Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: PyFBA
https://packages.ecosyste.ms/registries/pypi.org/packages/PyFBA
A Python implementation of flux balance analysis
20 versions
Latest release: about 3 years ago
27 downloads last month
Papers Mentioning PyFBA 4
10.1186/s12859-018-2472-z
Automated generation of genome-scale metabolic draft reconstructions based on KEGGCited by: 55
Author(s): Emil Karlsen, Christian Schulz, Eivind Almaas
Software Mentions: 4
Published: almost 6 years ago
10.1371/journal.pcbi.1008208
MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kineticsCited by: 14
Author(s): Zachary B. Haiman, Daniel C. Zielinski, Yuko Koike, James T. Yurkovich, Jaehyung Kim
Software Mentions: 4
Published: almost 4 years ago
10.3389/fmicb.2016.00907
From DNA to FBA: How to Build Your Own Genome-Scale Metabolic ModelCited by: 39
Author(s): Daniel A. Cuevas, Janaka N. Edirisinghe, Chris Henry, Ross Overbeek, Taylor O’Connell, Robert A. Edwards
Software Mentions: 2
Published: over 8 years ago
10.3390/metabo10040156
Towards Predicting Gut Microbial Metabolism: Integration of Flux Balance Analysis and Untargeted MetabolomicsCited by: 8
Author(s): Ellen Kuang, Matthew W. Marney, Daniel A. Cuevas, Robert A. Edwards, Erica M. Forsberg
Software Mentions: 1
Published: over 4 years ago