10.15252/embr.201847182

Multiple C2 domains and transmembrane region proteins ( <scp>MCTP</scp> s) tether membranes at plasmodesmata
Cited by: 78
Author(s): Marie Brault, J.P. Petit, Françoise Immel, William J Nicolas, Marie Glavier, Lysiane Brocard, Amèlia Gaston, Mathieu Fouché, Timothy J. Hawkins, Jean-Marc Crowet, Magali Grison, V. Germain, Marion Rocher, Max Kraner, Vikram Alva, Stéphane Claverol, Andrea Paterlini, Yrjö Helariutta, Magali Deleu, Laurence Lins, Jens Tilsner, Emmanuelle Bayer
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0196751

Assigning crystallographic electron densities with free energy calculations—The case of the fluoride channel Fluc
Cited by: 2
Author(s): Igor Ariz-Extreme, Jochen S. Hub
Software Mentions: 2
Published: about 8 years ago

10.3390/ph14030214

Evaluation of the Interactions between Human Serum Albumin (HSA) and Non-Steroidal Anti-Inflammatory (NSAIDs) Drugs by Multiwavelength Molecular Fluorescence, Structural and Computational Analysis
Cited by: 16
Author(s): Susana Amézqueta, José Luís Beltrán, Anna Maria Bolioli, Lluís Campos-Vicens, F. Javier Luque, Clara Ràfols
Software Mentions: 2
Published: over 5 years ago

10.1074/jbc.M114.630681

Analysis of Human Dopamine D3 Receptor Quaternary Structure
Cited by: 23
Author(s): Sara Marsango, Gianluigi Caltabiano, Chantévy Pou, María José Varela Liste, Graeme Milligan
Software Mentions: 2
Published: about 11 years ago

10.1074/jbc.M115.645283

Organization of Subunits in the Membrane Domain of the Bovine F-ATPase Revealed by Covalent Cross-linking
Cited by: 38
Author(s): Jennifer Lee, Shuzhe Ding, Thomas B Walpole, Andrew N Holding, M.G. Montgomery, Ian M. Fearnley, John E. Walker
Software Mentions: 2
Published: about 11 years ago

10.1002/ece3.7582

The complete mitogenome of <i>Phymorhynchus</i> sp. (Neogastropoda, Conoidea, Raphitomidae) provides insights into the deep‐sea adaptive evolution of Conoidea
Cited by: 7
Author(s): Mei Yang, Dong Dong, Xinzheng Li
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.52

Regulatory versus coding signatures of natural selection in a candidate gene involved in the adaptive divergence of whitefish species pairs ( Coregonus spp.)
Cited by: 15
Author(s): Julie Jeukens, Louis Bernatchez
Software Mentions: 2
Published: over 14 years ago

10.1074/jbc.M115.659136

Structural and Functional Analysis of BipA, a Regulator of Virulence in Enteropathogenic Escherichia coli
Cited by: 31
Author(s): H. Fan, Joseph Hahm, Stephen Diggs, J. Jefferson P. Perry, Gregor Blaha
Software Mentions: 2
Published: almost 11 years ago

10.1074/jbc.M115.669895

Structural Basis for Antigen Recognition by Transglutaminase 2-specific Autoantibodies in Celiac Disease
Cited by: 27
Author(s): Xi Chen, Kathrin Hnida, Melissa A. Graewert, Jan Terje Andersen, Rasmus Iversen, Anne Tuukkanen, Dmitri I. Svergun, Ludvig M. Sollid
Software Mentions: 2
Published: almost 11 years ago

10.1080/22221751.2020.1781551

Virus strain from a mild COVID-19 patient in Hangzhou represents a new trend in SARS-CoV-2 evolution potentially related to Furin cleavage site
Cited by: 40
Author(s): Xi Jin, Kangli Xu, Penglei Jiang, Jiangshan Lian, Shaorui Hao, Hang‐Ping Yao, Hongyu Jia, Yimin Zhang, Lin Zheng, Nuoheng zheng, Dong Chen, Jinmei Yao, Jianhua Hu, Gao J, Liang Wen, Jian Shen, Yue Ren, Guodong Yu, Xiaoyan Wang, Yingfeng Lu, Xiaopeng Yu, Liang Yu, Da‐Xiong Xiang, Nanping Wu, Xiangyun Lu, Linfang Cheng, Fumin Liu, Haibo Wu, Changzhong Jin, Xiaofeng Yang, Pengxu Qian, Yunqing Qiu, Jifang Sheng, Tingbo Liang, Lanjuan Li, Yida Yang
Software Mentions: 2
Published: over 6 years ago

10.1128/JVI.00086-20

A Molecular Determinant of West Nile Virus Secretion and Morphology as a Target for Viral Attenuation
Cited by: 8
Author(s): Justine Basset, Julien Burlaud‐Gaillard, Maxence Feher, Philippe Roingeard, F.A. Rey, Nathalie Pardigon
Software Mentions: 2
Published: about 6 years ago

10.1038/srep36782

Artificial Blood for Dogs
Cited by: 21
Author(s): Kana Yamada, Kyoko Yokomaku, Moeka Kureishi, Motofusa Akiyama, Kiyohito Kihira, Teruyuki Komatsu
Software Mentions: 2
Published: over 9 years ago

