10.1038/s41598-018-25630-2

The trimeric solution structure and fucose-binding mechanism of the core fucosylation-specific lectin PhoSL
Cited by: 11
Author(s): Kazuhiko Yamasaki, Tomoko Yamasaki, Hiroaki Tateno
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-23554-5

Identification of an Arg-Leu-Arg tripeptide that contributes to the binding interface between the cytokine MIF and the chemokine receptor CXCR4
Cited by: 41
Author(s): Michael Lacy, Christos K. Kontos, Markus Brandhofer, Kathleen Hille, Sabine Gröning, Dzmitry Sinitski, Priscila Bourilhon, Eric Rosenberg, Christine Krammer, Tharshika Thavayogarajah, Georgios Pantouris, Maria Bakou, Christian Weber, Elias Lolis, Juergen Bernhagen, Aphrodite Kapurniotu
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-26832-4

Molecular recognition of RAS/RAF complex at the membrane: Role of RAF cysteine-rich domain
Cited by: 68
Author(s): Timothy Travers, César A. López, Que N. Van, Chris Neale, Marco Tonelli, Andrew Stephen, S. Gnanakaran
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-26800-y

Molecular basis for dengue virus broad cross-neutralization by humanized monoclonal antibody 513
Cited by: 14
Author(s): Yee Hwa Wong, Akshita Kumar, Chong Wai Liew, Kannan Tharakaraman, Srinivasaraghavan Kannan, Ram Sasisekharan, Chandra Verma, Julien Lescar
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-27089-7

NCAM2 Fibronectin type-III domains form a rigid structure that binds and activates the Fibroblast Growth Factor Receptor
Cited by: 15
Author(s): Kim Krighaar Rasmussen, Maria Hansen Falkesgaard, Malene Winther, Nikolaj Kulahin Roed, Christine Louise Quistgaard, Marie Nygaard Teisen, Sofie Edslev, David L. Petersen, Ali Aljubouri, Christa Lykke Christensen, Peter W. Thulstrup, Leila Lo Leggio, Kaare Teilum, Peter S. Walmod
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-021-87845-0

Potent sialic acid inhibitors that target influenza A virus hemagglutinin
Cited by: 8
Author(s): Yu-Jen Chang, Cheng-Yun Yeh, Ju‐Chien Cheng, Yuqi Huang, Kai‐Cheng Hsu, Yu‐Feng Lin, Chih-Hao Lu
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-88708-4

A novel framework for engineering protein loops exploring length and compositional variation
Cited by: 6
Author(s): Pedro A. G. Tizei, Emma Harris, Shamal Withanage, Marleen Renders, Vitor B. Pinheiro
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-88150-6

A survey of the kinome pharmacopeia reveals multiple scaffolds and targets for the development of novel anthelmintics
Cited by: 5
Author(s): Jessica Knox, Nicolas Joly, Edmond M. Linossi, José A. Carmona‐Negrón, Natalia Jura, Lionel Pintard, William J. Zuercher, Peter J. Roy
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-88399-x

Allostery of atypical modulators at oligomeric G protein-coupled receptors
Cited by: 1
Author(s): Rabindra V. Shivnaraine, Brendan Kelly, Gwendolynne Elmslie, Xi Ping Huang, Yue Dong, Margaret Seidenberg, James W. Wells, John E. Ellis
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-88957-3

Cortisol modulates calcium release-activated calcium channel gating in fish hepatocytes
Cited by: 6
Author(s): Chinmayee Das, Manoj Kumar Rout, Willem C. Wildering, Mathilakath M. Vijayan
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-89196-2

Structural insight into Pichia pastoris fatty acid synthase
Cited by: 8
Author(s): Joseph S. Snowden, Jehad Alzahrani, Lee Sherry, Martin Stacey, David J. Rowlands, Neil A. Ranson, Nicola J. Stonehouse
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-89485-w

Structure and antimicrobial activity of NCR169, a nodule-specific cysteine-rich peptide of Medicago truncatula
Cited by: 12
Author(s): Noriyoshi Isozumi, Yuya Masubuchi, Toru Imamura, Masashi Mori, Hironori Koga, Shinya Ohki
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-89600-x

A metallo-β-lactamase enzyme for internal detoxification of the antibiotic thienamycin
Cited by: 7
Author(s): Seydina M. Diène, Lucile Pinault, Sophie Alexandra Baron, Saı̈d Azza, Nicholas Armstrong, Linda Hadjadj, Éric Chabrière, Jean‐Marc Rolain, Pierre Pontarotti, Didier Raoult
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-89557-x

Molecular docking analysis and evaluation of the antibacterial and antioxidant activities of the constituents of Ocimum cufodontii
Cited by: 17
Author(s): Muhdin Aliye, Aman Dekebo, Hailemichael Tesso, Teshome Abdo, Rajalakshmanan Eswaramoorthy, Yadessa Melaku
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-89421-y

