Ecosyste.ms: Papers

10.1371/journal.pone.0153680

Viral Evolved Inhibition Mechanism of the RNA Dependent Protein Kinase PKR's Kinase Domain, a Structural Perspective
Cited by: 4
Author(s): K. Hari Krishna, Yallamandayya Vadlamudi, Mithilesh Kumar
Software Mentions: 9
Published: over 8 years ago

10.1093/aobpla/plab018

Alpine speciation and morphological innovations: revelations from a species-rich genus in the northern hemisphere
Cited by: 5
Author(s): Yazhou Zhang, Jianguo Chen, Hang Sun
Software Mentions: 8
Published: over 3 years ago

10.7554/eLife.63270

Dissecting phenotypic transitions in metastatic disease via photoconversion-based isolation
Cited by: 4
Author(s): Yogev Sela, Jinyang Li, Paola Kuri, Allyson J. Merrell, Ning Li, Chris Lengner, Pantelis Rompolas, Ben Z. Stanger
Software Mentions: 6
Published: over 3 years ago

10.15252/embr.201846401

Inherent <scp>DNA</scp> ‐binding specificities of the <scp>HIF</scp> ‐1α and <scp>HIF</scp> ‐2α transcription factors in chromatin
Cited by: 128
Author(s): James Smythies, Min Sun, Norma Masson, Rafik Salama, Peter Simpson, Elizabeth R. Murray, Viviana K. Neumann, Matthew E. Cockman, Hani Choudhry, Peter J. Ratcliffe, David R. Mole
Software Mentions: 6
Published: about 6 years ago

10.15252/embj.2020106807

Cryo‐EM structure of native human uromodulin, a zona pellucida module polymer
Cited by: 24
Author(s): A. Stsiapanava, Chenrui Xu, Martina Brunati, Sara Zamora-Caballero, Céline Schaeffer, Marcel Bokhove, Ling Han, Hans Hebert, Marta Carroni, Shigeki Yasumasu, Luca Rampoldi, Bin Wu, Luca Jovine
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pone.0144147

The Independent Evolution Method Is Not a Viable Phylogenetic Comparative Method
Cited by: 3
Author(s): Rodger W. Griffin, Gabriel Yapuncich
Software Mentions: 5
Published: almost 9 years ago

10.3389/fpls.2017.00367

Gene Classification and Mining of Molecular Markers Useful in Red Clover (Trifolium pratense) Breeding
Cited by: 14
Author(s): Jan Ištvánek, Jana Dluhošová, Petr Dluhoš, Lenka Pátková, J. Nedĕlník, Jana Řepková
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0093873

CMT: A Constrained Multi-Level Thresholding Approach for ChIP-Seq Data Analysis
Cited by: 3
Author(s): Iman Rezaeian, Luis Rueda
Software Mentions: 4
Published: over 10 years ago

10.1371/journal.pone.0092257

Esterase LpEst1 from Lactobacillus plantarum: A Novel and Atypical Member of the αβ Hydrolase Superfamily of Enzymes
Cited by: 23
Author(s): Y. Álvarez, María Esteban-Torres, Álvaro Cortés-Cabrera, Federico Gago, I. Acebrón, R. Benavente, Karin Mardo, Blanca de las Rivas, Rosario Múñoz, José M. Mancheño
Software Mentions: 4
Published: over 10 years ago

10.3390/medsci7060074

In Silico Insights into HIV-1 Vpu-Tetherin Interactions and Its Mutational Counterparts
Cited by: 0
Author(s): P. Sneha, Urmi Shah, S. Balaji
Software Mentions: 3
Published: over 5 years ago

10.3390/s21124061

UAV-Based and WebRTC-Based Open Universal Framework to Monitor Urban and Industrial Areas
Cited by: 14
Author(s): Agnieszka Chodorek, Robert R. Chodorek, Paweł Sitek
Software Mentions: 3
Published: over 3 years ago

10.1186/1741-7007-10-60

A universal scaling relationship between body mass and proximal limb bone dimensions in quadrupedal terrestrial tetrapods
Cited by: 289
Author(s): Nicolás E. Campione, David C. Evans
Software Mentions: 3
Published: over 12 years ago

10.1093/jxb/eru266

Experimental and bioinformatic characterization of a recombinant polygalacturonase-inhibitor protein from pearl millet and its interaction with fungal polygalacturonases
Cited by: 8
Author(s): S. Prabhu, Ratna Singh, Stephan Kolkenbrock, Neerakkal Sujeeth, Nour Eddine El Gueddari, Bruno M. Moerschbacher, K. Ramachandra Kini, Martin Wagenknecht
Software Mentions: 3
Published: over 10 years ago

