10.1371/journal.pone.0143107

Negative Feedbacks by Isoprenoids on a Mevalonate Kinase Expressed in the Corpora Allata of Mosquitoes
Cited by: 12
Author(s): Pratik Nyati, Crisalejandra Rivera-Pérez, Fernando G. Noriega
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0020445

Identification of antifreeze proteins and their functional residues by support vector machine and genetic algorithms based on n-peptide compositions.
Cited by: 31
Author(s): Chao Yu, Chih-Hao Lu
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0136239

Structure of the Glycosyltransferase Ktr4p from Saccharomyces cerevisiae
Cited by: 7
Author(s): D.D.D. Possner, Magnus Claesson, Jodie E. Guy
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0066889

SERPINA2 Is a Novel Gene with a Divergent Function from SERPINA1
Cited by: 6
Author(s): Patrícia Marques, Zélia Ferreira, Manuella Martins, Joana Figueiredo, Diana Isabel Silva, Patrícia Castro, Ramiro Morales‐Hojas, Joana Simões‐Correia, Susana Seixas
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0134056

N-Terminal Coiled-Coil Structure of ATPase Subunits of 26S Proteasome Is Crucial for Proteasome Function
Cited by: 8
Author(s): Tomonao Inobe, Reiko Genmei
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0006163

Discovery of a Novel Prolactin in Non-Mammalian Vertebrates: Evolutionary Perspectives and Its Involvement in Teleost Retina Development
Cited by: 45
Author(s): Xigui Huang, Michelle Hui, Yun Liu, Don Yuen, Yong Zhang, Wood Yee Chan, Haoran Lin, Shuk Han Cheng, Christopher H. K. Cheng
Software Mentions: 1
Published: about 17 years ago

10.1371/journal.pone.0231542

Unveiling functional motions based on point mutations in biased signaling systems: A normal mode study on nerve growth factor bound to TrkA
Cited by: 5
Author(s): Pedro T. Resende-Lara, David Pérahia, Ana Lígia Scott, Antônio Sérgio Kimus Braz
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0154056

New Cysteine-Rich Ice-Binding Protein Secreted from Antarctic Microalga, Chloromonas sp.
Cited by: 17
Author(s): Woo‐Sik Jung, Robert L. Campbell, Yunho Gwak, Jong Im Kim, Peter L. Davies, EonSeon Jin
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0086083

Critical Amino Acids within the Human Immunodeficiency Virus Type 1 Envelope Glycoprotein V4 N- and C-Terminals Contribute to Virus Entry
Cited by: 12
Author(s): Yan Li, Dan Yang, Jiaye Wang, Yuan Yao, Weizhe Zhang, Lu-Jing Wang, De Cheng, Fengkun Yang, Fengmin Zhang, Min Zhuang, Hong Ling
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0033291

Characterization of a Novel Binding Protein for Fortilin/TCTP — Component of a Defense Mechanism against Viral Infection in Penaeus monodon
Cited by: 8
Author(s): Tanate Panrat, Patuma Sinthujaroen, Benjamas Nupan, Warapond Wanna, Martti T. Tammi, Amornrat Phongdara
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0100165

Insulin-Like Growth Factor 2 Silencing Restores Taxol Sensitivity in Drug Resistant Ovarian Cancer
Cited by: 33
Author(s): Jurriaan Brouwer‐Visser, Jiyeon Lee, Kelly Anne McCullagh, M. Cossio, Yanhua Wang, Gloria S. Huang
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0146393

PLGA-Curcumin Attenuates Opioid-Induced Hyperalgesia and Inhibits Spinal CaMKIIα
Cited by: 16
Author(s): Xiaoyu Hu, Fang Huang, Magdalena Szymusiak, Xiaojing Tian, Ying Liu, Zaijie Jim Wang
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0156218

Crystal Structure of the FERM-SH2 Module of Human Jak2
Cited by: 30
Author(s): Randall McNally, A.V. Toms, Michael J. Eck
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0135448

Structural Analysis of the Rubisco-Assembly Chaperone RbcX-II from Chlamydomonas reinhardtii
Cited by: 13
Author(s): A. Bracher, Thomas R. Hauser, Cuimin Liu, F. Ulrich Hartl, Manajit Hayer‐Hartl
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0007258

Masitinib (AB1010), a Potent and Selective Tyrosine Kinase Inhibitor Targeting KIT
Cited by: 329
Author(s): Patrice Dubreuil, Sébastien Létard, Marco A. Ciufolini, Laurent Gros, M. Humbert, Nathalie Castéran, Laurence Borge, Bérengère Hajem, Anne Lermet, Wolfgang Sippl, Edwige Voisset, Michel Arock, Christian Auclair, Phillip S. Leventhal, Colin D. Mansfield, Alain Moussy, Olivier Hermine
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0012029