10.1080/22221751.2020.1865840

Structure of the multiple functional domains from coronavirus nonstructural protein 3
Cited by: 8
Author(s): Mengxia Li, Gang Ye, Yu Si, Zhou Shen, Zhu Liu, Yuejun Shi, Shaobo Xiao, Zhen F. Fu, Guiqing Peng
Software Mentions: 2
Published: over 5 years ago

10.1038/srep37284

Genetic Epidemiology of Glucose-6-Phosphate Dehydrogenase Deficiency in the Arab World
Cited by: 51
Author(s): George Priya Doss C, Dima R. Alasmar, Reem I. Bux, P. Sneha, Fadheela Dad Bakhsh, Iman K. Al-Azwani, Rajaa El Bekay, Hatem Zayed
Software Mentions: 2
Published: over 9 years ago

10.1128/JVI.00940-20

Broad and Differential Animal Angiotensin-Converting Enzyme 2 Receptor Usage by SARS-CoV-2
Cited by: 125
Author(s): Xuesen Zhao, Danying Chen, Robert Szabla, Mou‐Xiong Zheng, Guoli Li, Pengcheng Du, Shuangli Zheng, Xinglin Li, Chuan Song, Rui Li, Ju‐Tao Guo, M.S. Junop, Hui Zeng, Hanxin Lin
Software Mentions: 2
Published: almost 6 years ago

10.1074/jbc.M115.673632

Streptococcus pneumoniae NanC
Cited by: 36
Author(s): C.D. Owen, P. Lukacik, Jonathan Potter, O.K. Sleator, G.L. Taylor, M.A. Walsh
Software Mentions: 2
Published: over 10 years ago

10.1074/jbc.M115.682203

Structure of a CGI-58 Motif Provides the Molecular Basis of Lipid Droplet Anchoring
Cited by: 41
Author(s): Andras Boeszoermenyi, Harald M. Nagy, Haribabu Arthanari, Christoph Pillip, Hanna Lindermuth, Rafael E. Luna, Gerhard Wagner, Rudolf Zechner, Klaus Zangger, Monika Oberer
Software Mentions: 2
Published: almost 11 years ago

10.1128/JVI.01601-16

Structure of Aichi Virus 1 and Its Empty Particle: Clues to Kobuvirus Genome Release Mechanism
Cited by: 12
Author(s): C. Sabin, T. Füzik, Karel Škubník, Lenka Pálková, Anders Lindberg, Pavel Plevka
Software Mentions: 2
Published: over 9 years ago

10.1128/JVI.00723-19

GII.13/21 Noroviruses Recognize Glycans with a Terminal β-Galactose via an Unconventional Glycan Binding Site
Cited by: 7
Author(s): Cong Xu, Xiaoman Sun, Jianxun Qi, Han-Bo Li, Wengang Chai, Qing Zhang, Hong Wang, Xiangyu Kong, Jiao Song, Lili Pang, Miao Jin, Dan-di Li, Ming Tan, Zhaojun Duan
Software Mentions: 2
Published: almost 7 years ago

10.1038/srep38183

Discovery and structural characterisation of new fold type IV-transaminases exemplify the diversity of this enzyme fold
Cited by: 32
Author(s): Tea Pavkov‐Keller, Gernot A. Strohmeier, Matthias Diepold, W.P.H. Peeters, Natascha Smeets, Martin Schürmann, Karl Gruber, Helmut Schwab, Kerstin Steiner
Software Mentions: 2
Published: over 9 years ago

10.1128/JVI.01253-17

NS3 from Hepatitis C Virus Strain JFH-1 Is an Unusually Robust Helicase That Is Primed To Bind and Unwind Viral RNA
Cited by: 11
Author(s): Ting Zhou, Xiao‐Ming Ren, Rebecca L. Adams, Anna Marie Pyle
Software Mentions: 2
Published: over 8 years ago

10.1128/JVI.00694-16

Crystal Structure of the Human Astrovirus Capsid Protein
Cited by: 32
Author(s): Yukimatsu Toh, Justin Harper, Kelly A. Dryden, Mark Yeager, Carlos F. Arias, Ernesto Méndez, Yizhi Jane Tao
Software Mentions: 2
Published: over 9 years ago

10.1038/srep38137

Engineering of a thermostable esterase Est816 to improve its quorum-quenching activity and the underlying structural basis
Cited by: 11
Author(s): Xiwen Liu, Liping Cao, Xiaoran Fan, Yuhuan Liu, Wei Xie
Software Mentions: 2
Published: over 9 years ago

10.3390/ph14070669

New (Iso)quinolinyl-pyridine-2,6-dicarboxamide G-Quadruplex Stabilizers. A Structure-Activity Relationship Study
Cited by: 7
Author(s): Enrico Cadoni, Pedro R. Magalhães, Rita M. Emídio, Eduarda Mendes, Jorge M. B. Vítor, Josué Carvalho, Carla Cruz, Bruno L. Victor, Alexandra Paulo
Software Mentions: 2
Published: almost 5 years ago

