Projects: pypi: PyMOL
https://packages.ecosyste.ms/registries/pypi.org/packages/PyMOL
1 version
Latest release: almost 3 years ago
5 dependent packages
Science Score: 90/100
Starting Score: 100 points
Bonuses:
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem
Very Likely Science (90)
Papers Mentioning PyMOL 8,266
10.18632/oncotarget.9660
Immunogenicity of mammary tumor cells can be induced by shikonin via direct binding-interference with hnRNPA1Cited by: 19
Author(s): Shu Yi Yin, Thomas Efferth, Feng Jian, Yung‐Hsiang Chen, Chia I. Liu, Andrew H.J. Wang, Yet Ran Chen, Pei Wen Hsiao, Ning Yang
Software Mentions: 1
Published: about 10 years ago
10.18632/oncotarget.10791
Structural basis for exploring the allosteric inhibition of human kidney type glutaminaseCited by: 35
Author(s): Sarath Ramachandran, Catherine Pan, Sarah C. Zimmermann, Bridget Duvall, Takashi Tsukamoto, Boon Chuan Low, J. Sivaraman
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.11465
Developing an anticancer copper(II) pro-drug based on the nature of cancer cell and human serum albumin carrier IIA subdomain: mouse model of breast cancerCited by: 17
Author(s): Yanzi Gou, Yao Zhang, Jinxu Qi, Shifang Chen, Zuping Zhou, Xiaoyang Wu, Hong Liang, Feng Yang
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.11005
The trans-membrane domain of Bcl-2α, but not its hydrophobic cleft, is a critical determinant for efficient IP3 receptor inhibitionCited by: 31
Author(s): Hristina Ivanova, Abigaël Ritaine, Larry E. Wagner, Tomas Luyten, George Shapovalov, Kirsten Welkenhuyzen, Bruno Seitaj, Giovanni Monaco, Humbert De Smedt, Natalia Prevarskaya, David I. Yule, Jan B. Parys, Geert Bultynck
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.12167
Induction of anti-EGFR immune response with mimotopes identified from a phage display peptide library by panitumumabCited by: 11
Author(s): Aidong Wang, Ming Cui, Hong Qu, Jiabo Di, Zaozao Wang, Jiadi Xing, Fan Wu, Wei Wu, Xicheng Wang, Lin Shen, Beihai Jiang, Xiangqian Su
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.14428
Blockade of the malignant phenotype by <i>β</i>-subunit selective noncovalent inhibition of immuno- and constitutive proteasomesCited by: 12
Author(s): Bruno O. Villoutreix, Abdel‐Majid Khatib, Yanwei Cheng, Maria A. Miteva, Xavier Maréchal, Joëlle Vidal, Michèle Reboud‐Ravaux
Software Mentions: 1
Published: over 9 years ago
10.18632/oncotarget.14068
Antagonizing functions of BARD1 and its alternatively spliced variant BARD1δ in telomere stabilityCited by: 8
Author(s): Maxim Pilyugin, Pierre Alain André, Magdalena Ratajska, Alina Kuźniacka, Janusz Limon, Benjamin B. Tournier, Julien Colas, GJ Laurent, Irmgard Irminger-Finger
Software Mentions: 1
Published: over 9 years ago
10.18632/oncotarget.11932
Identification of a structurally novel BTK mutation that drives ibrutinib resistance in CLLCited by: 63
Author(s): Shruti Sharma, Natalie Galanina, Guo A, Jimmy Lee, Sabah Kadri, Charles Van Slambrouck, Bradley Long, Y. Lynn Wang, Mei Ming, Larissa V. Furtado, Jeremy P. Segal, Wendy Stock, Girish Venkataraman, Wei Tang, Ping Lü, Y. Lynn Wang
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.13157
Selective function-blocking monoclonal human antibody highlights the important role of membrane type-1 matrix metalloproteinase (MT1-MMP) in metastasisCited by: 35
Author(s): Albert G. Remacle, Piotr Cieplak, Dong Hyun Nam, Sergey A. Shiryaev, Xin Ge, Alex Y. Strongin
Software Mentions: 1
Published: about 10 years ago
10.18632/oncotarget.16459
A(H1N1)pdm09 influenza infection: vaccine inefficiencyCited by: 12
Author(s): Nehemya Friedman, Yaron Drori, Rakefet Pando, Aharona Glatman‐Freedman, Hanna Sefty, Ravit Bassal, Yaniv Stein, Tamy Shohat, Ella Mendelson, Musa Hindiyeh, Michal Mandelboim
Software Mentions: 1
Published: over 9 years ago
10.18632/oncotarget.18098
BRCA2, EGFR, and NTRK mutations in mismatch repair-deficient colorectal cancers with MSH2 or MLH1 mutationsCited by: 26
Author(s): Safoora Deihimi, Avital Lev, Michael Slifker, Elena Shagisultanova, Qifang Xu, Kyungsuk Jung, Namrata Vijayvergia, Eric A. Ross, Joanne Xiu, Jeffrey Swensen, Zoran Gatalica, Mark D. Andrake, Roland L. Dunbrack, Wafik S. El‐Deiry