Functional display of bioactive peptides on the vGFP scaffold
Cited by: 2
Author(s): Sharon Chee, Jantana Wongsantichon, Lau Sze Yi, Barindra Sana, Yuri Frosi, Robert Robinson, Farid J. Ghadessy
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-89621-6

Exploring antibody repurposing for COVID-19: beyond presumed roles of therapeutic antibodies
Cited by: 9
Author(s): Puneet Rawat, Divya Sharma, Ambuj Srivastava, Janakiraman Vani, M. Michael Gromiha
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-90001-3

Identification of targets of JS-K against HBV-positive human hepatocellular carcinoma HepG2.2.15 cells with iTRAQ proteomics
Cited by: 5
Author(s): Zhengyun Liu, Yan Xu, Wanling Zhang, Xinghong Gao, Gaoxing Luo, Samuel L. Hong, Jie Liu, Huan Wang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-91287-z

Evolution of KIPPIS as a versatile platform for evaluating intracellularly functional peptide aptamers
Cited by: 2
Author(s): Daiki Kashima, Masahiro Kawahara
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-91165-8

In vitro assessment and phase I randomized clinical trial of anfibatide a snake venom derived anti-thrombotic agent targeting human platelet GPIbα
Cited by: 17
Author(s): Benjamin Xiaoyi Li, Xiangrong Dai, Xinyu Xu, Reheman Adili, Miguel A. D. Neves, Lei Xi, Chuanbin Shen, Guanbao Zhu, Yiming Wang, Hui Zhou, Yufei Hou, Tiffany Ni, Yfke Pasman, Zhongqiang Yang, Fang Qian, Yue Zhao, Yongxiang Gao, Jing Liu, Maikun Teng, Alexandra H. Marshall, Eric G. Cerenzia, Mandy Lokyee Li, Heyu Ni
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-91204-4

An in vivo selection system with tightly regulated gene expression enables directed evolution of highly efficient enzymes
Cited by: 2
Author(s): Parinthon Nearmnala, Manutsawee Thanaburakorn, Watanalai Panbangred, Pimchai Chaiyen, Narupat Hongdilokkul
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-91461-3

Extracellular mutation induces an allosteric effect across the membrane and hampers the activity of MRP1 (ABCC1)
Cited by: 2
Author(s): Yuval Bin Kanner, Assaf Ganoth, Yossi Tsfadia
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-91693-3

Phylogenetic comparison and splice site conservation of eukaryotic U1 snRNP-specific U1-70K gene family
Cited by: 4
Author(s): Tao Fan, Yuzhen Zhao, Jing‐Fang Yang, Qinlai Liu, Yuan Tian, Debatosh Das, Yinggao Liu, Jianhua Zhang, Chen Chen, Moxian Chen, Shiwei Zhou
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92198-9

Human intelectin-1 (ITLN1) genetic variation and intestinal expression
Cited by: 12
Author(s): Eric B. Nonnecke, Patricia Castillo, Amanda Dugan, Faisal Almalki, Mark A. Underwood, Carol A. de la Motte, Weirong Yuan, Wuyuan Lu, Bo Shen, Malin Johansson, Laura L. Kiessling, Edward J. Hollox, Bo Lönnerdal, Charles L. Bevins
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92365-y

An ultra-wide scanner for large-area high-speed atomic force microscopy with megapixel resolution
Cited by: 17
Author(s): Arin Marchesi, Kenichi Umeda, Takumi Komekawa, Takeru Matsubara, Holger Flechsig, Toshio Ando, Shinji Watanabe, Noriyuki Kodera, Clemens M. Franz
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92416-4

Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19
Cited by: 22
Author(s): Martin Redhead, C.D. Owen, Lennart Brewitz, Amelia H. Collette, P. Lukacik, Claire Strain-Damerell, Stephen K. Robinson, P. Collins, Philipp Schäfer, Mark B. Swindells, Chris J. Radoux, Iva Navratilova Hopkins, D. Fearon, A. Douangamath, F. von Delft, Tika R. Malla, Laura Vangeel, Thomas Vercruysse, Hendrik Jan Thibaut, Pieter Leyssen, Tu Nguyen, Mitchell V. Hull, Anthony Tumber, David J. Hallett, Christopher J. Schofield, D.I. Stuart, Andrew L. Hopkins, M.A. Walsh
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-91747-6

Acyclic nucleoside phosphonates with adenine nucleobase inhibit Trypanosoma brucei adenine phosphoribosyltransferase in vitro
Cited by: 7
Author(s): Eva Doleželová, Tomáš Klejch, Petr Špaček, Martina Slapničková, Luke W. Guddat, Dana Hocková, Alena Zı́ková
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92466-8