10.1038/s41598-019-45425-3

Superintense Laser-driven Ion Beam Analysis
Cited by: 25
Author(s): M. Passoni, Luca Fedeli, Francesco Mirani
Software Mentions: 3
Published: over 5 years ago

10.1107/S090744491301576X

Complex structure of type VI peptidoglycan muramidase effector and a cognate immunity protein
Cited by: 17
Author(s): Tianyu Wang, Jingjin Ding, Ying Zhang, Dacheng Wang, Wei Liu
Software Mentions: 3
Published: about 11 years ago

10.1098/rsta.2019.0056

Exascale applications: skin in the game
Cited by: 51
Author(s): Francis J. Alexander, Ann S. Almgren, John B. Bell, A. Bhattacharjee, Jacqueline Chen, P. Colella, David Daniel, Jack Deslippe, Lori Freitag Diachin, Erik W. Draeger, Anshu Dubey, Thom H. Dunning, Thomas M. Evans, Ian Foster, Marianne M. François, Timothy C. Germann, Mark S. Gordon, Salman Habib, Mahantesh Halappanavar, Steven P. Hamilton, William E. Hart, Zhenyu Huang, Aimee L. Hungerford, Daniel Kasen, Paul Kent, Tzanio Kolev, Douglas B. Kothe, A. S. Kronfeld, Ye Luo, Paul B. Mackenzie, David McCallen, O. E. Bronson Messer, Susan M. Mniszewski, Chris Oehmen, A. Perazzo, Danny Pérez, David F. Richards, William J. Rider, Robert N. Rieben, Kenneth J. Roche, A. Siegel, Michael Sprague, Carl I. Steefel, Rick Stevens, Madhava Syamlal, Mark A. Taylor, John A. Turner, Jean‐Luc Vay, Artur F Voter, Theresa L. Windus, Katherine Yelick
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-019-53899-4

PIC&amp;RUN: An integrated assay for the detection and retrieval of single viable circulating tumor cells
Cited by: 15
Author(s): Mohamed Kamal, Shahin Saremi, Rémi Klotz, Oihana Iriondo, Yonatan Amzaleg, Yvonne Chairez, Varsha Tulpule, Julie E. Lang, Irene Kang, Min Yu
Software Mentions: 3
Published: almost 5 years ago

10.1029/2018JA025711

How Accurately Can We Measure the Reconnection Rate <b><i>E</i></b>_{<b><i>M</i></b>} for the MMS Diffusion Region Event of 11 July 2017?
Cited by: 53
Author(s): K. J. Genestreti, Takuma Nakamura, R. Nakamura, R. E. Denton, R. B. Torbert, J. L. Burch, Ferdinand Plaschke, S. A. Fuselier, R. E. Ergun, B. L. Giles, C. T. Russell
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0022767

X-Ray Structure Reveals a New Class and Provides Insight into Evolution of Alkaline Phosphatases
Cited by: 18
Author(s): Subhash C. Bihani, Amit Kumar Das, Kayzad Nilgiriwala, Vishal Prashar, Michel Pirocchi, Shree Kumar Apte, Jean‐Luc Ferrer, M.V. Hosur
Software Mentions: 3
Published: over 13 years ago

10.1074/jbc.M114.627059

Neuronal Calcium Sensor-1 Binds the D2 Dopamine Receptor and G-protein-coupled Receptor Kinase 1 (GRK1) Peptides Using Different Modes of Interactions
Cited by: 25
Author(s): S. Pandalaneni, V. Karuppiah, Muhammad Saleem, Lee P. Haynes, Robert D. Burgoyne, Olga Mayans, Jeremy P. Derrick, Lu‐Yun Lian
Software Mentions: 3
Published: over 9 years ago

10.1186/s12985-015-0309-1

Crystal structure of the fibre head domain of bovine adenovirus 4, a ruminant atadenovirus
Cited by: 7
Author(s): Thanh H. Nguyen, Márton Z. Vidovszky, Mónika Z. Ballmann, Marta Sanz-Gaitero, Abhimanyu Singh, Balázs Harrach, Mária Benkő, Mark J. van Raaij
Software Mentions: 2
Published: over 9 years ago

10.1186/s13062-019-0232-2

Interface residues of transient protein-protein complexes have extensive intra-protein interactions apart from inter-protein interactions
Cited by: 24
Author(s): S Jayashree, Pavalam Murugavel, Ramanathan Sowdhamini, Narayanaswamy Srinivasan
Software Mentions: 2
Published: almost 6 years ago

10.3390/v12040387

The In Silico Prediction of Hotspot Residues that Contribute to the Structural Stability of Subunit Interfaces of a Picornavirus Capsid
Cited by: 2
Author(s): Nicole Upfold, Caroline Jane Ross, Özlem Tastan Bishop, Caroline Knox
Software Mentions: 2
Published: over 4 years ago