Optimized Hydrophobic Interactions and Hydrogen Bonding at the Target-Ligand Interface Leads the Pathways of Drug-Designing
Cited by: 313
Author(s): R. R. Patil, S. Das, Ashley Stanley, Lumbani Yadav, Akulapalli Sudhakar, Ashok K. Varma
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0060602

Mapping Enzymatic Catalysis Using the Effective Fragment Molecular Orbital Method: Towards all ab initio Biochemistry
Cited by: 33
Author(s): Casper Steinmann, Dmitri G. Fedorov, Jan H. Jensen
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0179983

Generation of a rabbit single-chain fragment variable (scFv) antibody for specific detection of Bradyrhizobium sp. DOA9 in both free-living and bacteroid forms
Cited by: 8
Author(s): Nguyễn Xuân Vũ, Natcha Pruksametanan, Witsanu Srila, Watcharin Yuttavanichakul, Kamonluck Teamtisong, Neung Teaumroong, Nantakorn Boonkerd, Panlada Tittabutr, Montarop Yamabhai
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0109354

BioGPS Descriptors for Rational Engineering of Enzyme Promiscuity and Structure Based Bioinformatic Analysis
Cited by: 17
Author(s): Virgilio F. Ferrario, Lydia Siragusa, Cynthia Ebert, Massimo Baroni, Marco Foscato, Gabriele Cruciani, Lucia Gardossi
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0017055

Histidine Hydrogen-Deuterium Exchange Mass Spectrometry for Probing the Microenvironment of Histidine Residues in Dihydrofolate Reductase
Cited by: 28
Author(s): Masaru Miyagi, Qun Wan, Md. Faiz Ahmad, Giridharan Gokulrangan, Sara E. Tomechko, Brad C. Bennett, Chris Dealwis
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0113294

Design and Development of a Novel Vaccine for Protection against Lyme Borreliosis
Cited by: 45
Author(s): Pär Comstedt, Markus Hanner, Wolfgang Schüler, Andreas Meinke, Urban Lundberg
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0018300

Biochemical and Structural Properties of Cyanases from Arabidopsis thaliana and Oryza sativa
Cited by: 27
Author(s): Dawei Qian, Lin Jiang, Lu Lu, Chunhong Wei, Li Yi
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0043788

Atomistic Mechanism of MicroRNA Translation Upregulation via Molecular Dynamics Simulations
Cited by: 14
Author(s): Yaguang Wei, Fang Qin, Jian Zhang, Ray Luo, Haifeng Chen
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0075582

Putative Bioactive Motif of Tritrpticin Revealed by an Antibody with Biological Receptor-Like Properties
Cited by: 8
Author(s): Raghava Sharma, Suvendu Lomash, Dinakar M. Salunke
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0108946

Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL
Cited by: 18
Author(s): Aránzazu Gallego-García, Yasmina Mirassou, Diana García‐Moreno, Montserrat Elı́as-Arnanz, María Ángeles Sánchez Jiménez, S. Padmanabhan
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0241728

PharmaNet: Pharmaceutical discovery with deep recurrent neural networks
Cited by: 5
Author(s): Paola Ruiz Puentes, Natalia Valderrama, Cristina González, Laura Daza, Carolina Muñoz-Camargo, Juan C. Cruz, Pablo Arbeláez
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0020872

Anchored Design of Protein-Protein Interfaces
Cited by: 59
Author(s): Steven M. Lewis, Brian Kuhlman
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0119608

Glycans Flanking the Hypervariable Connecting Peptide between the A and B Strands of the V1/V2 Domain of HIV-1 gp120 Confer Resistance to Antibodies That Neutralize CRF01_AE Viruses
Cited by: 14
Author(s): Sara M. O’Rourke, Ruengpung Sutthent, Pham Phung, Kathryn A. Mesa, Normand L. Frigon, Briana To, Navin Horthongkham, Kay Limoli, Terri Wrin, Phillip W. Berman
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0223773

Engineering a single-chain antibody against Trypanosoma cruzi metacyclic trypomastigotes to block cell invasion
Cited by: 4
Author(s): Lara Maria Kalempa Demeu, Rodrigo Jahn Soares, Juliana Severo Miranda, Lisandro Pacheco-Lugo, Kelin Gonçalves de Oliveira, Cristian Andrés Cortez Plaza, Philippe Billiald, Juliana de Moura, Nobuko Yoshida, Larissa M. Alvarenga, Wanderson D. DaRocha
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0096536