Cell wall integrity is compromised under temperature stress in Schizosaccharomyces pombe expressing a valproic acid-sensitive vas4 mutant
Cited by: 0
Author(s): Sen Qiao, Xiaofang Luo, Hui Wang, Yue Fang, Lili Zhang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92793-w

The structure-based cancer-related single amino acid variation prediction
Cited by: 5
Author(s): Jiajun Liu, Chao Yu, Hsiao-Wei Wu, Yu-Jen Chang, Chih‐Peng Lin, Chih-Hao Lu
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93063-5

Identification of new GLUT2-selective inhibitors through in silico ligand screening and validation in eukaryotic expression systems
Cited by: 11
Author(s): Sina Schmidl, Oleg Ursu, Cristina V. Iancu, Mislav Oreb, Tudor I. Oprea, Juhui Choe
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93562-5

Calmodulin-dependent KCNE4 dimerization controls membrane targeting
Cited by: 3
Author(s): Sara R. Roig, Laura Solé, Silvia Cassinelli, Magalí Colomer-Molera, Daniel Sastre, Clara Serrano-Novillo, Antonio Serrano-Albarrás, M. Pilar Lillo, Michael M. Tamkun, Antônio Felipe
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93419-x

Identification of V6.51L as a selectivity hotspot in stereoselective A2B adenosine receptor antagonist recognition
Cited by: 8
Author(s): Xuesong Wang, Willem Jespers, Rubén Prieto-Díaz, María Majellaro, Adriaan P. IJzerman, Gerard J. P. van Westen, Eddy Sotelo, Laura H. Heitman, Hugo Gutiérrez‐de‐Terán
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94561-2

Identification and physical characterization of a spontaneous mutation of the tobacco mosaic virus in the laboratory environment
Cited by: 4
Author(s): Jenica L. Lumata, Darby Ball, Arezoo Shahrivarkevishahi, Michael A. Luzuriaga, Fabian C. Herbert, Olivia Brohlin, Hamilton Lee, Laurel M. Hagge, Sheena D’Arcy, Jeremiah J. Gassensmith
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-92176-1

Designing a multi-epitope vaccine candidate to combat MERS-CoV by employing an immunoinformatics approach
Cited by: 34
Author(s): Shafi Mahmud, Md. Oliullah Rafi, Gobindo Kumar Paul, Maria Meha Promi, Mst. Sharmin Sultana Shimu, Suvro Biswas, Talha Bin Emran, Kuldeep Dhama, Salem A. Alyami, Mohammad Ali Moni, Abu Saleh
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95044-0

Boron rich nanotube drug carrier system is suited for boron neutron capture therapy
Cited by: 5
Author(s): Fabian Heide, Matthew McDougall, Candice Harder-Viddal, R. M. Roshko, David E. Davidson, Jiandong Wu, Camila Aprosoff, Aniel Moya‐Torres, Francis Lin, Jörg Stetefeld
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-94809-x

Identification of non-classical hCA XII inhibitors using combination of computational approaches for drug design and discovery
Cited by: 4
Author(s): Mohammad M. Al‐Sanea, Garri Chilingaryan, Narek Abelyan, Grigor Arakelov, Harutyun Sahakyan, Vahram Arakelov, Karen Nazaryan, Shaimaa Hussein, Gharam M. Alazmi, Haifa E. Alsharari, Waad M. Al-faraj, Faten S. Alruwaili, Nouf Q. Albilasi, Tahani S. Alsharari, Abdulaziz A. S. Alsaleh, Turki M. Alazmi, Atiah H. Almalki, Nasser Hadal Alotaibi, Mohamed A. Abdelgawad
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-94401-3

Tracking oxidation-induced alterations in fibrin clot formation by NMR-based methods
Cited by: 5
Author(s): Wai-Hoe Lau, Nathan White, Tseng-Tsai Yeo, Russell L. Gruen, Konstantin Pervushin
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95618-y

Pathogenic nsSNPs that increase the risks of cancers among the Orang Asli and Malays
Cited by: 5
Author(s): Nurul Ain Khoruddin, Mohd NurFakhruzzaman Noorizhab, Lay Kek Teh, Farida Zuraina Mohd Yusof, Mohd Zaki Salleh
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95008-4

Biochemical and structural studies of target lectin SapL1 from the emerging opportunistic microfungus Scedosporium apiospermum
Cited by: 4
Author(s): Dania Martínez-Alarcón, Viviane Balloy, Jean‐Philippe Bouchara, Roland J. Pieters, A. Varrot
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-95920-9

A peptide-based anti-Adalimumab antibody assay to monitor immune response to biologics treatment in juvenile idiopathic arthritis and childhood chronic non-infectious uveitis
Cited by: 2
Author(s): Hendrik Rusche, Edoardo Marrani, Feliciana Real‐Fernández, Roberta Ponti, Francesco Terzani, Ilaria Maccora, Olivier Monasson, Maria Vincenza Mastrolia, Elisa Peroni, Ilaria Pagnini, Rolando Cimaz, Anna Maria Papini, Gabriele Simonini, Paolo Rovero
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-96931-2