10.1186/s12575-020-00138-0

Mutational Analysis of Ocriplasmin to Reduce Proteolytic and Autolytic Activity in Pichia pastoris
Cited by: 3
Author(s): Roghayyeh Baghban, Safar Farajnia, Younes Ghasemi, Reyhaneh Hoseinpoor, Azam Safary, Mojtaba Mortazavi, Nosratollah Zarghami
Software Mentions: 2
Published: almost 4 years ago

10.1155/2014/583606

Structural Comparison, Substrate Specificity, and Inhibitor Binding of AGPase Small Subunit from Monocot and Dicot: Present Insight and Future Potential
Cited by: 9
Author(s): K. K. Sarma, Priyabrata Sen, Madhumita Barooah, Manabendra Dutta Choudhury, Shubhadeep Roychoudhury, Mahendra Kumar Modi
Software Mentions: 2
Published: almost 11 years ago

10.1038/s41419-020-2228-3

Two faces of bivalent domain regulate VEGFA responsiveness and angiogenesis
Cited by: 10
Author(s): Jiahuan Chen, Xiaodong Liang, Shasha Zhang, Shiyan Wang, Sara P. Garcia, Pengyi Yan, Huijing Yu, Zixuan Li, Li Liu, Fang Zhang, Weiting Wei, Le Han, Yan Zhang, Guo‐Cheng Yuan, Sun Chen, Yingwei Chen, Sun Kim, William T. Pu, Bing Zhang
Software Mentions: 2
Published: almost 5 years ago

10.22074/cellj.2020.7011

hsa-miR-423 rs6505162 Is Associated with The Increased Risk of Breast Cancer in Isfahan Central Province of Iran.
Cited by: 6
Author(s): Nadia Pourmoshir, Gholamreza Motalleb, Sadeq Vallian
Software Mentions: 2
Published: over 4 years ago

10.3390/diagnostics11010061

PIC-GAN: A Parallel Imaging Coupled Generative Adversarial Network for Accelerated Multi-Channel MRI Reconstruction
Cited by: 31
Author(s): Jun Lyu, Chengyan Wang, Guang Yang
Software Mentions: 2
Published: almost 4 years ago

10.1007/s11214-019-0599-5

Explosive Magnetotail Activity
Cited by: 70
Author(s): M. I. Sitnov, J. Birn, Banafsheh Ferdousi, E. Gordeev, Yuri V. Khotyaintsev, V. G. Merkin, T. Motoba, A. Otto, E. V. Panov, P. L. Pritchett, Fulvia Pucci, J. Raeder, A. Runov, В. А. Сергеев, M. Velli, Xuzhi Zhou
Software Mentions: 2
Published: over 5 years ago

10.1107/S2052252521000452

Structural and functional analysis of the <i>Klebsiella pneumoniae</i> MazEF toxin–antitoxin system
Cited by: 3
Author(s): Chun Jin, Sung-Min Kang, Do-Hee Kim, Bong-Jin Lee
Software Mentions: 2
Published: over 3 years ago

10.1186/1754-6834-7-3

Determinants for the improved thermostability of a mesophilic family 11 xylanase predicted by computational methods
Cited by: 47
Author(s): Huimin Zhang, Jianfang Li, Junqing Wang, Yongjian Yang, Minchen Wu
Software Mentions: 2
Published: almost 11 years ago

10.1029/2019JA027410

Comparative Analysis of the Vlasiator Simulations and MMS Observations of Multiple X‐Line Reconnection and Flux Transfer Events
Cited by: 15
Author(s): Mojtaba Akhavan‐Tafti, Minna Palmroth, J. A. Slavin, Markus Battarbee, Urs Ganse, Maxime Grandin, G. Le, D. J. Gershman, J. P. Eastwood, J. E. Stawarz
Software Mentions: 2
Published: over 4 years ago

10.3389/fmolb.2016.00065

Effects of a Mutation in the HSPE1 Gene Encoding the Mitochondrial Co-chaperonin HSP10 and Its Potential Association with a Neurological and Developmental Disorder
Cited by: 34
Author(s): Anne Sigaard Bie, Paula Fernández‐Guerra, Rune Isak Dupont Birkler, Shahar Nisemblat, Dita Pelnēna, Xiaoyong Lu, Joshua L. Deignan, Hane Lee, Naghmeh Dorrani, Thomas J. Corydon, Johan Palmfeldt, Liga Bivina, Abdussalam Azem, Kristin Herman, Peter Bross
Software Mentions: 2
Published: about 8 years ago