The Tertiary Origin of the Allosteric Activation of E. coli Glucosamine-6-Phosphate Deaminase Studied by Sol-Gel Nanoencapsulation of Its T Conformer
Cited by: 4
Author(s): Sergio Zonszein, Laura I. Álvarez‐Añorve, Roberto J. Vázquez-Núñez, Mario L. Calcagno
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0201922

Structures of NHBA elucidate a broadly conserved epitope identified by a vaccine induced antibody
Cited by: 5
Author(s): Martina Maritan, Daniele Veggi, Roberta Cozzi, Lucia Dello Iacono, Erika Bartolini, Paola Lo Surdo, Giulietta Maruggi, Glen Spraggon, Matthew J. Bottomley, E. Malito
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0024766

Modulation of Catalytic Activity in Multi-Domain Protein Tyrosine Phosphatases
Cited by: 12
Author(s): L.L. Madan, Shivamurthy Veeranna, Khader Shameer, Chilamakuri Chandra Sekhar Reddy, Ramanathan Sowdhamini, B. Gopal
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0025118

Comparative Analysis of Species-Specific Ligand Recognition in Toll-Like Receptor 8 Signaling: A Hypothesis
Cited by: 47
Author(s): Rajiv Gandhi Govindaraj, Balachandran Manavalan, Shaherin Basith, Sangdun Choi
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0082020

Conformational Polymorphism of m7GTP in Crystal Structure of the PB2 Middle Domain from Human Influenza A Virus
Cited by: 8
Author(s): Toshiharu Tsurumura, Hao Qiu, Toru Yoshida, Yayoi Tsumori, Dai Hatakeyama, Takashi Kuzuhara, Hideaki Tsuge
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0065045

Transient Oligomerization of the SARS-CoV N Protein – Implication for Virus Ribonucleoprotein Packaging
Cited by: 100
Author(s): Chung-ke Chang, Chia Min Michael Chen, Ming Hui Chiang, Yen Lan Hsu, Tai Huang Huang
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0043863

Crystal Structures of Archaemetzincin Reveal a Moldable Substrate-Binding Site
Cited by: 4
Author(s): Christine Graef, M. Schacherl, S. Waltersperger, Ulrich Baumann
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0025317

Obesity Risk Gene TMEM18 Encodes a Sequence-Specific DNA-Binding Protein
Cited by: 28
Author(s): Jaana Jurvansuu, Adrian Goldman
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0009990

Detection and Architecture of Small Heat Shock Protein Monomers
Cited by: 76
Author(s): Pierre Poulain, Jean‐Christophe Gelly, Delphine Flatters
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0173767

Streptococcus suis sortase A is Ca2+ independent and is inhibited by acteoside, isoquercitrin and baicalin
Cited by: 8
Author(s): Fuguang Chen, Fang Xie, Baoxue Yang, Yuming Wang, Siguo Liu, Yueling Zhang
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0237181

Comprehensive genome based analysis of Vibrio parahaemolyticus for identifying novel drug and vaccine molecules: Subtractive proteomics and vaccinomics approach
Cited by: 14
Author(s): Mahmudul Hasan, Kazi Faizul Azim, Abdus Shukur Imran, Ishtiak Malique Chowdhury, Shah Rucksana Akhter Urme, Sorwer Alam Parvez, Md. Bashir Uddin, Syed Sayeem Uddin Ahmed
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0043437

Random Mutagenesis Reveals Residues of JAK2 Critical in Evading Inhibition by a Tyrosine Kinase Inhibitor
Cited by: 23
Author(s): Michael R. Marit, Manprit Chohan, Natasha Matthew, Kai Huang, D.A. Kuntz, David R. Rose, Dwayne L. Barber
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0052732

Prime-Boost Immunization of Rabbits with HIV-1 gp120 Elicits Potent Neutralization Activity against a Primary Viral Isolate
Cited by: 16
Author(s): Kristin Narayan, Nitish Agrawal, Sean X. Du, Janelle Muranaka, Katherine W. Bauer, Daniel P. Leaman, Pham Phung, Kay Limoli, Helen Chen, Rebecca I. Boenig, Terri Wrin, Michael B. Zwick, Robert G. Whalen
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0123567

Crystal Structure of Plasmodium knowlesi Apical Membrane Antigen 1 and Its Complex with an Invasion-Inhibitory Monoclonal Antibody
Cited by: 15
Author(s): B. Vulliez-Le Normand, Bart W. Faber, F.A. Saul, Marjolein van der Eijk, Alan W. Thomas, Balbir Singh, Clemens H. M. Kocken, G.A. Bentley
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0089116

Structural Analysis of Viral Infectivity Factor of HIV Type 1 and Its Interaction with A3G, EloC and EloB
Cited by: 16
Author(s): Kauȇ Santana da Costa, Élcio Leal, Alberto Monteiro dos Santos, Anderson Henrique Lima e Lima, Cláudio Nahum Alves, Jerônimo Lameira
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0184797

