pypi: Pathway | Projects | Ecosyste.ms: Papers

10.1186/1471-2164-9-S2-S16

Use artificial neural network to align biological ontologies
Cited by: 14
Author(s): Jingshan Huang, Jiangbo Dang, Michael N. Huhns, W. Jim Zheng
Software Mentions: 1
Published: about 16 years ago

Comparative genomic analyses of Mycoplasma hyopneumoniae pathogenic 168 strain and its high-passaged attenuated strain
Cited by: 43
Author(s): Wei Liu, Shaobo Xiao, Mao Li, Shaohua Guo, Sha Li, Rui Luo, Zhixin Feng, Bin Li, Zhemin Zhou, Guoqing Shao, Huanchun Chen, Liurong Fang
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2164-9-114

Comprehensive transcriptional profiling of prion infection in mouse models reveals networks of responsive genes
Cited by: 76
Author(s): Garrett Sorensen, Sarah J. Medina, Debra Parchaliuk, Clark Phillipson, Catherine Robertson, Stephanie A. Booth
Software Mentions: 1
Published: over 16 years ago

10.1186/s12864-017-4096-5

Identification of microRNAs controlling hepatic mRNA levels for metabolic genes during the metabolic transition from embryonic to posthatch development in the chicken
Cited by: 15
Author(s): Julie A. Hicks, Tom E. Porter, Hsiao‐Ching Liu
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-15-377

Gene bionetworks involved in the epigenetic transgenerational inheritance of altered mate preference: environmental epigenetics and evolutionary biology
Cited by: 27
Author(s): Michael K. Skinner, Marina I. Savenkova, Bin Zhang, Andrea C. Gore, David Crews
Software Mentions: 1
Published: almost 11 years ago

10.1186/1471-2164-12-585

Production of a reference transcriptome and transcriptomic database (PocilloporaBase) for the cauliflower coral, Pocillopora damicornis
Cited by: 68
Author(s): Nikki Traylor-Knowles, Brian R. Granger, Tristan Lubinski, Jignesh R. Parikh, Sara Garamszegi, Yu Xia, Jarrod A. Marto, Les Kaufman, John R. Finnerty
Software Mentions: 1
Published: almost 13 years ago

10.1186/1471-2164-9-156

Microarray analysis of E9.5 reduced folate carrier (RFC1; Slc19a1) knockout embryos reveals altered expression of genes in the cubilin-megalin multiligand endocytic receptor complex
Cited by: 27
Author(s): Janée Gelineau-van Waes, Joyce R. Maddox, Lynette M. Smith, Michael Van Waes, Justin Wilberding, James D. Eudy, L. Bauer, Richard H. Finnell
Software Mentions: 1
Published: almost 17 years ago

10.1186/s12864-016-2629-y

Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
Cited by: 47
Author(s): I-Min A. Chen, Victor Markowitz, Krishna Palaniappan, Ernest Szeto, Ken Chu, Jinghua Huang, Anna Ratner, Manoj Pillay, Michalis Hadjithomas, Marcel Huntemann, Natalia Mikhailova, Galina Ovchinnikova, Natalia Ivanova, Nikos C. Kyrpides
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2164-14-496

Gene bionetworks that regulate ovarian primordial follicle assembly
Cited by: 25
Author(s): Eric Nilsson, Bin Zhang, Michael K. Skinner
Software Mentions: 1
Published: over 11 years ago

10.1186/s12864-018-4818-3

Intragenic sequences in the trophectoderm harbour the greatest proportion of methylation errors in day 17 bovine conceptuses generated using assisted reproductive technologies
Cited by: 13
Author(s): Alan M. O’Doherty, Paul A. McGettigan, Rachelle E Irwin, David A. Magee, Dominic Gagné, Éric Fournier, Abdullah Al-Naib, Marc‐André Sirard, Colum P. Walsh, Claude Robert, Trudee Fair
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-9-146

Brain gene expression profiles of Cln1 and Cln5 deficient mice unravels common molecular pathways underlying neuronal degeneration in NCL diseases
Cited by: 51
Author(s): Carina von Schantz, Juha Saharinen, Outi Kopra, Jonathan D. Cooper, Massimiliano Gentile, Iiris Hovatta, Leena Peltonen, Anu Jalanko
Software Mentions: 1
Published: over 16 years ago

10.1186/1471-2164-7-70

An online database for brain disease research
Cited by: 107
Author(s): Brandon W. Higgs, Michael Elashoff, S. Richman, Beata M. Barci
Software Mentions: 1
Published: over 18 years ago

10.1186/1471-2164-14-557

Transcriptional analysis of abdominal fat in genetically fat and lean chickens reveals adipokines, lipogenic genes and a link between hemostasis and leanness
Cited by: 66
Author(s): Christopher Resnyk, Wilfrid Carré, Xiaofei Wang, Tom E. Porter, Jean Simon, Elisabeth Le Bihan‐Duval, M. J. Duclos, S. E. Aggrey, Larry A. Cogburn
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2164-15-509

The transcriptomic profile of peripheral blood nuclear cells in dogs with heart failure
Cited by: 10
Author(s): Magdalena Hulanicka, Magdalena Garncarz, Marta Parzeniecka-Jaworska, Michał Jank
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12864-015-2017-z