10.22037/ijpr.2019.1100646

Characterization of Novel Fragment Antibodies Against TNF-alpha Isolated Using Phage Display Technique.
Cited by: 2
Author(s): Ali Akbar Alizadeha, Maryam Hamzeh‐Mivehroud, Elnaz Haddad, Nazanin Haddad, Mehdi Sharifi, Samaneh Mohammadi, Samira Pourtaghi‐Anvarian, Siavoush Dastmalchi
Software Mentions: 2
Published: almost 6 years ago

10.1107/S2059798320005355

Structural analysis of the PATZ1 BTB domain homodimer
Cited by: 4
Author(s): Sofia Piepoli, Aaron Alt, Canan Atılgan, Erika J. Mancini, Batu Erman
Software Mentions: 2
Published: over 4 years ago

10.3390/ijms21218066

Alpha-Carbonic Anhydrases from Hydrothermal Vent Sources as Potential Carbon Dioxide Sequestration Agents: In Silico Sequence, Structure and Dynamics Analyses
Cited by: 6
Author(s): Colleen Varaidzo Manyumwa, Reza Zolfaghari Emameh, Özlem Tastan Bishop
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pcbi.1003022

Ab Initio Modeling and Experimental Assessment of Janus Kinase 2 (JAK2) Kinase-Pseudokinase Complex Structure
Cited by: 11
Author(s): Xin Wan, Yue Ma, Christopher L. McClendon, Lily Huang, Niu Huang
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-017-17498-5

Burst intensification by singularity emitting radiation in multi-stream flows
Cited by: 26
Author(s): Alexander S. Pirozhkov, Timur Zh. Esirkepov, T. A. Pikuz, A. Ya. Faenov, Koichi Ogura, Yukio Hayashi, Hajime Kotaki, Е. Н. Рагозин, D. Neely, Hiromitsu Kiriyama, James Koga, Yuji Fukuda, A. Sagisaka, Masaharu Nishikino, Takashi Imazono, Noboru Hasegawa, Tetsuya Kawachi, Paul R. Bolton, Hiroyuki Daido, Yoshiaki Kato, Kotaro Kondo, Sergei V. Bulanov, M. Kando
Software Mentions: 2
Published: almost 7 years ago

10.1098/rsob.200300

Cellular sociology regulates the hierarchical spatial patterning and organization of cells in organisms
Cited by: 5
Author(s): Shambavi Ganesh, Beliz Utebay, Jeremy J Heit, Ahmet F. Coşkun
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12888-020-02990-6

Barriers to monitoring and management of cardiovascular and metabolic health of patients prescribed antipsychotic drugs: a systematic review
Cited by: 10
Author(s): Ruba Azfr Ali, Zahraa Jalal, Vibhu Paudyal
Software Mentions: 2
Published: almost 4 years ago

10.3389/fpubh.2017.00327

Data Sharing: Convert Challenges into Opportunities
Cited by: 47
Author(s): Ana Sofia Figueiredo
Software Mentions: 2
Published: almost 7 years ago

10.3390/medicina55090531

The Extent of Extemporaneous Preparation and Regulatory Framework of Extemporaneous Compounding in Latvia
Cited by: 3
Author(s): Olga Kiseļova, Baiba Mauriņa, Venta Šidlovska, Jānis Zvejnieks
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-24212-6

Prediction of spacer-α6 complex: a novel insight into binding of ADAMTS13 with A2 domain of von Willebrand factor under forces
Cited by: 8
Author(s): Xiang Fang, Jiangguo Lin, Ying Fang, Jianhua Wu
Software Mentions: 2
Published: over 6 years ago

10.1016/j.ymeth.2019.03.009

Role of integrative structural biology in understanding transcriptional initiation
Cited by: 10
Author(s): Michael J. Trnka, Riccardo Pellarin, Philip J. Robinson
Software Mentions: 2
Published: over 5 years ago

10.1186/gb-2008-9-5-r87

Sequence-based prediction of protein-protein interactions by means of codon usage
Cited by: 73
Author(s): Hamed S. Najafabadi, Reza Salavati
Software Mentions: 2
Published: almost 17 years ago

10.1186/s13059-018-1499-9

Origin of exon skipping-rich transcriptomes in animals driven by evolution of gene architecture
Cited by: 59
Author(s): Xavier Grau‐Bové, Iñaki Ruiz‐Trillo, Manuel Irimia
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0040080

Evolutionary Association of Stomatal Traits with Leaf Vein Density in Paphiopedilum, Orchidaceae
Cited by: 63
Author(s): Shi‐Bao Zhang, Zhen Guan, Mintao Sun, Juan Juan Zhang, Kun‐Fang Cao, Hu Hong
Software Mentions: 2
Published: over 12 years ago