2-Carba-lysophosphatidic acid is a novel β-lysophosphatidic acid analogue with high potential for lysophosphatidic acid receptor activation and autotaxin inhibition
Cited by: 7
Author(s): Keiko Fukasawa, Mari Gotoh, Akiharu Uwamizu, Takatsugu Hirokawa, Masaki Ishikawa, Yasuhiko Shimizu, Shinji Yamamoto, Kenji Iwasa, Ken Yoshikawa, Junken Aoki, Kimiko Murakami‐Murofushi
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-96659-z

Characterization of a novel multidomain CE15-GH8 enzyme encoded by a polysaccharide utilization locus in the human gut bacterium Bacteroides eggerthii
Cited by: 7
Author(s): Cathleen Kmezik, Daniel Krska, Scott Mazurkewich, Johan Larsbrink
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98314-z

Association of the malate dehydrogenase-citrate synthase metabolon is modulated by intermediates of the Krebs tricarboxylic acid cycle
Cited by: 7
Author(s): Joy Omini, Izabela Wojciechowska, Aleksandra Skirycz, Hideaki Moriyama, Toshihiro Obata
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98419-5

Structural basis of human PDZD8–Rab7 interaction for the ER-late endosome tethering
Cited by: 11
Author(s): Haider Ali Khan, Lin Chen, Lingchen Tan, Young Jun Im
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98357-2

Genetic analysis by targeted next-generation sequencing and novel variation identification of maple syrup urine disease in Chinese Han population
Cited by: 1
Author(s): Xiaohua Fang, Xuejun Zhu, Feng Yin, Ying Bai, Xuechao Zhao, Liu Ning, Xiangdong Kong
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98790-3

Redox status of cysteines does not alter functional properties of human dUTPase but the Y54C mutation involved in monogenic diabetes decreases protein stability
Cited by: 0
Author(s): J. Szabó, Kinga Nyíri, Dániel Andrási, Judit Matejka, Olivér Ozohanics, Beáta G. Vértessy
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-99357-y

Increased survival in puppies affected by Canine Parvovirus type II using an immunomodulator as a therapeutic aid
Cited by: 7
Author(s): Adriana I Muñoz, Luis Vallejo‐Castillo, Ana L Fragozo, Said Vázquez‐Leyva, Lenin Pavón, Gilberto Pérez‐Sánchez, Rodolfo Soria-Castro, Gabriela Mellado-Sánchez, Laura Cobos-Marín, Sonia Mayra Pérez‐Tapia
Software Mentions: 1
Published: almost 5 years ago

10.1126/scisignal.abh2071

Mn ²⁺ coordinates Cap-0-RNA to align substrates for efficient 2′- <i>O</i> -methyl transfer by SARS-CoV-2 nsp16
Cited by: 12
Author(s): G. Minasov, Mónica Rosas‐Lemus, L. Shuvalova, Nicole L. Inniss, J.S. Brunzelle, Courtney M. Daczkowski, Paul Hoover, Andrew D. Mesecar, K.J.F. Satchell
Software Mentions: 1
Published: about 5 years ago

10.1126/science.abf1611

SARS-CoV-2 M ^pro inhibitors with antiviral activity in a transgenic mouse model
Cited by: 298
Author(s): Juan Qiao, Yueshan Li, Rui Zeng, Feng-Liang Liu, Rong-Hua Luo, Chong Huang, Yifei Wang, Jie Zhang, Baoxue Quan, Chaoyong Shen, Xin Mao, Xinlei Liu, Wenhao Sun, Wei Yang, Xincheng Ni, Kai Wang, Ling Xu, Zhenhao Duan, Qing-Cui Zou, Hailin Zhang, Qu Wang, Yanghaopeng Long, Minghua Li, Ruicheng Yang, Jianxin You, Yangli Zhou, Rui Yao, Wenpei Li, Jingming Liu, Pei Chen, Yang Liu, Guifeng Lin, Xin Yang, Jun Zou, Linli Li, Yiguo Hu, Guangwen Lu, Yuquan Wei, Yong‐Tang Zheng, Jian Lei, Shengyong Yang
Software Mentions: 1
Published: over 5 years ago

10.1100/2012/165258

Docking Studies, Synthesis, Characterization and Evaluation of Their Antioxidant and Cytotoxic Activities of Some Novel Isoxazole-Substituted 9-Anilinoacridine Derivatives
Cited by: 26
Author(s): Kalirajan Rajagopal, M. H. Mohammed Rafick, S. Sankar, Jubie Selvaraj
Software Mentions: 1
Published: over 14 years ago

10.1100/2012/738423

Computational Methods to Work as First-Pass Filter in Deleterious SNP Analysis of Alkaptonuria
Cited by: 11
Author(s): R. Magesh, George Priya Doss C
Software Mentions: 1
Published: over 14 years ago