Virtual pathway explorer (viPEr) and pathway enrichment analysis tool (PEANuT): creating and analyzing focus networks to identify cross-talk between molecules and pathways
Cited by: 6
Author(s): Marius Garmhausen, Falko Hofmann, Viktor Senderov, Maria Thomas, Benjamin A. Kandel, Bianca Habermann
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-2164-13-S6-S18

Pathway Distiller - multisource biological pathway consolidation
Cited by: 13
Author(s): Mark Doderer, Zachry Anguiano, Uthra Suresh, Dashnamoorthy Ravi, Alexander J.R. Bishop, Yidong Chen
Software Mentions: 1
Published: about 12 years ago

10.1186/1471-2164-15-554

De novo transcriptome analysis of petal senescence in Gardenia jasminoides Ellis
Cited by: 43
Author(s): Georgios F. Tsanakas, Maria Manioudaki, A. S. Economou, Panagiotis Kalaitzis
Software Mentions: 1
Published: over 10 years ago

10.1186/s12864-018-4819-2

De novo sequencing, assembly and characterisation of Aloe vera transcriptome and analysis of expression profiles of genes related to saponin and anthraquinone metabolism
Cited by: 31
Author(s): Pragati Choudhri, Muniya Rani, Rajender S. Sangwan, Ravinder Kumar, Anil Kumar, Vinod Chhokar
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-015-1516-2

Integrated microRNA, mRNA, and protein expression profiling reveals microRNA regulatory networks in rat kidney treated with a carcinogenic dose of aristolochic acid
Cited by: 26
Author(s): Chi Kong Li, Taichun Qin, Kejian Wang, Michael Hackenberg, Jun Yan, Yuan Gao, Li‐Rong Yu, Leming Shi, Zhenqiang Su, Tao Chen
Software Mentions: 1
Published: over 9 years ago

10.1186/s12877-020-1453-z

The integrated care pathway for managing post stroke patients (iCaPPS©) in public primary care Healthcentres in Malaysia: impact on quality adjusted life years (QALYs) and cost effectiveness analysis
Cited by: 8
Author(s): Aznida Firzah Abdul Aziz, Nor Azlin Mohd Nordin, Amrizal Muhammad Nur, Saperi Sulong, Syed Mohamed Aljunid
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12913-019-4620-1

Secondary care usage and characteristics of hospital inpatients referred to a UK homeless health team: a retrospective service evaluation
Cited by: 11
Author(s): Hannah Field, Briony Hudson, Nigel Hewett, Zana Khan
Software Mentions: 1
Published: about 5 years ago

10.1186/s12913-014-0557-6

Evaluation of the implementation of the Montreal at home/chez soi project
Cited by: 9
Author(s): Marie‐Josée Fleury, Guy Grenier, Catherine Vallée
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12913-015-0825-0

Attitudes towards the use and acceptance of eHealth technologies: a case study of older adults living with chronic pain and implications for rural healthcare
Cited by: 112
Author(s): Margaret Currie, Lorna Jennifer Philip, Anne Roberts
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2172-11-51

The gastrointestinal nematode Trichostrongylus colubriformis down-regulates immune gene expression in migratory cells in afferent lymph
Cited by: 22
Author(s): Jacqueline S. Knight, David Baird, Wayne R. Hein, A. Pernthaner
Software Mentions: 1
Published: about 14 years ago

10.1186/s12881-015-0161-6

Tissue-specific patterns of gene expression in the epithelium and stroma of normal colon in healthy individuals in an aspirin intervention trial
Cited by: 17
Author(s): Sushma S. Thomas, Karen W. Makar, Lin Li, Yingye Zheng, Peiying Yang, Lisa Levy, Rebecca Yvonne Rudolph, Paul D. Lampe, Min Yan, Sanford D. Markowitz, Jeannette Bigler, Johanna W. Lampe, John D. Potter
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2350-11-64

Custom CGH array profiling of copy number variations (CNVs) on chromosome 6p21.32 (HLA locus) in patients with venous malformations associated with multiple sclerosis
Cited by: 19
Author(s): Alessandra Ferlini, Matteo Bovolenta, Marcella Neri, Francesca Gualandi, A Balboni, Anton Yuryev, Fabrizio Salvi, Donato Gemmati, A Liboni, Paolo Zamboni
Software Mentions: 1
Published: over 14 years ago

10.1186/1471-2350-15-2

Genome-wide association study of bipolar disorder in Canadian and UK populations corroborates disease loci including SYNE1 and CSMD1
Cited by: 96
Author(s): Wei Xu, Sarah Cohen‐Woods, Qian Chen, Abdul Noor, Jo Knight, Georgina M. Hosang, Sagar V. Parikh, Vincenzo De Luca, Federica Tozzi, Pierandrea Muglia, Julia Forte, Andrew McQuillin, Pingzhao Hu, Hugh Gurling, James L. Kennedy, Peter McGuffin, Anne Farmer, John S. Strauss, John B. Vincent
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12920-019-0482-y

