pypi: PyMOL | Projects | Ecosyste.ms: Papers

10.1038/s41598-020-57593-8

Functional mechanism and pathogenic potential of MYRF ICA domain mutations implicated in birth defects
Cited by: 10
Author(s): Hongjoo An, Chuandong Fan, Mohamed Sharif, Dongkyeong Kim, Yannick Poitelon, Yungki Park
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-57658-8

Screening of natural compounds that targets glutamate racemase of Mycobacterium tuberculosis reveals the anti-tubercular potential of flavonoids
Cited by: 27
Author(s): Alka Pawar, Prakash Jha, Madhu Chopra, Uma Chaudhry, Daman Saluja
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-58371-2

Supramolecular tholos-like architecture constituted by archaeal proteins without functional annotation
Cited by: 8
Author(s): Maho Yagi-Utsumi, Arunima Sikdar, Chihong Song, Jimin Park, Rintaro Inoue, Hiroki Watanabe, Raymond N. Burton‐Smith, Toshiya Kozai, Tatsuya Suzuki, Atsuji Kodama, Kentaro Ishii, Hirokazu Yagi, Tadashi Satoh, Susumu Uchiyama, Takayuki Uchihashi, Keehyoung Joo, Jooyoung Lee, Masaaki Sugiyama, Kazuyoshi Murata, Koichi Kato
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-58845-3

Exome sequencing revealed DNA variants in NCOR1, IGF2BP1, SGLT2 and NEK11 as potential novel causes of ketotic hypoglycemia in children
Cited by: 6
Author(s): Yazeid Alhaidan, Martin Jakob Larsen, Anders Schou, Maria Halldin Stenlid, Mohammed Al Balwi, Henrik Thybo Christesen, Klaus Brusgaard
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-58873-z

Identification and characterization of a bacterial core methionine synthase
Cited by: 5
Author(s): Darja Deobald, Rafael Hanna, Shahab Shahryari, Gunhild Layer, Lorenz Adrian
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-59455-9

An ENU-induced mutation in Twist1 transactivation domain causes hindlimb polydactyly with complete penetrance and dominant-negatively impairs E2A-dependent transcription
Cited by: 4
Author(s): Runze Chen, Xuebo Cheng, Yuexi Tan, Tien‐Chien Chang, Hailong Lv, Yichang Jia
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-59460-y

Novel and selective inactivators of Triosephosphate isomerase with anti-trematode activity
Cited by: 11
Author(s): Florencia Ferraro, Ileana Corvo, Lucia Bergalli, Andrea Ilarraz, Mauricio Cabrera, J. Gil, Brian M. Susuki, Conor R. Caffrey, David J. Timson, Xavier Robert, Christophe Guillon, Teresa Freire, Guzmán Álvarez
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-59571-6

Structure of the agonist 12–HHT in its BLT2 receptor-bound state
Cited by: 8
Author(s): Fabrice Giusti, Marina Casiraghi, Élodie Point, Marjorie Damian, Jutta Rieger, Christel Le Bon, Alexandre Pozza, Karine Moncoq, Jean-Louis Banères, Laurent J. Catoire
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60060-z

Antifreeze protein complements cryoprotective dehydration in the freeze-avoiding springtail Megaphorura arctica
Cited by: 14
Author(s): Laurie A. Graham, Marie E Boddington, Martin Holmstrup, Peter L. Davies
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60263-4

Effects of SDS on the activity and conformation of protein tyrosine phosphatase from thermus thermophilus HB27
Cited by: 13
Author(s): Hai Hou, Huawei He, Yejing Wang
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60319-5

Development of the clinical candidate PBD-C06, a humanized pGlu3-Aβ-specific antibody against Alzheimer’s disease with reduced complement activation
Cited by: 15
Author(s): Thore Hettmann, Stephen D. Gillies, Martin Kleinschmidt, Anke Piechotta, Koki Makioka, Cynthia A. Lemere, Stephan Schilling, Jens‐Ulrich Rahfeld, Inge Lues
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60425-4

Natural selection supports escape from concerted evolution of a recently duplicated CEACAM1 paralog in the ruminant CEA gene family
Cited by: 1
Author(s): Jana Hänske, Tim Hammacher, Franziska Grenkowitz, Martin Mansfeld, Tung Huy Dau, Pavlo Maksimov, Chr. Friedrich, Wolfgang Zimmermann, Robert Kammerer
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-59925-0

Combined cardio-protective ability of syringic acid and resveratrol against isoproterenol induced cardio-toxicity in rats via attenuating NF-kB and TNF-α pathways
Cited by: 42
Author(s): S Manjunatha, Althaf Hussain Shaik, Elke Prasad, Suliman Yousef Alomar, Altaf Mohammad, Lakshmi Devi Kodidhela
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60824-7