10.1186/s12934-018-1012-x

Enhanced trypsin thermostability in Pichia pastoris through truncating the flexible region
Cited by: 18
Author(s): Lin Liu, Haoran Yu, Kun Du, Zhiyan Wang, Yiru Gan, He Huang
Software Mentions: 2
Published: about 6 years ago

10.1074/jbc.M117.782433

Immunoglobulin domain interface exchange as a platform technology for the generation of Fc heterodimers and bispecific antibodies
Cited by: 31
Author(s): Darko Skegro, Cian Stutz, Romain Ollier, Emelie Svensson, Paul Wassmann, Florence Bourquin, Thierry Monney, Sunitha Gn, Stanislas Blein
Software Mentions: 2
Published: over 7 years ago

10.1074/jbc.RA119.012335

A single mutation increases heavy-chain heterodimer assembly of bispecific antibodies by inducing structural disorder in one homodimer species
Cited by: 6
Author(s): Cian Stutz, Stanislas Blein
Software Mentions: 2
Published: over 4 years ago

10.1155/2016/8683713

Structural Stability, Transitions, and Interactions within SoxYZCD-Thiosulphate from Sulfurimonas denitrificans: An In Silico Molecular Outlook for Maintaining Environmental Sulphur Cycle
Cited by: 1
Author(s): Sujay Ray, Arundhati Banerjee
Software Mentions: 2
Published: about 8 years ago

10.1186/2049-2618-2-11

CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction
Cited by: 207
Author(s): Florent E. Angly, Paul G. Dennis, Adam Skarshewski, Inka Vanwonterghem, Philip Hugenholtz, Gene W. Tyson
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2148-9-148

Friend or foe? Evolutionary history of glycoside hydrolase family 32 genes encoding for sucrolytic activity in fungi and its implications for plant-fungal symbioses
Cited by: 81
Author(s): Jeri Lynn Parrent, Timothy Y. James, Rimvydas Vasaitis, Andrew Taylor
Software Mentions: 2
Published: almost 16 years ago

10.3390/molecules26030707

Computational Analysis of Thermal Adaptation in Extremophilic Chitinases: The Achilles’ Heel in Protein Structure and Industrial Utilization
Cited by: 1
Author(s): Dale L. Ang, Mubasher Zahir Hoque, Mian Bazle Hossain, Gea Guerriero, Roberto Berni, Jean-François Hausman, Syed Ali Imran Bokhari, Wallace Bridge, Khawar Sohail Siddiqui
Software Mentions: 2
Published: almost 4 years ago

10.3390/molecules25030690

Parallel Strategy Increases the Thermostability and Activity of Glutamate Decarboxylase
Cited by: 6
Author(s): Zhang Qingfei, Sheng Hu, Zhao Wang, Jun Huang, Jiaqi Mei, Lehe Mei
Software Mentions: 2
Published: almost 5 years ago

10.1038/sdata.2016.96

A database of human exposomes and phenomes from the US National Health and Nutrition Examination Survey
Cited by: 75
Author(s): Chirag Patel, Nam Pho, Michael McDuffie, Jeremy R. Easton-Marks, Cartik R. Kothari, Isaac S. Kohane, Paul Avillach
Software Mentions: 2
Published: about 8 years ago

10.1186/s12862-017-1067-z

The complete chloroplast genome of Primulina and two novel strategies for development of high polymorphic loci for population genetic and phylogenetic studies
Cited by: 18
Author(s): Chao Feng, Meizhen Xu, Feng Chen, Eric J. B. von Wettberg, Ming Kang
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0094335

Assessing Trait Covariation and Morphological Integration on Phylogenies Using Evolutionary Covariance Matrices
Cited by: 158
Author(s): Dean C. Adams, Ryan N. Felice
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2164-15-S1-S1

An improved ChIP-seq peak detection system for simultaneously identifying post-translational modified transcription factors by combinatorial fusion, using SUMOylation as an example
Cited by: 17
Author(s): Chia Yang Cheng, Chia Han Chu, Hung Wei Hsu, Fang‐Rong Hsu, Chung Yi Tang, Wen-Ching Wang, Hsing Jien Kung, Pei Ching Chang
Software Mentions: 2
Published: almost 11 years ago

10.3390/genes12040595

Microsatellite DNA Analysis for Diversity Study, Individual Identification and Parentage Control in Pig Breeds in Poland
Cited by: 6
Author(s): Anna Radko, Grzegorz Smołucha, Anna Koseniuk
Software Mentions: 1
Published: over 3 years ago

10.1029/2020GL088227

Ballooning‐Interchange Instability in the Near‐Earth Plasma Sheet and Auroral Beads: Global Magnetospheric Modeling at the Limit of the MHD Approximation
Cited by: 49
Author(s): Kareem Sorathia, V. G. Merkin, E. V. Panov, Binzheng Zhang, J. G. Lyon, J. Garretson, A. Y. Ukhorskiy, S. Ohtani, M. I. Sitnov, M. J. Wiltberger
Software Mentions: 1
Published: over 4 years ago