A single point mutation in a TssB/VipA homolog disrupts sheath formation in the type VI secretion system of Proteus mirabilis
Cited by: 12
Author(s): Christina C. Saak, Martha A. Zepeda-Rivera, Karine A. Gibbs
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0199559

Escherichia coli β-clamp slows down DNA polymerase I dependent nick translation while accelerating ligation
Cited by: 7
Author(s): Anurag Bhardwaj, Debarghya Ghose, Krishan Gopal Thakur, Dipak Dutta
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0032741

Secretion and N-Linked Glycosylation Are Required for Prostatic Acid Phosphatase Catalytic and Antinociceptive Activity
Cited by: 11
Author(s): Julie K. Hurt, Brendan Fitzpatrick, Jacqueline Norris-Drouin, Mark J. Zylka
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0077786

Fatty Acids are Key in 4-Hydroxy-2-Nonenal-Mediated Activation of Uncoupling Proteins 1 and 2
Cited by: 34
Author(s): Elena A. Malingriaux, Anne Rupprecht, Lars Gille, Olga Jovanović, Petr Ježek, Martin Jabůrek, Elena E. Pohl
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0081489

DB-02, a C-6-Cyclohexylmethyl Substituted Pyrimidinone HIV-1 Reverse Transcriptase Inhibitor with Nanomolar Activity, Displays an Improved Sensitivity against K103N or Y181C Than S-DABOs
Cited by: 20
Author(s): Xing-Jie Zhang, Li-He Lu, Ruirui Wang, Yueping Wang, Rong-Hua Luo, Christopher C. Lai, Liu‐Meng Yang, Yan‐Ping He, Yong‐Tang Zheng
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0124655

A Novel Quantitative Hemolytic Assay Coupled with Restriction Fragment Length Polymorphisms Analysis Enabled Early Diagnosis of Atypical Hemolytic Uremic Syndrome and Identified Unique Predisposing Mutations in Japan
Cited by: 39
Author(s): Yoko Yoshida, Toshiyuki Miyata, Masanori Matsumoto, Hiroko Shirotani-Ikejima, Yumiko Uchida, Yoshifumi Ohyama, Tetsuro Kokubo, Yoshihiro Fujimura
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0184722

Structural signatures of thermal adaptation of bacterial ribosomal RNA, transfer RNA, and messenger RNA
Cited by: 14
Author(s): Clara Jégousse, Yuedong Yang, Jian Zhan, Jihua Wang, Yaoqi Zhou
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0123428

Tailor-Made Ezrin Actin Binding Domain to Probe Its Interaction with Actin In-Vitro
Cited by: 7
Author(s): Rohini Shrivastava, D Köster, Sheetal S. Kalme, Satyajit Mayor, Muniasamy Neerathilingam
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0084403

Celiac Anti-Type 2 Transglutaminase Antibodies Induce Phosphoproteome Modification in Intestinal Epithelial Caco-2 Cells
Cited by: 12
Author(s): Gaetana Paolella, Ivana Caputo, Anna Marabotti, Marilena Lepretti, Anna Maria Salzano, Andrea Scaloni, Monica Vitale, Nicola Zambrano, Daniele Sblattero, Carla Esposito
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0043522

Crystallographic Study of Novel Transthyretin Ligands Exhibiting Negative-Cooperativity between Two Thyroxine Binding Sites
Cited by: 20
Author(s): Divya Rana Tomar, Tarique Khan, Rajeev R. Singh, Satyendra Mishra, Sarika Gupta, Avadhesha Surolia, Dinakar M. Salunke
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0035203

Development of a Tetrameric Streptavidin Mutein with Reversible Biotin Binding Capability: Engineering a Mobile Loop as an Exit Door for Biotin
Cited by: 24
Author(s): Valerie J. O'Sullivan, Isabelle Barrette-Ng, Eric Hommema, Greg T. Hermanson, Mark Schofield, Sau‐Ching Wu, Claudia Honetschlaeger, Kenneth Ng, Sui‐Lam Wong
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0050488

Crystal Structure of Circular Permuted RoCBM21 (CP90): Dimerisation and Proximity of Binding Sites
Cited by: 4
Author(s): Preyesh Stephen, Kuo-Chang Cheng, Ping‐Chiang Lyu
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0069411

Tuning of Thioredoxin Redox Properties by Intramolecular Hydrogen Bonds
Cited by: 11
Author(s): Åsmund K. Røhr, Marta Hammerstad, K. Kristoffer Andersson
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0182306