10.1155/2013/305081

Studies of the Interaction between Isoimperatorin and Human Serum Albumin by Multispectroscopic Method: Identification of Possible Binding Site of the Compound Using Esterase Activity of the Protein
Cited by: 37
Author(s): Samira Ranjbar, Yalda Shokoohinia, Sirous Ghobadi, Nooshin Bijari, Sakineh Gholamzadeh, Nastaran Moradi, Mohammad Reza Ashrafi-Kooshk, Abbas Aghaei, Reza Khodarahmi
Software Mentions: 1
Published: over 13 years ago

10.1155/2014/536084

Effects of Water Models on Binding Affinity: Evidence from All-Atom Simulation of Binding of Tamiflu to A/H5N1 Neuraminidase
Cited by: 33
Author(s): Thanh Tuan Nguyen, Viet Hoang Man, Mai Suan Li
Software Mentions: 1
Published: over 12 years ago

10.1155/2015/740815

Discovery of Specific Inhibitors for Intestinal<i>E. coli</i> <i>β</i>-Glucuronidase through<i>In Silico</i>Virtual Screening
Cited by: 11
Author(s): Tian‐Lu Cheng, Kai‐Hsiang Chuang, Steve R. Roffler, Kai-Wen Cheng, Yu Lin Leu, Chih Hung Chuang, Chien Chaio Huang, Chien-Han Kao, Yuan-Chin Hsieh, Long Chang, Chen Tian, Chien Shu Chen
Software Mentions: 1
Published: over 11 years ago

10.1155/2021/6642626

Predicting the Most Deleterious Missense Nonsynonymous Single-Nucleotide Polymorphisms of Hennekam Syndrome-Causing CCBE1 Gene, In Silico Analysis
Cited by: 7
Author(s): Khyber Shinwari, Guojun Liu, S. S. Deryabina, Mikhail A. Bolkov, Irina A. Tuzankina, V. А. Chereshnev
Software Mentions: 1
Published: about 5 years ago

10.1155/2014/970315

Human Interferon Alpha-2b: A Therapeutic Protein for Cancer Treatment
Cited by: 68
Author(s): Ratih Asmana Ningrum
Software Mentions: 1
Published: over 12 years ago

10.3390/s140713285

Strategy for Making a Superior Quenchbody to Proteins: Effect of the Fluorophore Position
Cited by: 16
Author(s): Hee Jin Jeong, Hiroshi Ueda
Software Mentions: 1
Published: almost 12 years ago

10.3390/s19224852

Determination of Picomolar Concentrations of Paraoxon in Human Urine by Fluorescence-Based Enzymatic Assay
Cited by: 12
Author(s): Giovanni Paolo Cetrangolo, Carla Gori, Jānis Ruško, Sara Terreri, Giuseppe Manco, Amelia Cimmino, Ferdinando Febbraio
Software Mentions: 1
Published: over 6 years ago

10.3390/s20030598

Molecular Dissection of dH3w, A Fluorescent Peptidyl Sensor for Zinc and Mercury
Cited by: 2
Author(s): Marialuisa Siepi, Rosario Oliva, Filomena Battista, Luigi Petraccone, Pompea Del Vecchio, Viviana Izzo, Fabrizio Dal Piaz, Rachele Isticato, Eugenio Notomista, Giuliana Donadio
Software Mentions: 1
Published: over 6 years ago

10.3390/s20123501

Spectral Characteristics and Sensor Ability of a New 1,8-Naphthalimide and Its Copolymer with Styrene
Cited by: 3
Author(s): Desislava Staneva, Silvia Angelova, Ivo Grabchev
Software Mentions: 1
Published: about 6 years ago

10.1038/s41392-019-0057-6

Genome-wide identification of DNA-PKcs-associated RNAs by RIP-Seq
Cited by: 15
Author(s): Zhiquan Song, Yufeng Xie, Zongpei Guo, Han Yang, Hua Guan, Xiaodan Liu, Teng Ma, Ping‐Kun Zhou
Software Mentions: 1
Published: about 7 years ago

10.1038/s41392-020-00365-7

SARS-CoV-2 spike behavior in situ: a Cryo-EM images for a better understanding of the COVID-19 pandemic
Cited by: 16
Author(s): Alaa M. Ismail, Abdo A. Elfiky
Software Mentions: 1
Published: over 5 years ago

10.1038/s41392-021-00649-6

Identification of SARS-CoV-2-against aptamer with high neutralization activity by blocking the RBD domain of spike protein 1
Cited by: 51
Author(s): Ge Yang, Ziyue Li, Mohammed Irfan, Liping Zhao, Wei Wei, Haihua Xiao, Weisheng Guo, Yongxiang Zhao, Feng Qu, Yuanyu Huang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41392-021-00756-4