Software Mentions: 1
Published: about 9 years ago
10.18632/oncotarget.10648
Selective compounds enhance osteoblastic activity by targeting HECT domain of ubiquitin ligase Smurf1Cited by: 10
Author(s): Yuan Zhang, Cheng Wang, Ya Cao, Yongqing Gu, Lingqiang Zhang
Software Mentions: 1
Published: almost 10 years ago
10.18632/oncotarget.17558
Structural basis of a novel heterodimeric Fc for bispecific antibody productionCited by: 34
Author(s): Hudie Wei, Haiyan Cai, Yuhao Jin, Pilin Wang, Qingqing Zhang, Yen-Hwei Lin, Weixiao Wang, Jinke Cheng, Naiyan Zeng, Ting Xu, Aiwu Zhou
Software Mentions: 1
Published: about 9 years ago
10.18632/oncotarget.19101
Acetyl-lupeolic acid inhibits Akt signaling and induces apoptosis in chemoresistant prostate cancer cells <i>in vitro</i> and <i>in vivo</i>Cited by: 15
Author(s): Claudia Schmidt, Cornelia Loos, Lu Jin, Michael Schmiech, Christoph Q. Schmidt, Menna El Gaafary, Tatiana Syrovets, Thomas Simmet
Software Mentions: 1
Published: about 9 years ago
10.18632/oncotarget.18070
Lysine methylation of FEN1 by SET7 is essential for its cellular response to replicative stressCited by: 11
Author(s): Palaniraja Thandapani, Anthony M. Couturier, Zhenbao Yu, Xing Li, Jean-François Couture, Shawn Li, Jean–Yves Masson, Stéphane Richard
Software Mentions: 1
Published: about 9 years ago
10.18632/oncotarget.17287
Triterpenoids from<i>Aglaia abbreviata</i>exert cytotoxicity and multidrug resistant reversal effect in MCF-7/ADM cells via reactive oxygen species induction and P-glycoprotein inhibitionCited by: 5
Author(s): Juan Cen, Bingbing Zheng, Rubing Bai, Li Zhang, Feng Zhang, Xia Zhang
Software Mentions: 1
Published: about 9 years ago
10.18632/oncotarget.18630
Neuropilin-1 is a glial cell line-derived neurotrophic factor receptor in glioblastomaCited by: 24
Author(s): Shuang Sun, Yu Lei, Qi Li, Yue Wu, Lin Zhang, Peipei Mu, Guangquan Ji, Chuanxi Tang, Yuqian Wang, Jian Gao, Jin Gao, Li Li, Lang Zhuo, Yunqing Li, Dayong Gao
Software Mentions: 1
Published: about 9 years ago
10.18632/oncotarget.19323
Understanding the mechanism of binding between Gab2 and the C terminal SH3 domain from Grb2Cited by: 8
Author(s): Angelo Toto, Daniela Bonetti, Alfonso De Simone, Stefano Gianni
Software Mentions: 1
Published: almost 9 years ago
10.18632/oncotarget.20915
Virtual screening approach to identifying influenza virus neuraminidase inhibitors using molecular docking combined with machine-learning-based scoring functionCited by: 37
Author(s): Li Zhang, Haixin Ai, Shimeng Li, Mengyuan Qi, Zhao Jian, Qi Zhao, Hongsheng Liu
Software Mentions: 1
Published: almost 9 years ago
10.18632/oncotarget.21822
Canis familiaris allergen Can f 6: expression, purification and analysis of B-cell epitopes in Chinese dog allergic childrenCited by: 7
Author(s): Yujie Wang, Lin Li, Weijuan Song, Yanjun Zhou, Mengda Cao, Xianbo Zuo, Ji‐Fu Wei
Software Mentions: 1
Published: almost 9 years ago
10.18632/oncotarget.20556
Inhibition of pressure-activated cancer cell adhesion by FAK-derived peptidesCited by: 5
Author(s): Bixi Zeng, Dinesh Devadoss, Shouye Wang, Emilie E. Vomhof-DeKrey, Leslie A. Kuhn, Marc D. Basson
Software Mentions: 1
Published: almost 9 years ago
10.18632/oncotarget.21416
A systematic assessment of chemical, genetic, and epigenetic factors influencing the activity of anticancer drug KP1019 (FFC14A)Cited by: 20
Author(s): Upendarrao Golla, Swati Swagatika, Sakshi Chauhan, Raghuvir Singh Tomar
Software Mentions: 1
Published: almost 9 years ago
10.18632/oncotarget.22439
Pharmacologic characterization of SHR8443, a novel dual inhibitor of phosphatidylinositol 3-kinase and mammalian target of rapamycinCited by: 6
Author(s): Conghua Xie, Xiangling Chen, Mingyue Zheng, Xiaohong Liu, Hongbin Wang, Liguang Lou
Software Mentions: 1
Published: over 8 years ago
10.18632/oncotarget.22797
Assessment of antimicrobial and wound healing effects of Brevinin-2Ta against the bacterium<i>Klebsiella pneumoniae</i>in dermally-wounded ratsCited by: 32