10.1111/hex.12614

Measuring recall of medical information in non-English-speaking people with cancer: A methodology
Cited by: 11
Author(s): Ruby Lipson-Smith, Amelia Hyatt, Alexandra Murray, Phyllis Butow, Thomas F. Hack, Michael Jefford, Uldis Ozoliņš, Sandra Hale, Penelope Schofield
Software Mentions: 1
Published: about 7 years ago

10.1016/j.heliyon.2021.e05923

In silico validation of potent phytochemical orientin as inhibitor of SARS-CoV-2 spike and host cell receptor GRP78 binding
Cited by: 8
Author(s): Arijit Bhowmik, Souradeep Biswas, Subhadip Hajra, Prosenjit Saha
Software Mentions: 1
Published: almost 4 years ago

10.1001/jamanetworkopen.2020.14736

Incidence, Distribution, and Lethality of Firearm Injuries in California From 2005 to 2015
Cited by: 12
Author(s): Sarabeth A. Spitzer, Veronica A. Pear, Christopher D. McCort, Garen J. Wintemute
Software Mentions: 1
Published: about 4 years ago

10.1002/jctb.5595

Mathematical modelling of expanded bed adsorption - a perspective on <i>in silico</i> process design
Cited by: 9
Author(s): Victor Koppejan, Guilherme N. M. Ferreira, Dong Lin, Marcel Ottens
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.ppat.1003364

Structural Basis of HCV Neutralization by Human Monoclonal Antibodies Resistant to Viral Neutralization Escape
Cited by: 83
Author(s): Thomas Krey, Annalisa Meola, Zhen–Yong Keck, Laurence Damier-Piolle, Steven K. H. Foung, F.A. Rey
Software Mentions: 1
Published: over 11 years ago

10.3390/polym12020390

Clinically Relevant Insulin Degludec and Its Interaction with Polysaccharides: A Biophysical Examination
Cited by: 0
Author(s): Shahwar I. Jiwani, Sheng Chieh Huang, Oritsegidenene Beji, Philemon Gyasi-Antwi, Richard B. Gillis, Gary G. Adams
Software Mentions: 1
Published: almost 5 years ago

10.1590/1518-8345.3162.3277

Integrative and complementary practices in Primary Care: unveiling health promotion
Cited by: 15
Author(s): Indiara Sartori Dalmolin, Ivonete Teresinha Schülter Buss Heidemann
Software Mentions: 1
Published: almost 5 years ago

10.1007/s41614-020-00048-4

Behavior of compressed plasmas in magnetic fields
Cited by: 5
Author(s): G. Ganguli, Chris Crabtree, Alex Fletcher, Bill Amatucci
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41597-020-0355-4

PIC, a paediatric-specific intensive care database
Cited by: 43
Author(s): Xian Zeng, Gang Yu, Yang Lu, Linhua Tan, Xiujing Wu, Shanshan Shi, Huilong Duan, Qiang Shu, Haomin Li
Software Mentions: 1
Published: almost 5 years ago

10.1038/srep11930

Preferential enhancement of laser-driven carbon ion acceleration from optimized nanostructured surfaces
Cited by: 18
Author(s): Malay Dalui, Weimin Wang, T. Madhu Trivikram, Sreemoyee Sarkar, Sheroy Tata, J. Jha, Pushan Ayyub, Zheng-Ming Sheng, M. Krishnamurthy
Software Mentions: 1
Published: over 9 years ago

10.1038/srep13968

High e+/e− Ratio Dense Pair Creation with 1021W.cm−2 Laser Irradiating Solid Targets
Cited by: 55
Author(s): Edison Liang, Taylor Clarke, Alexander Henderson, Weiqi Fu, Wen Jui Lo, Donald C. Taylor, Petr Chaguine, Siyang Zhou, Ye Hua, Xiao Cen, X. Wang, Jeremy Kao, Hannah Hasson, G. Dyer, Kristina Serratto, Nathan Riley, M. Donovan, T. Ditmire
Software Mentions: 1
Published: about 9 years ago

10.1038/srep14239

Envelope solitary waves exist and collide head-on without phase shift in a dusty plasma
Cited by: 21
Author(s): Heng Zhang, Xin Qi, Wen-Shan Duan, Lei Yang
Software Mentions: 1
Published: about 9 years ago

10.1038/srep14480

The heptad repeat region is a major selection target in MERS-CoV and related coronaviruses
Cited by: 46
Author(s): Diego Forni, Giulia Filippi, Rachele Cagliani, Luca De Gioia, Diego Forni, Nasser Al‐Daghri, Mario Clerici, Manuela Sironi
Software Mentions: 1
Published: about 9 years ago