10.1128/JVI.01541-17

The Three-Fold Axis of the HIV-1 Capsid Lattice Is the Species-Specific Binding Interface for TRIM5α
Cited by: 20
Author(s): Damien Morger, Franziska Zosel, Martin Bühlmann, Sara Züger, Maximilian Mittelviefhaus, Benjamin Schuler, Jeremy Luban, Markus G. Grütter
Software Mentions: 2
Published: over 8 years ago

10.3390/molecules25102404

Structural Basis for Broad Substrate Selectivity of Alcohol Dehydrogenase YjgB from Escherichia coli
Cited by: 2
Author(s): Giang T. Nguyen, Yeon-Gil Kim, Joo‐Myung Ahn, Jeong Ho Chang
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0121494

Crystal Structures of the Kinase Domain of the Sulfate-Activating Complex in Mycobacterium tuberculosis
Cited by: 9
Author(s): Ömer Poyraz, Katharina Brunner, Bernhard Lohkamp, Hanna Axelsson, Lars G.J. Hammarström, R. Schnell, Günter Schneider
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-019-46230-8

Structural characterization of life-extending Caenorhabditis elegans Lipid Binding Protein 8
Cited by: 8
Author(s): Matthew Tillman, Manoj Khadka, Jonathon Duffy, Meng C. Wang, Eric A. Ortlund
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-019-46770-z

Structural and Functional Insights into GluK3-kainate Receptor Desensitization and Recovery
Cited by: 18
Author(s): Jyoti Kumari, Rajesh Vinnakota, Janesh Kumar
Software Mentions: 2
Published: almost 7 years ago

10.1080/22221751.2019.1707716

Structural characterization of glycinamide-RNase-transformylase T from <i>Mycobacterium tuberculosis</i>
Cited by: 1
Author(s): Chuanbo Cong, Zuliang Liu, Liguo Liu, Jianmin Wang, Qi Jin
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.M115.659912

Uncovering the Mechanism of Aggregation of Human Transthyretin
Cited by: 112
Author(s): Lorena Saelices, Lisa M. Johnson, Wilson Y. Liang, M.R. Sawaya, Duilio Cascio, Piotr Ruchala, Julian P. Whitelegge, Lin Jiang, Roland Riek, David Eisenberg
Software Mentions: 2
Published: over 10 years ago

10.1080/22221751.2021.1899770

The preclinical inhibitor GS441524 in combination with GC376 efficaciously inhibited the proliferation of SARS-CoV-2 in the mouse respiratory tract
Cited by: 33
Author(s): Yuejun Shi, Lei Shuai, Zhiyuan Wen, Chong Wang, Yuanyuan Yan, Zhe Jiao, Fenglin Guo, Zhen F. Fu, Huanchun Chen, Zhigao Bu, Guiqing Peng
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0042612

FASCAPLYSIN as a Specific Inhibitor for CDK4: Insights from Molecular Modelling
Cited by: 41
Author(s): Muhammad Shafiq, Thomas Steinbrecher, Ralf Schmid
Software Mentions: 2
Published: almost 14 years ago

10.1128/JVI.01051-20

Molecular Characterization of Influenza C Viruses from Outbreaks in Hong Kong SAR, China
Cited by: 12
Author(s): Rodney S. Daniels, Herman Tse, Burcu Ermetal, Zheng Xiang, Deborah J. Jackson, Jeremy Guntoro, Jérôme Nicod, Aengus Stewart, KJ Cross, Saira Hussain, John W. McCauley, Janice Lo
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-47485-x

Population variability of rhesus macaque (Macaca mulatta) NAT1 gene for arylamine N-acetyltransferase 1: Functional effects and comparison with human
Cited by: 2
Author(s): Sotiria Boukouvala, Zoi Chasapopoulou, Despina Giannouri, Evanthia Kontomina, Nikolaos Marinakis, Sophia V. Rizou, Ioanna Stefani, Theodora Tsirka, Charlotte Veyssière, Sofia Zaliou, Audrey Sabbagh, Brigitte Crouau‐Roy, Giannoulis Fakis
Software Mentions: 2
Published: almost 7 years ago

10.1074/jbc.M115.685065

Structural and Functional Studies of a Newly Grouped Haloquadratum walsbyi Bacteriorhodopsin Reveal the Acid-resistant Light-driven Proton Pumping Activity
Cited by: 13
Author(s): Min‐Feng Hsu, Hsu Yuan Fu, Chun-Jie Cai, Hsiu-Pin Yi, Chii‐Shen Yang, Andrew H.-J. Wang
Software Mentions: 2
Published: over 10 years ago

10.1128/JVI.00848-21

Structures of Substrate Complexes of Foamy Viral Protease-Reverse Transcriptase
Cited by: 2
Author(s): Martyna Nowacka, Elżbieta Nowak, Mariusz Czarnocki-Cieciura, Justyna Jackiewicz, Krzysztof Skowronek, Roman H. Szczepanowski, Birgitta M. Wöhrl, Marcin Nowotny
Software Mentions: 2
Published: almost 5 years ago