Author(s): Siqin Liu, Qilin Long, Yang Xu, Jun Wang, Zhongwei Xu, Lei Wang, Mei Zhou, Yuxin Wu, Christopher Shaw
Software Mentions: 1
Published: over 8 years ago
10.18632/oncotarget.22829
Role of the N-terminal lid in regulating the interaction of phosphorylated MDMX with p53Cited by: 8
Author(s): Jane Chan, Dawn Xin Ping Koh, Yun Liu, Thomas L. Joseph, David P. Lane, Chandra Verma, Yaw Sing Tan
Software Mentions: 1
Published: over 8 years ago
10.18632/oncotarget.22556
Dietary quercetin potentiates the antiproliferative effect of interferon-α in hepatocellular carcinoma cells through activation of JAK/STAT pathway signaling by inhibition of SHP2 phosphataseCited by: 35
Author(s): Ighodaro Igbe, Xiaofei Shen, Jiao Wei, Zhe Qiang, Teng Deng, Li Sheng, Wanli Liu, Han‐Wei Liu, Guolin Zhang, Fei Wang
Software Mentions: 1
Published: over 8 years ago
10.18632/oncotarget.24490
Structural considerations for functional anti-EGFR × anti-CD3 bispecific diabodies in light of domain order and binding affinityCited by: 11
Author(s): Ryutaro Asano, Keisuke Nagai, Koki Makabe, Kazuaki Takahashi, Takashi Kumagai, Haruko Kawaguchi, Hiromi Ogata, Kyoko Arai, Mitsuo Umetsu, Izumi Kumagai
Software Mentions: 1
Published: over 8 years ago
10.18632/oncotarget.25149
Disturbed alternative splicing of FIR (PUF60) directed cyclin E overexpression in esophageal cancersCited by: 8
Author(s): Yukiko Ogura, Tyuji Hoshino, Nobuko Tanaka, Guzhanuer Ailiken, Sohei Kobayashi, Kazuo Kïtamura, Bahityar Rahmutulla, Masayuki Kano, Kentarou Murakami, Yasunori Akutsu, Fumio Nomura, Sakae Itoga, Hisahiro Matsubara, Hiroshi Matsushita
Software Mentions: 1
Published: about 8 years ago
10.18632/oncotarget.25576
Activating HER3 mutations in breast cancerCited by: 21
Author(s): Rosalin Mishra, Samar Alanazi, Long Yuan, Thomas Solomon, Tarjani Thaker, Natalia Jura, Joan T. Garrett
Software Mentions: 1
Published: about 8 years ago
10.18632/oncotarget.25549
<i>In silico-designed</i> mutations increase variable new-antigen receptor single-domain antibodies for VEGF165 neutralizationCited by: 4
Author(s): Dalia Millán-Gómez, Salvador Dueñas, Patricia L A Muñoz, Tanya A. Camacho-Villegas, Carolina Elosua, Olivia Cabanillas-Bernal, Teresa Escalante, Almudena Perona, David Abia, Florian Drescher, Pierrick G.J. Fournier, Marco A. Ramos, Rosa E. Mares, Jorge Paniagua-Solís, Teresa Mata-Gonzalez, Jorge González-Canudas, Robert M. Hoffman, Alexei F. Licea-Navarro, Noemí Sánchez-Campos
Software Mentions: 1
Published: about 8 years ago
10.18632/oncotarget.26432
Insight into the PTEN - p85α interaction and lipid binding properties of the p85α BH domainCited by: 3
Author(s): Jeremy Marshall, Paul Mellor, Xuan Ruan, Dielle E. Whitecross, Stanley A. Moore, Deborah H. Anderson
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.26514
Targeting protein kinase CK2 and CDK4/6 pathways with a multi-kinase inhibitor ON108110 suppresses pro-survival signaling and growth in mantle cell lymphoma and T-acute lymphoblastic leukemiaCited by: 6
Author(s): Amol Padgaonkar, Olga Rechkoblit, Rodgrigo Vasquez-Del Carpio, Venkat R. Pallela, Drc Venkata Subbaiah, Stephen C. Cosenza, Stacey J. Baker, M. V. Ramana Reddy, Aneel K. Aggarwal, E. Premkumar Reddy
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.26623
An ingenious non-spherical mesoporous silica nanoparticle cargo with curcumin induces mitochondria-mediated apoptosis in breast cancer (MCF-7) cellsCited by: 30
Author(s): Lakshminarasimhan Harini, Sweta Srivastava, George Peter Gnanakumar, B. Karthikeyan, Cecil Ross, Vaithilingam Krishnakumar, V. Rajesh Kannan, Krishnan Sundar, Thandavarayan Kathiresan
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.27558
Quinacrine inhibits GSTA1 activity and induces apoptosis through G1/S arrest and generation of ROS in human non-small cell lung cancer cell linesCited by: 7
Author(s): M. Sriram Kumar, Ansie Martin, Snehal Nirgude, Bibha Chaudhary, Sukanta Mondal, Angshuman Sarkar
Software Mentions: 1
Published: about 6 years ago
10.1016/j.onehlt.2015.03.001
One health, multiple challenges: The inter-species transmission of influenza A virusCited by: 132