Transcriptome profiling analysis reveals that CXCL2 is involved in anlotinib resistance in human lung cancer cells
Cited by: 24
Author(s): Jun Lü, Wei Xu, Jie Qian, Shuyuan Wang, Bo Zhang, Lele Zhang, Rong Qiao, Maoliang Hu, Yiming Zhao, Xiaodong Zhao, Baohui Han
Software Mentions: 1
Published: over 5 years ago

10.1186/1755-8794-2-67

DNA microarray profiling of genes differentially regulated by the histone deacetylase inhibitors vorinostat and LBH589 in colon cancer cell lines
Cited by: 86
Author(s): Melissa J. LaBonte, Peter M. Wilson, William Fazzone, Susan Groshen, Heinz‐Josef Lenz, Robert D. Ladner
Software Mentions: 1
Published: almost 15 years ago

10.1186/1755-8794-4-44

Modeling microRNA-mRNA Interactions Using PLS Regression in Human Colon Cancer
Cited by: 45
Author(s): Xiaohong Li, Ryan Gill, Nigel G. F. Cooper, Jae Keun Yoo, Susmita Datta
Software Mentions: 1
Published: over 13 years ago

10.1186/s12920-017-0258-1

Diet and exercise changes following direct-to-consumer personal genomic testing
Cited by: 24
Author(s): Daiva E. Nielsen, Deanna Alexis Carere, Catharine Wang, J. Scott Roberts, Robert C. Green
Software Mentions: 1
Published: over 7 years ago

10.1186/s12920-015-0159-0

Microarray analysis of Long non-coding RNA expression profiles in human gastric cells and tissues with Helicobacter pylori Infection
Cited by: 38
Author(s): Hong Zhu, Qiang Wang, Yizheng Yao, Jian Fang, Fengying Sun, Ying Ni, Yifei Shen, Hua Wang, Shihe Shao
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12920-014-0069-6

Heterogeneity analysis of the proteomes in clinically nonfunctional pituitary adenomas
Cited by: 29
Author(s): Xianquan Zhan, Xiaowei Wang, Ying Long, Dominic M. Desiderio
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12920-015-0140-y

The impact of direct-to-consumer personal genomic testing on perceived risk of breast, prostate, colorectal, and lung cancer: findings from the PGen study
Cited by: 17
Author(s): Deanna Alexis Carere, Tyler J. VanderWeele, Tanya A. Moreno, Joanna L. Mountain, J. Scott Roberts, Peter Kraft, Robert C. Green
Software Mentions: 1
Published: about 9 years ago

10.1186/s12911-016-0338-8

The eClinical Care Pathway Framework: a novel structure for creation of online complex clinical care pathways and its application in the management of sexually transmitted infections
Cited by: 16
Author(s): Jo Gibbs, L Sutcliffe, Gkatzidou, Kate Hone, RE Ashcroft, Emma Harding-Esch, C Lowndes, S Tariq Sadiq, Pam Sonnenberg, C Estcourt
Software Mentions: 1
Published: over 8 years ago

10.1186/s12868-018-0404-5

Metabolomics analysis of serum in a rat heroin self-administration model undergoing reinforcement based on 1H-nuclear magnetic resonance spectra
Cited by: 20
Author(s): Tingting Ning, Changlong Leng, Lin Chen, Baomiao Ma, Xiaokang Gong
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2202-12-40

The role of shear stress in Blood-Brain Barrier endothelial physiology
Cited by: 309
Author(s): Luca Cucullo, Mohammed Hossain, Vikram Puvenna, Nicola Marchi, Damir Janigro
Software Mentions: 1
Published: over 13 years ago

10.1186/s12886-018-0764-8

TLR4 modulates inflammatory gene targets in the retina during Bacillus cereus endophthalmitis
Cited by: 27
Author(s): Phillip S. Coburn, Frederick C. Miller, Austin L. LaGrow, Salai Madhumathi Parkunan, C. Blake Randall, Rachel L. Staats, Michelle C. Callegan
Software Mentions: 1
Published: over 6 years ago

10.1186/s12886-021-01903-9

A data-driven approach for the discovery of biomarkers associated with thyroid eye disease
Cited by: 0
Author(s): Huihui Zou, Weiwei Xu, Ying Wang, Zhihong Wang
Software Mentions: 1
Published: over 3 years ago

10.1186/1472-684X-13-5

The effect and process evaluations of the national quality improvement programme for palliative care: the study protocol
Cited by: 9
Author(s): Natasja Raijmakers, J. Hofstede, Ellen Jm de Nijs, Luc Deliens, Anneke L. Francké
Software Mentions: 1
Published: over 10 years ago

10.1186/s12904-018-0352-y

The Prognosis in Palliative care Study II (PiPS2): study protocol for a multi-centre, prospective, observational, cohort study
Cited by: 9
Author(s): Anastasia K. Kalpakidou, Chris Todd, Vaughan Keeley, Jane Griffiths, Karen Spencer, Victoria Vickerstaff, Rumana Omar, Patrick Stone
Software Mentions: 1
Published: over 6 years ago

