Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Picasso
https://packages.ecosyste.ms/registries/pypi.org/packages/Picasso
A simple web framework for Python.
3 versions
Latest release: over 13 years ago
52 downloads last month
Papers Mentioning Picasso 28
10.1186/1471-2105-6-216
JACOP: A simple and robust method for the automated classification of protein sequences with modular architectureCited by: 22
Author(s): Peter Sperisen, Marco Pagni
Software Mentions: 4
Published: about 19 years ago
10.1186/1756-0381-2-3
Partitioning clustering algorithms for protein sequence data setsCited by: 17
Author(s): Sondès Fayech, Nadia Essoussi, Mohamed Limam
Software Mentions: 3
Published: over 15 years ago
10.1186/1751-0473-5-9
IHE cross-enterprise document sharing for imaging: interoperability testing softwareCited by: 18
Author(s): Rita Noumeir, Renaud Bérubé
Software Mentions: 3
Published: about 14 years ago
10.3389/fpls.2021.682879
High-Throughput Sequencing of Small RNAs for the Sanitary Certification of Viruses in GrapevineCited by: 3
Author(s): L. Velasco, Carlos Padilla
Software Mentions: 3
Published: over 3 years ago
10.1186/1471-2105-6-242
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural networksCited by: 13
Author(s): Qicheng Ma, Gung Wei Chirn, Richard Cai, Joseph D. Szustakowski, Nanguneri Nirmala
Software Mentions: 2
Published: about 19 years ago
10.3389/fnsyn.2021.671288
Visualizing Synaptic Multi-Protein Patterns of Neuronal Tissue With DNA-Assisted Single-Molecule Localization MicroscopyCited by: 5
Author(s): K. Narayanasamy, Aleksandar Stojic, Yunqing Li, Steffen Sass, Marina Hesse, Nina S. Deußner-Helfmann, Marina S. Dietz, Thomas Kuner, Maja Klevanski, Mike Heilemann
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-017-15313-9
Gpufit: An open-source toolkit for GPU-accelerated curve fittingCited by: 44
Author(s): Adrian Przybylski, Björn Thiel, Jan Keller‐Findeisen, Bernd Stock, Mark Bates
Software Mentions: 2
Published: almost 7 years ago
10.1186/s12859-015-0679-9
Breaking the computational barriers of pairwise genome comparisonCited by: 16
Author(s): Óscar Torreño, Oswaldo Trelles
Software Mentions: 2
Published: about 9 years ago
10.3390/ijms21082803
Single-Molecule Super-Resolution Microscopy Reveals Heteromeric Complexes of MET and EGFR upon Ligand ActivationCited by: 23
Author(s): Marie-Lena I. E. Harwardt, Mark S. Schröder, Yunqing Li, Sebastian Malkusch, Petra Freund, Shashi Gupta, Nebojša Janjić, Sebastian Strauss, Ralf Jungmann, Marina S. Dietz, Mike Heilemann
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0162176
What Homophones Say about WordsCited by: 8
Author(s): Isabelle Dautriche, Emmanuel Chemla
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pgen.1007872
Walking along chromosomes with super-resolution imaging, contact maps, and integrative modelingCited by: 197
Author(s): Guy Nir, Irene Farabella, Cynthia Pérez Estrada, Carl G. Ebeling, Brian J. Beliveau, Hiroshi Sasaki, S. Dean Lee, Son C. Nguyen, Ruth B. McCole, Shyamtanu Chattoraj, Jelena Erceg, Jumana AlHaj Abed, Nuno M. C. Martins, Huy Nguyen, Mohammed A. Hannan, Sheikh Russell, Neva C. Durand, Suhas S.P. Rao, Jocelyn Y. Kishi, Paula Soler-Vila, Michele Di Pierro, José N. Onuchic, Steven P. Callahan, John Schreiner, Jeff A. Stuckey, Peng Yin, E Aiden, Marc A. Martí‐Renom, C-ting Wu
Software Mentions: 2
Published: almost 6 years ago
10.1186/1471-2105-5-196
Cited by: 36Author(s): N. Kaplan, Moriah Friedlich, Menachem Fromer, Michal Linial
Software Mentions: 2
Published: almost 21 years ago
10.1186/1471-2105-9-298
Application of nonnegative matrix factorization to improve profile-profile alignment features for fold recognition and remote homolog detectionCited by: 15
Author(s): Inkyung Jung, Jaehyung Lee, Sang Yup Lee, Dongsup Kim
Software Mentions: 2
Published: over 16 years ago
10.3389/fpsyg.2018.02437
A Functional Model of Kitsch and Art: Linking Aesthetic Appreciation to the Dynamics of Social MotivationCited by: 9