10.1074/jbc.M115.698589

The Tomato Nucleotide-binding Leucine-rich Repeat Immune Receptor I-2 Couples DNA-binding to Nucleotide-binding Domain Nucleotide Exchange
Cited by: 18
Author(s): Stepan Fenyk, Christopher H. Dixon, William Gittens, Philip D. Townsend, Gary J. Sharples, Lars‐Olof Pålsson, Frank L. W. Takken, Martin J. Cann
Software Mentions: 2
Published: over 10 years ago

10.1128/JVI.03065-15

A Dimerization-Dependent Mechanism Drives the Endoribonuclease Function of Porcine Reproductive and Respiratory Syndrome Virus nsp11
Cited by: 26
Author(s): Yuejun Shi, Youwen Li, Yingying Lei, Gang Ye, Zhou Shen, Limeng Sun, Rui Luo, Dan Wang, Zhen F. Fu, Shaobo Xiao, Guiqing Peng
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pbio.2003145

Uncovering protein–protein interactions through a team-based undergraduate biochemistry course
Cited by: 14
Author(s): David L. Cookmeyer, Emily S. Winesett, Bashkim Kokona, Adam R. Huff, Sabina Aliev, Noah B. Bloch, Joshua A. Bulos, Irene L. Evans, Christian Fagre, Kerilyn N. Godbe, Maryna Khromava, Daniel Konstantinovsky, Alexander E. Lafrance, Alexandra J. Lamacki, Robert C. Parry, Jeanne M. Quinn, Alana M. Thurston, Kathleen J. S. Tsai, Aurelio Mollo, Max J. Cryle, Robert Fairman, Louise K. Charkoudian
Software Mentions: 2
Published: over 8 years ago

10.1074/jbc.M115.685222

The Evolutionarily Conserved Tre2/Bub2/Cdc16 (TBC), Lysin Motif (LysM), Domain Catalytic (TLDc) Domain Is Neuroprotective against Oxidative Stress
Cited by: 44
Author(s): Mattéa J. Finelli, Luis Sánchez‐Pulido, Kevin X. Liu, Kay E. Davies, Peter L. Oliver
Software Mentions: 2
Published: over 10 years ago

10.1074/jbc.M115.672790

Agonistic Human Antibodies Binding to Lecithin-Cholesterol Acyltransferase Modulate High Density Lipoprotein Metabolism
Cited by: 29
Author(s): Ruwanthi N. Gunawardane, Preston Fordstrom, Derek E. Piper, Stephanie Masterman, Sophia Siu, Dongming Liu, M Ichael S. Brown, Mei Lü, Jie Tang, Richard Zhang, Janet Cheng, Andrew J. Gates, David Meininger, Janice Chan, Tim Carlson, Nigel Walker, Margrit Schwarz, John Delaney, Mingyue Zhou
Software Mentions: 2
Published: over 10 years ago

10.1016/j.molcel.2020.06.013

Structure of the Inhibited State of the Sec Translocon
Cited by: 42
Author(s): S. Gerard, Belinda S. Hall, A. Zaki, Katherine Corfield, Peter Mayerhofer, Catia Costa, Daniel K. Whelligan, Philip C. Biggin, Rachel E. Simmonds, M.K. Higgins
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0008949

An Integrated Mass-Spectrometry Pipeline Identifies Novel Protein Coding-Regions in the Human Genome
Cited by: 26
Author(s): Danny A. Bitton, Duncan L. Smith, Yvonne Connolly, Paul J. Scutt, Crispin Miller
Software Mentions: 2
Published: over 16 years ago

10.3390/molecules25040823

Virtual Screening Approach to Identify High-Affinity Inhibitors of Serum and Glucocorticoid-Regulated Kinase 1 among Bioactive Natural Products: Combined Molecular Docking and Simulation Studies
Cited by: 76
Author(s): Taj Mohammad, Shiza Siddiqui, Anas Shamsi, Mohamed F. Alajmi, Afzal Hussain, Asimul Islam, Faizan Ahmad, Md. Imtaiyaz Hassan
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-48612-4

Non-Contact Universal Sample Presentation for Room Temperature Macromolecular Crystallography Using Acoustic Levitation
Cited by: 16
Author(s): Robert H. Morris, E. Dye, Danny Axford, Michael I. Newton, John Beale, Peter Docker
Software Mentions: 2
Published: almost 7 years ago

10.1128/JVI.02511-16

Structural Definition of Duck Major Histocompatibility Complex Class I Molecules That Might Explain Efficient Cytotoxic T Lymphocyte Immunity to Influenza A Virus
Cited by: 16
Author(s): Yanan Wu, Junya Wang, Shenggen Fan, Rong Chen, Yanjie Liu, Jianhua Zhang, Hongyu Yuan, Ruiying Liang, Nianzhi Zhang, Chun Xia
Software Mentions: 2
Published: almost 9 years ago

10.1186/1479-5876-10-35

Hyperglycemic conditions inhibit C3-mediated immunologic control of Staphylococcus aureus
Cited by: 37
Author(s): Pamela S. Hair, Charlene G. Echague, Reuben D. Rohn, Neel K. Krishna, Julius O. Nyalwidhe, Kenji M. Cunnion
Software Mentions: 2
Published: over 14 years ago