S19W, T27W, and N330Y mutations in ACE2 enhance SARS-CoV-2 S-RBD binding toward both wild-type and antibody-resistant viruses and its molecular basis
Cited by: 21
Author(s): Fei Ye, Xi Lin, Zimin Chen, Fulun Yang, Sheng Lin, Jing Yang, Hua Chen, Honglu Sun, Lingling Wang, Ao Wen, Xindan Zhang, Yushan Dai, Yu Cao, Jingyun Yang, Guobo Shen, Li Yang, Jiong Li, Zhenling Wang, Wei Wang, Xiawei Wei, Guangwen Lu
Software Mentions: 1
Published: almost 5 years ago

10.1186/2044-5040-4-11

Kelch proteins: emerging roles in skeletal muscle development and diseases
Cited by: 120
Author(s): Vandana Gupta, Alan H. Beggs
Software Mentions: 1
Published: over 12 years ago

10.1186/s13395-020-00241-6

Drosophila myosin mutants model the disparate severity of type 1 and type 2B distal arthrogryposis and indicate an enhanced actin affinity mechanism
Cited by: 4
Author(s): Yanjuan Guo, William A. Kronert, Karen H. Hsu, Alice H. Huang, Floyd Sarsoza, Kaylyn M. Bell, Jennifer A. Suggs, Douglas M. Swank, Sanford I. Bernstein
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13029-015-0037-3

Molecular-docking study of malaria drug target enzyme transketolase in Plasmodium falciparum 3D7 portends the novel approach to its treatment
Cited by: 31
Author(s): Md. Anayet Hasan, Md. Habibul Hasan Mazumder, Arshad Chowdhury, Amit Datta, Mukhtar A. Khan
Software Mentions: 1
Published: about 11 years ago

10.1186/s40064-016-1794-4

Metabolic inhibition of meloxicam by specific CYP2C9 inhibitors in Cunninghamella blakesleeana NCIM 687: in silico and in vitro studies
Cited by: 6
Author(s): G. Shyam Prasad, K. Srisailam, R.B. Sashidhar
Software Mentions: 1
Published: over 10 years ago

10.1186/s40064-016-2752-x

Binding interaction of a gamma-aminobutyric acid derivative with serum albumin: an insight by fluorescence and molecular modeling analysis
Cited by: 21
Author(s): Samir Kumar Pal, Sumit Kumar Pramanik, Baisali Bhattacharya, Biswadip Banerji, Nakul C. Maiti
Software Mentions: 1
Published: almost 10 years ago

10.1155/2015/346714

HLA-E: Presentation of a Broader Peptide Repertoire Impacts the Cellular Immune Response—Implications on HSCT Outcome
Cited by: 48
Author(s): Thomas Kraemer, Alexander A. Celik, Trevor Huyton, Heike Kunze‐Schumacher, Rainer Blasczyk, Christina Bade‐Doeding
Software Mentions: 1
Published: over 11 years ago

10.1155/2017/8596135

The DEAD-Box RNA Helicase DDX3 Interacts with m⁶A RNA Demethylase ALKBH5
Cited by: 51
Author(s): Abdullah Shah, Robina Farooq, Hassaan Mehboob Awan, Shanshan Hu, Xiaolin Wang, Liang Chen, Shengfang Ge
Software Mentions: 1
Published: over 9 years ago

10.1016/j.str.2011.09.020

Crystallographic Analysis of Polypyrimidine Tract-Binding Protein-Raver1 Interactions Involved in Regulation of Alternative Splicing
Cited by: 37
Author(s): Amar Joshi, Miguel B. Coelho, Olga Kotik-Kogan, Peter Simpson, Stephen Matthews, Christopher W.J. Smith, Stephen Curry
Software Mentions: 1
Published: over 14 years ago

10.1016/j.str.2008.02.021

Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3′ Ends by the Human La Protein
Cited by: 75
Author(s): Olga Kotik-Kogan, Elizabeth R. Valentine, Domenico Sanfelice, Maria R. Conte, Stephen Curry
Software Mentions: 1
Published: about 18 years ago

10.1016/j.str.2013.02.007

The Architecture of EssB, an Integral Membrane Component of the Type VII Secretion System
Cited by: 17
Author(s): Martin Zoltner, D. Norman, Paul K. Fyfe, Hassane El Mkami, Tracy Palmer, William N. Hunter
Software Mentions: 1
Published: over 13 years ago

10.1016/j.str.2008.04.017

The Crystal Structure of the Escherichia coli RNase E Apoprotein and a Mechanism for RNA Degradation
Cited by: 74
Author(s): Daniel J. Koslover, Anastasia J. Callaghan, M.J. Marcaida, Elspeth F. Garman, Monika Martick, William G. Scott, Ben F. Luisi
Software Mentions: 1
Published: almost 18 years ago

