pypi: PyMOL | Projects | Ecosyste.ms: Papers

10.1038/srep46282

The structure of Lactococcus lactis thioredoxin reductase reveals molecular features of photo-oxidative damage
Cited by: 9
Author(s): Nicklas Skjoldager, M.B. Bang, Martin Rykær, Olof Björnberg, Michael J. Davies, Birte Svensson, Pernille Harris, Per Hägglund
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-00188-7

Tryptophan end-tagging for promoted lipopolysaccharide interactions and anti-inflammatory effects
Cited by: 12
Author(s): Shalini Singh, Aritreyee Datta, Artur Schmidtchen, Anirban Bhunia, Martin Malmsten
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-00767-8

Structural Insight into the Specific DNA Template Binding to DnaG primase in Bacteria
Cited by: 11
Author(s): Yingqin Zhou, Haiyun Luo, Zhongchuan Liu, Mu Yang, Xiaoyun Pang, Fei Sun, Ganggang Wang
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-00764-x

Modelling the three-dimensional structure of the right-terminal domain of pospiviroids
Cited by: 8
Author(s): Gerhard Steger
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-00954-7

Interplay of buried histidine protonation and protein stability in prion misfolding
Cited by: 15
Author(s): Anatoly Malevanets, P. Andrew Chong, D. Flemming Hansen, Paul Rizk, Yulong Sun, Hong Lin, Ranjith Muhandiram, Avijit Chakrabartty, Lewis E. Kay, Julie D. Forman-Kay, Shoshana J. Wodak
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-01049-z

The GPR139 reference agonists 1a and 7c, and tryptophan and phenylalanine share a common binding site
Cited by: 21
Author(s): Anne Cathrine Nøhr, Willem Jespers, Mohamed A. Shehata, Leonard Floryan, Vignir Ísberg, Knud Erik Andersen, Johan Åqvist, Hugo Gutiérrez‐de‐Terán, Hans Bräuner‐Osborne, David E. Gloriam
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-01087-7

Long lasting neutralization of C5 by SKY59, a novel recycling antibody, is a potential therapy for complement-mediated diseases
Cited by: 69
Author(s): Taku Fukuzawa, Zenjiro Sampei, Kenta Haraya, Yoshinao Ruike, Meiri Shida-Kawazoe, Yuichiro Shimizu, Siok Wan Gan, Masayasu Irie, Yoshinori Tsuboi, Hitoshi Tai, Tetsushi Sakiyama, Akihisa Sakamoto, Shinya Ishii, Atsuhiko Maeda, Yuki Iwayanagi, Norihito Shibahara, Mitsuko Shibuya, Gisaku Nakamura, Takeru Nambu, Akira Hayasaka, Futa Mimoto, Yuu Okura, Yuji Hori, Kiyoshi Habu, Manabu Wada, Takaaki Miura, Tatsuhiko Tachibana, Kazuo Honda, Hiroyuki Tsunoda, Takio Kitazawa, Yojiro Kawabe, Tomoyuki Igawa, Kunihiro Hattori, Jun-ichi Nezu
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-01497-7

Blue-light reception through quaternary transitions
Cited by: 21
Author(s): Christopher Engelhard, Ralph P. Diensthuber, Andreas Möglich, Robert Bittl
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-01491-z

Hydration effects on the efficacy of the Epidermal growth factor receptor kinase inhibitor afatinib
Cited by: 15
Author(s): Srinivasaraghavan Kannan, Mohan R. Pradhan, Garima Tiwari, Wei-Chong Tan, Balram Chowbay, Eng Huat Tan, Daniel Shao-Weng Tan, Chandra Verma
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-01880-4

Symmetry breaking during homodimeric assembly activates an E3 ubiquitin ligase
Cited by: 18
Author(s): Zhaofeng Ye, Patrick G. Needham, Samuel K. Estabrooks, Susan K. Whitaker, Brandon L. Garcia, Saurav Misra, Jeffrey L. Brodsky, Carlos J. Camacho
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02219-9

Crystal structure of TAZ-TEAD complex reveals a distinct interaction mode from that of YAP-TEAD complex
Cited by: 72
Author(s): Hung Yi Kristal Kaan, Siew Wee Chan, Siew Kim Joyce Tan, Feng Guo, Chun Jye Lim, Wanjin Hong, Haiwei Song
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02322-x

The molecular determinants for distinguishing between ubiquitin and NEDD8 by USP2
Cited by: 8
Author(s): Yung-Cheng Shin, Jou-Han Chen, Shih‐Chung Chang
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02677-1