10.3390/microorganisms7110498

Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17
Cited by: 17
Author(s): Lukáš Chrást, Katsiaryna Tratsiak, Joan Planas-Iglesias, Lukáš Daniel, Tatyana Prudniková, Jan Brezovský, David Bednář, Ivana Kutá Smatanová, Radka Chaloupková, Jiřı́ Damborský
Software Mentions: 2
Published: over 6 years ago

10.1016/j.molcel.2009.09.038

An Autoinhibitory Tyrosine Motif in the Cell-Cycle-Regulated Nek7 Kinase Is Released through Binding of Nek9
Cited by: 86
Author(s): Mark W. Richards, Laura O’Regan, Corine Mas-Droux, Joëlle Blot, Jack Cheung, Swen Hoelder, Andrew M. Fry, Richard Bayliss
Software Mentions: 2
Published: over 16 years ago

10.1155/2019/1046504

Peptides from Cauliflower By-Products, Obtained by an Efficient, Ecosustainable, and Semi-Industrial Method, Exert Protective Effects on Endothelial Function
Cited by: 17
Author(s): Cristiana Caliceti, Anna Laura Capriotti, Donato Calabria, Francesca Bonvicini, Riccardo Zenezini Chiozzi, Carmela Maria Montone, Susy Piovesana, Martina Zangheri, Mara Mirasoli, Patrizia Simoni, Aldo Laganà, Aldo Roda
Software Mentions: 2
Published: over 7 years ago

10.3390/ph12020058

Insights into the Molecular Mechanisms of Eg5 Inhibition by (+)-Morelloflavone
Cited by: 11
Author(s): Tomisin Happy Ogunwa, Emiliano Laudadio, Roberta Galeazzi, Takayuki Miyanishi
Software Mentions: 2
Published: about 7 years ago

10.1074/jbc.M116.743948

The Mechanism by Which Arabinoxylanases Can Recognize Highly Decorated Xylans
Cited by: 34
Author(s): Aurore Labourel, Lucy I. Crouch, Joana L. A. Brás, Adam Jackson, Artur Rogowski, Joe Gray, Madhav P. Yadav, Bernard Henrissat, Carlos M. G. A. Fontes, Harry J. Gilbert, Shabir Najmudin, Arnaud Baslé, Fiona Cuskin
Software Mentions: 2
Published: almost 10 years ago

10.1038/s41598-019-50671-6

Scribble co-operatively binds multiple α1D-adrenergic receptor C-terminal PDZ ligands
Cited by: 13
Author(s): Eric M. Janezic, Dorathy-Ann Harris, Diana Dinh, Kyung-Soon Lee, Aaron Stewart, Thomas R. Hinds, Peter L. Hsu, Ning Zheng, Chris Hague
Software Mentions: 2
Published: almost 7 years ago

10.3390/molecules26185554

Enabling Efficient Folding and High-Resolution Crystallographic Analysis of Bracelet Cyclotides
Cited by: 7
Author(s): Yen‐Hua Huang, Qingdan Du, Zhihao Jiang, G. J. King, Brett Collins, Conan K. Wang, David J. Craik
Software Mentions: 2
Published: almost 5 years ago

10.1289/ehp.1306902

Mimicking of Estradiol Binding by Flame Retardants and Their Metabolites: A Crystallographic Analysis
Cited by: 79
Author(s): R.A. Gosavi, Gabriel A. Knudsen, Linda S. Birnbaum, Lars C. Pedersen
Software Mentions: 2
Published: almost 13 years ago

10.1111/1462-2920.13036

Closing the gaps on the viral photosystem‐ <scp>I</scp> <i> psa <scp>DCAB</scp> </i> gene organization
Cited by: 7
Author(s): Sheila Roitman, José Flores‐Uribe, Alon Philosof, Ben Knowles, Forest Rohwer, J. Cesar Ignacio‐Espinoza, Matthew B. Sullivan, Francisco M. Cornejo‐Castillo, Pablo Sánchez, Silvia G. Acinas, Chris L. Dupont, Oded Béjà
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-019-51530-0

Assessment of glucagon receptor occupancy by Positron Emission Tomography in non-human primates
Cited by: 10
Author(s): Olof Eriksson, Irina Velikyan, Torsten Haack, Martin Bossart, Andreas Evers, Iina Laitinen, Philip J. Larsen, Oliver Plettenburg, Akihiro Takano, Christer Halldin, Gunnar Antoni, Lars Johansson, Stefan Pierrou, Michael R. Wagner
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.M116.752782

The Salmonella Effector SpvD Is a Cysteine Hydrolase with a Serovar-specific Polymorphism Influencing Catalytic Activity, Suppression of Immune Responses, and Bacterial Virulence
Cited by: 31
Author(s): Grzegorz Grabe, Yue Zhang, Michael Przydacz, Nathalie Rolhion, Yi Yang, Jonathan N. Pruneda, David Komander, David W. Holden, S. Hare
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0006820