10.1186/s12870-020-02786-6

Multi-responses of O-methyltransferase genes to salt stress and fiber development of Gossypium species
Cited by: 10
Author(s): Abdul Hafeez, Qún Gě, Qí Zhāng, Jùnwén Lǐ, Jǔwǔ Gōng, Ruìxián Liú, Yùzhēn Shí, Hǎihóng Shāng, Àiyīng Liú, Muhammad Sajid Iqbal, Xiǎoyīng Dèng, Abdul Razzaq, Muharam Ali, Yǒulù Yuán, Wànkuí Gǒng
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12870-018-1335-0

Effects of vitro sucrose on quality components of tea plants (Camellia sinensis) based on transcriptomic and metabolic analysis
Cited by: 26
Author(s): Yumei Qian, Shuxiang Zhang, Shengbo Yao, Jinxin Xia, Yanzhi Li, Xinlong Dai, Wenzhao Wang, Xiaolan Jiang, Yajun Li, Mingzhuo Li, Liping Gao, Tao Xia
Software Mentions: 1
Published: over 6 years ago

10.1186/s12870-018-1332-3

Re-analysis of long non-coding RNAs and prediction of circRNAs reveal their novel roles in susceptible tomato following TYLCV infection
Cited by: 68
Author(s): Jinyan Wang, Youxin Yang, Lamei Jin, Xitie Ling, Tingli Liu, Tianzi Chen, Yinghua Ji, Wenbao Yu, Baolong Zhang
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2393-7-S1-S4

Functional genomics of the pregnant uterus: from expectations to reality, a compilation of studies in the myometrium
Cited by: 21
Author(s): Michelle Breuiller-Fouché, Gilles Charpigny, Guy Germain
Software Mentions: 1
Published: over 17 years ago

10.1186/1471-2393-9-47

A case study evaluation of implementation of a care pathway to support normal birth in one English birth centre: anticipated benefits and unintended consequences
Cited by: 19
Author(s): Debra Bick, Jo Rycroft‐Malone, Marina Fontenla
Software Mentions: 1
Published: about 15 years ago

10.1186/s12919-016-0053-6

A variance component method for integrated pathway analysis of gene expression data
Cited by: 1
Author(s): Ellen E. Quillen, John Blangero, Laura Almasy
Software Mentions: 1
Published: about 8 years ago

10.1186/1753-6561-8-S6-S4

Identifying common components across biological network graphs using a bipartite data model
Cited by: 1
Author(s): Baker Ej, C Culpepper, C Philips, Jason A Bubier, Michael A. Langston, Elissa J. Chesler
Software Mentions: 1
Published: about 10 years ago

10.1186/s12888-018-1770-3

Outcomes of an integrated care pathway for concurrent major depressive and alcohol use disorders: a multisite prospective cohort study
Cited by: 10
Author(s): Andriy V. Samokhvalov, Charlotte Probst, Saima Awan, Tony P. George, Bernard Le Foll, Peter Voore, Jürgen Rehm
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2458-14-758

Overview of 71 European community-based initiatives against childhood obesity starting between 2005 and 2011: general characteristics and reported effects
Cited by: 15
Author(s): Wanda J. E. Bemelmans, Trudy M. A. Wijnhoven, Marieke Verschuuren, João Breda
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2482-12-S1-S13

The role of atherectomy in the treatment of lower extremity peripheral artery disease
Cited by: 37
Author(s): Anna Franzone, Marco Ferrone, Giuseppe Colella, Andreina Carbone, Laura Scudiero, Federica Serino, Fernando Scudiero, Raffaele Izzo, Raffaele Piccolo, Savio Saviano, Bruno Amato, Cinzia Perrino, Bruno Trimarco, Giovanni Esposito
Software Mentions: 1
Published: about 12 years ago

10.1186/1752-0509-9-S2-S2

ANDSystem: an Associative Network Discovery System for automated literature mining in the field of biology
Cited by: 49
Author(s): В. А. Иванисенко, Olga V. Saik, Nikita V. Ivanisenko, Evgeny S. Tiys, T. V. Ivanisenko, П. С. Деменков, Н. А. Колчанов
Software Mentions: 1
Published: almost 10 years ago

10.1186/1752-0509-3-73

An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules
Cited by: 56
Author(s): Huaxia Qin, Michael W.Y. Chan, Sandya Liyanarachchi, Curtis Balch, Dustin Potter, Irene J. Souriraj, Alfred S.L. Cheng, Francisco Agosto-Perez, Elena Nikonova, Pearlly S. Yan, Huey‐Jen Lin, Kenneth P. Nephew, Joel Saltz, Louise C. Showe, Tim Hui-Ming Huang, Ramana V. Davuluri
Software Mentions: 1
Published: over 15 years ago

10.1186/s12917-018-1633-7

Drug quality analysis of isometamidium chloride hydrochloride and diminazene diaceturate used for the treatment of African animal trypanosomosis in West Africa
Cited by: 11
Author(s): Zakaria Bengaly, Sèna Hervé Vitouley, Martin Bienvenu Somda, Zongo André, Assiongbon Têko-Agbo, Giuliano Cecchi, Yahaya Adam, Issa Sidibé, Bagora Bayala, Adrien Marie Gaston Bélem, Jan Van Den Abbeele, V. Delespaux
Software Mentions: 1
Published: about 6 years ago