Modification of an Anopheles gambiae odorant binding protein to create an array of chemical sensors for detection of drugs
Cited by: 18
Author(s): Khasim Cali, Krishna Persaud
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60332-8

Structure and mechanism of a redesigned multidrug transporter from the Major Facilitator Superfamily
Cited by: 9
Author(s): Heng Wu, J. Symerský, Min Lu
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60953-z

Human glutaredoxin-1 can transfer copper to isolated metal binding domains of the P1B-type ATPase, ATP7B
Cited by: 8
Author(s): Shadi Maghool, Sharon La Fontaine, Blaine R. Roberts, Ann H. Kwan, M.J. Maher
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60954-y

Cellular metabolic activity marker via selective turn-ON detection of transporter protein using nitrobenzoxadiazole-based fluorescent reporter
Cited by: 12
Author(s): Tanoy Dutta, Kaushik Pal, Apurba Lal Koner
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61107-x

Selective Binding of HSC70 and its Co-Chaperones to Structural Hotspots on CFTR
Cited by: 21
Author(s): Imad Baaklini, Conrado de Campos Gonçalves, Gergely L. Lukacs, Jason C. Young
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61182-0

Silicon amendment induces synergistic plant defense mechanism against pink stem borer (Sesamia inferens Walker.) in finger millet (Eleusine coracana Gaertn.)
Cited by: 30
Author(s): Kundansing Rajpalsing Jadhao, Anuradha Bansal, Gyana Ranjan Rout
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61334-2

Expression and distribution of CD151 as a partner of alpha6 integrin in male germ cells
Cited by: 9
Author(s): Jana Jankovičová, Michaela Frolíková, Veronika Páleníková, Eliška Valášková, Jiří Černý, Petra Sečová, Michaela Bartóková, Ľubica Horovská, Pavla Maňásková-Postlerová, Jana Antalíková, Kateřina Komrsková
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61433-0

T-Cell Receptor Variable β Domains Rigidify During Affinity Maturation
Cited by: 18
Author(s): Monica L. Fernández‐Quintero, Clarissa A. Seidler, Klaus R. Liedl
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61529-7

Seeking high-priority mutations enabling successful antibody-breeding: systematic analysis of a mutant that gained over 100-fold enhanced affinity
Cited by: 9
Author(s): Hiroyuki Oyama, Yuki Kiguchi, Izumi Morita, Chika Yamamoto, Yuka Higashi, Miku Taguchi, Tatsuya Tagawa, Yuri Enami, Yuriko Takamine, Hirotsugu Hasegawa, Atsuko Takeuchi, N. Kobayashi
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61697-6

Identifying mutation hotspots reveals pathogenetic mechanisms of KCNQ2 epileptic encephalopathy
Cited by: 37
Author(s): Jiaren Zhang, Eung Chang Kim, Congcong Chen, Erik Procko, Shashank Pant, Kei Fong Lam, Jaimin Patel, Rebecca Choi, Mary Hong, Dhruv Joshi, Eric Bolton, Emad Tajkhorshid, Hee Jung Chung
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61677-w

Modulation of glycine receptor single-channel conductance by intracellular phosphorylation
Cited by: 13
Author(s): Gustavo Moraga-Cid, Victoria P. San Martín, César O. Lara, Braulio Muñoz, Ana M. Marileo, Anggelo Sazo, Carola Muñoz-Montesino, Jorge Fuentealba, Patricio Castro, Leonardo Guzmán, Carlos F. Burgos, Hanns Ulrich Zeilhofer, Luis G. Aguayo, Pierre‐Jean Corringer, Gonzalo E. Yévenes
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-62332-0

Cellular processes involved in lung cancer cells exposed to direct current electric field
Cited by: 1
Author(s): Huijuan Li, Shibin Liu, Xue Yang, Yongqian Du, Jiayi Luo, Jie Tan, Yu Sun
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-62427-8

Crystal structure of pathogenic Staphylococcus aureus lipase complex with the anti-obesity drug orlistat
Cited by: 15
Author(s): Kengo Kitadokoro, M. Tanaka, Takaaki Hikima, Yukiko Okuno, Masaki Yamamoto, Shigeki Kamitani
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-62423-y

Inhibition of the activity of HIV-1 protease through antibody binding and mutations probed by molecular dynamics simulations
Cited by: 13
Author(s): Apoorva Badaya, Yellamraju U. Sasidhar
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-62833-y

Dynamic plasticity of the lipid antigen-binding site of CD1d is crucially favoured by acidic pH and helper proteins
Cited by: 3
Author(s): Bruno Cuevas-Zuviría, Marina Mínguez-Toral, Araceli Díaz‐Perales, María Garrido‐Arandia, Luis F. Pacios
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-62606-7