10.1016/j.str.2013.03.005

Multiscale Simulations Reveal Conserved Patterns of Lipid Interactions with Aquaporins
Cited by: 69
Author(s): Phillip J. Stansfeld, Elizabeth Jefferys, Mark S. P. Sansom
Software Mentions: 1
Published: about 13 years ago

10.1016/j.str.2009.10.012

Crystallographic Insight into Collagen Recognition by Discoidin Domain Receptor 2
Cited by: 118
Author(s): Federico Carafoli, Dominique Bihan, Stavros Stathopoulos, Antonios D. Konitsiotis, Marc Kvansakul, Richard W. Farndale, Birgit Leitinger, Erhard Hohenester
Software Mentions: 1
Published: over 16 years ago

10.1016/j.str.2013.12.004

Structure of the Human FANCL RING-Ube2T Complex Reveals Determinants of Cognate E3-E2 Selection
Cited by: 68
Author(s): Charlotte Hodson, A. Purkiss, Jennifer A. Miles, Helen Walden
Software Mentions: 1
Published: over 12 years ago

10.1016/j.str.2014.10.017

Molecular Basis of Histone Tail Recognition by Human TIP5 PHD Finger and Bromodomain of the Chromatin Remodeling Complex NoRC
Cited by: 55
Author(s): C. Tallant, Erica Valentini, O. Fedorov, Lois M. Overvoorde, Fleur M. Ferguson, P. Filippakopoulos, Dmitri I. Svergun, Stefan Knapp, A. Ciulli
Software Mentions: 1
Published: over 11 years ago

10.1016/j.str.2011.04.010

Biophysical and Computational Studies of Membrane Penetration by the GRP1 Pleckstrin Homology Domain
Cited by: 54
Author(s): Craig N. Lumb, Jun He, Yi Xue, Phillip J. Stansfeld, Robert V. Stahelin, Tatiana G. Kutateladze, Mark S. P. Sansom
Software Mentions: 1
Published: almost 15 years ago

10.1016/j.str.2012.07.003

ATP-Driven Remodeling of the Linker Domain in the Dynein Motor
Cited by: 78
Author(s): A. J. Roberts, Bara Malkova, Matthew Walker, Hitoshi Sakakibara, Naoki Numata, Takahide Kon, Reiko Ohkura, Thomas A. Edwards, Peter J. Knight, Kazuo Sutoh, Kazuhiro Oiwa, Simon Burgess
Software Mentions: 1
Published: almost 14 years ago

10.1016/j.str.2015.04.021

The SWI/SNF Subunit INI1 Contains an N-Terminal Winged Helix DNA Binding Domain that Is a Target for Mutations in Schwannomatosis
Cited by: 30
Author(s): Mark D. Allen, Stefan Freund, Giovanna Zinzalla, Mark Bycroft
Software Mentions: 1
Published: about 11 years ago

10.1016/j.str.2012.08.017

The Crystal Structure of the Intact E. coli RelBE Toxin-Antitoxin Complex Provides the Structural Basis for Conditional Cooperativity
Cited by: 82
Author(s): Andreas Bøggild, N. Sofos, Kasper R. Andersen, Ane Feddersen, Ashley Easter, Lori A. Passmore, D.E. Brodersen
Software Mentions: 1
Published: almost 14 years ago

10.1016/j.str.2016.02.001

Unlocking the Bacterial SecY Translocon
Cited by: 38
Author(s): Robin A. Corey, William J. Allen, Joanna Komar, Simonas Masiulis, Sam A. Menzies, Alice Robson, Ian Collinson
Software Mentions: 1
Published: over 10 years ago

10.1016/j.str.2017.04.013

Structural Studies of HHARI/UbcH7∼Ub Reveal Unique E2∼Ub Conformational Restriction by RBR RING1
Cited by: 42
Author(s): Katja K. Dove, Jennifer L. Olszewski, Luigi Martino, David M. Duda, Xiaoli Wu, Darcie J. Miller, Katherine H. Reiter, Katrin Rittinger, Brenda A. Schulman, Rachel E. Klevit
Software Mentions: 1
Published: about 9 years ago

10.1016/j.str.2017.05.005

Structural Basis for Specific Interaction of TGFβ Signaling Regulators SARA/Endofin with HD-PTP
Cited by: 12
Author(s): Deepankar Gahloth, Colin Levy, Larry P. Walker, Lydia Wunderley, A. Paul Mould, Sandra Taylor, Philip Woodman, Lydia Tabernero
Software Mentions: 1
Published: about 9 years ago

10.1016/j.str.2017.10.004

The Cryoelectron Microscopy Structure of the Type 1 Chaperone-Usher Pilus Rod
Cited by: 43
Author(s): Manuela K. Hospenthal, Dawid Zyla, Tiago Costa, Adam Redzej, Christoph Giese, James Lillington, Rudi Glockshuber, Gabriel Waksman
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2017.11.008