Author(s): Kirsty R. Short, Mathilde Richard, Josanne H. Verhagen, Debby van Riel, Eefje J. A. Schrauwen, Judith M. A. van den Brand, Benjamin Mänz, Rogier Bodewes, Sander Herfst
Software Mentions: 1
Published: over 10 years ago
10.1021/acs.jpcb.1c04779
Proline Isomerization Regulates the Phase Behavior of Elastin-Like Polypeptides in WaterCited by: 8
Author(s): Yani Zhao, Kurt Kremer
Software Mentions: 1
Published: almost 5 years ago
10.1113/JP272122
Murine startle mutant<i>Nmf11</i>affects the structural stability of the glycine receptor and increases deactivationCited by: 7
Author(s): Megan E. Wilkins, Alex Caley, Marc Gielen, Richard J. Harvey, Trevor G. Smart
Software Mentions: 1
Published: about 10 years ago
10.1113/JP279803
The startle disease mutation α1S270T predicts shortening of glycinergic synaptic currentsCited by: 2
Author(s): Zhiyi Wu, Remigijus Lape, Lea Jopp‐Saile, Benjamin O’Callaghan, Timo Greiner, Lucia G. Sivilotti
Software Mentions: 1
Published: about 6 years ago
10.1016/j.jprot.2013.03.005
Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkersCited by: 124
Author(s): Lutz Fischer, Zhuo A. Chen, Juri Rappsilber
Software Mentions: 1
Published: almost 13 years ago
10.1098/rsob.120071
Crystal structure of folliculin reveals a hidDENN function in genetically inherited renal cancerCited by: 97
Author(s): Ravi K. Nookala, Lars Langemeyer, A. Pacitto, Bernardo Ochoa‐Montaño, Jane C. Donaldson, Beata K. Blaszczyk, Dimitri Y. Chirgadze, Francis A. Barr, J. Fernando Bazán, Tom L. Blundell
Software Mentions: 1
Published: almost 14 years ago
10.1098/rsob.120136
On the molecular mechanisms of mitotic kinase activationCited by: 93
Author(s): Richard Bayliss, Andrew M. Fry, Tamanna Haq, Sharon Yeoh
Software Mentions: 1
Published: over 13 years ago
10.1098/rsob.110026
Structure and function of the transketolase from <i>Mycobacterium tuberculosis</i> and comparison with the human enzymeCited by: 34
Author(s): Elizabeth Fullam, F. Pojer, Terese Bergfors, T. Alwyn Jones, Stewart T. Cole
Software Mentions: 1
Published: over 14 years ago
10.1098/rsob.120016
Structure and function of FusB: an elongation factor G-binding fusidic acid resistance protein active in ribosomal translocation and recyclingCited by: 26
Author(s): Xiaohu Guo, Kristin Peisker, Kristina Bäckbro, Yang Chen, Ravi Kiran Koripella, Chandra Sekhar Mandava, Suparna Sanyal, M. Selmer
Software Mentions: 1
Published: over 14 years ago
10.1098/rsob.120015
Mice, men and the relatives: cross-species studies underpin innate immunityCited by: 72
Author(s): Clare E. Bryant, Tom P. Monie
Software Mentions: 1
Published: over 14 years ago
10.1098/rsob.130017
MHJ_0125 is an M42 glutamyl aminopeptidase that moonlights as a multifunctional adhesin on the surface of <i>Mycoplasma hyopneumoniae</i>Cited by: 52
Author(s): Mark W. Robinson, Kyle A. Buchtmann, Cheryl Jenkins, Jessica L. Tacchi, Benjamin B. A. Raymond, Joyce To, Piklu Roy Chowdhury, Lauren K. Woolley, Maurizio Labbate, Lynne Turnbull, Cynthia B. Whitchurch, Matthew P. Padula, Steven P. Djordjevic
Software Mentions: 1
Published: over 13 years ago
10.1098/rsob.130090
The basic keratin 10-binding domain of the virulence-associated pneumococcal serine-rich protein PsrP adopts a novel MSCRAMM foldCited by: 27
Author(s): Tim Schulte, Jonas Löfling, Cecilia Mikaelsson, Alexey Kikhney, Karina Hentrich, Aurora Diamante, Christine Ebel, Staffan Normark, Dmitri I. Svergun, Birgitta Henriques‐Normark, Adnane Achour
Software Mentions: 1
Published: over 12 years ago
10.1098/rsob.130142
Inter-ring rotations of AAA ATPase p97 revealed by electron cryomicroscopyCited by: 23
Author(s): Heidi O. Yeung, A. Förster, Cecilia Bebeacua, H. Niwa, Caroline A. Ewens, Ciaran Mckeown, Xiaodong Zhang, Paul S. Freemont
Software Mentions: 1
Published: over 12 years ago
10.1098/rsob.140121
Understanding the functional difference between growth arrest-specific protein 6 and protein S: an evolutionary approachCited by: 10
Author(s): Romain A. Studer, Frederik Opperdoes, Gerry A. F. Nicolaes, André B. Mulder, René Mulder
Software Mentions: 1
Published: almost 12 years ago
10.1073/pnas.1816161116