Structure-based engineering of anti-GFP nanobody tandems as ultra-high-affinity reagents for purification
Cited by: 26
Author(s): Ziyue Zhang, Yao Wang, Yu Ding, Motoyuki Hattori
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-64115-z

Crystal structure of Type IX secretion system PorE C-terminal domain from Porphyromonas gingivalis in complex with a peptidoglycan fragment
Cited by: 11
Author(s): Nhung Thi Trang Trinh, Hieu Quang Tran, Quyen Van Dong, Christian Cambillau, Alain Roussel, Philippe Leone
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-64258-z

The mechanism of loop C-neonicotinoid interactions at insect nicotinic acetylcholine receptor α1 subunit predicts resistance emergence in pests
Cited by: 9
Author(s): Shinichi Shimada, M. Kamiya, Sho Shigetou, Kakeru Tomiyama, Yuma Komori, Leo Magara, Makoto Ihara, Kazuhiko Matsuda
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-64860-1

Aggregation of M3 (E376D) variant of alpha1- antitrypsin
Cited by: 2
Author(s): Aadil Bashir, Younis Hazari, Debnath Pal, Dibyajyoti Maity, Samirul Bashir, Laishram Rajendrakumar Singh, Naveed Nazir Shah, Khalid Majid Fazili
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-65104-y

Establishment of an in vitro RNA polymerase transcription system: a new tool to study transcriptional activation in Borrelia burgdorferi
Cited by: 6
Author(s): William K. Boyle, Laura S. Hall, Anthony A. Armstrong, Daniel P. Dulebohn, D. Scott Samuels, Frank C. Gherardini, Travis J. Bourret
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-65935-9

Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici
Cited by: 5
Author(s): Cancan Yang, Jing Li, Zhuochun Huang, Xuefa Zhang, Xiaolei Gao, Chunyuang Zhu, Paul F. Morris, Xiuguo Zhang
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-66164-w

Physicochemical-guided design of cathelicidin-derived peptides generates membrane active variants with therapeutic potential
Cited by: 13
Author(s): Nelson Gomes Junior de Oliveira, Marlon Henrique Cardoso, Nadya Velikova, Marcel Giesbers, Jerry M. Wells, Taia Maria Berto Rezende, Renko de Vries, Octávio Luiz Franco
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-67002-9

Albumin-neprilysin fusion protein: understanding stability using small angle X-ray scattering and molecular dynamic simulations
Cited by: 8
Author(s): Alina Kulakova, Sowmya Indrakumar, Pernille Sønderby Tuelung, Sujata Mahapatra, Werner Streicher, Günther H.J. Peters, Pernille Harris
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-66596-4

Adeno-associated virus-binding antibodies detected in cats living in the Northeastern United States lack neutralizing activity
Cited by: 6
Author(s): Kei Adachi, Gregory A. Dissen, Alejandro Lomniczi, Qing Xie, Sergio Ojeda, Hiroyuki Nakai
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-66961-3

Synergistic stabilization by nitrosoglutathione-induced thiol modifications in the stromal interaction molecule-2 luminal domain suppresses basal and store operated calcium entry
Cited by: 4
Author(s): Matthew J. Novello, Jinhui Zhu, MengQi Zhang, Qingping Feng, Peter B. Stathopulos
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-66936-4

A novel loss-of-function mutation of PBK associated with human kidney stone disease
Cited by: 3
Author(s): Choochai Nettuwakul, Nunghathai Sawasdee, Oranud Praditsap, Nanyawan Rungroj, Arnat Pasena, Thanyaporn Dechtawewat, Nipaporn Deejai, Suchai Sritippayawan, Santi Rojsatapong, Wipada Chaowagul, Pa‐thai Yenchitsomanus
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-65648-z

Rosmarinic Acid Exhibits Anticancer Effects via MARK4 Inhibition
Cited by: 102
Author(s): Saleha Anwar, Anas Shamsi, Mohd Shahbaaz, Aarfa Queen, Parvez Khan, Gulam Mustafa Hasan, Asimul Islam, Mohamed F. Alajmi, Afzal Hussain, Faizan Ahmad, Md. Imtaiyaz Hassan
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-67749-1

A candidate multi-epitope vaccine against SARS-CoV-2
Cited by: 184
Author(s): Tamalika Kar, Utkarsh Narsaria, Srijita Basak, Debashrito Deb, Filippo Castiglione, David M. Mueller, Anurag P. Srivastava
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-67415-6

Identification of the amino acid position controlling the different enzymatic activities in walnut tyrosinase isoenzymes (jrPPO1 and jrPPO2)
Cited by: 11
Author(s): Felix Panis, Annette Rompel
Software Mentions: 1
Published: about 6 years ago

