Its CBM-Truncated Variant
Cited by: 24
Author(s): Seng Chong Teo, Kok Jun Liew, Mohd Shahir Shamsir, Chun Shiong Chong, Neil C. Bruce, Kok‐Gan Chan, Kian Mau Goh
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20092291
Molecular Characterization, Bioinformatic Analysis, and Expression Profile of Lin-28 Gene and Its Protein from Arabian Camel (Camelus dromedarius)
Cited by: 3
Author(s): Sultan N. Alharbi, Ibtehal S. Alduhaymi, Lama Alqahtani, Musaad A. Altammaami, Fahad M. Alhoshani, Deema K Alrabiah, Saleh O. Alyemni, Khulud A. Alsulami, Waleed Alghamdi, Mohannad Fallatah
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20102460
Structural Insights into the Molecular Evolution of the Archaeal Exo-β-d-Glucosaminidase
Cited by: 2
Author(s): Shouhei Mine, Masahiro Watanabe
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20102572
Physiological, Structural, and Functional Analysis of the Paralogous Cation–Proton Antiporters of NhaP Type from Vibrio cholerae
Cited by: 8
Author(s): Muntahi Mourin, Alvan Wai, Joe D. J. OʼNeil, Georg Hausner, Pavel Dibrov
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20112643
Transcriptome Analysis of Clinopodium chinense (Benth.) O. Kuntze and Identification of Genes Involved in Triterpenoid Saponin Biosynthesis
Cited by: 9
Author(s): Yuanyuan Shi, Shengxiang Zhang, Daiyin Peng, Chenkai Wang, Derui Zhao, Kelong Ma, Jiawen Wu, Luqi Huang
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20112689
Luteolin-7-O-β-d-Glucoside Inhibits Cellular Energy Production Interacting with HEK2 in Keratinocytes
Cited by: 15
Author(s): Ramona Palombo, Sabrina Caporali, Mattia Falconi, Federico Iacovelli, Blasco Morozzo della Rocca, Alessandro Lo Surdo, Elena Campione, Eleonora Candi, Gerry Melino, Sergio Bernardini, Alessandro Terrinoni
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20122962
Analysis of the TP53 Deleterious Single Nucleotide Polymorphisms Impact on Estrogen Receptor Alpha-p53 Interaction: A Machine Learning Approach
Cited by: 8
Author(s): Kumaraswamy Naidu Chitrala, Mitzi Nagarkatti, Prakash Nagarkatti, Y. Suneetha
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20133184
Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase from Streptomyces griseoflavus Ac-993
Cited by: 18
Author(s): А.Г. Габдулхаков, Ilya Kolyadenko, Olga Kostareva, Alisa Mikhaylina, Paulo Oliveira, Paula Tamagnini, A. V. Lisov, Svetlana Tishchenko
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms20143477
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Author(s): M. Alcolea Palafox, A. Milton Franklin Benial, V. K. Rastogi
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The Role of Cysteine Cathepsins in Cancer Progression and Drug Resistance
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Author(s): Magdalena Rudzińska, Alessandro Parodi, Surinder M. Soond, А.З. Винаров, Dmitry Korolev, Andrey Morozov, Cenk Dağlıoğlu, Yusuf Tutar, Andrey A. Zamyatnin
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Published: almost 7 years ago
10.3390/ijms20143382
Epileptic Encephalopathy In A Patient With A Novel Variant In The Kv7.2 S2 Transmembrane Segment: Clinical, Genetic, and Functional Features
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Author(s): Maria Virginia Soldovieri, Paolo Ambrosino, Ilaria Mosca, Francesco Miceli, Cristina Franco, Lorella M.T. Canzoniero, Beth M. Kline‐Fath, Edward C. Cooper, Charu Venkatesan, Maurizio Taglialatela
Software Mentions: 1
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10.3390/ijms20143464
Diagnostic Performance of Dengue Virus Envelope Domain III in Acute Dengue Infection
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Author(s): Ngoc Minh Nguyen, Bao Tuan Duong, Mudsser Azam, Truong Thai Phuong, Hyun Park, Phùng Thị Bích Thủy, Seon‐Ju Yeo
Software Mentions: 1
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10.3390/ijms20153732
A Novel Adenosine Kinase from Bombyx mori: Enzymatic Activity, Structure, and Biological Function
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Author(s): Kai Song, Li Yu, Huawei He, Lina Liu, Ping Zhao, Qingyou Xia, Yejing Wang
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Tetracycline Analogs Inhibit Osteoclast Differentiation by Suppressing MMP-9-Mediated Histone H3 Cleavage
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Author(s): Yeojin Kim, Jin Man Kim, Hye-Rim Lee, Woo‐Ri Shin, Sheunghun Lee, Jisu Lee, Jaeil Park, Byung Hak Jhun, Yang‐Hoon Kim, Sun‐Ju Yi, Kyung-Hwan Kim
Software Mentions: 1
Published: almost 7 years ago
10.3390/ijms20163906
Structural Comparison of a Promiscuous and a Highly Specific Sucrose 6F-Phosphate Phosphorylase
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Author(s): Jorick Franceus, N. Capra, Tom Desmet, A.M.W.H. Thunnissen
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10.3390/ijms20174164
β-Glucose-1,6-Bisphosphate Stabilizes Pathological Phophomannomutase2 Mutants In Vitro and Represents a Lead Compound to Develop Pharmacological Chaperones for the Most Common Disorder of Glycosylation, PMM2-CDG
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Author(s): Maria Monticelli, Ludovica Liguori, Mariateresa Allocca, Giuseppina Andreotti, Maria Vittoria Cubellis
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10.3390/ijms20174078
Different Dynamics in 6aJL2 Proteins Associated with AL Amyloidosis, a Conformational Disease
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Author(s): Roberto Maya-Martinez, Leidys French-Pacheco, Gilberto Valdés-García, Nina Pastor, Carlos Amero