10.1186/s12917-020-02505-1

Proteomic study of hypothalamus in pigs exposed to heat stress
Cited by: 7
Author(s): Tian-yue Yu, Yanhong Yong, Junyu Li, Biao Fang, Canying Hu, Lianyun Wu, Xiaoxi Liu, Zhichao Yu, Xingbin Ma, Yadnyavalkya Patil, Ravi Gooneratne, Xianghong Ju
Software Mentions: 1
Published: over 4 years ago

10.1093/bioinformatics/btx466

Using uncertainty to link and rank evidence from biomedical literature for model curation
Cited by: 25
Author(s): Chrysoula Zerva, Riza Theresa Batista-Navarro, Philip J. Day, Sophia Ananiadou
Software Mentions: 1
Published: over 7 years ago

10.1186/0717-6287-47-59

Proteomic analysis of the regenerating liver following 2/3 partial hepatectomy in rats
Cited by: 11
Author(s): Xiaoguang Chen, Chi Xu
Software Mentions: 1
Published: almost 11 years ago

10.1186/s13293-014-0019-1

Age and sex differences in kidney microRNA expression during the life span of F344 rats
Cited by: 42
Author(s): Joshua C. Kwekel, Vikrant Vijay, Varsha G. Desai, Carrie L. Moland, James C. Fuscoe
Software Mentions: 1
Published: almost 10 years ago

10.1186/2042-6410-2-2

The innate immune response to coxsackievirus B3 predicts progression to cardiovascular disease and heart failure in male mice
Cited by: 45
Author(s): Jennifer A. Onyimba, Michael Coronado, Amanda E. Garton, Joseph B. Kim, Adriana Bucek, Djahida Bedja, Kathleen L. Gabrielson, Tomás R. Guilarte, De Lisa Fairweather
Software Mentions: 1
Published: over 13 years ago

10.1155/2017/1809513

Epidermal Growth Factor Signaling towards Proliferation: Modeling and Logic Inference Using Forward and Backward Search
Cited by: 11
Author(s): Adrián Riesco, Beatriz Santos-Buitrago, Javier De Las Rivas, Merrill Knapp, Gustavo Santos‐García, Carolyn Talcott
Software Mentions: 1
Published: almost 8 years ago

10.1155/2017/9432460

Big Data and Network Biology 2016
Cited by: 1
Author(s): Shigehiko Kanaya, Md. Altaf-Ul-Amin, Samuel Kiboi, Farit Mochamad Afendi
Software Mentions: 1
Published: almost 8 years ago

10.3390/biom9080362

The Methodological Trends of Traditional Herbal Medicine Employing Network Pharmacology
Cited by: 97
Author(s): Won-Yung Lee, Choong-Yeol Lee, Youn-Sub Kim, Chang-Eop Kim
Software Mentions: 1
Published: over 5 years ago

10.3390/biom11050622

Functional Interfaces, Biological Pathways, and Regulations of Interferon-Related DNA Damage Resistance Signature (IRDS) Genes
Cited by: 16
Author(s): Monikaben Padariya, Alicja Sznarkowska, Sachin Kote, Maria Gómez-Herranz, Sara Mikac, Magdalena Pilch, Javier A. Alfaro, Robin Fåhræus, Ted R. Hupp, Umesh Kalathiya
Software Mentions: 1
Published: over 3 years ago

10.1042/BSR20203005

RNA-Seq analysis reveals critical transcriptome changes caused by sodium butyrate in DN mouse models
Cited by: 6
Author(s): Hansen Yang, Zheng Zhang, Rui Peng, Luyu Zhang, Handeng Liu, Xinyi Wang, Yiting Tian, Yan Sun
Software Mentions: 1
Published: over 3 years ago

10.1042/BSR20193996

HbA1c may contribute to the development of non-alcoholic fatty liver disease even at normal-range levels
Cited by: 19
Author(s): Changxi Chen, Zhongwei Zhu, Yu Mao, Yan Xu, Juan Du, Xiaoping Tang, Hongbao Cao
Software Mentions: 1
Published: almost 5 years ago

10.1042/BSR20191942

Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
Cited by: 16
Author(s): Dongbai Liu, Hongbao Cao, Kamil Can Kural, Qi Fang, Fuquan Zhang
Software Mentions: 1
Published: almost 5 years ago

10.1042/BSR20202387

Screening and validation of differentially expressed microRNAs and target genes in hypertensive mice induced by cytomegalovirus infection
Cited by: 5
Author(s): Yunzhong Shi, Dongmei Xi, XiaoNi Zhang, Zhen Huang, Na Tang, Yongmin Liu, Lamei Wang, Yan Tang, Hua Zhong, Fang He
Software Mentions: 1
Published: almost 4 years ago

10.1111/j.1365-2133.2011.10239.x

Noninvasive genomic detection of melanoma
Cited by: 91
Author(s): William Wachsman, Vera B. Morhenn, Tara J. Palmer, Lorraine Walls, Tissa Hata, James A. Zalla, Robert Scheinberg, Howard Sofen, Serena Mraz, Ken Gross, Harold Rabinovitz, David Polsky, Song Ho Chang
Software Mentions: 1
Published: over 13 years ago