10.1016/j.str.2020.05.010

Structural Basis for the Activation and Target Site Specificity of CDC7 Kinase
Cited by: 12
Author(s): Samual D. Dick, Stefania Federico, Simon Hughes, V.E. Pye, Nicola O’Reilly, Peter Cherepanov
Software Mentions: 1
Published: about 6 years ago

10.1016/j.str.2020.11.004

Dimeric Structure of the Pseudokinase IRAK3 Suggests an Allosteric Mechanism for Negative Regulation
Cited by: 18
Author(s): Sven M. Lange, Marina I. Nelen, Philip Cohen, Yogesh Kulathu
Software Mentions: 1
Published: over 5 years ago

10.1186/1742-4682-10-15

Molecular docking between the RNA polymerase of the Moniliophthora perniciosa mitochondrial plasmid and Rifampicin produces a highly stable complex
Cited by: 2
Author(s): Bruno Silva Andrade, Catiane S. Souza, Aristóteles Góes-Neto
Software Mentions: 1
Published: over 13 years ago

10.1186/1742-4682-10-25

Structural mimicry between SLA/LP and Rickettsia surface antigens as a driver of autoimmune hepatitis: insights from an in silico study
Cited by: 10
Author(s): Alessandro Paiardini, Stefano Pascarella
Software Mentions: 1
Published: over 13 years ago

10.1186/1742-4682-10-46

Identification of novel modulators for ionotropic glutamate receptor, iGluA2 by in-silico screening
Cited by: 4
Author(s): Balasundaram Padmanabhan
Software Mentions: 1
Published: about 13 years ago

10.7150/thno.35919

Dengue and Zika Virus Domain III-Flagellin Fusion and Glycan-Masking E Antigen for Prime-Boost Immunization
Cited by: 13
Author(s): Hsiao‐Han Lin, Shao-Ping Yang, Meng‐Ju Tsai, Guan-Cheng Lin, Han‐Chung Wu, Suh-Chin Wu
Software Mentions: 1
Published: over 7 years ago

10.7150/thno.35210

Water-Soluble Phthalocyanines Selectively Bind to Albumin Dimers: A Green Approach Toward Enhancing Tumor-Targeted Photodynamic Therapy
Cited by: 29
Author(s): Xingshu Li, Ki‐Hun Jeong, Yoonji Lee, Tian Guo, Da-Young Lee, Jeong-Min Park, Nahyun Kwon, Jung-Hyun Na, Suc-Kyoung Hong, Sun Shin, Jian Huang, Sun Choi, Se-Hoon Kim, Juyoung Yoon
Software Mentions: 1
Published: over 7 years ago

10.7150/thno.53330

Lipin 1 deficiency causes adult-onset myasthenia with motor neuron dysfunction in humans and neuromuscular junction defects in zebrafish
Cited by: 8
Author(s): Shuxian Lu, Zhaojie Lyu, Wenwen Wang, Yao Kou, Cong Liu, Shengyue Li, Mengyan Hu, Hongjie Zhu, Wenxing Wang, Ce Zhang, Yi‐Chun Kuan, Yiwen Liu, Jianming Chen, Jing Tian
Software Mentions: 1
Published: over 5 years ago

10.7150/thno.53572

Mutation of SPINOPHILIN (PPP1R9B) found in human tumors promotes the tumorigenic and stemness properties of cells
Cited by: 3
Author(s): Eva M. Verdugo‐Sivianes, Ana M. Rojas, Sandra Muñoz-Galván, Daniel Otero-Albiol, Amancio Carnero
Software Mentions: 1
Published: over 5 years ago

10.7150/thno.54245

Pancreatic ductal deletion of S100A9 alleviates acute pancreatitis by targeting VNN1-mediated ROS release to inhibit NLRP3 activation
Cited by: 12
Author(s): Hong Xiang, Fengjin Guo, Xufeng Tao, Qi Zhou, Shilin Xia, Dawei Deng, Lunxu Li, Dong Shang
Software Mentions: 1
Published: over 5 years ago

10.7150/thno.58739

N-terminus-independent activation of c-Src via binding to a tetraspan(in) TM4SF5 in hepatocellular carcinoma is abolished by the TM4SF5 C-terminal peptide application
Cited by: 5
Author(s): Haeng Eun Song, Yoonji Lee, Eun‐Mi Kim, Chang Yun Cho, Oisun Jung, Doo‐Hyung Lee, Eun Goo Lee, Seo Hee Nam, Min‐Kyung Kang, Stephani Joy Y. Macalino, Ji Eon Kim, Jae Woo Jung, Sung Won Kwon, Sun Choi, Sang Eun Lee
Software Mentions: 1
Published: over 5 years ago