Divergent kinase regulates membrane ultrastructure of the <i>Toxoplasma</i> parasitophorous vacuoleCited by: 44
Author(s): Tsebaot Beraki, Xiaoyu Hu, Malgorzata Broncel, Joanna C. Young, William O’Shaughnessy, Dominika Borek, Moritz Treeck, Michael L. Reese
Software Mentions: 1
Published: over 7 years ago
10.1186/s12934-017-0737-2
Structure and application of antifreeze proteins from Antarctic bacteriaCited by: 62
Author(s): Patricio A. Muñoz, Sebastián Márquez, Fernando González‐Nilo, Valeria Márquez-Miranda, Jenny M. Blamey
Software Mentions: 1
Published: almost 9 years ago
10.1186/1475-2859-9-34
Isolation of an Escherichia coli K4 kfoC mutant over-producing capsular chondroitinCited by: 35
Author(s): Anna Zanfardino, Odile Francesca Restaino, Eugenio Notomista, Donatella Cimini, Chiara Schiraldi, Mario De Rosa, Maurilio De Felice, Mario Varcamonti
Software Mentions: 1
Published: about 16 years ago
10.1186/1475-2859-11-118
A dual tag system for facilitated detection of surface expressed proteins in Escherichia coliCited by: 18
Author(s): Johan Jarmander, Martin Gustavsson, Thi Huyen, Patrik Samuelson, Gen Larsson
Software Mentions: 1
Published: almost 14 years ago
10.1186/s12934-018-1024-6
Characterization of a novel N-acylhomoserine lactonase, AidP, from Antarctic Planococcus sp.Cited by: 18
Author(s): Wah-Seng See-Too, Peter Convey, David A. Pearce, Kok‐Gan Chan
Software Mentions: 1
Published: over 7 years ago
10.1186/s12934-018-0895-x
Use of chitin and chitosan to produce new chitooligosaccharides by chitinase Chit42: enzymatic activity and structural basis of protein specificityCited by: 55
Author(s): Peter Elias Kidibule, Paloma Santos‐Moriano, Elena Jiménez-Ortega, M. Ramirez-Escudero, M. Carmen Limón, Miguel Remacha, Francisco J. Plou, Julia Sanz‐Aparicio, María Fernández‐Lobato
Software Mentions: 1
Published: over 8 years ago
10.1099/mgen.0.000253
Sucrose 6F-phosphate phosphorylase: a novel insight in the human gut microbiomeCited by: 11
Author(s): Alexandra Tauzin, Laëtitia Bruel, Élisabeth Laville, Cendrine Nicoletti, David Navarro, Bernard Henrissat, Josette Perrier, Gabrielle Potocki-Véronèse, Thierry Giardina, Mickaël Lafond
Software Mentions: 1
Published: over 7 years ago
10.1186/2042-5783-1-12
Prediction of a novel RNA binding domain in crocodilepox Zimbabwe Gene 157Cited by: 1
Author(s): Nicole S. Little, Taylor T. H. Quon, Chris Upton
Software Mentions: 1
Published: over 14 years ago
10.1002/mbo3.210
O serotype‐independent susceptibility of <i>Pseudomonas aeruginosa</i> to lectin‐like pyocinsCited by: 17
Author(s): Maarten G. K. Ghequire, Jozef Dingemans, Jean‐Paul Pirnay, Daniël De Vos, Pierre Cornélis, René De Mot
Software Mentions: 1
Published: almost 12 years ago
10.1002/mbo3.339
Identification and functional analysis of a bacteriocin, pyocin S6, with ribonuclease activity from a <i>Pseudomonas aeruginosa</i> cystic fibrosis clinical isolateCited by: 27
Author(s): Jozef Dingemans, Maarten G. K. Ghequire, M. Craggs, René De Mot, Pierre Cornélis
Software Mentions: 1
Published: over 10 years ago
10.1002/mbo3.306
Molecular insights into the enzymatic diversity of flavin‐trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasmCited by: 22
Author(s): Ranjit K. Deka, Chad A. Brautigam, Wei Z. Liu, Diana R. Tomchick, Michael V. Norgard
Software Mentions: 1
Published: over 10 years ago
10.1002/mbo3.346
The HigB/HigA toxin/antitoxin system of <i>Pseudomonas aeruginosa</i> influences the virulence factors pyochelin, pyocyanin, and biofilm formationCited by: 79
Author(s): Thomas K. Wood, Thomas K. Wood
Software Mentions: 1
Published: over 10 years ago
10.1002/mbo3.243
Molecular basis for the recognition of cyclic‐di‐ <scp>AMP</scp> by PstA, a P <sub>II</sub> ‐like signal transduction proteinCited by: 38
Author(s): Philip Young-Ill Choi, Kamakshi Sureka, Joshua J. Woodward, Liang Tong
Software Mentions: 1
Published: over 11 years ago
10.1002/mbo3.366
Biochemical characterization of essential cell division proteins FtsX and FtsE that mediate peptidoglycan hydrolysis by PcsB in <i>Streptococcus pneumoniae</i>Cited by: 19