Author(s): Stefan A. Ortlieb, Claus-Christian Carbon
Software Mentions: 2
Published: almost 6 years ago
10.1007/s10967-017-5667-2
Gamma spectrometry in the ITWG CMX-4 exerciseCited by: 10
Author(s): L. Lakosi, József Zsigrai, A. Kocsonya, Tam Cong Nguyen, Henrik Ramebäck, Tashi Parsons-Moss, N. Gharibyan, Κ. J. Moody
Software Mentions: 1
Published: almost 7 years ago
10.1002/anie.201905685
Direct Visualization of Single Nuclear Pore Complex Proteins Using Genetically‐Encoded Probes for DNA‐PAINTCited by: 74
Author(s): Thomas Schlichthaerle, Maximilian T. Strauss, Florian Schueder, Alexander Auer, Bianca Nijmeijer, Moritz Kueblbeck, Vilma Jimenez Sabinina, Jervis Vermal Thevathasan, Jonas Ries, Jan Ellenberg, Ralf Jungmann
Software Mentions: 1
Published: about 5 years ago
10.1002/anie.202012986
Self‐Regeneration and Self‐Healing in DNA Origami NanostructuresCited by: 17
Author(s): Michael Scheckenbach, Tom Schubert, Carsten Forthmann, Viktorija Glembockyte, Philip Tinnefeld
Software Mentions: 1
Published: almost 4 years ago
10.1186/1471-2202-14-S1-P110
Interactive visualization of brain-scale spiking activityCited by: 0
Author(s): Christian Nowke, Bernd Hentschel, Torsten Kuhlen, Maximilian Schmidt, Sacha van Albada, Jochen Martin Eppler, Rembrandt Bakker, Markus Diesmann
Software Mentions: 1
Published: over 11 years ago
10.1093/bioinformatics/btaa154
nanoTRON: a Picasso module for MLP-based classification of super-resolution dataCited by: 14
Author(s): Alexander Auer, Mike Strauss, Sebastian Strauss, Ralf Jungmann
Software Mentions: 1
Published: over 4 years ago
10.1155/2017/7956041
Cone Beam CT in Diagnosis and Surgical Planning of Dentigerous CystCited by: 8
Author(s): Naira Figueiredo Deana, Nilton Alves
Software Mentions: 1
Published: almost 8 years ago
10.3390/molecules23123165
Photo-Induced Depletion of Binding Sites in DNA-PAINT MicroscopyCited by: 40
Author(s): Philipp Blumhardt, Jeremy C. Stein, Jonas Mücksch, Florian Stehr, Julian Bauer, Ralf Jungmann, Petra Schwille
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0070759
Whose Mind Matters More—The Agent or the Artist? An Investigation of Ethical and Aesthetic EvaluationsCited by: 8
Author(s): Angelina Hawley-Dolan, Liane Young
Software Mentions: 1
Published: about 11 years ago
10.3390/cells8010048
Nanobody Detection of Standard Fluorescent Proteins Enables Multi-Target DNA-PAINT with High Resolution and Minimal Displacement ErrorsCited by: 50
Author(s): Shama Sograte‐Idrissi, Nazar Oleksiievets, Sebastian Isbaner, Mariana Eggert-Martinez, Jörg Enderlein, Roman Tsukanov, Felipe Opazo
Software Mentions: 1
Published: almost 6 years ago
10.1093/dnares/dsu033
Early and delayed long-term transcriptional changes and short-term transient responses during cold acclimation in olive leavesCited by: 50
Author(s): María de la O Leyva-Pérez, Antonio Valverde-Corredor, Raquel Valderrama, Jaime Jiménez-Ruiz, Antonio Muñoz‐Mérida, Oswaldo Trelles, Juan B. Barroso, Jesús Mercado‐Blanco, Francisco Luque
Software Mentions: 1
Published: about 10 years ago
10.3389/fpsyg.2014.00186
Expertise: defined, described, explainedCited by: 23
Author(s): Lyle E. Bourne, James A. Kole, Alice F. Healy
Software Mentions: 1
Published: over 10 years ago
10.1007/s40732-017-0228-1
A Behavioral and Biological Analysis of Aesthetics: Implications for Research and ApplicationsCited by: 23
Author(s): Francis Mechner
Software Mentions: 1
Published: over 7 years ago
10.3390/s20174808
Characterization, Statistical Analysis and Method Selection in the Two-Clocks Synchronization Problem for Pairwise Interconnected SensorsCited by: 0
Author(s): Juan‐Antonio Fernández‐Madrigal, Ángeles Navarro, Rafael Asenjo, Ana Cruz‐Martín
Software Mentions: 1
Published: about 4 years ago
10.1021/acsnano.0c10104
Clustering of Death Receptor for Apoptosis Using Nanoscale Patterns of PeptidesCited by: 45
Author(s): Yang Wang, Igor Baars, Ferenc Fördős, Björn Högberg
Software Mentions: 1
Published: over 3 years ago