Probing the Roles of Calcium-Binding Sites during the Folding of Human Peptidylarginine Deiminase 4
Cited by: 15
Author(s): Yiliang Liu, Chien-Yun Lee, Yu-Ni Huang, Huiyi Chen, Guang‐Yaw Liu, Hui‐Chih Hung
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-01737-w

In silico analyses of deleterious missense SNPs of human apolipoprotein E3
Cited by: 24
Author(s): Állan S. Pires, William F. Porto, Octávio L. Franco, Sérgio Amorim de Alencar
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02489-3

A Benzothiazole Derivative (5g) Induces DNA Damage And Potent G2/M Arrest In Cancer Cells
Cited by: 20
Author(s): Mahesh Hegde, Supriya V. Vartak, C. Kavitha, Hanumappa Ananda, Prasanna D. Shivaramu, Vidya Gopalakrishnan, Bibha Choudhary, Kanchugarakoppal S. Rangappa, Sathees C. Raghavan
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02900-z

The malate sensing two-component system MaeKR is a non-canonical class of sensory complex for C4-dicarboxylates
Cited by: 5
Author(s): Laura Miguel-Romero, Patricia Casino, José María Landete, Vicente Monedero, Manuel Zúñiga, Alberto Marina
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03003-5

Network Analysis Reveals the Recognition Mechanism for Dimer Formation of Bulb-type Lectins
Cited by: 15
Author(s): Yunjie Zhao, Yiren Jian, Zhichao Liu, Huan Liu, Qin Liu, Chen Chanyou, Zhangyong Li, Lu Wang, H. Howie Huang, Chen Zeng
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03177-y

PH-Dependent Enantioselectivity of D-amino Acid Oxidase in Aqueous Solution
Cited by: 8
Author(s): Qingju Liu, Li Chen, Zhikun Zhang, Bibai Du, Yong Xiao, Kuo-Pin Yang, Lingling Gong, Li Wu, Xiangjun Li, Yi He
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03506-1

Regulatory Functions of Cellular Energy Sensor SNF1-Related Kinase1 for Leaf Senescence Delay through ETHYLENE- INSENSITIVE3 Repression
Cited by: 31
Author(s): Geun Don Kim, Young Hee Cho, Sang Dong Yoo
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03417-1

Novel Class IIa-Selective Histone Deacetylase Inhibitors Discovered Using an in Silico Virtual Screening Approach
Cited by: 36
Author(s): Kai Cheng Hsu, Chang Yi Liu, Tony Eight Lin, Jui Hua Hsieh, Tzu Ying Sung, Hui-Ju Tseng, Jinn-Moon Yang, Wei Huang
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03088-y

Gorge Motions of Acetylcholinesterase Revealed by Microsecond Molecular Dynamics Simulations
Cited by: 24
Author(s): Shanmei Cheng, Wanling Song, Xiaojing Yuan, Yechun Xu
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03335-2

Mechanical stability of talin rod controls cell migration and substrate sensing
Cited by: 43
Author(s): Rolle Rahikainen, Magdaléna von Essen, Markus Schaefer, Lei Qi, Latifeh Azizi, Conor Kelly, Teemu O. Ihalainen, Bernhard Wehrle-Haller, Martin Bastmeyer, Cai Huang, Vesa P. Hytönen
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03513-2

Hydrogen gas protects IP3Rs by reducing disulfide bridges in human keratinocytes under oxidative stress
Cited by: 11
Author(s): Chieh‐Shan Wu, Wen Li Hsu, M. H. Tsai, Jin-Wei Liang, Jian Lu, Chia Jung Yen, Hsin Su Yu, Мами Нода, Cheng-Hsien Lu, Chu Huang Chen, Shian Jang Yan, Tohru Yoshioka
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02756-3

The role of Antibody Vκ Framework 3 region towards Antigen binding: Effects on recombinant production and Protein L binding
Cited by: 33
Author(s): Chinh Tran-To Su, Wei-Li Ling, Wai-Heng Lua, Jun‐Jie Poh, Samuel Ken‐En Gan
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03323-6

Conformational plasticity and evolutionary analysis of the myotilin tandem Ig domains
Cited by: 11
Author(s): Vid Puž, Miha Pavšič, Brigita Lenarčič, Kristina Djinović-Carugo
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-04481-3