10.1017/S000711451600324X

Characterisation of equine satellite cell transcriptomic profile response to<i>β</i>-hydroxy-<i>β</i>-methylbutyrate (HMB)
Cited by: 11
Author(s): Katarzyna Szczęśniak, Anna Ciecierska, Paweł Ostaszewski, Tomasz Sadkowski
Software Mentions: 1
Published: about 8 years ago

10.1186/bcr3561

Pubertal high fat diet: effects on mammary cancer development
Cited by: 40
Author(s): Yong Zhao, Ying Tan, Mark D. Aupperlee, Ingeborg M. Langohr, Erin L. Kirk, Melissa A. Troester, Richard C. Schwartz, Sandra Z. Haslam
Software Mentions: 1
Published: about 11 years ago

10.1186/s13058-017-0866-x

Maternal intake of high n-6 polyunsaturated fatty acid diet during pregnancy causes transgenerational increase in mammary cancer risk in mice
Cited by: 24
Author(s): Nguyen M. Nguyen, Fábia de Oliveira Andrade, Lü Jin, Xiyuan Zhang, Madisa B. Macon, M. Idalia Cruz, Carlos Benitez, Bryan Wehrenberg, Chao Yin, Xiao Wang, Jianhua Xuan, Sônia de Assis, Leena Hilakivi‐Clarke
Software Mentions: 1
Published: over 7 years ago

10.1186/bcr3666

Survivin family proteins as novel molecular determinants of doxorubicin resistance in organotypic human breast tumors
Cited by: 45
Author(s): Alice Faversani, Valentina Vaira, Giacomina P Moro, Delfina Tosi, Alessia Lopergolo, D. Schultz, Dayana B. Rivadeneira, Dario C. Altieri, Silvano Bòsari
Software Mentions: 1
Published: over 10 years ago

10.1007/s10549-019-05192-1

miR-106b-5p and miR-17-5p could predict recurrence and progression in breast ductal carcinoma in situ based on the transforming growth factor-beta pathway
Cited by: 19
Author(s): Jieun Lee, Hee Eun Kim, Youngseok Song, Eun Yoon Cho, Ahwon Lee
Software Mentions: 1
Published: over 5 years ago

10.1186/s42155-020-00175-6

An update on vessel preparation in lower limb arterial intervention
Cited by: 9
Author(s): William Ormiston, Shelagh Dyer-Hartnett, Rukshan Fernando, Andrew Holden
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12935-017-0476-9

Restoration of miR-29b exerts anti-cancer effects on glioblastoma
Cited by: 37
Author(s): Jaekyung Shin, Hyun Geun Shim, Tae-Young Hwang, Hyungsin Kim, Sung Ho Kang, Yun Sik Dho, Shin Young Park, Sang Jeong Kim
Software Mentions: 1
Published: about 7 years ago

10.1186/s12935-019-0850-x

Decreased SATB1 expression promotes AML cell proliferation through NF-κB activation
Cited by: 3
Author(s): Xiaodan Luo, Lihua Xu, Xiaohong Wu, Tan H, Lian Liu
Software Mentions: 1
Published: over 5 years ago

10.1186/s12935-019-0800-7

PITX2 enhances progression of lung adenocarcinoma by transcriptionally regulating WNT3A and activating Wnt/β-catenin signaling pathway
Cited by: 28
Author(s): Jing Luo, Yu Yao, Shunrong Ji, Qi Sun, Yang Xu, Kaichao Liu, Diao Quan-ping, Yong Qiang, Yi Shen
Software Mentions: 1
Published: over 5 years ago

10.1002/cam4.2063

Pard3 suppresses glioma invasion by regulating RhoA through atypical protein kinase C/NF‐κB signaling
Cited by: 13
Author(s): Junjun Li, Hao Xu, Qiangping Wang, Peng Fu, Tao Huang, Omarkhalil Anas, Hongyang Zhao, Nanxiang Xiong
Software Mentions: 1
Published: over 5 years ago

10.1186/s40170-019-0206-y

HIF1/2-exerted control over glycolytic gene expression is not functionally relevant for glycolysis in human leukemic stem/progenitor cells
Cited by: 29
Author(s): Albertus T. J. Wierenga, Alan Cunningham, Ayşegül Erdem, Nuria Vilaplana-Lopera, Annet Z. Brouwers-Vos, Maurien Pruis, André B. Mulder, Ulrich L. Günther, Joost H.A. Martens, Edo Vellenga, Jan Jacob Schuringa
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00270-017-1649-6

Debulking Atherectomy in the Peripheral Arteries: Is There a Role and What is the Evidence?
Cited by: 70
Author(s): Κωνσταντίνος Κατσάνος, Stavros Spiliοpoulos, Lazaros Reppas, Dimitris Karnabatidis
Software Mentions: 1
Published: over 7 years ago

10.1186/s12944-019-1046-z

Several circulating miRNAs related to hyperlipidemia and atherosclerotic cardiovascular diseases
Cited by: 23
Author(s): Jiang Xu, Zixuan Chen, Yingge Wang, Xiaohong Wang, Lu Chen, Tingting Yuan, Xiangming Tang, Yaoyao Lu, Hongmei Chen, Miaolei Chen, Zhiqiang Duan, Jianglin Fan, Jingyan Liang, Xinjiang Zhang
Software Mentions: 1
Published: over 5 years ago