Author(s): Ruchika Bajaj, Kevin E. Bruce, Amy L. Davidson, Britta E. Rued, Cynthia V. Stauffacher, Malcolm E. Winkler
Software Mentions: 1
Published: about 10 years ago
10.3390/microorganisms8101594
Understanding High-Salt and Cold Adaptation of a Polyextremophilic EnzymeCited by: 24
Author(s): Ram Karan, Sam Mathew, Reyhan Muhammad, Didier B. Bautista, Malvina M. Vogler, Jörg Eppinger, Romina Oliva, Luigi Cavallo, Stefan T. Arold, Magnus Rueping
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms8101610
Detailed Molecular Interactions of Favipiravir with SARS-CoV-2, SARS-CoV, MERS-CoV, and Influenza Virus Polymerases In SilicoCited by: 26
Author(s): Mitsuru Sada, Takeshi Saraya, Haruyuki Ishii, Kaori Okayama, Yuriko Hayashi, Takeshi Tsugawa, Atsuyoshi Nishina, Koichi Murakami, Makoto Kuroda, Akihide Ryo, Hirokazu Kimura
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms9040837
Structural Insights into the Methane-Generating Enzyme from a Methoxydotrophic Methanogen Reveal a Restrained Gallery of Post-Translational ModificationsCited by: 9
Author(s): Julia M. Kurth, Marie-Caroline Müller, Cornelia U. Welte, T. Wagner
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms8050703
Strigolactone Analogs Are Promising Antiviral Agents for the Treatment of Human Cytomegalovirus InfectionCited by: 6
Author(s): Matteo Biolatti, Marco Blangetti, Giulia D’Arrigo, Francesca Spyrakis, Paola Cappello, Camilla Albano, Paolo Ravanini, Santo Landolfo, Marco De Andrea, Cristina Prandi, Valentina Dell’Oste
Software Mentions: 1
Published: about 6 years ago
10.3390/microorganisms8081250
Progress in Developing Inhibitors of SARS-CoV-2 3C-Like ProteaseCited by: 81
Author(s): Qingxin Li, CongBao Kang
Software Mentions: 1
Published: almost 6 years ago
10.3390/microorganisms9091936
Gene Analysis, Cloning, and Heterologous Expression of Protease from a Micromycete Aspergillus ochraceus Capable of Activating Protein C of Blood PlasmaCited by: 1
Author(s): С. К. Комаревцев, Peter Evseev, Mikhail M. Shneider, Е. А. Попова, Alexey E. Tupikin, В. Н. Степаненко, Мarsel R. Kabilov, С. В. Шабунин, A. A. Osmolovskiy, Konstantin A. Miroshnikov
Software Mentions: 1
Published: almost 5 years ago
10.3390/microorganisms8010059
Novel Sequence Feature of SecA Translocase Protein Unique to the Thermophilic Bacteria: Bioinformatics Analyses to Investigate Their Potential RolesCited by: 3
Author(s): Bijendra Khadka, Dhillon Persaud, Radhey S. Gupta
Software Mentions: 1
Published: over 6 years ago
10.3390/microorganisms9020293
Crossing the Wall: Characterization of the Multiheme Cytochromes Involved in the Extracellular Electron Transfer Pathway of Thermincola ferriaceticaCited by: 11
Author(s): M. Faustino, Bruno M. Fonseca, Nazua L. Costa, Diana Lousa, Ricardo O. Louro, Catarina M. Paquete
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms9051109
Amino Acid Residues Involved in Inhibition of Host Gene Expression by Influenza A/Brevig Mission/1/1918 PA-XCited by: 2
Author(s): Kevin Chiem, Luis Martinez‐Sobrido, Aitor Nogales, Marta L. DeDiego
Software Mentions: 1
Published: about 5 years ago
10.3390/microorganisms9061300
Pathogen Moonlighting Proteins: From Ancestral Key Metabolic Enzymes to Virulence FactorsCited by: 11
Author(s): Luís Franco-Serrano, David Sánchez-Redondo, Araceli Nájar-García, Sergio Hernández, Isaac Amela, Josep A. Pérez-Pons, Jaume Piñol, Angel Mozo-Villarías, Juan Cedano, Enrique Querol
Software Mentions: 1
Published: about 5 years ago
10.3390/microorganisms9010192
Identification of an Acidic Amino Acid Permease Involved in d-Aspartate Uptake in the Yeast Cryptococcus humicolaCited by: 2
Author(s): Daiki Imanishi, Yoshio Kera, Shouji Takahashi
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms7110515
Functional Characterization and Structural Analysis of NADH Oxidase Mutants from Thermus thermophilus HB27: Role of Residues 166, 174, and 194 in the Catalytic Properties and ThermostabilityCited by: 2
Author(s): Javier Rocha-Martín, Pedro A. Sánchez‐Murcia, Fernando López‐Gallego, Aurélio Hidalgo, José Berenguer
Software Mentions: 1
Published: over 6 years ago
10.3390/microorganisms9081645
Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin ModuleCited by: 4
Author(s): Tilman Schirmer, Tjaart de Beer, Stefanie Tamegger, Alexander Harms, Nikolaus Dietz, David M. Dranow, Thomas E. Edwards, Peter J. Myler, Isabelle Phan, Christoph Dehio
Software Mentions: 1
Published: almost 5 years ago
10.17912/micropub.biology.000322
A mutation that alters the 255th glutamate to lysine in RSKS-1/S6 kinase reliably extends the lifespan of C. elegans.Cited by: 0
Author(s): Jae Hyun Lee, Sieun S. Kim, Seung-Jae Lee
Software Mentions: 1
Published: over 5 years ago
10.1080/23802359.2019.1633963
Mitochondrial DNA analyses found five novel mutations in idiopathic epilepsy patientsCited by: 0
Author(s): Cuiping You, Rui Tao, Qiang Su, Yucheng Lu, Long Wang, Shu Liu, Lifen Wang, Limin Wang, Fuzhong Xue, Fengyuan Che
Software Mentions: 1
Published: about 7 years ago
10.1186/s13100-021-00240-4
The unusual structure of the PiggyMac cysteine-rich domain reveals zinc finger diversity in PiggyBac-related transposasesCited by: 5
Author(s): Marc Guérineau, Luíza Mamigonian Bessa, Séverine Moriau, Ewen Lescop, François Bontems, Nathalie Mathy, E. Guittet, Julien Bischerour, Mireille Bétermier, Nelly Morellet
Software Mentions: 1
Published: about 5 years ago
10.1038/s41379-019-0372-z
Mapping the binding sites of antibodies utilized in programmed cell death ligand-1 predictive immunohistochemical assays for use with immuno-oncology therapiesCited by: 56
Author(s): Nicola Lawson, Carly I Dix, Paul Scorer, Christopher J. Stubbs, Edmond Wong, Liam Hutchinson, Eileen McCall, M. Schimpl, Emma DeVries, Jill Walker, Gareth Williams, James Hunt, Craig Barker
Software Mentions: 1
Published: over 6 years ago
10.1016/j.mam.2012.12.009
The ABCs of membrane transporters in health and disease (SLC series): IntroductionCited by: 457
Author(s): Matthias A. Hediger, Benjamin Clémençon, Robert E. Burrier, Elspeth A. Bruford
Software Mentions: 1
Published: over 13 years ago
10.1186/s13229-019-0286-0
Disruption of PHF21A causes syndromic intellectual disability with craniofacial anomalies, epilepsy, hypotonia, and neurobehavioral problems including autismCited by: 26
Author(s): Hyung Goo Kim, Jill A. Rosenfeld, Daryl A. Scott, Gerard Bénédicte, Jonathan D J Labonne, Juliette Brown, Marianne McGuire, Sonal Mahida, Sakkubai Naidu, Jacqueline Gutierrez, Gaëtan Lesca, Vincent Des Portes, Ange Line Bruel, Arthur Sorlin, Fan Xia, Yline Capri, Eric A. Muller, Dianalee McKnight, Erin Torti, Franz Rüschendorf, Oliver Hummel, Zeyaul Islam, Prasanna R. Kolatkar, Lawrence C. Layman, Dongseok Ryu, Il Keun Kong, Suneeta Madan‐Khetarpal, Cheol-Hee Kim
Software Mentions: 1
Published: over 6 years ago
10.1016/j.molbiopara.2009.12.011
Structure of Trypanosoma brucei glutathione synthetase: Domain and loop alterations in the catalytic cycle of a highly conserved enzymeCited by: 13
Author(s): Paul K. Fyfe, M.S. Alphey, William N. Hunter
Software Mentions: 1
Published: over 16 years ago
10.1093/molbev/msw061
Are There Rab GTPases in Archaea?Cited by: 22
Author(s): Jarosław Surkont, José B. Pereira-Leal
Software Mentions: 1
Published: over 10 years ago
10.1093/molbev/msy094
Demographic History and Genetic Adaptation in the Himalayan Region Inferred from Genome-Wide SNP Genotypes of 49 PopulationsCited by: 34
Author(s): Elena Arciero, Thirsa Kraaijenbrink, Asan, Marc Haber, Massimo Mezzavilla, Qasim Ayub, Wei Wang, Zhaxi Pingcuo, Huanming Yang, Jian Wang, Mark A. Jobling, George van Driem, Yali Xue, Peter de Knijff, Chris Tyler‐Smith
Software Mentions: 1
Published: about 8 years ago
10.1186/s43556-020-00001-4
Structural characterization of the C-terminal domain of SARS-CoV-2 nucleocapsid proteinCited by: 67
Author(s): Renjie Zhou, Rui Zeng, Albrecht von Brunn, Jian Lei
Software Mentions: 1
Published: almost 6 years ago
10.1186/s43556-020-00005-0
Structural basis for the multimerization of nonstructural protein nsp9 from SARS-CoV-2Cited by: 20
Author(s): Changhui Zhang, Yiping Chen, Li Li, Yan Yang, Jun He, Cheng Chen, Dan Su
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13041-017-0287-x