Crucial role of 4-deoxy-L-erythro-5-hexoseulose uronate reductase for alginate utilization revealed by adaptive evolution in engineered Saccharomyces cerevisiae
Cited by: 9
Author(s): Fumiya Matsuoka, Makoto Hirayama, Takayuki Kashihara, Hideki Tanaka, Wataru Hashimoto, Kousaku Murata, Shigeyuki Kawai
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-04064-2

YvcK, a protein required for cell wall integrity and optimal carbon source utilization, binds uridine diphosphate-sugars
Cited by: 16
Author(s): Elodie Foulquier, Anne Galinier
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02664-6

The role of the FliD C-terminal domain in pentamer formation and interaction with FliT
Cited by: 3
Author(s): Hee Jung Kim, Woongjae Yoo, Kyeong Sik Jin, Sangryeol Ryu, Hyung Ho Lee
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-04550-7

Crystal structure of Pelagibacterium halotolerans PE8: New insight into its substrate-binding pattern
Cited by: 4
Author(s): Ying‐Yi Huo, Suhua Li, Jing Huang, Zhen Rong, Zhao Wang, Zhengyang Li, Rui Ji, Siyun Kuang, Heng‐Lin Cui, Jixi Li, Xue-Wei Xu
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-03041-z

A channelopathy mutation in the voltage-sensor discloses contributions of a conserved phenylalanine to gating properties of Kv1.1 channels and ataxia
Cited by: 13
Author(s): Sonia Hasan, Cecilia Bove, Gabriella Silvestri, Elide Mantuano, Anna Modoni, Liana Veneziano, Lara Macchioni, Thérèse Hunter, Gary J. Hunter, Mauro Pessia, Maria Cristina D’Adamo
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-04518-7

A novel function for globulin in sequestering plant hormone: Crystal structure of Wrightia tinctoria 11S globulin in complex with auxin
Cited by: 7
Author(s): Pramod Kumar, Pooja Kesari, Sonali Dhindwal, Ashish Choudhary, Madhusudhanarao Katiki, . Neetu, Aparna Verma, Kiran Ambatipudi, Shailly Tomar, Ashwani Sharma, Girish Mishra, Pravindra Kumar
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05388-9

A variation in PANK2 gene is causing Pantothenate kinase-associated Neurodegeneration in a family from Jammu and Kashmir – India
Cited by: 6
Author(s): Arshia Angural, Inderpal Singh, Ankit Mahajan, Pranav Pandoh, Manoj K. Dhar, Sanjana Kaul, Vivek Verma, Ekta Rai, Sushil Razdan, Kamal Kishore Pandita, Swarkar Sharma
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05032-6

X-Ray snapshots of a pyridoxal enzyme: a catalytic mechanism involving concerted [1,5]-hydrogen sigmatropy in methionine γ-lyase
Cited by: 10
Author(s): Dan Sato, T. Shiba, T. Karaki, Wataru Yamagata, Tomoyoshi Nozaki, Takashi Nakazawa, Shigeharu Harada
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05354-5

AhpC of the mycobacterial antioxidant defense system and its interaction with its reducing partner Thioredoxin-C
Cited by: 19
Author(s): Chui Fann Wong, Joon Shin, Malathy Sony Subramanian Manimekalai, Wuan Geok Saw, Zehao Yin, Shashi Bhushan, Arvind Kumar, Priya Ragunathan, Gerhard Grüber
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05325-w

NEK1 kinase domain structure and its dynamic protein interactome after exposure to Cisplatin
Cited by: 25
Author(s): Talita Diniz Melo‐Hanchuk, Priscila Ferreira Slepicka, Gabriela Vaz Meirelles, Fernanda Luisa Basei, D.V. Lovato, Daniela Campos Granato, Bianca Alves Pauletti, Romênia R. Domingues, Adriana Franco Paes Leme, Alessandra Luíza Pelegrini, Guido Lenz, S. Knapp, J.M. Elkins, Jörg Kobarg
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-04554-3

Phthalide Derivatives from Angelica Sinensis Decrease Hemoglobin Oxygen Affinity: A New Allosteric-Modulating Mechanism and Potential Use as 2,3-BPG Functional Substitutes
Cited by: 8
Author(s): Wei‐Ren Chen, Youqing Yu, Muhammad Zulfajri, Ping-Cheng Lin, Chia C. Wang
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05911-y

Ergodicity breaking on the neuronal surface emerges from random switching between diffusive states
Cited by: 72
Author(s): Aleksander Weron, Krzysztof Burnecki, Elizabeth J. Akin, Laura Solé, Michał Balcerek, Michael M. Tamkun, Diego Krapf
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05931-8