10.1038/srep15499

Dense Helical Electron Bunch Generation in Near-Critical Density Plasmas with Ultrarelativistic Laser Intensities
Cited by: 34
Author(s): Ronghao Hu, Bin Liu, Haijiao Lu, Mingyang Zhou, Chen Lin, Zheng-Ming Sheng, Chia‐erh Chen, X. T. He, Xueqing Yan
Software Mentions: 1
Published: about 9 years ago

10.1038/srep16755

Compression of X-ray Free Electron Laser Pulses to Attosecond Duration
Cited by: 19
Author(s): James Sadler, Ricky Nathvani, Piotr Oleśkiewicz, Luke Ceurvorst, Naren Ratan, Muhammad Kasim, R. M. G. M. Trines, R. Bingham, P. Norreys
Software Mentions: 1
Published: about 9 years ago

10.1038/srep21214

Head-on collision and overtaking collision between an envelope solitary wave and a KdV solitary wave in a dusty plasma
Cited by: 11
Author(s): Heng Zhang, Wen-Shan Duan, Xin Qi, Lei Yang
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep22150

Dense blocks of energetic ions driven by multi-petawatt lasers
Cited by: 27
Author(s): Shangkun Weng, M. Liu, Zheng-Ming Sheng, M. Murakami, Min Chen, Linpeng Yu, J. Zhang
Software Mentions: 1
Published: over 8 years ago

10.1038/srep26743

Terahertz radiation driven by two-color laser pulses at near-relativistic intensities: Competition between photoionization and wakefield effects
Cited by: 30
Author(s): Pedro González Martínez, Xavier Davoine, A. Debayle, L. Grémillet, Luc Bergé
Software Mentions: 1
Published: over 8 years ago

10.1038/srep27592

Distinct characteristics of asymmetric magnetic reconnections: Observational results from the exhaust region at the dayside magnetopause
Cited by: 5
Author(s): Y. C. Zhang
Software Mentions: 1
Published: over 8 years ago

10.1038/srep28263

Relativistic-microwave theory of ball lightning
Cited by: 26
Author(s): Hui‐Chun Wu
Software Mentions: 1
Published: over 8 years ago

10.1038/srep32041

Experiment and simulation of novel liquid crystal plasma mirrors for high contrast, intense laser pulses
Cited by: 28
Author(s): Patrick Poole, A. Krygier, Ginevra Cochran, P. S. Foster, Graeme Scott, L. A. Wilson, James Bailey, Nicolas Bourgeois, C. Hernandez–Gomez, D. Neely, P. P. Rajeev, R. R. Freeman, Douglass Schumacher
Software Mentions: 1
Published: about 8 years ago

10.1038/srep32567

Violation of the transit-time limit toward generation of ultrashort electron bunches with controlled velocity chirp
Cited by: 6
Author(s): Seok-Gy Jeon, Dongwon Shin, Min Sup Hur
Software Mentions: 1
Published: about 8 years ago

10.1038/srep40058

Aligned copper nanorod arrays for highly efficient generation of intense ultra-broadband THz pulses
Cited by: 29
Author(s): Sudipta Mondal, Qingyi Wei, Waverly W. Ding, Hassan A. Hafez, M. A. Fareed, Antoine Laramée, X. Ropagnol, G. Zhang, Shuhui Sun, Z. M. Sheng, J. Zhang, T. Ozaki
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep40034

Increased impedance near cut-off in plasma-like media leading to emission of high-power, narrow-bandwidth radiation
Cited by: 6
Author(s): Min Sup Hur, Bernhard Ersfeld, Adam Noble, Hyyong Suk, D. A. Jaroszynski
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep42343

Structural variability of E. coli thioredoxin captured in the crystal structures of single-point mutants
Cited by: 10
Author(s): Martín Ezequiel Noguera, Diego S. Vazquez, Gerardo Ferrer-Sueta, William A. Agudelo, Eduardo Howard, Rodolfo M. Rasia, Bruno Manta, A. Cousido-Siah, A. Mitschler, A. Podjarny, Javier Santos
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-017-01677-5

Transition from Coherent to Stochastic electron heating in ultrashort relativistic laser interaction with structured targets
Cited by: 27
Author(s): G. Cristoforetti, P. Londrillo, Prashant Kumar Singh, F. Baffigi, Giuseppe D’Arrigo, Amit D. Lad, Giovanni Milazzo, Amitava Adak, Moniruzzaman Shaikh, Deep Sarkar, Gourab Chatterjee, J. Jha, M. Krishnamurthy, G. Ravindra Kumar, L. A. Gizzi
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-08470-4