TBK1: a new player in ALS linking autophagy and neuroinflammationCited by: 207
Author(s): James A Oakes, Maria C. Davies, Mark O. Collins
Software Mentions: 1
Published: over 9 years ago
10.1186/s12943-019-1112-1
The PI3K subunits, P110α and P110β are potential targets for overcoming P-gp and BCRP-mediated MDR in cancerCited by: 68
Author(s): Lei Zhang, Yidong Li, Qianchao Wang, Zhuo Chen, Xiaoyun Li, Zhuo‐Xun Wu, Chaohua Hu, Dan Liao, Wei Zhang, Zhe‐Sheng Chen
Software Mentions: 1
Published: over 6 years ago
10.1186/1476-4598-9-173
Identification and characterization of retinoblastoma gene mutations disturbing apoptosis in human breast cancersCited by: 28
Author(s): Elisabet Ognedal Berge, Stian Knappskog, Stephanie Geisler, Vidar Staalesen, Marec Pacal, Anne‐Lise Børresen‐Dale, Pål Puntervoll, Johan R. Lillehaug, Per Eystein Lønning
Software Mentions: 1
Published: about 16 years ago
10.1186/s12943-020-01192-8
Disruption of the RNA modifications that target the ribosome translation machinery in human cancerCited by: 29
Author(s): Maxime Janin, Laia Coll-SanMartin, Manel Esteller
Software Mentions: 1
Published: over 6 years ago
10.1186/s12943-015-0362-9
FL118, a novel camptothecin derivative, is insensitive to ABCG2 expression and shows improved efficacy in comparison with irinotecan in colon and lung cancer models with ABCG2-induced resistanceCited by: 47
Author(s): David Westover, Xiang Ling, Hong Lam, Jacob Welch, Chunyang Jin, Céline Gongora, Maguy Del Rio, Mansukh C. Wani, Fengzhi Li
Software Mentions: 1
Published: about 11 years ago
10.1186/1476-4598-9-28
An evolved ribosome-inactivating protein targets and kills human melanoma cells in vitro and in vivoCited by: 15
Author(s): Melissa Cheung, Leigh Revers, Subodini Perampalam, Xin Wei, Reza Kiarash, David E. Green, Aws Abdul-Wahid, Jean Gariépy
Software Mentions: 1
Published: over 16 years ago
10.1016/j.molcel.2020.09.024
Cancer-Associated Gain-of-Function Mutations Activate a SWI/SNF-Family Regulatory HubCited by: 16
Author(s): Cedric R. Clapier, Naveen Verma, Timothy J. Parnell, Bradley R. Cairns
Software Mentions: 1
Published: over 5 years ago
10.1016/j.molcel.2014.12.015
Structure and Assembly Pathway of the Ribosome Quality Control ComplexCited by: 156
Author(s): Sichen Shao, Alan Brown, S. Balaji, Ramanujan S. Hegde
Software Mentions: 1
Published: over 11 years ago
10.1016/j.molcel.2008.02.023
Architecture of a Serine Recombinase-DNA Regulatory ComplexCited by: 52
Author(s): Kent W. Mouw, Sally‐J. Rowland, Mark Gajjar, Martin R. Boocock, W. Marshall Stark, Phoebe A. Rice
Software Mentions: 1
Published: over 18 years ago
10.1016/j.molcel.2009.07.027
A Method for Genetically Installing Site-Specific Acetylation in Recombinant Histones Defines the Effects of H3 K56 AcetylationCited by: 437
Author(s): Heinz Neumann, Susan M. Hancock, Ruth Buning, Andrew Routh, Lynda Chapman, Joanna Somers, Tom Owen-Hughes, John van Noort, Daniela Rhodes, Jason W. Chin
Software Mentions: 1
Published: almost 17 years ago
10.1016/j.molcel.2019.03.037
Structural Basis of an Asymmetric Condensin ATPase CycleCited by: 63
Author(s): Markus Hassler, Indra A. Shaltiël, Marc Kschonsak, Bernd Simon, Fabian Merkel, Lena Thärichen, H. Bailey, Jakub Macošek, Sol Bravo, J Metz, Janosch Hennig, Christian H. Haering
Software Mentions: 1
Published: about 7 years ago
10.1016/j.molcel.2015.06.033
Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation ComplexCited by: 192
Author(s): J.L. Llácer, Tanweer Hussain, Laura E. Marler, Colin Echeverría Aitken, Anil Thakur, Jon R. Lorsch, Alan G. Hinnebusch, V. Ramakrishnan
Software Mentions: 1
Published: almost 11 years ago
10.1007/s11010-016-2892-x
Benzimidazole inhibitors of protein kinase CK2 potently inhibit the activity of atypical protein kinase Rio1Cited by: 17
Author(s): Konrad Kubiński, Maciej Masłyk, Andrzej Orzeszko
Software Mentions: 1
Published: over 9 years ago
10.1074/mcp.RA120.002414
The Mechanism of NEDD8 Activation of CUL5 Ubiquitin E3 LigasesCited by: 9
Author(s): Ryan Lumpkin, Alla Ahmad, Rachel Blake, Christopher J. Condon, Elizabeth A. Komives
Software Mentions: 1
Published: over 5 years ago