Targeting PTPRZ inhibits stem cell-like properties and tumorigenicity in glioblastoma cells
Cited by: 50
Author(s): Akihiro Fujikawa, Hajime Sugawara, Taisaku Tanaka, Masahito Matsumoto, Kazuya Kuboyama, Ryoko Suzuki, Naomi Tanga, Atsuto Ogata, Makoto Masumura, Masaharu Noda
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05534-3

Modulation of RNA primer formation by Mn(II)-substituted T7 DNA primase
Cited by: 1
Author(s): Stefan Ilić, Sabine R. Akabayov, Roy Froimovici, Ron Meiry, Dan Vilenchik, Alfredo J. Hernandez, Haribabu Arthanari, Barak Akabayov
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-06277-x

Efficient generation of single domain antibodies with high affinities and enhanced thermal stabilities
Cited by: 7
Author(s): Naoya Shinozaki, Ryuji Hashimoto, Kiichi Fukui, Susumu Uchiyama
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-06319-4

Direct binding to GABARAP family members is essential for HIV-1 Nef plasma membrane localization
Cited by: 11
Author(s): Alexandra Boeske, Melanie Schwarten, Peixiang Ma, Markus Tusche, Jessica Mötter, Christina Möller, Philipp Neudecker, Silke Hoffmann, Dieter Willbold
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05449-z

How cholesteryl ester transfer protein can also be a potential triglyceride transporter
Cited by: 9
Author(s): Venkat R. Chirasani, Sanjib Senapati
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-05424-8

Adaptive evolution of a hyperthermophilic archaeon pinpoints a formate transporter as a critical factor for the growth enhancement on formate
Cited by: 12
Author(s): Hae-Chang Jung, Seong Hyuk Lee, Sung-Mok Lee, Young Jun An, Jung-Hyun Lee, Hyun Sook Lee, Sung Gyun Kang
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-07266-w

Observed crowding effects on Mycobacterium tuberculosis 2-trans-enoyl-ACP (CoA) reductase enzyme activity are not due to excluded volume only
Cited by: 11
Author(s): Mariane Rotta, Luís Fernando Saraiva Macedo Timmers, Carlos Sequeiros-Borja, Cristiano Valim Bizarro, Osmar Norberto de Souza, Daniel Silas Veras dos Santos, Luiz Augusto Basso
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-07457-5

A camelid single-domain antibody neutralizes botulinum neurotoxin A by blocking host receptor binding
Cited by: 15
Author(s): Guorui Yao, Kwok Ho Lam, Jasmin Weisemann, Lisheng Peng, Nadja Krez, Kay Perry, Charles B. Shoemaker, Min Dong, Andreas Rummel, Rongsheng Jin
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-08213-5

Characterization of C-terminal structure of MinC and its implication in evolution of bacterial cell division
Cited by: 9
Author(s): Suwen Yang, Qingya Shen, Shu Wang, Chunqiao Song, Zhen Lei, Shengnan Han, Xiaoying Zhang, Jimin Zheng, Zongchao Jia
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-08130-7

Kinetic and Structural Characterization of the Effects of Membrane on the Complex of Cytochrome b 5 and Cytochrome c
Cited by: 15
Author(s): Katherine A. Gentry, Elke Prade, Carlo Barnaba, Meng Zhang, Mukesh Mahajan, Sang Choul Im, G.M. Anantharamaiah, Shigeaki Nagao, Lucy Waskell, Ayyalusamy Ramamoorthy
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-07385-4

Extreme anoxia tolerance in crucian carp and goldfish through neofunctionalization of duplicated genes creating a new ethanol-producing pyruvate decarboxylase pathway
Cited by: 44
Author(s): Cathrine E. Fagernes, Kåre‐Olav Stensløkken, Åsmund K. Røhr, Michael Berenbrink, Stian Ellefsen, Göran Nilsson
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-08408-w

In silico analysis of Glanzmann variants of Calf-1 domain of αIIbβ3 integrin revealed dynamic allosteric effect
Cited by: 27
Author(s): Matthieu Goguet, Tarun Jairaj Narwani, Rachel Petermann, Vincent Jallu, Alexandre G. de Brevern
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-08368-1

A new method to investigate the catalytic mechanism of YhdE pyrophosphatase by using a pyrophosphate fluorescence probe
Cited by: 4
Author(s): Qingya Shen, Hongwei Tan, Guo‐wen Xing, Jimin Zheng, Zongchao Jia
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-05326-9