10.1186/1477-9560-11-2

Purification and characterization of mutant miniPlasmin for thrombolytic therapy
Cited by: 4
Author(s): Xiangyang Lin, Yan Wang, Yongfeng Zhang, Bing Ren Huang, James J Lin, Scott J Hallock, Hong Yu, Hongwei Shao, Jing Yan, Bo Huang, Xuejun C. Zhang, Wei Cao, Xueming Xu, Xinli Lin
Software Mentions: 1
Published: over 13 years ago

10.3390/toxins2112699

Ribosome-Inactivating Proteins: From Plant Defense to Tumor Attack
Cited by: 132
Author(s): Maddalena de Virgilio, Alessio Lombardi, Rocco Caliandro, Maria Serena Fabbrini
Software Mentions: 1
Published: almost 16 years ago

10.3390/toxins6051526

Ophiophagus hannah Venom: Proteome, Components Bound by Naja kaouthia Antivenin and Neutralization by N. kaouthia Neurotoxin-Specific Human ScFv
Cited by: 19
Author(s): Witchuda Danpaiboon, Onrapak Reamtong, Nitat Sookrung, Watee Seesuay, Yuwaporn Sakolvaree, Jeeraphong Thanongsaksrikul, Fonthip Dong-din-on, Potjanee Srimanote, Kanyarat Thueng-in, Wanpen Chaicumpa
Software Mentions: 1
Published: over 12 years ago

10.3390/toxins7020407

Mutagenesis and Functional Analysis of the Pore-Forming Toxin HALT-1 from Hydra magnipapillata
Cited by: 15
Author(s): Yvonne Jing Mei Liew, Wai Tuck Soh, William F. Jiemy, Jung Shan Hwang
Software Mentions: 1
Published: over 11 years ago

10.3390/toxins7051467

Do the A Subunits Contribute to the Differences in the Toxicity of Shiga Toxin 1 and Shiga Toxin 2?
Cited by: 21
Author(s): Debaleena Basu, Nilgun E. Tumer
Software Mentions: 1
Published: over 11 years ago

10.3390/toxins7062221

Proteasome as a Molecular Target of Microcystin-LR
Cited by: 7
Author(s): Zhu Zhu, Lili Zhang, Guoqing Shi
Software Mentions: 1
Published: about 11 years ago

10.3390/toxins7083344

Signaling beyond Punching Holes: Modulation of Cellular Responses by Vibrio cholerae Cytolysin
Cited by: 20
Author(s): Barkha Khilwani, Kausik Chattopadhyay
Software Mentions: 1
Published: almost 11 years ago

10.3390/toxins8040099

Structural Characterization of Humanized Nanobodies with Neutralizing Activity against the Bordetella pertussis CyaA-Hemolysin: Implications for a Potential Epitope of Toxin-Protective Antigen
Cited by: 13
Author(s): Aijaz Ahmad Malik, Chompounoot Imtong, Nitat Sookrung, Gerd Katzenmeier, Wanpen Chaicumpa, Chanan Angsuthanasombat
Software Mentions: 1
Published: over 10 years ago

10.3390/toxins8070222

Mapping Protein–Protein Interactions of the Resistance-Related Bacterial Zeta Toxin–Epsilon Antitoxin Complex (ε2ζ2) with High Affinity Peptide Ligands Using Fluorescence Polarization
Cited by: 11
Author(s): María Isabel Fernández‐Bachiller, Iwona Brzozowska, Norbert Odolczyk, Urszula Zielenkiewicz, Piotr Zielenkiewicz, Jörg Rademann
Software Mentions: 1
Published: about 10 years ago

10.3390/toxins8090261

Beyond Ribosomal Binding: The Increased Polarity and Aberrant Molecular Interactions of 3-epi-deoxynivalenol
Cited by: 15
Author(s): Yousef I. Hassan, Honghui Zhu, Yan Zhu, Ting Zhou
Software Mentions: 1
Published: almost 10 years ago

10.3390/toxins8090267

Bioactivation and Regioselectivity of Pig Cytochrome P450 3A29 towards Aflatoxin B1
Cited by: 17
Author(s): Jun Wu, Ruohong Chen, Caihui Zhang, Kangbai Li, Weiying Xu, Limin Wang, Qingmei Chen, Peiqiang Mu, Jun Jiang, Jikai Wen, Yiqun Deng
Software Mentions: 1
Published: almost 10 years ago