The Crystal Structure of the Escherichia coli Autoinducer-2 Processing Protein LsrF
Cited by: 17
Author(s): Zamia Diaz, Karina B. Xavier, Stephen T. Miller
Software Mentions: 2
Published: almost 17 years ago

10.3390/nu11122961

The Potential Synergistic Modulation of AMPK by Lippia citriodora Compounds as a Target in Metabolic Disorders
Cited by: 14
Author(s): Mariló Olivares-Vicente, Noelia Sánchez‐Marzo, José Antonio Encinar, María de la Luz Cádiz-Gurrea, Jesús Lozano-Sánchez, Antonio Segura‐Carretero, David Arráez-Román, Catherine Riva, Enrique Barrajón‐Catalán, María Herranz-López, Vicente Micol
Software Mentions: 2
Published: over 6 years ago

10.1128/JVI.01560-20

Orsay Virus CP-δ Adopts a Novel β-Bracelet Structural Fold and Incorporates into Virions as a Head Fiber
Cited by: 0
Author(s): Yusong R. Guo, Yingying Fan, Ying Zhou, Miao Jin, Jim L. Zhang, Hongbing Jiang, Matthew V. Holt, Tao Wang, Nicolas L. Young, David Wang, Weiwei Zhong, Yizhi Jane Tao
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0082484

Structure-Based Analysis of A19D, a Variant of Transthyretin Involved in Familial Amyloid Cardiomyopathy
Cited by: 5
Author(s): Priscila S. Ferreira, Oliveira Sant’Anna, Nathalia Varejão, Cristina Ferreira Lima, Sérgio A. P. Novis, Renata V. Barbosa, Concy M. Caldeira, Franklin David Rumjanek, Salvador Ventura, Márcia Waddington Cruz, Débora Foguel
Software Mentions: 2
Published: over 12 years ago

10.1074/jbc.M116.749713

Structural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity
Cited by: 27
Author(s): Shaimaa Waz, Teruya Nakamura, Keisuke Hirata, Yukari Koga‐Ogawa, Mami Chirifu, Takao Arimori, Taro Tamada, Shinji Ikemizu, Yusaku Nakabeppu, Yuriko Yamagata
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-019-52121-9

Rigid fusions of designed helical repeat binding proteins efficiently protect a binding surface from crystal contacts
Cited by: 11
Author(s): Patrick Erñst, Annemarie Honegger, Floor van der Valk, Christina Ewald, Peer R. E. Mittl, Andreas Plückthun
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.M116.770545

A Novel Kleefstra Syndrome-associated Variant That Affects the Conserved TPLX Motif within the Ankyrin Repeat of EHMT1 Leads to Abnormal Protein Folding
Cited by: 16
Author(s): Patrick R. Blackburn, Alexander Tischer, Michael T. Zimmermann, Jennifer L. Kemppainen, Sujatha Sastry, Amy E. Knight Johnson, Margot A. Cousin, Nicole J. Boczek, Gavin R. Oliver, Vinod K. Misra, Ralitza H. Gavrilova, Gwen Lomberk, Matthew Auton, Raúl Urrutia, Eric W. Klee
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-019-52626-3

The citrus flavonoid naringenin impairs the in vitro infection of human cells by Zika virus
Cited by: 68
Author(s): Allan Henrique Depieri Cataneo, Diogo Kuczera, Andrea Cristine Koishi, Camila Zanluca, Guilherme Ferreira Silveira, Thaís Bonato de Arruda, Andréia Akemi Suzukawa, Leandro Oliveira Bortot, Marcelo Dias‐Baruffi, Waldiceu A. Verri, Anny Waloski Robert, Marco Augusto Stimamiglio, Claudia Nunes Duarte dos Santos, Pryscilla Fanini Wowk, Juliano Bordignon
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-52964-2

Structures of GapR reveal a central channel which could accommodate B-DNA
Cited by: 9
Author(s): M.J. Tarry, C. Harmel, James Taylor, Gregory T. Marczynski, T.M. Schmeing
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.M116.763243

Autophosphorylation-based Calcium (Ca2+) Sensitivity Priming and Ca2+/Calmodulin Inhibition of Arabidopsis thaliana Ca2+-dependent Protein Kinase 28 (CPK28)
Cited by: 44
Author(s): Kyle W. Bender, R. Kevin Blackburn, Jacqueline Monaghan, Paul Derbyshire, Frank L.H. Menke, Cyril Zipfel, Michael B. Goshe, Raymond E. Zielinski, Steven C. Huber
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-019-53755-5

Structural basis for phospholipase A2-like toxin inhibition by the synthetic compound Varespladib (LY315920)
Cited by: 44
Author(s): Daniela P. Marchi-Salvador, Antoniel Augusto Severo Gomes, Wendy Bryan-Quirós, Julián Fernández, Matthew R. Lewin, José Marı́a Gutiérrez, Bruno Lomonte, Marcos R.M. Fontes
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-51482-5

Molecular Characterization of Auxin Efflux Carrier- ABCB1 in hexaploid wheat
Cited by: 3
Author(s): Amita Mohan, Amandeep Kaur Dhaliwal, R. Nagarajan, Kulvinder S. Gill
Software Mentions: 2
Published: over 6 years ago