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A Free Web-Based Protocol to Assist Structure-Based Virtual Screening Experiments
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Author(s): Nathalie Lagarde, Elodie Goldwaser, Tania Pencheva, Dessislava Jereva, Ilza Pajeva, Julien Rey, Pierre Tufféry, Bruno O. Villoutreix, Maria A. Miteva
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10.3390/ijms20184636
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Author(s): B P Thornton, Anna Johns, Reem Al-Shidhani, Sandra Álvarez-Carretero, Isabelle S R Storer, Michael Bromley, Lydia Tabernero
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10.3390/ijms20184394
Crystal Structures of Pyrophosphatase from Acinetobacter baumannii: Snapshots of Pyrophosphate Binding and Identification of a Phosphorylated Enzyme Intermediate
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Author(s): Yunlong Si, Xing Wang, Guosong Yang, Tong Yang, Yuying Li, Gabriela Jaramillo Ayala, Xumin Li, Hao Wang, Jian-An Su
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10.3390/ijms20184643
Discovery of a Ruthenium Complex for the Theranosis of Glioma through Targeting the Mitochondrial DNA with Bioinformatic Methods
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Author(s): Le Zhang, Chen Fu, Li Jin, Zizhen Zhao, Yixue Hou, Wei Zhou, Ailing Fu
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Sequence and Structural Analysis of AA9 and AA10 LPMOs: An Insight into the Basis of Substrate Specificity and Regioselectivity
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Chirality-Dependent Adsorption between Amphipathic Peptide and POPC Membrane
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Author(s): Ke Chen, Yinghong Sheng, Jun Wang, Wei Wang
Software Mentions: 1
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Author(s): Laura Kalveram, Gunnar Kleinau, Kamila Szymańska, Patrick Scheerer, Adolfo Rivero-Müller, Annette Grüters-Kieslich, Heike Biebermann
Software Mentions: 1
Published: over 6 years ago
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An Ancient Mutation in the TPH1 Gene is Consistent with the Changes in Mammalian Reproductive Rhythm
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Author(s): Chenhui Liu, Xunping Jiang, Guiqiong Liu, Teketay Wassie, Shishay Girmay
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10.3390/ijms20236019
Molecular Cavity Topological Representation for Pattern Analysis: A NLP Analogy-Based Word2Vec Method
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Author(s): Dongliang Guo, Qiaoqiao Wang, Meng Liang, Wei Liu, Junlan Nie
Software Mentions: 1
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10.3390/ijms20246121
Structure and Location Studies on Key Enzymes in Saponins Biosynthesis of Panax notoginseng
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Author(s): Pengguo Xia, Yujie Zheng, Zongsuo Liang
Software Mentions: 1
Published: over 6 years ago
10.3390/ijms20246161
Development of a Highly Efficient Hybrid Peptide That Increases Immunomodulatory Activity Via the TLR4-Mediated Nuclear Factor-κB Signaling Pathway
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10.3390/ijms20246308
Reductive Activity and Mechanism of Hypoxia- Targeted AGT Inhibitors: An Experimental and Theoretical Investigation
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10.3390/ijms21010147
On-Membrane Dynamic Interplay between Anti-GM1 IgG Antibodies and Complement Component C1q
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Published: over 6 years ago
10.3390/ijms21010074
Computational Disorder Analysis in Ethylene Response Factors Uncovers Binding Motifs Critical to Their Diverse Functions
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Author(s): Xiao Sun, Nawar Malhis, Bi Zhao, Bin Xue, Joerg Gsponer, Erik H. A. Rikkerink
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10.3390/ijms21010361
Elucidation of Molecular Mechanism of a Selective PPARα Modulator, Pemafibrate, through Combinational Approaches of X-ray Crystallography, Thermodynamic Analysis, and First-Principle Calculations
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Author(s): Mayu Kawasaki, Akira Kambe, Yuta Yamamoto, Sundaram Arulmozhiraja, Sohei Ito, Yoshimi Nakagawa, Hiroaki Tokiwa, Shogo Nakano, Hitoshi Shimano
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10.3390/ijms21010344
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Author(s): Angelica Benavides-Serrato, Jacquelyn T Saunders, Brent Holmes, Robert N. Nishimura, Alan Lichtenstein, Joseph Gera
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Published: over 6 years ago
10.3390/ijms21020427
Uncovering the Pharmacological Mechanism of Stemazole in the Treatment of Neurodegenerative Diseases Based on a Network Pharmacology Approach
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Author(s): Jing Zhang, Huajun Li, Yubo Zhang, Chenyang Zhao, Yizi Zhu, Mei Han
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Published: over 6 years ago
10.3390/ijms21020648
Identification of a Novel Linear B-Cell Epitope on the Nucleocapsid Protein of Porcine Deltacoronavirus
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Author(s): Jiayu Fu, Chen Rui, Jingfei Hu, Huan Qu, Yujia Zhao, Sanjie Cao, Xintian Wen, Yiping Wen, Rui Wu, Qin Zhao, Xiaoping Ma, Xiaobo Huang
Software Mentions: 1
Published: over 6 years ago