Molecular evolutionary patterns of NAD+/Sirtuin aging signaling pathway across taxa
Cited by: 8
Author(s): Uma Gaur, Jianbo Tu, Diyan Li, Yue Gao, Ting Lian, Boyuan Sun, Dapeng Yang, Xiaolan Fan, Mingyao Yang
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0096749

Molecular Imaging of Cell Death in Tumors. Increasing Annexin A5 Size Reduces Contribution of Phosphatidylserine-Targeting Function to Tumor Uptake
Cited by: 7
Author(s): Lisette Ungethüm, Martijn L. Chatrou, Dennis H. M. Kusters, Leon J. Schurgers, Chris Reutelingsperger
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0020342

Isolation of Thylakoid Membrane Complexes from Rice by a New Double-Strips BN/SDS-PAGE and Bioinformatics Prediction of Stromal Ridge Subunits Interaction
Cited by: 23
Author(s): Jinzhen Shao, Yubo Zhang, Jianlan Yu, Lin Guo, Yi Ding
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0001025

Normal-Mode-Analysis–Monitored Energy Minimization Procedure for Generating Small–Molecule Bound Conformations
Cited by: 10
Author(s): Qi Wang, Yuan Ping Pang
Software Mentions: 1
Published: almost 19 years ago

10.1371/journal.pone.0055793

Computational Analysis of KRAS Mutations: Implications for Different Effects on the KRAS p.G12D and p.G13D Mutations
Cited by: 57
Author(s): Chih-Chieh Chen, Tze‐Kiong Er, Yen‐Yi Liu, Jiann Yang Hwang, María Jesús Casado Barrio, María Luisa Jiménez Rodrigo, Enrique García-Toro, Marta Herreros-Villanueva
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0169432

Nuclear Pore-Like Structures in a Compartmentalized Bacterium
Cited by: 24
Author(s): Evgeny Sagulenko, Amanda Nouwens, Richard I. Webb, Kathryn Green, Benjamin Yee, Garry Morgan, Andrew Leis, Kuo Chang Lee, Margaret K. Butler, Nicholas Chia, Uyen Thi Phuong Pham, Stinus Lindgreen, Ryan Catchpole, Anthony M. Poole, John A. Fuerst
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0024158

Pseudomonas aeruginosa 4-Amino-4-Deoxychorismate Lyase: Spatial Conservation of an Active Site Tyrosine and Classification of Two Types of Enzyme
Cited by: 12
Author(s): P.E.F. O'Rourke, T.C. Eadsforth, Paul K. Fyfe, Sharon M. Shepherd, William N. Hunter
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0148432

Genomic Signatures for Avian H7N9 Viruses Adapting to Humans
Cited by: 30
Author(s): Guang-Wu Chen, Shu-Ming Kuo, Shu-Li Yang, Yu-Nong Gong, Mei-Ren Hsiao, Yichun Liu, Shin‐Ru Shih, Kuo‐Chien Tsao
Software Mentions: 1
Published: over 10 years ago

10.3390/cancers10040112

Construction and Characterization of a Humanized Anti-Epstein-Barr Virus gp350 Antibody with Neutralizing Activity in Cell Culture
Cited by: 7
Author(s): Jerome E. Tanner, Jing S. Hu, Caroline Alfieri
Software Mentions: 1
Published: over 8 years ago

10.3390/cancers12020315

Dephosphorylation of YB-1 is Required for Nuclear Localisation During G2 Phase of the Cell Cycle
Cited by: 16
Author(s): Sunali Mehta, Cushla McKinney, Michael Algie, Chandra Verma, Srinivasaraghavan Kannan, Rhodri Harfoot, Tara K. Bartolec, Puja Bhatia, Alistair J. Fisher, Maree Gould, Kim H. Parker, Anthony J. Cesare, Heather E. Cunliffe, Scott B. Cohen, Torsten Kleffmann, Antony W. Braithwaite, Adele G. Woolley
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers11070963

Machilin A Inhibits Tumor Growth and Macrophage M2 Polarization Through the Reduction of Lactic Acid
Cited by: 21
Author(s): Tae‐Wook Chung, Eun-Yeong Kim, Chang Woo Han, So Young Park, Mi Suk Jeong, Dahye Yoon, Hee‐Jung Choi, LJ Jin, Mi-Ju Park, Yun Ju Kwon, Hanna Lee, Keuk‐Jun Kim, Kang Hyun Park, Suhkmann Kim, Se Bok Jang, Ki‐Tae Ha
Software Mentions: 1
Published: about 7 years ago