10.1099/mic.0.051987-0

Structure–function analysis of HsiF, a gp25-like component of the type VI secretion system, in Pseudomonas aeruginosa
Cited by: 49
Author(s): Nadine S. Lossi, Rana Dajani, Paul S. Freemont, Alain Filloux
Software Mentions: 2
Published: over 14 years ago

10.1038/s41598-019-53868-x

Novel miR-29b target regulation patterns are revealed in two different cell lines
Cited by: 9
Author(s): Wenting Zhao, Lesley Cheng, Camelia Quek, Shayne A. Bellingham, Andrew F. Hill
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0221446

An in silico approach towards identification of novel drug targets in pathogenic species of Leptospira
Cited by: 13
Author(s): Reena Gupta, Rashi Verma, Dibyabhaba Pradhan, Arun K. Jain, Amineni Umamaheswari, C. S.
Software Mentions: 2
Published: almost 7 years ago

10.1074/jbc.M117.775031

Structure of human promyeloperoxidase (proMPO) and the role of the propeptide in processing and maturation
Cited by: 37
Author(s): Irina Grishkovskaya, Martina Paumann-Page, Rupert Tscheließnig, Johanna Stampler, Stefan Hofbauer, Monika Soudi, Benjamin Sevcnikar, Chris Oostenbrink, Paul G. Furtmüller, Kristina Djinović-Carugo, William M. Nauseef, Christian Obinger
Software Mentions: 2
Published: about 9 years ago

10.1074/jbc.M117.781948

Structure of the WipA protein reveals a novel tyrosine protein phosphatase effector from Legionella pneumophila
Cited by: 10
Author(s): Nikos Pinotsis, Gabriel Waksman
Software Mentions: 2
Published: about 9 years ago

10.1074/jbc.M117.780395

The crystal structure of mammalian inositol 1,3,4,5,6-pentakisphosphate 2-kinase reveals a new zinc-binding site and key features for protein function
Cited by: 7
Author(s): Elsa Franco-Echevarría, Julia Sanz‐Aparicio, Charles A. Brearley, Juana María González-Rubio, Beatriz González
Software Mentions: 2
Published: about 9 years ago

10.1074/jbc.M117.797811

Discovery of a microbial transglutaminase enabling highly site-specific labeling of proteins
Cited by: 42
Author(s): Wojtek Steffen, Fu Chong Ko, Jigar Patel, Victor I. Lyamichev, Thomas Albert, Jörg Benz, M.G. Rudolph, Frank Bergmann, Thomas Streidl, Peter Kratzsch, Mara Boenitz-Dulat, Tobias Oelschlaegel, Michael Schraeml
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41431-020-00728-2

NAA10 p.(N101K) disrupts N-terminal acetyltransferase complex NatA and is associated with developmental delay and hemihypertrophy
Cited by: 6
Author(s): Nina McTiernan, Harinder Gill, Carlos E. Prada, Harry Pachajoa, Juliana Lores, Causes Study, Thomas Arnesen
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0096809

Calponin-Like Chd64 Is Partly Disordered
Cited by: 10
Author(s): Małgorzata Kozłowska, Aneta Tarczewska, Michał Jakób, Kamil Szpotkowski, Magdalena Wojtas, Grzegorz Rymarczyk, Andrzej Ożyhar
Software Mentions: 2
Published: about 12 years ago

10.1038/s41598-019-55635-4

Damaging coding variants within kainate receptor channel genes are enriched in individuals with schizophrenia, autism and intellectual disabilities
Cited by: 10
Author(s): Maria Koromina, Miles Flitton, Alix Blockley, Ian R. Mellor, Helen Miranda Knight
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.M117.802587

Phosphorylation of human enhancer filamentation 1 (HEF1) stimulates interaction with Polo-like kinase 1 leading to HEF1 localization to focal adhesions
Cited by: 6
Author(s): Kyung Ho Lee, Jeong Ah Hwang, Sun Ok Kim, Jung Hee Kim, Sang Chul Shin, Eunice Eun Kyeong Kim, Kyung S. Lee, Kunsoo Rhee, Byeong Hwa Jeon, Jeong Kyu Bang, Hyunjoo Cha-Molstad, Nak-Kyun Soung, Jae Hyuk Jang, Sung-Kyun Ko, Hee Gu Lee, Jong Seog Ahn, Yongtae Kwon, Bo Yeon Kim
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0092636

In-Silico Analysis of Binding Site Features and Substrate Selectivity in Plant Flavonoid-3-O Glycosyltransferases (F3GT) through Molecular Modeling, Docking and Dynamics Simulation Studies
Cited by: 12
Author(s): Ranu Sharma, Priyabrata Panigrahi, C.G. Suresh
Software Mentions: 2
Published: over 12 years ago

10.1038/s41598-019-56499-4

A Structurally-Validated Multiple Sequence Alignment of 497 Human Protein Kinase Domains
Cited by: 68
Author(s): Vivek Modi, Roland L. Dunbrack
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-56458-z

Conformational and functional characterization of artificially conjugated non-canonical ubiquitin dimers
Cited by: 7
Author(s): Tobias Schneider, Andrej Berg, Zeynel Ulusoy, Martin Gamerdinger, Christine Peter, Michael Kovermann
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-56557-x