RGD delivery of truncated coagulase to tumor vasculature affords local thrombotic activity to induce infarction of tumors in mice
Cited by: 32
Author(s): Rana Jahanban‐Esfahlan, Khaled Seidi, Hassan Monhemi, Amir Daei Farshchi Adli, Babak Minofar, Payman Zare, Davoud Farajzadeh, Safar Farajnia, Ramezan Behzadi, Mehran Mesgari Abbasi, Nosratollah Zarghami, Tahereh Javaheri
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-09268-0

CRISPR/Cas9 editing reveals novel mechanisms of clustered microRNA regulation and function
Cited by: 31
Author(s): Lazaros Lataniotis, Andreas Albrecht, Fatma O. Kok, Clinton Monfries, Lorena Benedetti, Nathan D. Lawson, Simon M. Hughes, Kathleen Steinhöfel, Manuel Mayr, Anna Zampetaki
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-08252-y

Neodiversification of homeologous CLAVATA1-like receptor kinase genes in soybean leads to distinct developmental outcomes
Cited by: 17
Author(s): Saeid Mirzaei, Jacqueline Batley, Tarik El‐Mellouki, Shiming Liu, Khalid Meksem, Brett J. Ferguson, Peter M. Gresshoff
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-08743-y

Active Components of Leptospira Outer Membrane Protein LipL32 to Toll-Like Receptor 2
Cited by: 17
Author(s): Shen-Hsing Hsu, Cheng‐Chieh Hung, Ming‐Yang Chang, Yi-Ching Ko, Huang‐Yu Yang, Hsiang-Hao Hsu, Ya‐Chung Tian, Li‐Fang Chou, Rong-Long Pan, Fan‐Gang Tseng, Chunfeng Yang
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-09399-4

Bifunctional quorum-quenching and antibiotic-acylase MacQ forms a 170-kDa capsule-shaped molecule containing spacer polypeptides
Cited by: 13
Author(s): Y. Yasutake, Hiroyuki Kusada, Teppei Ebuchi, Satoshi Hanada, Yoichi Kamagata, Tomohiro Tamura, Nobutada Kimura
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-07966-3

One-domain CD4 Fused to Human Anti-CD16 Antibody Domain Mediates Effective Killing of HIV-1-Infected Cells
Cited by: 20
Author(s): Wei Li, Yanling Wu, Desheng Kong, Hyun-Jin Yang, Yanping Wang, Jiping Shao, Feng Yang, Weizao Chen, Liying Ma, Tianlei Ying, Dimiter S. Dimitrov
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-09718-9

Neutron crystallography of photoactive yellow protein reveals unusual protonation state of Arg52 in the crystal
Cited by: 19
Author(s): Kazuya Yonezawa, Nobutaka Shimizu, Kazuo Kurihara, Yoichi Yamazaki, Hironari Kamikubo, Mikio Kataoka
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-09941-4

Elucidation of Dietary Polyphenolics as Potential Inhibitor of Microtubule Affinity Regulating Kinase 4: In silico and In vitro Studies
Cited by: 86
Author(s): Parvez Khan, Safikur Rahman, Aarfa Queen, Saaliqa Manzoor, Farha Naz, Gulam Mustafa Hasan, Suaib Luqman, Jihoe Kim, Asimul Islam, Faizan Ahmad, Md. Imtaiyaz Hassan
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-018-27890-4

Characterization of influenza virus variants induced by treatment with the endonuclease inhibitor baloxavir marboxil
Cited by: 293
Author(s): Shinya Omoto, Valentina Speranzini, Takashi Hashimoto, Takeshi Noshi, Hiroto Yamaguchi, Makoto Kikuchi, Keiko Kawaguchi, Takeki Uehara, Toetsu Shishido, Akira Naito, Stephen Cusack
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-28094-6

Comparative analysis of xenobiotic metabolising N-acetyltransferases from ten non-human primates as in vitro models of human homologues
Cited by: 11
Author(s): Theodora Tsirka, Μαρία Κωνσταντοπούλου, Audrey Sabbagh, Brigitte Crouau‐Roy, Ali Ryan, Edith Sim, Sotiria Boukouvala, Giannoulis Fakis
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-28056-y