10.3390/cancers11050712

Huzhangoside A Suppresses Tumor Growth through Inhibition of Pyruvate Dehydrogenase Kinase Activity
Cited by: 15
Author(s): Choong Hwan Kwak, Jung‐Hee Lee, Eun-Yeong Kim, Chang Woo Han, Keuk‐Jun Kim, Hanna Lee, MyoungLae Cho, Se Bok Jang, Cheorl-Ho Kim, Tae‐Wook Chung, Ki‐Tae Ha
Software Mentions: 1
Published: about 7 years ago

10.3390/cancers13164083

The Dimeric Form of HPV16 E6 Is Crucial to Drive YAP/TAZ Upregulation through the Targeting of hScrib
Cited by: 7
Author(s): Lorenzo Messa, Marta Celegato, Chiara Bertagnin, Beatrice Mercorelli, Gualtiero Alvisi, Lawrence Banks, Giorgio Palù, Arianna Loregian
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers13133344

Structural and Drug Targeting Insights on Mutant p53
Cited by: 33
Author(s): Ana Gomes, Helena Ramos, Alberto Inga, Emı́lia Sousa, Lucı́lia Saraiva
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers13020190

Cold-Shock Domains—Abundance, Structure, Properties, and Nucleic-Acid Binding
Cited by: 30
Author(s): Udo Heinemann, Yvette Roske
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers13092077

A Special View of What Was Almost Forgotten: p38δ MAPK
Cited by: 9
Author(s): Débora Bublitz Anton, Luís Fernando Saraiva Macedo Timmers, Stefan Laufer, Márcia Inês Goettert
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11121888

Enhanced Hsa-miR-181d/p-STAT3 and Hsa-miR-181d/p-STAT5A Ratios Mediate the Anticancer Effect of Garcinol in STAT3/5A-Addicted Glioblastoma
Cited by: 25
Author(s): Hengwei Liu, Peter Mingjui Lee, Oluwaseun Adebayo Bamodu, Yu-Kai Su, Iat-Hang Fong, Chi Tai Yeh, Ming‐Hsien Chien, I-Hung Kan, Chien Min Lin
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers10100358

Ovarian Tumor Microenvironment Signaling: Convergence on the Rac1 GTPase
Cited by: 19
Author(s): Laurie G. Hudson, Jennifer M. Gillette, Huining Kang, Melanie Rivera, Angela Wandinger‐Ness
Software Mentions: 1
Published: almost 8 years ago

10.3390/cancers11030364

Cucurbitacin D Reprograms Glucose Metabolic Network in Prostate Cancer
Cited by: 22
Author(s): Mohammed Sikander, Shabnam Malik, Neeraj Chauhan, Parvez Κhan, Sonam Kumari, Vivek K. Kashyap, Sheema Khan, Aditya Ganju, Fathi T. Halaweish, Murali M. Yallapu, Meena Jaggi, Subhash C. Chauhan
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers13030579

Oxidation of Innate Immune Checkpoint CD47 on Cancer Cells with Non-Thermal Plasma
Cited by: 23
Author(s): Abraham Lin, Jamoliddin Razzokov, Hanne Verswyvel, Angela Privat-Maldonado, Joey De Backer, Maksudbek Yusupov, Edgar Cardenas De La Hoz, Peter Ponsaerts, Evelien Smits, Annemie Bogaerts
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11091336

XIAP as a Target of New Small Organic Natural Molecules Inducing Human Cancer Cell Death
Cited by: 11
Author(s): Diego A. Muñoz, Martina Brucoli, Silvia Zecchini, Adrián G. Sandoval-Hernández, Gonzálo Arboleda, Fabián López-Vallejo, Wilman Delgado, Matteo Giovarelli, Marco Coazzoli, Elisabetta Catalani, Clara De Palma, Cristiana Perrotta, Luís Enríque Cuca Suárez, Emilio Clementi, Davide Cervia
Software Mentions: 1
Published: almost 7 years ago

10.3390/cancers12123717

Differential Effects of IGF-1R Small Molecule Tyrosine Kinase Inhibitors BMS-754807 and OSI-906 on Human Cancer Cell Lines
Cited by: 18
Author(s): María Fuentes-Baile, María Paz Ventero, José Antonio Encinar, Pilar García-Morales, María Poveda-Deltell, Elizabeth Pérez-Valenciano, Víctor Manuel Barberá, Javier Gallego-Plazas, Álvaro Rodríguez-Lescure, José Martı́n-Nieto, Miguel Saceda
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11030413

New Phosphorylation Sites of Rad51 by c-Met Modulates Presynaptic Filament Stability
Cited by: 11
Author(s): Thomas Chabot, Alain Defontaine, Damien Marquis, Axelle Renodon-Cornière, Emmanuelle Courtois, Fabrice Fleury, Yvonnick Chéraud
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers13164002