Structure-Guided Design of a Fluorescent Probe for the Visualization of FtsZ in Clinically Important Gram-Positive and Gram-Negative Bacterial Pathogens
Cited by: 20
Author(s): Edgar Ferrer-González, Junnosuke Fujita, Takumi Yoshizawa, Julia M. Nelson, Alyssa Pilch, Elani Hillman, M. Ozawa, Natsuko Kuroda, Hassan Al-Tameemi, Jeffrey M. Boyd, Edmond J. LaVoie, Hideki Matsumura, Daniel S. Pilch
Software Mentions: 2
Published: over 6 years ago

10.1016/j.ejmech.2018.04.035

Aminobenzothiazole derivatives stabilize the thermolabile p53 cancer mutant Y220C and show anticancer activity in p53-Y220C cell lines
Cited by: 52
Author(s): Matthias G. J. Baud, Matthias R. Bauer, Lorena Verduci, Felix A. Dingler, Ketan Patel, Debmalya Roy, A.C. Joerger, Alan R. Fersht
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-019-56257-6

High resolution structural and functional analysis of a hemopexin motif protein from Dolichos
Cited by: 0
Author(s): Sarita Chandan Sharma, Ashish Kumar, Sharad Vashisht, Dinakar M. Salunke
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-56135-1

Shortening injection matrix for serial crystallography
Cited by: 29
Author(s): Ki Hyun Nam
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.M117.815316

An allosteric binding site of the α7 nicotinic acetylcholine receptor revealed in a humanized acetylcholine-binding protein
Cited by: 29
Author(s): F. Delbart, Marijke Brams, Fabian Gruss, Sam Noppen, Steve Peigneur, Sandro Boland, Patrick Chaltin, J. Brandão-Neto, Frank von Delft, Wouter G. Touw, Robbie P. Joosten, Sandra Liekens, Jan Tytgat, Chris Ulens
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-019-56825-w

Structural insights into the promiscuous DNA binding and broad substrate selectivity of fowlpox virus resolvase
Cited by: 1
Author(s): Na Li, Ke Shi, Timsi Rao, Surajit Banerjee, Hideki Aihara
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.RA117.000119

Structural analysis of group II chitinase (ChtII) catalysis completes the puzzle of chitin hydrolysis in insects
Cited by: 45
Author(s): Wei Chen, Mingli Qu, Yong Zhou, Qing Yang
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-020-57419-7

Conformational changes in Apolipoprotein N-acyltransferase (Lnt)
Cited by: 6
Author(s): B. Wiseman, Martin Högbom
Software Mentions: 2
Published: over 6 years ago

10.1074/jbc.M117.816348

Exceptionally high-affinity Ras binders that remodel its effector domain
Cited by: 33
Author(s): John H. McGee, So Youn Shim, Seung-Joo Lee, Paige Swanson, Sam Y. Jiang, Michael A. Durney, Gregory L. Verdine
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0236538

Sites of vulnerability on ricin B chain revealed through epitope mapping of toxin-neutralizing monoclonal antibodies
Cited by: 3
Author(s): David J. Vance, Amanda Y. Poon, Nicholas J. Mantis
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-58316-9

Comparative study of the interactions between fungal transcription factor nuclear localization sequences with mammalian and fungal importin-alpha
Cited by: 7
Author(s): Natália Elisa Bernardes, C.A. Fukuda, Tainá D. da Silva, H.C. Oliveira, Andrea C. de Barros, Thiago R. Dreyer, Maria Célia Bertolini, Marcos R.M. Fontes
Software Mentions: 2
Published: over 6 years ago

10.1155/2020/3219840

Screening for a Potential Therapeutic Agent from the Herbal Formula in the 4th Edition of the Chinese National Guidelines for the Initial-Stage Management of COVID-19 via Molecular Docking
Cited by: 13
Author(s): Yue Sun, Angela Wei Hong Yang, Andrew Hung, George Binh Lenon
Software Mentions: 2
Published: over 5 years ago

10.1155/2020/2396569

Systematically Exploring the Antitumor Mechanisms of Core Chinese Herbs on Hepatocellular Carcinoma: A Computational Study
Cited by: 4
Author(s): Zhulin Wu, Li He, Lianan Wang, Lisheng Peng
Software Mentions: 2
Published: almost 6 years ago

10.1155/2020/4863015

Uncovering the Mechanism of the Effects of <i>Pien-Tze-Huang</i> on Liver Cancer Using Network Pharmacology and Molecular Docking
Cited by: 5
Author(s): Shanghui Liu, Run Wang, Yan Lou, Jia Liu
Software Mentions: 2
Published: almost 6 years ago

10.1074/jbc.RA118.002291

A low-complexity region in the YTH domain protein Mmi1 enhances RNA binding
Cited by: 11
Author(s): James A.W. Stowell, Jane L. Wagstaff, C.P. Hill, Myeong-Hee Yu, Stephen H. McLaughlin, Stefan Freund, Lori A. Passmore
Software Mentions: 2
Published: about 8 years ago