Formation of side discharges in dielectric barrier discharge
Cited by: 8
Author(s): Weili Fan, Zheng-Ming Sheng, Lifang Dong, Fucheng Liu, Xia Zhong, Yiqian Cui, Hao Fu, Tian Du
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-15449-8

Acceleration of collimated 45 MeV protons by collisionless shocks driven in low-density, large-scale gradient plasmas by a 1020 W/cm2, 1 µm laser
Cited by: 21
Author(s): P. Antici, Elisabetta Boella, Sophia Chen, David Andrews, M. Barberio, J. Böker, F. Cardelli, J.‐L. Feugeas, M. Glesser, Ph. Nicolaï, L. Romagnani, M. Scisciò, M. Starodubtsev, O. Willi, Jean‐Claude Kieffer, V. T. Tikhonchuk, H. Pépin, L.O. Silva, E. D 'humières, Julien Fuchs
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-017-17605-6

Ultra-bright γ-ray emission and dense positron production from two laser-driven colliding foils
Cited by: 25
Author(s): Han-Zhen Li, Tong-Pu Yu, Jin-Jin Liu, Yan Yin, Xing-Long Zhu, R. Capdessus, Ф. Пегораро, Zheng-Ming Sheng, P. McKenna, F. Q. Shao
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-017-18740-w

Continuous-wave Y-band planar BWO with wide tunable bandwidth
Cited by: 30
Author(s): Hongzhu Xi, Jianguo Wang, Zhaochang He, Gang Zhu, Yue Wang, Hao Wang, Zaigao Chen, Rong Li, Luwei Liu
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-017-18712-0

Laboratory Study on Disconnection Events in Comets
Cited by: 1
Author(s): Yan Fei Li, Yu Tong Li, Weimin Wang, Ding Yuan, Bao Jun Zhu, Jiajun Zhong, Hui Wei, Fang Li, Bo Han, Kai Zhang, Xiao Xing Pei, Zhe Zhang, Jingna Zhao, Chang Liu, G. Q. Liao, Zhi Heng Fang, Chen Wang, Xiao Gang Wang, Y. Sakawa, Yong Joo Rhee, Xin Lu, Neng Hua, Bao Qiang Zhu, T. Morita, Yasuhiro Kuramitsu, Xiaoxia Huang, Si Zu Fu, Jingwei Zhu, Gang Zhao, Jie Zhang
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-20745-y

Extreme plasma states in laser-governed vacuum breakdown
Cited by: 28
Author(s): Evgeny Efimenko, A. V. Bashinov, Sergei Bastrakov, Arkady Gonoskov, A. A. Muraviev, Iosif B. Meyerov, A. V. Kim, A. Sergeev
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-21711-4

Ultrafast evolution of electric fields from high-intensity laser-matter interactions
Cited by: 15
Author(s): R. Pompili, M. P. Anania, F. Bisesto, M. Botton, E. Chiadroni, A. Cianchi, A. Curcio, M. Ferrario, Mario Galletti, Z. Henis, M. Petrarca, E. Schleifer, A. Zigler
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-22487-3

Impact of the pulse contrast ratio on molybdenum Kα generation by ultrahigh intensity femtosecond laser solid interaction
Cited by: 23
Author(s): Yasmina Azamoum, V. Tcheremiskine, R. Clady, A. Ferré, L. Charmasson, O. Utéza, M. Sentís
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-24930-x

Unexpected impact of radiation friction: enhancing production of longitudinal plasma waves
Cited by: 14
Author(s): E. G. Gelfer, N. V. Elkina, A. M. Fedotov
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-25466-w

A megawatt-level surface wave oscillator in Y-band with large oversized structure driven by annular relativistic electron beam
Cited by: 39
Author(s): Jianguo Wang, Guangqiang Wang, Dongyang Wang, Shuang Li, Peng Zeng
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-25594-3

Generation of ultrahigh field by micro-bubble implosion
Cited by: 10
Author(s): M. Murakami, Alexey Arefiev, M. A. Zosa
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-26785-8

QED cascade saturation in extreme high fields
Cited by: 27
Author(s): Wen Luo, Weiyuan Liu, Tao Yuan, Min Chen, Jingyi Yu, Fei-Yu Li, Dario Del Sorbo, C. P. Ridgers, Z. M. Sheng
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-27665-x

Ion energy spectra directly measured in the interaction volume of intense laser pulses with clustered plasma
Cited by: 9
Author(s): S. G. Bochkarev, A. Ya. Faenov, T. A. Pikuz, A. V. Brantov, V. F. Kovalev, I. Yu. Skobelev, S. A. Pikuz, R. Kodama, Konstantin Popov, V. Yu. Bychenkov
Software Mentions: 1
Published: over 6 years ago