GTP-binding facilitates EB1 recruitment onto microtubules by relieving its auto-inhibition
Cited by: 6
Author(s): K. K. Gireesh, Annette D. Shine, R. Bhagya Lakshmi, Vinesh Vijayan, Tapas Manna
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-28235-x

Crystallization of a human galectin-3 variant with two ordered segments in the shortened N-terminal tail
Cited by: 36
Author(s): Andrea Flores-Ibarra, Sabine Vértesy, F.J. Medrano, Hans‐Joachim Gabius, Antonio Romero
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-28656-8

Structural insights into ubiquitin phosphorylation by PINK1
Cited by: 31
Author(s): Kei Okatsu, Yusuke Sato, Koji Yamano, Noriyuki Matsuda, Lumi Negishi, Akiko Takahashi, Atsushi Yamagata, Sakurako Goto-Ito, Masaki Mishima, Yutaka Ito, Toshihiko Oka, Keiji Tanaka, Shuya Fukai
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-28752-9

Structure and energy based quantitative missense variant effect analysis provides insights into drug resistance mechanisms of anaplastic lymphoma kinase mutations
Cited by: 10
Author(s): Jianzong Li, Yue Huang, Miaomiao Wu, Chuanfang Wu, Xin Li, Ji Bao
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-29070-w

Structural Insight into Substrate Specificity of 3-Hydroxypropionyl-Coenzyme A Dehydratase from Metallosphaera sedula
Cited by: 8
Author(s): Dong‐Hoon Lee, Kyungjin Kim
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-29396-5

A systematic dissection of sequence elements determining β-Klotho and FGF interaction and signaling
Cited by: 15
Author(s): Sally Yu Shi, Ya‐Wen Lu, Jason Richardson, Xiaoshan Min, Jennifer Weiszmann, William G. Richards, Zhong Lin Wang, Zhongqi Zhang, Jun Zhang, Yang Li
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-28988-5

Structural and Biochemical Characterization of AaL, a Quorum Quenching Lactonase with Unusual Kinetic Properties
Cited by: 34
Author(s): Céline Bergonzi, Michael Schwab, Tikeswar Naik, David Daudé, Éric Chabrière, Mikael Elias
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-29535-y

Metal-cation regulation of enzyme dynamics is a key factor influencing the activity of S-adenosyl-l-homocysteine hydrolase from Pseudomonas aeruginosa
Cited by: 13
Author(s): Justyna Czyrko, Joanna Śliwiak, Barbara Imiołczyk, Zofia Gdaniec, Mariusz Jaskólski, Krzysztof Brzeziński
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-29439-x

Biochemical and structural characterization of a mannose binding jacalin-related lectin with two-sugar binding sites from pineapple (Ananas comosus) stem
Cited by: 16
Author(s): Mohamed Azarkan, Georges Feller, Julie Vandenameele, R. Herman, Rachida El Mahyaoui, Eric Sauvage, Arnaud Vanden Broeck, André Matagne, Paulette Charlier, Frédéric Kerff
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-30042-3

Structure and nucleic acid binding properties of KOW domains 4 and 6–7 of human transcription elongation factor DSIF
Cited by: 9
Author(s): Philipp K Zuber, Lukas Hahn, Anne Reinl, Kristian Schweimer, Stefan H. Knauer, Maxwell E. Gottesman, Paul Rösch, Birgitta M. Wöhrl
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-30195-1

Effects of polymorphic variation on the thermostability of heterogenous populations of CYP3A4 and CYP2C9 enzymes in solution
Cited by: 7
Author(s): Lauren B. Arendse, Jonathan M. Blackburn
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-30508-4

Identification and characterization of a novel β-D-galactosidase that releases pyruvylated galactose
Cited by: 8
Author(s): Yujiro Higuchi, Hitomi Matsufuji, Masanari Tanuma, T. Arakawa, Kazuki Mori, Chihaya Yamada, Risa Shofia, Eiji Matsunaga, Kosuke Tashiro, Shinya Fushinobu, Kaoru Takegawa
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-30411-y

Evolutionary, structural and expression analysis of core genes involved in starch synthesis
Cited by: 62
Author(s): Jianzhou Qu, Shutu Xu, Zhengquan Zhang, Guangzhou Chen, Yuyue Zhong, Linsan Liu, Renhe Zhang, Jiquan Xue, Dongwei Guo
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31272-1

Predictions of novel Schistosoma mansoni - human protein interactions consistent with experimental data
Cited by: 8
Author(s): Javona White Bear, Ting Long, Danielle Skinner, James H. McKerrow
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31080-7