Second-Shell Basic Residues Expand the Two-Metal-Ion Architecture of DNA and RNA Processing Enzymes
Cited by: 31
Author(s): Vito Genna, Matteo Colombo, Marco De Vivo, Marco Marcia
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2017.12.003

Robo1 Forms a Compact Dimer-of-Dimers Assembly
Cited by: 24
Author(s): Наталія Александрова, Irina Gutsche, Eaazhisai Kandiah, Sergiy V. Avilov, Maxim V. Petoukhov, E. Seiradake, A.A. McCarthy
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2018.02.007

Structural and Functional Insights into Bacillus subtilis Sigma Factor Inhibitor, CsfB
Cited by: 12
Author(s): Santiago Martínez-Lumbreras, Caterina Alfano, N.J. Evans, Katherine M. Collins, Kelly A. Flanagan, R. Andrew Atkinson, E. Krysztofinska, Anupama Vydyanath, Jacquelin Jackter, Sarah Fixon-Owoo, Amy H. Camp, Rivka L. Isaacson
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2018.03.019

The Structure of an Infectious Human Polyomavirus and Its Interactions with Cellular Receptors
Cited by: 29
Author(s): Daniel L. Hurdiss, Martin Frank, Joseph S. Snowden, Andrew Macdonald, Neil A. Ranson
Software Mentions: 1
Published: about 8 years ago

10.1016/j.str.2018.12.001

Selection and Characterization of Artificial Proteins Targeting the Tubulin α Subunit
Cited by: 16
Author(s): Valérie Campanacci, Agathe Urvoas, Tanja Consolati, Soraya Cantos-Fernandes, Magali Aumont-Niçaise, Marie Valerio-Lepiniec, Thomas Surrey, Philippe Minard, B. Gigant
Software Mentions: 1
Published: over 7 years ago

10.1107/S2052252517005243

Segregation of lipids near acetylcholine-receptor channels imaged by cryo-EM
Cited by: 27
Author(s): Nigel Unwin
Software Mentions: 1
Published: about 9 years ago

10.1107/S2052252520005230

Structures of substrate- and product-bound forms of a multi-domain copper nitrite reductase shed light on the role of domain tethering in protein complexes
Cited by: 5
Author(s): Daisuke Sasaki, Tatiana F. Watanabe, Robert R. Eady, R.C. Garratt, S.V. Antonyuk, S.S. Hasnain
Software Mentions: 1
Published: about 6 years ago

10.1107/S2052252521007715

Chasing the structural diversity of the transcription regulator <i>Mycobacterium tuberculosis</i> HigA2
Cited by: 2
Author(s): W A R Richardson, Gyun Won Kang, Hee Joong Lee, Kang Mu Kwon, Saron Kim, Hyo Jung Kim
Software Mentions: 1
Published: almost 5 years ago

10.1107/S2052252520007617

Structural insights into the regulation of SigB activity by RsbV and RsbW
Cited by: 9
Author(s): Deepak Pathak, Kyeong Sik Jin, Sudarshan Tandukar, Jun Ha Kim, Eunju Kwon, Dong Young Kim
Software Mentions: 1
Published: about 6 years ago

10.1107/S205225251400400X

The structure of a purple acid phosphatase involved in plant growth and pathogen defence exhibits a novel immunoglobulin-like fold
Cited by: 22
Author(s): S.V. Antonyuk, Mariusz Olczak, Teresa Olczak, Justyna Ciuraszkiewicz, R.W. Strange
Software Mentions: 1
Published: over 12 years ago

10.1107/S2052252520006053

Structural basis of self-assembly in the lipid-binding domain of mycobacterial polar growth factor Wag31
Cited by: 5
Author(s): Komal Choukate, Barnali N. Chaudhuri
Software Mentions: 1
Published: about 6 years ago

10.1107/S2052252517017833

Protein crystal lattices are dynamic assemblies: the role of conformational entropy in the protein condensed phase
Cited by: 6
Author(s): Margarita Dimova, Y. Devedjiev
Software Mentions: 1
Published: over 8 years ago

10.1107/S205225251801480X

Computational design of symmetrical eight-bladed β-propeller proteins
Cited by: 32
Author(s): Hideyuki Noguchi, Christine Addy, David Simoncini, Staf Wouters, B. Mylemans, Luc Van Meervelt, Thomas Schiex, Kam Y. J. Zhang, J.R.H. Tame, Arnout Voet
Software Mentions: 1
Published: over 7 years ago

10.1107/S205225251800996X

Twist and turn: a revised structural view on the unpaired bubble of class II CPD photolyase in complex with damaged DNA
Cited by: 4
Author(s): M. Maestre-Reyna, Junpei Yamamoto, Wei-Cheng Huang, Ming‐Daw Tsai, Lars‐Oliver Essen, Yoshitaka Bessho
Software Mentions: 1
Published: almost 8 years ago