10.3390/toxins8100296

Crystal Structure of Ribosome-Inactivating Protein Ricin A Chain in Complex with the C-Terminal Peptide of the Ribosomal Stalk Protein P2
Cited by: 25
Author(s): Weiwei Shi, Yuchen Tang, S.F. Sze, Zhen-Ning Zhu, Kam‐Bo Wong, Pang‐Chui Shaw
Software Mentions: 1
Published: almost 10 years ago

10.3390/toxins9020071

Fungal Ribotoxins: A Review of Potential Biotechnological Applications
Cited by: 58
Author(s): Miriam Olombrada, Rodrigo Lázaro‐Gorines, Juan Carlos López-Rodríguez, Álvaro Martínez‐del‐Pozo, Mercedes Oñaderra, Moisés Maestro-López, Javier Lacadena, José G. Gavilanes, Lucı́a Garcı́a-Ortega
Software Mentions: 1
Published: over 9 years ago

10.3390/toxins9030093

Crystal Structure of the Receptor-Binding Domain of Botulinum Neurotoxin Type HA, Also Known as Type FA or H
Cited by: 23
Author(s): Guorui Yao, Kwok Ho Lam, Kay Perry, Jasmin Weisemann, Andreas Rummel, Rongsheng Jin
Software Mentions: 1
Published: over 9 years ago

10.3390/toxins9040133

Differences in Ribosome Binding and Sarcin/Ricin Loop Depurination by Shiga and Ricin Holotoxins
Cited by: 17
Author(s): Xiaoping Li, Nilgun E. Tumer
Software Mentions: 1
Published: over 9 years ago

10.3390/toxins9090259

Heterologous Expression, Purification and Immunoreactivity of the Antigen 5 from Polybia paulista Wasp Venom
Cited by: 19
Author(s): Murilo Luiz Bazon, Amilcar Pérez-Riverol, José Roberto Aparecido dos Santos-Pinto, Luís Gustavo Romani Fernandes, Alexis Musacchio Lasa, Débora Laís Justo-Jacomini, Mário Sérgio Palma, Ricardo de Lima Zollner, Márcia Regina Brochetto-Braga
Software Mentions: 1
Published: almost 9 years ago

10.3390/toxins9090289

Block V RTX Domain of Adenylate Cyclase from Bordetella pertussis: A Conformationally Dynamic Scaffold for Protein Engineering Applications
Cited by: 8
Author(s): Beyza Bulutoglu, Scott Banta
Software Mentions: 1
Published: almost 9 years ago

10.3390/toxins9120378

A Supercluster of Neutralizing Epitopes at the Interface of Ricin’s Enzymatic (RTA) and Binding (RTB) Subunits
Cited by: 7
Author(s): Amanda Y. Poon, David J. Vance, Yinghui Rong, Dylan Ehrbar, Nicholas J. Mantis
Software Mentions: 1
Published: over 8 years ago

10.3390/toxins9120387

Investigation of Binding Modes and Functional Surface of Scorpion Toxins ANEP to Sodium Channels 1.7
Cited by: 10
Author(s): Yongbo Song, Liu Z, Q Zhang, Li C, Wei Jin, Lei Liu, J Zhang
Software Mentions: 1
Published: over 8 years ago

10.3390/toxins10040153

Crystal Structure of Botulinum Neurotoxin A2 in Complex with the Human Protein Receptor SV2C Reveals Plasticity in Receptor Binding
Cited by: 14
Author(s): Robert Gustafsson, Sicai Zhang, Geoffrey Masuyer, Min Dong, Pål Stenmark
Software Mentions: 1
Published: over 8 years ago

10.3390/toxins10060238

A Novel ShK-Like Toxic Peptide from the Transcriptome of the Cnidarian Palythoa caribaeorum Displays Neuroprotection and Cardioprotection in Zebrafish
Cited by: 13
Author(s): Qiwen Liao, Guiyi Gong, Shirley W. I. Siu, Chi‐Ming Wong, Huidong Yu, Yu Chung Tse, Gandhi Rádis‐Baptista, Simon Ming‐Yuen Lee
Software Mentions: 1
Published: about 8 years ago

10.3390/toxins10090358

Engineering Gain-of-Function Analogues of the Spider Venom Peptide HNTX-I, A Potent Blocker of the hNaV1.7 Sodium Channel
Cited by: 9
Author(s): Yunxiao Zhang, Qiuchu Yang, Qingfeng Zhang, Dezheng Peng, Minzhi Chen, Songping Liang, Xi Zhou, Liu Z
Software Mentions: 1
Published: almost 8 years ago

10.3390/toxins10100389

Molecular Modeling Studies on the Interactions of Aflatoxin B1 and Its Metabolites with Human Acetylcholinesterase. Part II: Interactions with the Catalytic Anionic Site (CAS)
Cited by: 5
Author(s): Joyce S. F. D. de Almeida, Rafael Doležal, Ondřej Krejcar, Kamil Kuča, Kamil Musílek, Daniel Jun, Tanos C. C. França
Software Mentions: 1
Published: almost 8 years ago