Effect of Pterostilbene, a Natural Derivative of Resveratrol, in the Treatment of Colorectal Cancer through Top1/Tdp1-Mediated DNA Repair Pathway
Cited by: 17
Author(s): Yutian Zhang, Ying Liu, Chengfei Sun, Xiang Chen, Luyao Han, Tingqiang Wang, Jinfeng Liu, Xijing Chen, Di Zhao
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers13133329

Haploinsufficiency Interactions between RALBP1 and p53 in ERBB2 and PyVT Models of Mouse Mammary Carcinogenesis
Cited by: 5
Author(s): Sharda P. Singh, Ji‐Hyun Lee, Chhanda Bose, Hongzhi Li, Yate-Ching Yuan, Ashly Hindle, Sharad S. Singhal, Jonathan Kopel, Philip Palade, Catherine Jones, Rakhshanda Layeequr Rahman, Yogesh C. Awasthi
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers11121883

Targeting FAT1 Inhibits Carcinogenesis, Induces Oxidative Stress and Enhances Cisplatin Sensitivity through Deregulation of LRP5/WNT2/GSS Signaling Axis in Oral Squamous Cell Carcinoma
Cited by: 25
Author(s): Tung Nien Hsu, Chih Ming Huang, Chin Sheng Huang, Maosong Huang, Chi Tai Yeh, Tsu Yi Chao, Oluwaseun Adebayo Bamodu
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers11111815

Nucleocytoplasmic Shuttling of STATs. A Target for Intervention?
Cited by: 11
Author(s): Sabrina Ernst, Gerhard Müller‐Newen
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers13050982

Rabdosianone I, a Bitter Diterpene from an Oriental Herb, Suppresses Thymidylate Synthase Expression by Directly Binding to ANT2 and PHB2
Cited by: 3
Author(s): Motoki Watanabe, Yasumasa Yamada, Yoichi Kurumida, Tomoshi Kameda, Mamiko Sukeno, Mahiro Iizuka-Ohashi, Yoshihiro Sowa, Yosuke Iizumi, Hideki Takakura, Shingo Miyamoto, Michihiro Mutoh
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers12071858

Efficient Therapeutic Delivery by a Novel Cell-Penetrating Peptide Derived from Acinus
Cited by: 4
Author(s): Justine Habault, Clive S. Fraser, Ewa Pasquereau-Kotula, Maëlys Born-Bony, Anne Marie‐Cardine, Jean-Luc Poyet
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers13040927

Novel Small Molecule Hsp90/Cdc37 Interface Inhibitors Indirectly Target K-Ras-Signaling
Cited by: 8
Author(s): Farid Ahmad Siddiqui, Hanna Parkkola, Vladimir R. Vukić, Christina Oetken-Lindholm, Alok Jaiswal, Alexandros Kiriazis, Karolina Pavic, Tero Aittokallio, Tiina A. Salminen, Daniel Abankwa
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers12020466

Venetoclax, a BCL-2 Inhibitor, Enhances the Efficacy of Chemotherapeutic Agents in Wild-Type ABCG2-Overexpression-Mediated MDR Cancer Cells
Cited by: 34
Author(s): Jing-Quan Wang, Jonathan Y. Li, Quincy Teng, Zi‐Ning Lei, Ning Ji, Qingbin Cui, Leli Zeng, Yihang Pan, Dong‐Hua Yang, Zhe‐Sheng Chen
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers11050649

Targeting ATG4 in Cancer Therapy
Cited by: 28
Author(s): Yuanyuan Fu, Zhiying Huang, Hong Liu, Jiahong Lu, Du Feng, Xiao‐Ming Yin, Min Li
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers12092496

Combined Methylome and Transcriptome Analyses Reveals Potential Therapeutic Targets for EGFR Wild Type Lung Cancers with Low PD-L1 Expression
Cited by: 11
Author(s): Wenquan Hu, Guosheng Wang, Lonny Yarmus, Yuan Wan
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.cell.2016.10.046

Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes
Cited by: 171
Author(s): Sichen Shao, J. Murray, Alan Brown, Jack Taunton, V. Ramakrishnan, Ramanujan S. Hegde
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.cell.2013.08.018

Molecular Architecture of the ATP-Dependent Chromatin-Remodeling Complex SWR1
Cited by: 133
Author(s): Vu Q. Nguyen, Anand Ranjan, Florian Stengel, Debbie Wei, Ruedi Aebersold, Carl Wu, Andres E. Leschziner
Software Mentions: 1
Published: almost 13 years ago

10.1016/j.cell.2016.08.074

Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation
Cited by: 121
Author(s): Tanweer Hussain, J.L. Llácer, Brian T. Wimberly, Jeffrey S. Kieft, V. Ramakrishnan
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.cell.2021.02.033