Application of the fragment molecular orbital method to discover novel natural products for prion disease
Cited by: 15
Author(s): Jiwon Choi, Hyo Jin Kim, Xuemei Jin, Hyun Jeong Lim, Songmi Kim, In-Soon Roh, Hyung-Lyun Kang, Kyoung Tai No, Hyun Joo Sohn
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31370-0

X-ray structure analysis of bacteriorhodopsin at 1.3 Å resolution
Cited by: 45
Author(s): N. Hasegawa, H. Jonotsuka, Kunio Miki, Kazuki Takeda
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31417-2

A novel glycosylated anti-CD20 monoclonal antibody from transgenic cattle
Cited by: 8
Author(s): Ran Zhang, C. C. H. Tang, Haipeng Guo, Bo Tang, Sheng Hou, Z. H. Lei, Jianwu Wang, Fang Ding, Junxing Zhao, Haiping Wang, Zhongzhou Chen, Yong Dai, Ning Li
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31394-6

Structural basis for the complete resistance of the human prion protein mutant G127V to prion disease
Cited by: 28
Author(s): Zhen Zheng, Meilan Zhang, Yong‐Heng Wang, Ronghua Ma, Cheng Guo, Liubin Feng, Jihui Wu, Hongwei Yao, Donghai Lin
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31630-z

Differences in antigenic sites and other functional regions between genotype A and G mumps virus surface proteins
Cited by: 20
Author(s): Sigrid Gouma, Tessa Vermeire, Steven Van Gucht, Lennart Martens, Veronik Hutse, Jeroen Cremer, Paul A. Rota, Geert Leroux‐Roels, Marion Koopmans, Rob van Binnendijk, Elien Vandermarliere
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31142-w

Structural characterization of a novel KH-domain containing plant chloroplast endonuclease
Cited by: 4
Author(s): Ashok K. Rout, Himanshu Singh, Sunita Patel, Vandana Raghvan, Saurabh Gautam, Renu Minda, Basuthkar J. Rao, Kandala V. R. Chary
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-32080-3

Sharing of human milk oligosaccharides degradants within bifidobacterial communities in faecal cultures supplemented with Bifidobacterium bifidum
Cited by: 106
Author(s): Aina Gotoh, Toshihiko Katoh, Mikiyasu Sakanaka, Yiwei Ling, Chihaya Yamada, Shinichiro Asakuma, Tadasu Urashima, Yusuke Tomabechi, Ayako Katayama-Ikegami, Shin Kurihara, Kenji Yamamoto, Gaku Harata, Fang He, Junko Hirose, Motomitsu Kitaoka, Shujiro Okuda, Takane Katayama
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-32446-7

Crystal structures of multicopper oxidase CueO G304K mutant: structural basis of the increased laccase activity
Cited by: 15
Author(s): Hanqian Wang, Xiaoqing Liu, Jintong Zhao, Qingxia Yue, Yehai Yan, Zengqiang Gao, Yuhui Dong, Zhiyong Zhang, Yanting Fan, Jian Tian, Ningfeng Wu, Yong Gong
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-32481-4

Tetrahydrobiopterin modulates ubiquitin conjugation to UBC13/UBE2N and proteasome activity by S-nitrosation
Cited by: 5
Author(s): Jade Bailey, Simon Davis, Andrew Shaw, Marina Diotallevi, Román Fischer, Matthew A. Benson, Hanneng Zhu, James Brown, Shoumo Bhattacharya, Benedikt M. Kessler, Keith M. Channon, Mark J. Crabtree
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-32536-6

Elucidating a role for the cytoplasmic domain in the Mycobacterium tuberculosis mechanosensitive channel of large conductance
Cited by: 7
Author(s): Nadia Herrera, Grigory Maksaev, Elizabeth S. Haswell, Douglas C Rees
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-32817-0

Human and mouse albumin bind their respective neonatal Fc receptors differently
Cited by: 40
Author(s): Jeannette Nilsen, Malin C. Bern, Kine Marita Knudsen Sand, Algirdas Grevys, Bjørn Dalhus, Inger Sandlie, Jan Terje Andersen
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-33085-8

Two Engineered OBPs with opposite temperature-dependent affinities towards 1-aminoanthracene
Cited by: 7
Author(s): Filipa Gonçalves, Tarsila G. Castro, Nuno G. Azóia, Artur Ribeiro, Carla Silva
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-33289-y