10.3390/toxins10110452

Innovative Immunization Strategies for Antivenom Development
Cited by: 52
Author(s): Erick Bermúdez-Méndez, Albert Fuglsang-Madsen, Sofie Føns, Bruno Lomonte, José Marı́a Gutiérrez, Andreas Hougaard Laustsen
Software Mentions: 1
Published: almost 8 years ago

10.3390/toxins10120507

The Modes of Action of MARTX Toxin Effector Domains
Cited by: 22
Author(s): Byoung Sik Kim
Software Mentions: 1
Published: over 7 years ago

10.3390/toxins11030158

Multiple CH/π Interactions Maintain the Binding of Aflatoxin B1 in the Active Cavity of Human Cytochrome P450 1A2
Cited by: 8
Author(s): Jun Wu, Si-Si Zhu, Yunbo Wu, Tianqing Jiang, Lingling Wang, Jun Jiang, Jikai Wen, Yiqun Deng
Software Mentions: 1
Published: over 7 years ago

10.3390/toxins11040231

CesH Represses Cereulide Synthesis as an Alpha/Beta Fold Hydrolase in Bacillus cereus
Cited by: 6
Author(s): Shen Tian, Hairong Xiong, Peiling Geng, Zhiming Yuan, Xiaomin Hu
Software Mentions: 1
Published: over 7 years ago

10.3390/toxins11060324

Ricin: An Ancient Story for a Timeless Plant Toxin
Cited by: 90
Author(s): Letizia Polito, Massimo Bortolotti, Maria Giulia Battelli, Giulia Calafato, Andrea Bolognesi
Software Mentions: 1
Published: about 7 years ago

10.3390/toxins11060355

Brown Spider (Loxosceles) Venom Toxins as Potential Biotools for the Development of Novel Therapeutics
Cited by: 22
Author(s): Daniele Chaves-Moreira, Fernando Hitomi Matsubara, Zelinda Schemczssen-Graeff, Elidiana de Bona, Vanessa Ribeiro Heidemann, Clara Guerra-Duarte, Luiza Helena Gremski, Carlos Chávez-Olórtegui, Andrea Senff‐Ribeiro, Olga Meiri Chaim, R.K. Arni, Sílvio Sanches Veiga
Software Mentions: 1
Published: about 7 years ago

10.3390/toxins11090484

Evaluation of the Spider (Phlogiellus genus) Phlotoxin 1 and Synthetic Variants as Antinociceptive Drug Candidates
Cited by: 11
Author(s): Tânia C. Gonçalves, Pierre Lesport, Sarah Kuylle, E.A. Stura, Justyna Ciolek, Gilles Mourier, Denis Servent, Emmanuel Bourinet, Évelyne Benoit, Nicolas Gilles
Software Mentions: 1
Published: almost 7 years ago

10.3390/toxins11090545

Inhibition of Pore-Forming Proteins
Cited by: 16
Author(s): Neža Omersa, Marjetka Podobnik, Gregor Anderluh
Software Mentions: 1
Published: almost 7 years ago

10.3390/toxins11100568

Identification of a Killer Toxin from Wickerhamomyces anomalus with β-Glucanase Activity
Cited by: 12
Author(s): Valentina Cecarini, Massimiliano Cuccioloni, Laura Bonfili, Massimo Ricciutelli, Matteo Valzano, Alessia Cappelli, Consuelo Amantini, Guido Favia, Anna Maria Eleuteri, Mauro Angeletti, Irene Ricci
Software Mentions: 1
Published: almost 7 years ago

10.3390/toxins11110672

Cloning and Immunosuppressive Properties of an Acyl-Activating Enzyme from the Venom Apparatus of Tetrastichus brontispae (Hymenoptera: Eulophidae)
Cited by: 7
Author(s): Xiaomei Zhang, Hua-Jian Zhang, Min Liu, Bin Liu, Xia-Fang Zhang, Chunsheng Ma, Tingting Fu, Youming Hou
Software Mentions: 1
Published: over 6 years ago

10.3390/toxins12010037

Comprehensive Evaluation of the Efficiency of Yeast Cell Wall Extract to Adsorb Ochratoxin A and Mitigate Accumulation of the Toxin in Broiler Chickens
Cited by: 16
Author(s): Suvi Vartiainen, Alexandros Yiannikouris, Juha Apajalahti, C. A. Moran
Software Mentions: 1
Published: over 6 years ago