Reduced neutralization of SARS-CoV-2 B.1.1.7 variant by convalescent and vaccine sera
Cited by: 424
Author(s): Piyada Supasa, Daming Zhou, Wanwisa Dejnirattisai, C Liu, Alexander J. Mentzer, H. Ginn, Yuguang Zhao, Duyvesteyn Hme., Rungtiwa Nutalai, Aekkachai Tuekprakhon, Beibei Wang, Guido C. Paesen, J Slon-Campos, César López-Camacho, Bassam Hallis, Naomi Coombes, Kevin R. Bewley, Sue Charlton, T S Walter, Eleanor Barnes, Susanna Dunachie, Donal Skelly, Sheila F Lumley, Natalie Baker, Imam H. Shaik, Holly E. Humphries, Kerry Godwin, Nick Gent, Alex Sienkiewicz, Christina Dold, Robert H. Levin, Tao Dong, Andrew J. Pollard, Julian C. Knight, Paul Klenerman, Derrick W. Crook, Teresa Lambe, Elizabeth A. Clutterbuck, Sagida Bibi, Amy Flaxman, Mustapha Bittaye, Sandra Belij‐Rammerstorfer, Sarah C. Gilbert, ' Hall, Mark A. Williams, Neil G. Paterson, William James, Miles W. Carroll, Elizabeth E. Fry, Juthathip Mongkolsapaya, Jingshan Ren, D.I. Stuart, Gavin Screaton
Software Mentions: 1
Published: over 5 years ago

10.1016/j.cell.2014.05.024

Structure of the Mammalian Ribosome-Sec61 Complex to 3.4 Å Resolution
Cited by: 297
Author(s): R.M. Voorhees, I.S. Fernandez, Sjors H.W. Scheres, Ramanujan S. Hegde
Software Mentions: 1
Published: about 12 years ago

10.1016/j.cell.2020.03.032

The Crystal Structure of a Biological Insulated Transmembrane Molecular Wire
Cited by: 109
Author(s): Marcus J. Edwards, Gaye F. White, Julea N. Butt, David J. Richardson, Thomas A. Clarke
Software Mentions: 1
Published: over 6 years ago

10.1016/j.cell.2020.06.025

Structures of Human Antibodies Bound to SARS-CoV-2 Spike Reveal Common Epitopes and Recurrent Features of Antibodies
Cited by: 677
Author(s): Christopher O. Barnes, Anthony P. West, Kathryn E. Huey-Tubman, Magnus A.G. Hoffmann, Naima G. Sharaf, Pauline R. Hoffman, Nicholas Koranda, Harry B. Gristick, Christian Gaebler, Frauke Muecksch, Julio C. C. Lorenzi, Shlomo Finkin, Thomas Hägglöf, Arlene Hurley, Katrina G. Millard, Yiska Weisblum, Fabian Schmidt, Théodora Hatziioannou, Paul D. Bieniasz, Marina Caskey, Davide F. Robbiani, Michel C. Nussenzweig, Pamela J. Björkman
Software Mentions: 1
Published: about 6 years ago

10.1016/j.cell.2017.09.008

Structural Basis for a Safety-Belt Mechanism That Anchors Condensin to Chromosomes
Cited by: 135
Author(s): Marc Kschonsak, Fabian Merkel, S. Bisht, J Metz, Vladimir Rybin, Markus Hassler, Christian H. Haering
Software Mentions: 1
Published: almost 9 years ago

10.1016/j.cell.2019.01.046

Induction of Potent Neutralizing Antibody Responses by a Designed Protein Nanoparticle Vaccine for Respiratory Syncytial Virus
Cited by: 307
Author(s): Jessica Marcandalli, Brooke Fiala, Sebastian Ols, Michela Perotti, Willem de van der Schueren, Joost Snijder, Edgar A. Hodge, Mark A. Benhaim, Rashmi Ravichandran, Lauren Carter, Will Sheffler, Livia Brunner, Maria Lawrenz, Patrice Dubois, Antonio Lanzavecchia, Federica Sallusto, Kelly K. Lee, David Veesler, Colin Correnti, Lance Stewart, David Baker, Karin Loré, Laurent Perez, Neil P. King
Software Mentions: 1
Published: over 7 years ago

10.1016/j.cell.2012.07.022

Lis1 Acts as a “Clutch” between the ATPase and Microtubule-Binding Domains of the Dynein Motor
Cited by: 205
Author(s): Jinxiu Huang, A. J. Roberts, Andres E. Leschziner, Samara L. Reck-Peterson
Software Mentions: 1
Published: about 14 years ago