10.1155/2015/942948

Kinetic Profiles of Inflammatory Mediators in the Conjunctival Sac Fluid of Patients upon Photorefractive Keratectomy
Cited by: 2
Author(s): Veronica Tisato, Paolo Perri, Erika Rimondi, Elisabetta Melloni, Giuseppe Lamberti, Daniela Milani, Paola Secchiero, Giorgio Zauli
Software Mentions: 1
Published: almost 10 years ago

10.1590/0074-02760200184

Prioritisation of potential drug targets against Bartonella bacilliformis by an integrative in-silico approach
Cited by: 7
Author(s): Mariella Farfán-López, Abraham Espinoza-Culupú, Ruth García-de-la-Guarda, Federico Serral, Ezequiel Sosa, María Mercedes Palomino, Darío Augusto Fernández Do Porto
Software Mentions: 1
Published: almost 5 years ago

10.3390/microorganisms8111656

Differential Analysis of Stress Tolerance and Transcriptome of Probiotic Lacticaseibacillus casei Zhang Produced from Solid-State (SSF-SW) and Liquid-State (LSF-MRS) Fermentations
Cited by: 8
Author(s): Pengyu Wu, Jinpeng An, Liang Chen, Qi Zhu, Yingjun Li, Yuxia Mei, Zhenmin Chen, Yunxiang Liang
Software Mentions: 1
Published: about 4 years ago

10.4061/2011/475718

Databases and Bioinformatics Tools for the Study of DNA Repair
Cited by: 5
Author(s): Kaja Milanowska, Kristian Rother, Janusz Bujnicki
Software Mentions: 1
Published: over 13 years ago

10.1186/1476-4598-9-319

PC3 prostate tumor-initiating cells with molecular profile FAM65Bhigh/MFI2low/LEF1low increase tumor angiogenesis
Cited by: 49
Author(s): Kexiong Zhang, David J. Waxman
Software Mentions: 1
Published: almost 15 years ago

10.3390/molecules22081272

Artesunate Activates the Intrinsic Apoptosis of HCT116 Cells through the Suppression of Fatty Acid Synthesis and the NF-κB Pathway
Cited by: 29
Author(s): Xiao Chen, Yin Kwan Wong, Teck Kwang Lim, Wonbong Lim, Qingsong Lin, Jigang Wang, Hua Zhang
Software Mentions: 1
Published: over 7 years ago

10.1002/mgg3.22

A new genome scan for primary nonsyndromic vesicoureteric reflux emphasizes high genetic heterogeneity and shows linkage and association with various genes already implicated in urinary tract development
Cited by: 22
Author(s): John M Darlow, Mark G Dobson, Rebecca Darlay, Cliona Molony, Manuela Hunziker, Andrew J. Green, Heather J. Cordell, Prem Puri, D. E. Barton
Software Mentions: 1
Published: over 11 years ago

10.1007/s12035-017-0477-7

Huntington Disease as a Neurodevelopmental Disorder and Early Signs of the Disease in Stem Cells
Cited by: 69
Author(s): Kalina Wiatr, Wojciech J. Szlachcic, Marta Trzeciak, Marek Figlerowicz, Maciej Figiel
Software Mentions: 1
Published: over 7 years ago

10.1038/mp.2014.188

Genetic contributions to variation in general cognitive function: a meta-analysis of genome-wide association studies in the CHARGE consortium (N=53 949)
Cited by: 313
Author(s): Gail Davies, Nicola J. Armstrong, Joshua C. Bis, Jan Bressler, Vincent Chouraki, Sudheer Giddaluru, Edith Hofer, Carla A. Ibrahim-Verbaas, Mirna Kirin, Jari Lahti, S. J. Van Der Lee, Stéphanie Le Hellard, T. Liu, Riccardo E. Marioni, Christopher Oldmeadow, Iris Postmus, Albert V. Smith, Jennifer A. Smith, Anbupalam Thalamuthu, Russell Thomson, Véronique Vitart, J. Wang, Lei Yu, Lina Zgaga, Wei Zhao, Ruth Boxall, Sarah E. Harris, W. David Hill, David C. Liewald, Michelle Luciano, Hieab H.H. Adams, David Ames, Najaf Amin, Philippe Amouyel, Amelia A. Assareh, Rhoda Au, James T. Becker, Alexa Beiser, Claudine Berr, Lars Bertram, Eric Boerwinkle, B. M. Buckley, Harry Campbell, Janie Corley, Philip L. De Jager, Carole Dufouil, Johan G. Eriksson, Thomas Espeseth, Jessica D. Faul, Ian Ford, Generation Scotland, R. F. Gottesman, Michael Griswold, Vilmundur Gudnason, Tamara B. Harris, Gerardo Heiss, Albert Hofman, Elizabeth G. Holliday, Jennifer E. Huffman, Sharon L.R. Kardia, Nicole A. Kochan, David S. Knopman, John B. Kwok, Jean‐Charles Lambert, T. Lee, G. Li, S. C. Li, Marisa Loitfelder, Oscar L. López, Astri J. Lundervold, Annamari Lundqvist, Karen A. Mather, Saira Saeed Mirza, Lars Nyberg, Ben A. Oostra, Aarno Palotie, Göran Papenberg, Alison Pattie, Katja Petrovic, Ozren Polašek, Bruce M. Psaty, Paul Redmond, Simone Reppermund, Jerome I. Rotter, Helena Schmidt, Maaike Schuur, Peter R. Schofield, Rodney J. Scott, Vidar M. Steen, David J. Stott, John van Swieten, Kent D. Taylor, Julian N. Trollor, Stella Trompet, André G. Uitterlinden, Galit Weinstein, Elisabeth Widén, B. Gwen Windham, J. Wouter Jukema, Alan F. Wright, Margaret J. Wright, Qiong Yang, Hélène Amieva, John Attia, David A. Bennett, Henry Brodaty, Anton J. M. de Craen, Caroline Hayward, M. Arfan Ikram, Ulman Lindenberger, Lars Göran Nilsson, David J. Porteous, Katri Räikkönen, Ivar Reinvang, Igor Rudan, Perminder S. Sachdev, Reinhold Schmidt, Peter R. Schofield, Velandai Srikanth, John M. Starr, Stephen T. Turner, David R. Weir, James F. Wilson, Cornelia M. van Duijn, Lenore J. Launer, A Fitzpatrick, Sudha Seshadri, TH Mosley, Ian J. Deary
Software Mentions: 1
Published: almost 10 years ago