10.3390/toxins12010019

Looking for the X Factor in Bacterial Pathogenesis: Association of orfX-p47 Gene Clusters with Toxin Genes in Clostridial and Non-Clostridial Bacterial Species
Cited by: 5
Author(s): Maria B. Nowakowska, François P. Douillard, Miia Lindström
Software Mentions: 1
Published: over 6 years ago

10.3390/toxins12030175

Cysteine-Rich Secretory Proteins (CRISPs) from Venomous Snakes: An Overview of the Functional Diversity in a Large and Underappreciated Superfamily
Cited by: 44
Author(s): Takashi Tadokoro, Cassandra M. Modahl, Katsumi Maenaka, Narumi Aoki-Shioi
Software Mentions: 1
Published: over 6 years ago

10.3390/toxins12060397

Crystal Structure of Exotoxin A from Aeromonas Pathogenic Species
Cited by: 2
Author(s): Geoffrey Masuyer
Software Mentions: 1
Published: about 6 years ago

10.3390/toxins12070450

Vaccination with VLPs Presenting a Linear Neutralizing Domain of S. aureus Hla Elicits Protective Immunity
Cited by: 4
Author(s): Jason A. Joyner, Seth M. Daly, Julianne Peabody, Kathleen D. Triplett, Srijana Pokhrel, Bradley O. Elmore, Diane Adebanjo, David S. Peabody, Bryce Chackerian, Pamela R. Hall
Software Mentions: 1
Published: about 6 years ago

10.3390/toxins12090603

Structural and Biochemical Characterization of Botulinum Neurotoxin Subtype B2 Binding to Its Receptors
Cited by: 5
Author(s): Jonathan Davies, Geoffrey Masuyer, Pål Stenmark
Software Mentions: 1
Published: almost 6 years ago

10.3390/toxins12090593

Structural Modeling of Cell Wall Peptidase CwpFM (EntFM) Reveals Distinct Intrinsically Disordered Extensions Specific to Pathogenic Bacillus cereus Strains
Cited by: 7
Author(s): Seav-Ly Tran, Delphine Cormontagne, Jasmina Vidić, Gwenaëlle André, Nalini Ramarao
Software Mentions: 1
Published: almost 6 years ago

10.3390/toxins13080508

Evaluation of Anti-PT Antibody Response after Pertussis Vaccination and Infection: The Importance of Both Quantity and Quality
Cited by: 8
Author(s): Alex‐Mikael Barkoff, Aapo Knuutila, Jussi Mertsola, Qiushui He
Software Mentions: 1
Published: about 5 years ago

10.1016/j.tibs.2008.07.006

The CCN family of proteins: structure–function relationships
Cited by: 358
Author(s): Kenneth P. Holbourn, K. Ravi Acharya, Bernard Perbal
Software Mentions: 1
Published: almost 18 years ago

10.1016/j.tim.2016.07.001

Driving Apart and Segregating Genomes in Archaea
Cited by: 25
Author(s): Daniela Barillà
Software Mentions: 1
Published: over 9 years ago

10.1186/s40794-021-00147-1

Immunoinformatics approach for multi-epitope vaccine design against structural proteins and ORF1a polyprotein of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2)
Cited by: 14
Author(s): Khalid Mohamed Adam
Software Mentions: 1
Published: about 5 years ago

10.3390/tropicalmed3020063

Outer Membrane Protein A Conservation among Orientia tsutsugamushi Isolates Suggests Its Potential as a Protective Antigen and Diagnostic Target
Cited by: 5
Author(s): Sean M. Evans, Haley E. Adcox, Lauren VieBrock, Ryan S. Green, Alison Luce-Fedrow, Suschsmita Chattopadhyay, Ju Jiang, Richard T. Marconi, Daniel Paris, Allen L. Richards, Jason A. Carlyon
Software Mentions: 1
Published: about 8 years ago

10.3390/tropicalmed5040179

In Silico Structural and Functional Characterization of HtrA Proteins of Leptospira spp.: Possible Implications in Pathogenesis
Cited by: 2
Author(s): Brenda B. Daroz, Luis G. V. Fernandes, Aline F. Teixeira, Ana L. T. O. Nascimento
Software Mentions: 1
Published: over 5 years ago

10.3906/biy-2002-20

Model prediction of a Kunitz-type trypsin inhibitor protein from seeds of Acacianilotica L. with strong antimicrobial and insecticidal activity
Cited by: 8
Author(s): Sohaib Mehmood, Muhammad Imran, Asghar Ali, Aisha Munawar, Binish Khaliq, Farzeen Anwar, Qamar Saeed, Friedrich Buck, Saber M. Hussain, Ahsan Saeed, Muhammad Ashraf, Ahmed Akrem
Software Mentions: 1
Published: almost 6 years ago

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Papers Mentioning PyMOL 8,266