Tuneable poration: host defense peptides as sequence probes for antimicrobial mechanisms
Cited by: 25
Author(s): Marc-Philipp Pfeil, Alice L. B. Pyne, Valeria Losasso, Jascindra Ravi, Baptiste Lamarre, Nilofar Faruqui, Hasan Alkassem, Kenneth R. Hammond, Peter J. Judge, Martyn Winn, Glenn Martyna, Jason Crain, Anthony Watts, Bart W. Hoogenboom, Maxim G. Ryadnov
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-33371-5

2.0 Å resolution crystal structure of human polκ reveals a new catalytic function of N-clasp in DNA replication
Cited by: 7
Author(s): Vikash Kumar Jha, Hong Li
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-33394-y

Engineering a branching sucrase for flavonoid glucoside diversification
Cited by: 14
Author(s): Yannick Malbert, Claire Moulis, Yoann Brison, Sandrine Morel, Isabelle André, Magali Remaud‐Siméon
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-33484-x

Synthetic cADPR analogues may form only one of two possible conformational diastereoisomers
Cited by: 2
Author(s): Joanna M. Watt, Mark Thomas, Barry V. L. Potter
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-33977-9

Off-axis rotor in Enterococcus hirae V-ATPase visualized by Zernike phase plate single-particle cryo-electron microscopy
Cited by: 9
Author(s): Jun Tsunoda, Chihong Song, Fabiana Lica Imai, Junichi Takagi, Hiroshi Ueno, Takeshi Murata, Ryota Iino, Kazuyoshi Murata
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-34090-7

GroEL/ES mediated the in vivo recovery of TRAIL inclusion bodies in Escherichia coli
Cited by: 10
Author(s): Zhanqing Wang, Min Zhang, Xin Lv, Jiying Fan, Jian Zhang, Jing Sun, Yang Shen
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-34259-0

VCE-004.8, A Multitarget Cannabinoquinone, Attenuates Adipogenesis and Prevents Diet-Induced Obesity
Cited by: 17
Author(s): Belén Palomares, Francisco Ruíz-Pino, Carmen Navarrete, Inmaculada Velasco, Miguel A. Sánchez-Garrido, Carla Jiménez‐Jiménez, Carolina Pavicic, María J. Vázquez, Giovanni Appendino, M. Luz Bellido, Marco A. Calzado, Manuel Tena‐Sempere, Eduardo Muñóz
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-34509-1

Systems pharmacology reveals the unique mechanism features of Shenzhu Capsule for treatment of ulcerative colitis in comparison with synthetic drugs
Cited by: 35
Author(s): Wuwen Feng, Hui Ao, Shi‐Jun Yue, Cheng Peng
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-34534-0

Structure of bacterial oligosaccharyltransferase PglB bound to a reactive LLO and an inhibitory peptide
Cited by: 26
Author(s): Maja Napiórkowska, Jérémy Boilevin, Tamis Darbre, Jean‐Louis Reymond, Kaspar P. Locher
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-34941-3

Crystallographic and kinetic analyses of human IPMK reveal disordered domains modulate ATP binding and kinase activity
Cited by: 9
Author(s): Corey D. Seacrist, Raymond D. Blind
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-35153-5

Structural basis for dimerization of the death effector domain of the F122A mutant of Caspase-8
Cited by: 16
Author(s): Chen Shen, Junchen Pei, Xiaomin Guo, Lu Zhou, Qinkai Li, Jing Quan
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-34956-w

Structure and oligomerization of the periplasmic domain of GspL from the type II secretion system of Pseudomonas aeruginosa
Cited by: 11
Author(s): Aleksandra Fulara, Isabel Vandenberghe, Randy J. Read, Bart Devreese, Savvas N. Savvides
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-34887-6

Blocking nuclear export of HSPA8 after heat shock stress severely alters cell survival
Cited by: 18
Author(s): Fengjuan Wang, Srinivasa Reddy Bonam, Nicolas Schall, Lauriane Kuhn, Philippe Hammann, Olivier Chaloin, Jean‐Baptiste Madinier, Jean‐Paul Briand, Nicolas Pagé, Sylviane Muller
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-35509-x

Structure and Function Studies of Asian Corn Borer Ostrinia furnacalis Pheromone Binding Protein2
Cited by: 9
Author(s): Suman Mazumder, Salik Ram Dahal, Bharat Chaudhary, Smita Mohanty
Software Mentions: 1
Published: over 7 years ago

Projects: pypi: PyMOL

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Papers Mentioning PyMOL 8,266