10.1186/1297-9716-44-120

Pyroptosis and adaptive immunity mechanisms are promptly engendered in mesenteric lymph-nodes during pig infections with Salmonella enterica serovar Typhimurium
Cited by: 15
Author(s): Rodrigo Prado Martins, Carmen Aguilar, James E. Graham, Ana Carvajal, Rocío Bautista, M. Gonzalo Claros, Juan J. Garrido
Software Mentions: 1
Published: almost 11 years ago

10.1186/1743-422X-9-77

Screening and functional analysis of differentially expressed genes in EBV-transformed lymphoblasts
Cited by: 31
Author(s): Yongming Dai, Yunlian Tang, Fei He, Yang Zhang, Ailan Cheng, Runliang Gan, Yimou Wu
Software Mentions: 1
Published: over 12 years ago

10.1186/s12985-015-0288-2

Differential expression of miRNAs in enterovirus 71-infected cells
Cited by: 31
Author(s): Xianhong Meng, Chaofeng Ma, Qianqian Du, Yanhong Ji, Jiru Xu
Software Mentions: 1
Published: over 9 years ago

10.1186/s12985-018-0982-y

Pretreatment microRNA levels can predict HBsAg clearance in CHB patients treated with pegylated interferon α-2a
Cited by: 7
Author(s): Yanlin Yang, Ming Liu, Ying Deng, Yan Guo, Xuqing Zhang, Dongfang Xiang, Li Jiang, You Zhang, Yi Wu, Maoshi Li, Qing Mao
Software Mentions: 1
Published: over 6 years ago

10.3390/v12111299

Transcriptional Immune Signatures of Alveolar Macrophages and the Impact of the NLRP3 Inflammasome on Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Replication
Cited by: 2
Author(s): Julie A. Hicks, Dongwan Yoo, Hsiao‐Ching Liu
Software Mentions: 1
Published: about 4 years ago

10.5811/westjem.2017.12.36444

3 for the Price of 1: Teaching Chest Pain Risk Stratification in a Multidisciplinary, Problem-based Learning Workshop
Cited by: 2
Author(s): William D. Alley, Cynthia Burns, Nicholas Hartman, Kim Askew, Simon A. Mahler
Software Mentions: 1
Published: over 6 years ago

10.1186/s13071-016-1436-2

De novo transcriptomic analysis of the female and male adults of the blood fluke Schistosoma turkestanicum
Cited by: 12
Author(s): Guohua Li, Min-Jun Xu, Qiao‐Cheng Chang, Jinliang Gao, Chun-Ren Wang, Xing‐Quan Zhu
Software Mentions: 1
Published: over 8 years ago

10.1186/s13071-017-2093-9

Species-specific ecological niche modelling predicts different range contractions for Lutzomyia intermedia and a related vector of Leishmania braziliensis following climate change in South America
Cited by: 21
Author(s): Shannon McIntyre, Elizabeth Ferreira Rangel, P. D. Ready, Bruno Moreira de Carvalho
Software Mentions: 1
Published: over 7 years ago

10.3390/pathogens10080949

Identification of Toxocara canis Antigen-Interacting Partners by Yeast Two-Hybrid Assay and a Putative Mechanism of These Host–Parasite Interactions
Cited by: 3
Author(s): Ewa Długosz, Małgorzata Milewska, Piotr Bąska
Software Mentions: 1
Published: over 3 years ago

10.7717/peerj.3939

Comparative proteomics reveals that YK51, a 4-Hydroxypandurantin-A analogue, downregulates the expression of proteins associated with dengue virus infection
Cited by: 6
Author(s): Wei-Lian Tan, Yean Kee Lee, Yen Fong Ho, Rohana Yusof, Noorsaadah Abdul Rahman, Saiful Anuar Karsani
Software Mentions: 1
Published: almost 7 years ago

Projects: pypi: Pathway

Papers Mentioning Pathway 827